NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F069061

Metagenome / Metatranscriptome Family F069061

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069061
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 65 residues
Representative Sequence MVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGKYMSRPRDGRTKNWDLFTRP
Number of Associated Samples 107
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 27.42 %
% of genes near scaffold ends (potentially truncated) 20.97 %
% of genes from short scaffolds (< 2000 bps) 70.97 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.161 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(25.806 % of family members)
Environment Ontology (ENVO) Unclassified
(41.935 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.161 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.33%    β-sheet: 30.00%    Coil/Unstructured: 56.67%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.3.4.1: Transthyretin (synonym: prealbumin)d1f86a_1f860.63343
b.1.20.1: Tp47 lipoprotein, middle and C-terminal domainsd1o75a11o750.6187
b.1.2.0: automated matchesd4eq3a14eq30.61479
b.45.1.1: PNP-oxidase liked6h00a_6h000.61314
b.45.1.1: PNP-oxidase liked4hmsa_4hms0.60969

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF00353HemolysinCabind 12.10
PF00487FA_desaturase 5.65
PF00296Bac_luciferase 4.84
PF04226Transgly_assoc 3.23
PF00534Glycos_transf_1 2.42
PF03364Polyketide_cyc 2.42
PF00578AhpC-TSA 2.42
PF02771Acyl-CoA_dh_N 2.42
PF10604Polyketide_cyc2 2.42
PF13411MerR_1 1.61
PF03009GDPD 1.61
PF01345DUF11 1.61
PF09278MerR-DNA-bind 1.61
PF12680SnoaL_2 1.61
PF00440TetR_N 1.61
PF08281Sigma70_r4_2 1.61
PF13784Fic_N 0.81
PF02661Fic 0.81
PF02780Transketolase_C 0.81
PF05974DUF892 0.81
PF12464Mac 0.81
PF03460NIR_SIR_ferr 0.81
PF08534Redoxin 0.81
PF04828GFA 0.81
PF02645DegV 0.81
PF13649Methyltransf_25 0.81
PF01553Acyltransferase 0.81
PF07883Cupin_2 0.81
PF14026DUF4242 0.81
PF00584SecE 0.81
PF00378ECH_1 0.81
PF02566OsmC 0.81
PF04229GrpB 0.81
PF10027DUF2269 0.81
PF13298LigD_N 0.81
PF13602ADH_zinc_N_2 0.81
PF04075F420H2_quin_red 0.81
PF00127Copper-bind 0.81
PF00856SET 0.81
PF13489Methyltransf_23 0.81
PF09992NAGPA 0.81
PF04255DUF433 0.81
PF00072Response_reg 0.81
PF01297ZnuA 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 5.65
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 5.65
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 4.84
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 3.23
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 2.42
COG0584Glycerophosphoryl diester phosphodiesteraseLipid transport and metabolism [I] 1.61
COG0789DNA-binding transcriptional regulator, MerR familyTranscription [K] 1.61
COG0690Preprotein translocase subunit SecEIntracellular trafficking, secretion, and vesicular transport [U] 0.81
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.81
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.81
COG2320GrpB domain, predicted nucleotidyltransferase, UPF0157 familyGeneral function prediction only [R] 0.81
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.81
COG2443Preprotein translocase subunit Sss1Intracellular trafficking, secretion, and vesicular transport [U] 0.81
COG3685Ferritin-like metal-binding protein YciEInorganic ion transport and metabolism [P] 0.81
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.16 %
UnclassifiedrootN/A4.84 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908028|beta3_all_NODE_161522_len_4497_cov_8_195019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4547Open in IMG/M
2124908044|A5_c1_ConsensusfromContig12038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae1327Open in IMG/M
2124908044|A5_c1_ConsensusfromContig60083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1002Open in IMG/M
2140918007|ConsensusfromContig13041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae1327Open in IMG/M
2170459010|GIO7OMY01EDS55All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium515Open in IMG/M
