Metagenome / Metatranscriptome Family F069033

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069033
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	88 residues
Representative Sequence	MNKNGMTDVGSAAQGVDDKIDSLKETVKGIVDQGAQKVDAIKTKVVEAKDQAFHRGSDVIERMTDLIKAHPIKAVGIAFGAGYLGMRLFRR
Number of Associated Samples	80
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.10 %
% of genes near scaffold ends (potentially truncated)	21.77 %
% of genes from short scaffolds (< 2000 bps)	81.45 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.677 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.226 % of family members)
Environment Ontology (ENVO)	Unclassified (34.677 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.323 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.71% β-sheet: 0.00% Coil/Unstructured: 35.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07332	Phage_holin_3_6	25.81
PF00069	Pkinase	16.13
PF02622	DUF179	2.42
PF00072	Response_reg	0.81
PF07238	PilZ	0.81
PF00498	FHA	0.81
PF02954	HTH_8	0.81
PF07366	SnoaL	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	64.52
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	2.42

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.61 %
Unclassified	root	N/A	15.32 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	71.77 %
Unclassified	root	N/A	15.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.61 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	71.77 %
Unclassified	root	N/A	15.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.61 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	62.10 %
Unclassified	root	N/A	15.32 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.61 %
Aurantimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae	1.61 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	62.10 %
Unclassified	root	N/A	15.32 %
Aurantimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas	1.61 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.61 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	62.10 %
Unclassified	root	N/A	15.32 %
Aurantimonas coralicida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	1.61 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.61 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003162\|Ga0006778J45830_1037756	All Organisms → cellular organisms → Bacteria → Proteobacteria	1688	Open in IMG/M
3300003162\|Ga0006778J45830_1046890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300003571\|Ga0007419J51692_1046887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	836	Open in IMG/M
3300003735\|Ga0006780_1037280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	871	Open in IMG/M
3300004643\|Ga0062591_100999792	Not Available	795	Open in IMG/M
3300004798\|Ga0058859_11584682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300004798\|Ga0058859_11621290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300004798\|Ga0058859_11816151	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300004799\|Ga0058863_11175034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	537	Open in IMG/M
3300004801\|Ga0058860_12224555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	536	Open in IMG/M
3300005330\|Ga0070690_100005799	All Organisms → cellular organisms → Bacteria	6956	Open in IMG/M
3300005330\|Ga0070690_100252708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1247	Open in IMG/M
3300005334\|Ga0068869_100493573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1021	Open in IMG/M
3300005335\|Ga0070666_10857448	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005337\|Ga0070682_101663842	Not Available	553	Open in IMG/M
3300005340\|Ga0070689_100142437	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300005459\|Ga0068867_100381231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1184	Open in IMG/M
3300005466\|Ga0070685_11496392	Not Available	520	Open in IMG/M
3300005617\|Ga0068859_100823211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1015	Open in IMG/M
3300005764\|Ga0066903_100827746	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300005844\|Ga0068862_102049281	Not Available	583	Open in IMG/M
3300006028\|Ga0070717_10023294	All Organisms → cellular organisms → Bacteria	4905	Open in IMG/M
3300006048\|Ga0075363_100078096	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300006195\|Ga0075366_10935504	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300010047\|Ga0126382_10112067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1789	Open in IMG/M
3300010104\|Ga0127446_1101908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300010147\|Ga0126319_1358121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2487	Open in IMG/M
3300010337\|Ga0134062_10232263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300010397\|Ga0134124_11987369	Not Available	618	Open in IMG/M
3300010400\|Ga0134122_10797195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	901	Open in IMG/M
3300010401\|Ga0134121_10076901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2768	Open in IMG/M
3300011431\|Ga0137438_1008410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2898	Open in IMG/M
3300011438\|Ga0137451_1002323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5768	Open in IMG/M
3300011438\|Ga0137451_1055144	Not Available	1169	Open in IMG/M
3300011442\|Ga0137437_1001194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8912	Open in IMG/M
3300012212\|Ga0150985_105821536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1331	Open in IMG/M
3300012212\|Ga0150985_108733851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300012212\|Ga0150985_108933526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300012212\|Ga0150985_113118514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2446	Open in IMG/M