3300000546|LJNas_1013173All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300001161|JGI12135J13285_100770All Organisms → cellular organisms → Bacteria1695Open in IMG/M
3300001405|JGI20186J14852_1000960All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2189Open in IMG/M
3300001546|JGI12659J15293_10102195All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300003992|Ga0055470_10236509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium507Open in IMG/M
3300004114|Ga0062593_102851173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium552Open in IMG/M
3300004157|Ga0062590_101185971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium743Open in IMG/M
3300004643|Ga0062591_101260569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium724Open in IMG/M
3300004643|Ga0062591_102240517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium569Open in IMG/M
3300005148|Ga0066819_1003573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria894Open in IMG/M
3300005148|Ga0066819_1010986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium653Open in IMG/M
3300005163|Ga0066823_10060854All Organisms → cellular organisms → Bacteria → Terrabacteria group704Open in IMG/M
3300005329|Ga0070683_100035932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4532Open in IMG/M
3300005335|Ga0070666_11330132All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium536Open in IMG/M
3300005337|Ga0070682_100217677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1357Open in IMG/M
3300005355|Ga0070671_100454897All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300005356|Ga0070674_100954113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria750Open in IMG/M
3300005356|Ga0070674_101126002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium694Open in IMG/M
3300005367|Ga0070667_101708648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium592Open in IMG/M
3300005435|Ga0070714_100206265All Organisms → cellular organisms → Bacteria1800Open in IMG/M
3300005438|Ga0070701_11403928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium502Open in IMG/M
3300005471|Ga0070698_101734150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium577Open in IMG/M
3300005587|Ga0066654_10000173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria14402Open in IMG/M
3300005718|Ga0068866_10091168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1660Open in IMG/M
3300005840|Ga0068870_10353753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium943Open in IMG/M
3300005841|Ga0068863_100038195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4569Open in IMG/M
3300006034|Ga0066656_10400147All Organisms → cellular organisms → Bacteria → Terrabacteria group889Open in IMG/M
3300006178|Ga0075367_10329697All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300006576|Ga0074047_11181348All Organisms → cellular organisms → Bacteria → Terrabacteria group797Open in IMG/M
3300006577|Ga0074050_10560069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium516Open in IMG/M
3300006580|Ga0074049_12159717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales614Open in IMG/M
3300006606|Ga0074062_11860978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium597Open in IMG/M
3300006640|Ga0075527_10224838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium544Open in IMG/M
3300006881|Ga0068865_100325376Not Available1238Open in IMG/M
3300006953|Ga0074063_10116983All Organisms → cellular organisms → Bacteria → Terrabacteria group1534Open in IMG/M
3300007076|Ga0075435_101533795All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300009093|Ga0105240_10227370All Organisms → cellular organisms → Bacteria2170Open in IMG/M
3300009553|Ga0105249_10902525Not Available951Open in IMG/M
3300009789|Ga0126307_10155360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1832Open in IMG/M
3300009840|Ga0126313_11789817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium514Open in IMG/M
3300010040|Ga0126308_10994947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium587Open in IMG/M
3300010371|Ga0134125_10636815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1178Open in IMG/M
3300012005|Ga0120161_1016938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3096Open in IMG/M
3300012011|Ga0120152_1001809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10873Open in IMG/M
3300012212|Ga0150985_102890181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria765Open in IMG/M
3300012469|Ga0150984_112405990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria894Open in IMG/M
3300012929|Ga0137404_11087951All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300012929|Ga0137404_11722719Not Available582Open in IMG/M
3300012943|Ga0164241_10009230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8543Open in IMG/M
3300012944|Ga0137410_10404181All Organisms → cellular organisms → Bacteria → Terrabacteria group1101Open in IMG/M
3300012951|Ga0164300_10629482All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300012957|Ga0164303_10986748All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300012958|Ga0164299_11095963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium595Open in IMG/M
3300012987|Ga0164307_10384885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1029Open in IMG/M
3300012989|Ga0164305_11590530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium583Open in IMG/M
3300013296|Ga0157374_11772657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium642Open in IMG/M
3300013308|Ga0157375_11188652All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300013308|Ga0157375_12350189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei636Open in IMG/M
3300014325|Ga0163163_10350348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1533Open in IMG/M
3300014325|Ga0163163_11882746Not Available658Open in IMG/M
3300014498|Ga0182019_10132414All Organisms → cellular organisms → Bacteria1563Open in IMG/M
3300014968|Ga0157379_12273020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium540Open in IMG/M
3300015085|Ga0167632_1003756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2247Open in IMG/M
3300015374|Ga0132255_103946045All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300017792|Ga0163161_10906589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium747Open in IMG/M
3300018422|Ga0190265_12441683All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium622Open in IMG/M
3300018422|Ga0190265_12911313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium572Open in IMG/M
3300018429|Ga0190272_11991562All Organisms → cellular organisms → Bacteria → Terrabacteria group615Open in IMG/M
3300018431|Ga0066655_10175758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1299Open in IMG/M
3300018432|Ga0190275_10000713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria27073Open in IMG/M
3300018432|Ga0190275_10008648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7446Open in IMG/M
3300018432|Ga0190275_10023236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4850Open in IMG/M
3300018469|Ga0190270_10475436All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300018476|Ga0190274_10000442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria25378Open in IMG/M
3300018476|Ga0190274_10000468All Organisms → cellular organisms → Bacteria24592Open in IMG/M
3300018476|Ga0190274_10004181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8622Open in IMG/M
3300018481|Ga0190271_10000001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria460146Open in IMG/M
3300018481|Ga0190271_10019742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5157Open in IMG/M
3300019361|Ga0173482_10326221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria686Open in IMG/M
3300019377|Ga0190264_10000307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8500Open in IMG/M
3300019881|Ga0193707_1008012All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3619Open in IMG/M
3300019889|Ga0193743_1030330All Organisms → cellular organisms → Bacteria2602Open in IMG/M