3300012212\|Ga0150985_117726061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300012228\|Ga0137459_1013348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2284	Open in IMG/M
3300012469\|Ga0150984_108189322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300012469\|Ga0150984_108406126	Not Available	568	Open in IMG/M
3300012469\|Ga0150984_109234757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2399	Open in IMG/M
3300012469\|Ga0150984_109572787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1790	Open in IMG/M
3300012469\|Ga0150984_115030120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1193	Open in IMG/M
3300012469\|Ga0150984_122006047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300012929\|Ga0137404_12142478	Not Available	522	Open in IMG/M
3300013297\|Ga0157378_10065067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3263	Open in IMG/M
3300013297\|Ga0157378_12063862	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300014166\|Ga0134079_10605760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300019232\|Ga0180114_1290581	Not Available	510	Open in IMG/M
3300019263\|Ga0184647_1525360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300019874\|Ga0193744_1018947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1280	Open in IMG/M
3300019880\|Ga0193712_1004571	All Organisms → cellular organisms → Bacteria	2817	Open in IMG/M
3300021286\|Ga0179583_1107630	Not Available	622	Open in IMG/M
3300021315\|Ga0179958_1029043	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	724	Open in IMG/M
3300021315\|Ga0179958_1092040	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300021951\|Ga0222624_1004086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300021951\|Ga0222624_1014020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300021951\|Ga0222624_1075844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300022499\|Ga0242641_1000688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1939	Open in IMG/M
3300022530\|Ga0242658_1101288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300022917\|Ga0247777_1223799	Not Available	606	Open in IMG/M
3300025903\|Ga0207680_11352738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300025927\|Ga0207687_10112656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2022	Open in IMG/M
3300025935\|Ga0207709_10492729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	955	Open in IMG/M
3300025936\|Ga0207670_10022467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3910	Open in IMG/M
3300025972\|Ga0207668_11656092	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	578	Open in IMG/M
3300026095\|Ga0207676_11033789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	810	Open in IMG/M
3300026118\|Ga0207675_100498324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1212	Open in IMG/M
3300028380\|Ga0268265_12454677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300028786\|Ga0307517_10126606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1860	Open in IMG/M
3300028794\|Ga0307515_10070126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4776	Open in IMG/M
3300028794\|Ga0307515_10523156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300030000\|Ga0311337_11560961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300030902\|Ga0308202_1019029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1058	Open in IMG/M
3300030902\|Ga0308202_1120698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300030905\|Ga0308200_1002349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2234	Open in IMG/M
3300030905\|Ga0308200_1025843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	973	Open in IMG/M
3300030905\|Ga0308200_1062552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	722	Open in IMG/M
3300030905\|Ga0308200_1069248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300030905\|Ga0308200_1115118	Not Available	588	Open in IMG/M
3300030905\|Ga0308200_1134352	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300030905\|Ga0308200_1167490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300030937\|Ga0138302_1215451	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	771	Open in IMG/M
3300030993\|Ga0308190_1024351	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1022	Open in IMG/M
3300030993\|Ga0308190_1041599	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	854	Open in IMG/M
3300030993\|Ga0308190_1051359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	797	Open in IMG/M
3300030993\|Ga0308190_1187433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300031058\|Ga0308189_10012307	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300031058\|Ga0308189_10015113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1707	Open in IMG/M
3300031058\|Ga0308189_10034155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1311	Open in IMG/M
3300031058\|Ga0308189_10101027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	914	Open in IMG/M
3300031058\|Ga0308189_10121168	Not Available	859	Open in IMG/M
3300031058\|Ga0308189_10310571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300031058\|Ga0308189_10404355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300031058\|Ga0308189_10426906	Not Available	554	Open in IMG/M
3300031082\|Ga0308192_1006653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1280	Open in IMG/M
3300031082\|Ga0308192_1016269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	928	Open in IMG/M
3300031082\|Ga0308192_1029849	Not Available	750	Open in IMG/M
3300031093\|Ga0308197_10087790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	895	Open in IMG/M
3300031093\|Ga0308197_10166844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	722	Open in IMG/M
3300031093\|Ga0308197_10227128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300031093\|Ga0308197_10319766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300031093\|Ga0308197_10343000	Not Available	566	Open in IMG/M