3300020020|Ga0193738_1032731All Organisms → cellular organisms → Bacteria1608Open in IMG/M
3300020034|Ga0193753_10077497All Organisms → cellular organisms → Bacteria1705Open in IMG/M
3300021181|Ga0210388_11387356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium590Open in IMG/M
3300021339|Ga0193706_1000550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia21148Open in IMG/M
3300021339|Ga0193706_1009028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3517Open in IMG/M
3300021339|Ga0193706_1073643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria936Open in IMG/M
3300021363|Ga0193699_10018423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2535Open in IMG/M
3300021401|Ga0210393_10617469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria885Open in IMG/M
3300021415|Ga0193694_1000545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia5137Open in IMG/M
3300021559|Ga0210409_10063815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3437Open in IMG/M
3300025504|Ga0208356_1000003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia183985Open in IMG/M
3300025899|Ga0207642_10914639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium562Open in IMG/M
3300025900|Ga0207710_10383600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria719Open in IMG/M
3300025900|Ga0207710_10631596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium560Open in IMG/M
3300025920|Ga0207649_10185856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1458Open in IMG/M
3300025929|Ga0207664_10338089All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300025934|Ga0207686_10000394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria30367Open in IMG/M
3300025937|Ga0207669_11194123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium644Open in IMG/M
3300025938|Ga0207704_10275647Not Available1276Open in IMG/M
3300026088|Ga0207641_10028930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4581Open in IMG/M
3300026319|Ga0209647_1036997All Organisms → cellular organisms → Bacteria2779Open in IMG/M
3300026855|Ga0208404_1004517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium574Open in IMG/M
3300027310|Ga0207983_1038978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium609Open in IMG/M
3300027524|Ga0208998_1000015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia69769Open in IMG/M
3300027524|Ga0208998_1048771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium689Open in IMG/M
3300027636|Ga0214469_1072161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1041Open in IMG/M
3300027669|Ga0208981_1094942All Organisms → cellular organisms → Bacteria → Terrabacteria group760Open in IMG/M
3300027815|Ga0209726_10132718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1427Open in IMG/M
3300027895|Ga0209624_10055619All Organisms → cellular organisms → Bacteria2537Open in IMG/M
3300028556|Ga0265337_1000577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria19283Open in IMG/M
3300028563|Ga0265319_1135214All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300028710|Ga0307322_10011305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1979Open in IMG/M
3300028802|Ga0307503_10000014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria207312Open in IMG/M
3300031200|Ga0307496_10103863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium557Open in IMG/M
3300031456|Ga0307513_10557222All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300034125|Ga0370484_0008747Not Available2120Open in IMG/M
3300034965|Ga0370497_0001140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4529Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil25.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.06%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil3.23%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.42%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.42%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.42%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.61%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.61%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.61%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.81%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.81%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908028Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
2124908044Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5EnvironmentalOpen in IMG/M
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300000546Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300001161Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2EnvironmentalOpen in IMG/M
3300001405Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012EnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300003992Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005148Soil and rhizosphere microbial communities from Laval, Canada - mgLMAEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006640Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11BEnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300012005Permafrost microbial communities from Nunavut, Canada - A15_80cm_0MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015085Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300020020Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021415Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1EnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025504Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026855Soil and rhizosphere microbial communities from Laval, Canada - mgLMA (SPAdes)EnvironmentalOpen in IMG/M
3300027310Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)EnvironmentalOpen in IMG/M
3300027524Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027636Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeqEnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300028556Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaGHost-AssociatedOpen in IMG/M
3300028563Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaGHost-AssociatedOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300034125Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15EnvironmentalOpen in IMG/M
3300034965Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
beta3_all_004701002124908028SoilMVFDFRHKNVEGKWKASGHRKGLTRDAAFASLEERNGRMPAGRYMSRPRDGRTTNWDLFTRP
A5_c1_005703302124908044SoilMVFDFRHKNIEGHWKSSGHRKGLTRDAAFAALEEKDGPMPAGRYMSRPRDGRTKNWDLFTRP
A5_c1_015088702124908044SoilLKSTTLGAGIGYRRGMVFDFRHKNREGHWKSSGHRKGVDRDAAFASLEEKFGPMPAGRYMSRPRDGRTRDWEPFTRP
A_all_C_011878102140918007SoilMVFDFRHKNIEGQWKSSGHRKGLTRDAAFAALEEKDGPMPAGRYMSRPRDGRTKNWDLFTRP
F62_075195102170459010Grass SoilIGYRQCMVFDFRYKSVSGQWKSSGHRKGDTRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP
LJNas_101317313300000546Quercus RhizosphereVIFDFRHKNHEGKWKSSGHRKGDTRDAAFAALEAKNGPLPAGQYMSRPRDGRTKNWELFTRP*
JGI12135J13285_10077033300001161Forest SoilMACERAGTTVTAAIGYRQSMVFDFRYKSISGQWKSSGHRKGETRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP*
JGI20186J14852_100096023300001405Arctic Peat SoilMVFDFRHKNISGQWKSSGHRKGDTRDAAFAALEAKVGPLPSGKYMSRPRDGRTKNWDLFTRP*
JGI12659J15293_1010219523300001546Forest SoilMVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKTGPLPPGKYMSRPRDGRTKNWDLFTRP*
Ga0055470_1023650913300003992Natural And Restored WetlandsMGYGQRMIFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGQYMSRPRDGRTKNWDLFTRP*
Ga0062593_10285117323300004114SoilERRFPSMVFDFRHKNADGKWRSSGYRKGDTRDQAFASLEAKEGPMPSGRYMSRPRDGRTKNWTPFTRP*
Ga0062590_10118597123300004157SoilMVFDFRHKNADGKWRSSGYRKGDTRDQAFASLEAKEGPMPSGRYMSRPRDGRTKDWTPFTRP*
Ga0062591_10126056913300004643SoilGKWRSSGYRKGDTRDAAFASLEAKEGPMPAGRYMSRPRDGRTKDWTPFTRP*
Ga0062591_10224051723300004643SoilMVFDFRHKNADGKWRSSGYRKGDTRDQAFASLEAKEGPMPSGRYMSRPRDGRTKNWTPFTRP*
Ga0066819_100357323300005148SoilMVFDFRHKNVEGKWKSSGHRKGLTRDAAFASLEEMNGQMPAGRYMSRPRDGKTRDWDLFTRP*
Ga0066819_101098613300005148SoilMVFDFRHKNVEGKWKASGHRKGLTRDDAFASLVERNGRMPAGRYMSRPRDGKTKDWDLFTRP*
Ga0066823_1006085423300005163SoilDFRHKNVEGKWKASGHRKGLTRDDAFASLVERNGRMPAGRYMSRPRDGKTKDWDLFTRP*
Ga0070683_10003593253300005329Corn RhizosphereMVFDFRHKSADGKWRSSGYRKGDTRDAAFASLEAKKGPMPPGRYMSRPRDGRTKDWTPFTRP*
Ga0070666_1133013213300005335Switchgrass RhizosphereMVFDFRHKNIEGKWKSSGHRKGVDRDAAFASLQEKYGPMPSGSYMSRPRDGRTKNWDLFTHHPEPAEQVSSPR*
Ga0070682_10021767723300005337Corn RhizosphereVIFDFRHKNSEDKWKSSGHRKGETRDAAFAALEAKHGPLPSGQYMSRPRDGRTKNWDLFTRP*
Ga0070671_10045489733300005355Switchgrass RhizosphereMVFDFRHKNIEGKWKSSGHRKGVDRDAAFASLQEKYGPMPSGSYMSRPRDGRTKNWDLFTHHPEPAEQVSSQR*
Ga0070674_10095411313300005356Miscanthus RhizosphereMVFDFRHKNTEGKWRSSGYRKGDTRDAAFASLEAKEGPMPPGRYMSRPRDGRTKNWTPFTRP*
Ga0070674_10112600223300005356Miscanthus RhizosphereTVVGRGLRRAQPIERRFPSMVFDFRHKNAEGKWRSSGYRKGDTRDEAFASLEAKEGPMPSGRYMSRPRDGRTKDWTPFTRP*
Ga0070667_10170864823300005367Switchgrass RhizosphereVIFDFRHKNAEGKWKSNGHRKGETRDAAFAALEAKHGPFPAGQYMSRPRDGRTKNWDLFTRP*
Ga0070714_10020626523300005435Agricultural SoilMIFDFRYKNGEGKWKSSGHRKGDTRDAAFAALEAKNGPLPAGQYMSRPRDGRTKNWDLFTRP*
Ga0070701_1140392813300005438Corn, Switchgrass And Miscanthus RhizosphereGSPAMVFDFRHKNTEGKWRSSGYRKGDTRDAAFASLEAKEGPMPPGRYMSRPRDGRTKNWTPFTRP*
Ga0070698_10173415013300005471Corn, Switchgrass And Miscanthus RhizosphereMVFDFRHKNSEGKWRSSGYRKGDTRDAAFASLEAKEGPMPSGRYMSRPRDG
Ga0066654_1000017323300005587SoilMVFDFRHKNIEGKWKASGHHKGLTRDAAFASLEERNGHMPAGRYMSRPRDGKTRDWDLFTRP*
Ga0068866_1009116823300005718Miscanthus RhizosphereMVFDFRYKSVSGQWKSSGHRKGETRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP*
Ga0068870_1035375313300005840Miscanthus RhizosphereMVFDFRHKNADGKWRSSGYRKGDTRDAAFASLEAKEGPMPLGRYMSRPRDGRTKNWTPFTRP*
Ga0068863_10003819573300005841Switchgrass RhizosphereMVFDFRYKSPTGQWKSSGHRKGDTRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP*
Ga0066656_1040014713300006034SoilRHKNIEGKWKASGHHKGLTRDAAFASLEERNGHMPAGRYMSRPRDGKTRDWDLFTRP*
Ga0075367_1032969723300006178Populus EndosphereMSMVYDFRHKTVDGKWRSSGFRKGESRDAAFASLEAKKGPMPPGRYMSRPRDGRTKNWTPFTRP*
Ga0074047_1118134823300006576SoilMVFDFRHKNVEGKWKSSGHRKGLTRDAAFASLEEMNGHMPAGRYMSRPRDGKTRDWDLFTRP*
Ga0074050_1056006913300006577SoilLSKTAIRYGPRMVFDFRHKNIEGKWKSSGHRKGLTRDAAFASLEEMNGHMPAGRYMSRPRNGKTRDWDLFTRP*
Ga0074049_1215971723300006580SoilLSKTAIRYGPRMVFDFRHKNIEGKWKSSGHRKGDNRDAAFAALEAKVGPLPPGKYMSRPRDGRTKNWDLFTRP*
Ga0074062_1186097823300006606SoilMVFDFRHKNVEGKWKASGHRKGLTRDDAFASLVERNGRMPAGRYMSRPRDGKT
Ga0075527_1022483813300006640Arctic Peat SoilIDEPSSGHRRVSATVSAMVFDFRHKNVEGHWKASGHRKGLTRDAAFTSLEEKNGPMPTGRYMSRPRDGRTKNWDLFTRP*
Ga0068865_10032537623300006881Miscanthus RhizosphereVIFDFRHKNNEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGQYMSRPRDGRTKNWDLFTRS*
Ga0074063_1011698323300006953SoilMVFDFRHKNVEGKWKSSGHRKGLTRDAAFASLEEMNGQMPAGRYMSRPRDGKT
Ga0075435_10153379523300007076Populus RhizosphereMVFDFRHKNADGKWRSSGYRKGDTRDAAFASLEAKEGPMPSGRYMSRPRDGRTKDWTPFTRP*
Ga0105240_1022737043300009093Corn RhizosphereMVFDFRYKSATGQWKSSGHRKGDTRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFT
Ga0105249_1090252513300009553Switchgrass RhizosphereMVFDFRHKNIEGKWKSSGHRKGVDRDAAFASLQEKYGPMPSGSYMSRPRDGRTKNWDLFTHHPEPAEQISSPR*
Ga0126307_1015536023300009789Serpentine SoilMVFDFRHKNTDGKWRSSGFRKGDTRDAAFAALEAKKGPMPPGRYMSRPRDGRTKDWTPFTRP*
Ga0126313_1178981713300009840Serpentine SoilVTAAIGYRHPMVFDFRYKSVSGQWKSSGHRKGETRDAAFAALEAKNGPMPAGQYMSRPRDGRTKNWDLFTRP*
Ga0126308_1099494723300010040Serpentine SoilMVFDFRHKSADGKWRSSGFRKGDTRDAAFAALEAKQGPMPPGRYMSRPRDGRTKDWTPFTRP*
Ga0134125_1063681523300010371Terrestrial SoilMVFDFRHKNIEGKWKSSGHRKGDNRDAAFAALEAKVGPLPPGKYMSRPRDGRTKNWDLFTRP*
Ga0120161_101693813300012005PermafrostMVFDFRHKNVEGKWKASGHRKGLTRDAAFASLEEKDGRMPAGRYMSRPRDGRTKNWDL
Ga0120152_1001809103300012011PermafrostMVFDFRHKNVEGKWKASGHRKGLTRDAAFASLEERNGRMPAGRYMSRPRDGRTKNWDLFTRP*
Ga0150985_10289018133300012212Avena Fatua RhizosphereDFRHKNIEGKWKSSGHRKGETRDAAFAALDAKSGPLPPGQYMSRPRDGRTKNWDLFTRP*
Ga0150984_11240599013300012469Avena Fatua RhizosphereMVFDFRHKNIEGKWKSSGHRKGETRDAAFAALDAKSGPLPPGQYMSRPRDGRTKNWDLFTRP*
Ga0137404_1108795113300012929Vadose Zone SoilVEGKWKASGHRKGLTRDAAFASLEEKNGHMPAGRYMSRPRDGRTKNWDLFTRP*
Ga0137404_1172271923300012929Vadose Zone SoilMVYDFRHKNNEGKWRSSGHRKGVDRDAAFAALEEKVGPLPSGRYMSRPRDGRTKNWDLFTRP*
Ga0164241_1000923063300012943SoilMIFDFRHKNVEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGEYMSRPRDGRTKNWDLFTRP*
Ga0137410_1040418113300012944Vadose Zone SoilMVFDFRHKNVEGKWKASGHCKGLTRDAAFTALEERNGHMPAGRYMSRPRDGKARDWDLFTRP*
Ga0164300_1062948213300012951SoilRVKTVSIARIGYGRCVIFDFRHKNVEGKWRSSGFRKGIDRDAAFASLEEKNGPMPSGRYMSRPRDGRTKNWDLFTRP*
Ga0164303_1098674823300012957SoilMVFDFRHKNAEGKWRSSGYRKGDTRDAAFASLEAKEGPMPSGRYMSRPRDGRTKNWTPFTRP*
Ga0164299_1109596313300012958SoilSSAALVALNPMERRFPSMVFDFRHKSADGKWRSSGYRKGDTRDAAFASLEAKEGPMPSGRYMSRPRDGRTKNWTPFTRP*
Ga0164307_1038488523300012987SoilMVFDFRHKNGTGQWKSSGHRKGVDRDAAFASLEEKYGPLPAGRYMSRPRDGRTKNWDLFTRP*
Ga0164305_1159053023300012989SoilMVFDFRHKNVEGKWKASGHRKGDTRDAAFASLEEKQGPMPAGRYMSRPRDGRSKNWDLFTRP*
Ga0157374_1177265723300013296Miscanthus RhizosphereLYKALIDYRQGMVFDFRYKSATGQWKSSGHRKGDTRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP*
Ga0157375_1118865213300013308Miscanthus RhizosphereMVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGKYMSRPRDGRTKNWDLFTRP*
Ga0157375_1235018923300013308Miscanthus RhizosphereVAKVIFDFRYKNPDGKWKSSGHCKGATRDAAFDTLEQKAGGVPEGRYMSRPRDGHARDWDLFTWPREPAGD*
Ga0163163_1035034823300014325Switchgrass RhizosphereMVFDFRHKNADGKWRSSGYRKGDTRDAAFASLEAKEGPLPSGRYMSRPRDGRTKDWTPFTRP*
Ga0163163_1188274613300014325Switchgrass RhizosphereMVFDFRHKNVAGQWKSSGHRKGDTRDAAFAALEAKNGPMPPGRYMSRPRDGRTKNWDLFTRP*
Ga0182019_1013241433300014498FenMVFDFRHKTISGQWKSSGHRKGDTRDAAFAALEAKVGPLPSGRYMSRPRDGRTKNWDLFTRP*
Ga0157379_1227302013300014968Switchgrass RhizosphereMVFDFRHKNAEGKWRSSGYRKGDTRDAAFASLEAKEGPLPSGRYMSRPRDGRTKDWTPFTRP*
Ga0167632_100375633300015085Glacier Forefield SoilMVFDFRHKNVAGQWKASGHRKGLTRDAAFASLEERNGRMPAGRYMSRPRDGKTRDWDLFTRP*
Ga0132255_10394604523300015374Arabidopsis RhizosphereMVYDFRHKSVSGQWKSSGHRKGDTRDLAFAALEAKQGPMPSGKYMSRPRDGRTKNWEVFTRP*
Ga0163161_1090658913300017792Switchgrass RhizosphereQLLATVNPMVFDFRHKNVAGQWKASGHRKGLTRDAAFASLVERNGHMPTGRYMSRPRDGKTRDWDLFTRP
Ga0190265_1244168323300018422SoilHGQASATVDPMVFDFRHKNIEGKWKASGHRKGLTRDAAFASLEERNGHMPAGRYMSRPRDGKTRDWDLFTRP
Ga0190265_1291131323300018422SoilMSMVFDFRHKAADGKWRSSGFRKGDTRDAAFASLEAKKGPLPPGRYMSRPRDGRTKNWTPFTRP
Ga0190272_1199156213300018429SoilMSMVFDFRHKTADGKWRSSGFRKGDTRDAAFASLEAKKGPMPPGRYMSRPRDGRTKNWTPFTRP
Ga0066655_1017575823300018431Grasslands SoilMVFDFRHKNIEGKWKASGHHKGLTRDAAFASLEERNGHMPAGRYMSRPRDGKTRDWDLFTRP
Ga0190275_10000713283300018432SoilMIFDFRHKNTEGKWKSTGHRKGDTRDAAFAALDAKNGPLPPGQYMSRPRDGRTKNWDLFTRP
Ga0190275_1000864863300018432SoilMARWPRTAAPRAAISVTVVAMVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALDAKTGPLPPGKYMSRPRDGRTKNWDLFTRP
Ga0190275_1002323623300018432SoilMARRPRTAAPQAAISVTVIAMVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALDAKTGPLPPGKYMSRPRDGRTKNWDLFTRP
Ga0190270_1047543623300018469SoilMVYGHSMVYDFRHKDATGKWRSSGHRKGLTRDAAFASLEDKNGPLPSGRYMSRPRDGRTKNWDLFTRP
Ga0190274_10000442263300018476SoilMTRPDAPKARRSARIGTVLAMVFDFRHKNNEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGDYMSRPRDGRTKNWDLFTRP
Ga0190274_10000468223300018476SoilMVFDFRYKNVEGKWKSSGHRKGLTRDAAFASLEERNGHMPPGRYMSRPRDGKTRDWDLFTRP
Ga0190274_1000418123300018476SoilMVFDFRHKNVEGKWKASGHRKGLTRDAAFAALEERNGHMPAGRYMSRPRDGKTRDWDLFTRP
Ga0190271_100000012953300018481SoilMLYGHPMVYDFRHKDASGKWRSSGHRKGLTRDAAFASLEEKNGPLPPGQYMSRPRDGRTKNWDLFTRP
Ga0190271_1001974223300018481SoilMIFDFRHKNSEGKWKSTGHRKGDTRDAAFAALDAKNGPLPPGQYMSRPRDGRTKNWDLFTRP
Ga0173482_1032622123300019361SoilVIFDFRHKNAEGKWKSNGHRKGETRDAAFAALEAKHGPFPAGQYMSRPRDGRTKNWDLFTRP
Ga0190264_1000030763300019377SoilMIFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGKYMSRPRDGRTKNWDLFTRP
Ga0193707_100801253300019881SoilMVFDFRHKNVEGKWKASGHCKGLTRDAAFTALEERNGHMPAGRYMSRPRDGKARDW
Ga0193743_103033043300019889SoilRCMVFDFRHKNIEGKWKSSGHRKGETRDAAFAALEAKTGPLPSGQYMSRPRDGRTKNWDLFTRP
Ga0193738_103273113300020020SoilFDFRHKNVEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGKYMSRPRDGRTKNWDLFTRP
Ga0193753_1007749733300020034SoilMVFDFRHKSVTGQWRSSGHRKGVDRDAAFAALEEKKGPMPAGRYMSRPRDGRTKNWDLFTRP
Ga0210388_1138735613300021181SoilFRYKSVSGQWKSSGHRKGDTRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP
Ga0193706_1000550163300021339SoilVIFDFRHKNIEGKWKSSGHRKGETRDAAFAALEAKTGPLPSGQYMSRPRDGRTKNWELFTRP
Ga0193706_100902873300021339SoilMVFDFRHKDIEGKWKSSGHRKGDTRDAAFAALEAKNGPLPPGRYMSRPRDGRTKNWDL
Ga0193706_107364323300021339SoilMAMVFDFKHKDINGHWKSSGHRKGLTRDAAFASLEAKVGPLPSGRYMSRPRDGRTKNWDLFTRP
Ga0193699_1001842353300021363SoilMVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGKYMSRPRDGRTKNWDLFTRP
Ga0210393_1061746923300021401SoilMVFDFRHKTISGQWKSSGHRKGDTRDAAFAALEAKVGPLPSGKYMSRPRDGRTKNWDLFTRP
Ga0193694_100054523300021415SoilMVFDFRYKNSEGKWRSSGHRKGLDRDAAFAALEQKNGPLPAGQYMSRPRDGRTKNWDLFTRP
Ga0210409_1006381533300021559SoilMVFDFRHKNVEGKWKSSGHRKGLTREAAFASLEERDGRMPVGRYMSRPRDGRTKNWDLFTRP
Ga0208356_1000003913300025504Arctic Peat SoilMVFDFRHKNISGQWKSSGHRKGDTRDAAFAALEAKVGPLPSGKYMSRPRDGRTKNWDLFTRP
Ga0207642_1091463923300025899Miscanthus RhizosphereMVFDFRHKNTEGKWRSSGYRKGDTRDAAFASLEAKEGPMPPGRYMSRPRDGRTKNWTPFTRP
Ga0207710_1038360023300025900Switchgrass RhizosphereMVFDFRHKNIEGKWKSSGHRKGVDRDAAFASLQEKYGPMPSGSYMSRPRDGRTKNWDLFTHHPEPAEQVSSQR
Ga0207710_1063159623300025900Switchgrass RhizosphereMVFDFRHKNAEGKWRSSGYRKGDTRDAAFASLEAKEGPMPSGRYMSRPRDGRTKNWTPFTRP
Ga0207649_1018585633300025920Corn RhizosphereMVFDFRHKSADGKWRSSGYRKGDTRDAAFASLEAKKGPMPPGRYMSRPRDGRTKDWTPFTRP
Ga0207664_1033808923300025929Agricultural SoilMIFDFRYKNGEGKWKSSGHRKGDTRDAAFAALEAKNGPLPAGQYMSRPRDGRTKNWDLFTRP
Ga0207686_10000394133300025934Miscanthus RhizosphereMVFDFRYKSVSGQWKSSGHRKGETRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP
Ga0207669_1119412323300025937Miscanthus RhizosphereMVFDFRHKNAEGKWRSSGYRKGDTRDEAFASLEAKEGPMPSGRYMSRPRDGRTKDWTPFTRP
Ga0207704_1027564723300025938Miscanthus RhizosphereVIFDFRHKNNEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGQYMSRPRDGRTKNWDLFTRS
Ga0207641_1002893033300026088Switchgrass RhizosphereMVFDFRYKSPTGQWKSSGHRKGDTRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP
Ga0209647_103699723300026319Grasslands SoilMVFDFRHKGGSGQWKSSGHRKGDTRDAAFAALEAKNGPMPAGRYMSRPRDGRTKNWDLFTRP
Ga0208404_100451713300026855SoilMVFDFRHKNVEGKWKSSGHRKGLTRDAAFASLEEMNGQMPAGRYMSRPRDGKTRDWDLFTRP
Ga0207983_103897813300027310SoilMVFDFRHKNVEGKWKASGHRKGLTRDDAFASLVERNGRMPAGRYMSRPRDGKTKDWDLFTRP
Ga0208998_1000015563300027524Forest SoilMACERAGTTVTAAIGYRQSMVFDFRYKSISGQWKSSGHRKGETRDAAFAALEAKNGPMPAGKYMSRPRDGRTKNWDLFTRP
Ga0208998_104877123300027524Forest SoilMRVVRGSLASIGYGQGMVFDFRHKNVEGKWKSSGHRKGLTRDAAFASLEEMNGHMPAGRYMSRPRDGKTRDWDLFTRP
Ga0214469_107216113300027636SoilMVFDFRHKNVEGKWKASGHRKGLTRDAAFASLEERDGHMPAGRYMSRPRDGKTRDWDLFTRP
Ga0208981_109494213300027669Forest SoilRGSLASIGYGHPMVFDFRHKNVAGHWKASGHRKGLTRDAAFASLEERNGHMPAGRYMSRPRDGKTRDWDLFTRP
Ga0209726_1013271813300027815GroundwaterGRCMVFDFRHKNIEGKWKSSGHRKGADRDAAFASLQEKYGPMPSGAYMSRPRDGRTKNWDLFTHQPESAEQAPSRQ
Ga0209624_1005561943300027895Forest SoilMVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKTGPLPPGKYMSRPRDGRTKNWDLFTRP
Ga0265337_1000577103300028556RhizosphereVIFDFKHKNADGKWESSGHHKGLTKDAAFASLEEKNGPMPSGRYMSRPRDGRSKNWDLFTRP
Ga0265319_113521423300028563RhizosphereMVFDFRHKTISGQWKSSGHRKGDTRDAAFAALEAKVGPLPSGRYMSRPRDGRTKNWDLFTRP
Ga0307322_1001130543300028710SoilMVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKFGPLPPGSYMSRPRDGRTKNWDLFTRP
Ga0307503_10000014523300028802SoilMVFDFRHKNVEGKWKASGHRKGLTRDAAFASLEERNGHMPAGRYMSRPRDGKTKNWDLFTRP
Ga0307496_1010386323300031200SoilMVFDFRHKNIEGKWKSSGHRKGTDRDAAFASLQEKYGPMPSGRYMSRPRDGRTKNWDLFTHQPEPAEQAPSRR
Ga0307513_1055722223300031456EctomycorrhizaLSKPSIRYGPRMVFDFRHKNIEGKWKSSGHRKGDTRDAAFAALEAKVGPLPPGKYMSRPRDGRTKNWDLFTRP
Ga0370484_0008747_1252_14403300034125Untreated Peat SoilMVFDFRHKNVEGKWKTSGHRKGLTRDAAFASLEEKDGRMPAGRYMSRPRDGRTKNWDLFTRP
Ga0370497_0001140_976_12093300034965Untreated Peat SoilVAVRGSSASIGYGRLMVFDFRHKNVEGKWKSSGHHKGLTRDAAFASLEERNGHMPAGRYMSRPRDGKSRDWDLFTRP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.