3300031093\|Ga0308197_10462812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300031096\|Ga0308193_1021666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300031200\|Ga0307496_10007442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1332	Open in IMG/M
3300031232\|Ga0302323_100078821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3117	Open in IMG/M
3300031422\|Ga0308186_1020066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300031446\|Ga0170820_10084760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	938	Open in IMG/M
3300031456\|Ga0307513_10041307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5092	Open in IMG/M
3300031474\|Ga0170818_103214696	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	938	Open in IMG/M
3300031507\|Ga0307509_10001723	All Organisms → cellular organisms → Bacteria → Proteobacteria	36447	Open in IMG/M
3300031616\|Ga0307508_10042166	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4095	Open in IMG/M
3300031730\|Ga0307516_10368725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1099	Open in IMG/M
3300031938\|Ga0308175_100000183	All Organisms → cellular organisms → Bacteria → Proteobacteria	49061	Open in IMG/M
3300032205\|Ga0307472_101502795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300032205\|Ga0307472_102171239	Not Available	560	Open in IMG/M
3300034268\|Ga0372943_0030000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2947	Open in IMG/M
3300034653\|Ga0316599_082799	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300034661\|Ga0314782_110302	Not Available	634	Open in IMG/M
3300034820\|Ga0373959_0185671	Not Available	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.52%
Host-Associated	Host-Associated	35.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.65%
Plants	Host-Associated → Plants	31.45%
Aquatic	Environmental → Aquatic	8.87%
Human	Host-Associated → Human	4.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.48%
Roots	Host-Associated → Plants → Roots	7.26%
Freshwater	Environmental → Aquatic → Freshwater	4.84%
Sediment	Environmental → Aquatic → Sediment	4.03%
Digestive System	Host-Associated → Human → Digestive System	4.03%
Peat	Environmental → Terrestrial → Peat	1.61%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.48%
Loam	Environmental → Terrestrial → Soil → Loam	6.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.84%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.03%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.61%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.03%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.23%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	28.23%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	7.26%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	5.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.84%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.03%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.03%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.03%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.61%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003571	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_35 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003735	Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034653	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0006778J45830_10377563	3300003162	Avena Fatua Rhizosphere	MNKNGMADAGSGHGIDDKIDSIKDTVKGIVDQGASKVDAVKTRVVDLKDQAVTRGGDVVARVSDMVRANPIKAVAIAFGAGYLGMRLFRR*
Ga0006778J45830_10468903	3300003162	Avena Fatua Rhizosphere	MNKNGITDTANRADDKVDSIKEAVKGLVDQGAQRVDAIKNKAFEAKDQVMDRGGDMLDSLTGMIKANPIKAVAIAFGAGYLGMRLFRR*
Ga0007419J51692_10468872	3300003571	Avena Fatua Rhizosphere	MNKNGMTDTSQRVDEKVDSIKEAVKGLVDQGAQKVDAIKHRAVEAKDQVVDRGGDMLDQLTTVIKANPIKSVAIAFGAGYIGMRLFRR*
Ga0006780_10372802	3300003735	Avena Fatua Rhizosphere	MNKNGITDTANRADDKVDSIKEAVKGLVDQGAQRVDEIKNKAFEAKDQVIDRGSDMLDSLTNVIKANPIKAVAIAFGAGYIGMRLFRR*
Ga0062591_1009997922	3300004643	Soil	MSKQGMADTGAAADNKVDSIKDAVKELVDQGAQKVDDIKSRVVEVKDQAMNRGTDMLDRTTDMIKAHPIKSVAIAFAAGYIGMRLFR*
Ga0058859_115846821	3300004798	Host-Associated	MNKNGMIDTGTATHGAEDKIDQIKDTVKGFVDQGAQRVDAIKSKVVDVKDQAITRGNDLVDRVSELVKAHPLKAVGIAFGAGYLGMRLFRR*
Ga0058859_116212901	3300004798	Host-Associated	MNKNGMTESGTATHGVEDKIDQIKDSVKGFVDQGAQRVDAIKNKVVDVKDQAFTRGNDLVDRVSDLVKAHPLKAVGIAFGAGYLGMRLFRR*
Ga0058859_118161512	3300004798	Host-Associated	MNKNDVGSAAQSTDEKLDTLKGAVKGLVDQGVQTVDALKNKVVEAKEGAITRGSDILERVTDLIKAHPIKAVAIAFSAGYLGMRLF
Ga0058863_111750341	3300004799	Host-Associated	MNKTDAGSTNRMVDEKMDALKDTVKGLADQGAQKVDALKTKVLEAKDQAIGRGSALLDRATEMIRANPLKSVGIAFVAGYLGMRLFRR*
Ga0058860_122245551	3300004801	Host-Associated	MNKNDVGSAAQSTNEKLDTLKGAVKGLVDQGVQKVDALKNKVVEAKEEAITRGSDILERVTDLIKAHPIKAVAIAFSAGYLGMRLFRR*
Ga0070690_1000057999	3300005330	Switchgrass Rhizosphere	MNKNDVGSAAQSTDEKLDTLKGAVKGLVDQGVRKVDALKNKAAEAKEEAIARGSNILERVTDLIKAHPIKAVAVAFGVGYLGMRLFRR*
Ga0070690_1002527082	3300005330	Switchgrass Rhizosphere	MNKNGMTDVGSMNRMVDEKMDSLKDTMRGLADQGAQKVDALKTKVIEAKDQAIGRGSALLDRATEMIRANPLKSVGIAFVAGYVGMRLFRRR*
Ga0068869_1004935731	3300005334	Miscanthus Rhizosphere	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADTIKAHPLKSVGIAFLAGYLGMRLFRR*
Ga0070666_108574482	3300005335	Switchgrass Rhizosphere	GTATHGAEDKIDQIKDTVKGFVDQGAQRVDAIKSKVVDVKDQAITRGNDLVDRVSELVKAHPLKAVGIAFGAGYLGMRLFRR*
Ga0070682_1016638422	3300005337	Corn Rhizosphere	MHRSGTTNVGAGVDENGVDERLDAIKDTVKSLVDQGAHKVDELKTKVVEAKDQAFTRGNALLDQVTVMVRAHPMKAVGIAFGAGYLLMRMFRR*
Ga0070689_1001424372	3300005340	Switchgrass Rhizosphere	MNKNDVGSAAQSTDEKLDTLKGAVKGLVDQGVQTVDALKNKVVEAKEGAITRGSDILERVTDLIKAHPIKAVAIAFSAGYLGMRLFRR*
Ga0068867_1003812311	3300005459	Miscanthus Rhizosphere	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADMIKAHPLKSVGIAFLAGYLGMRLFRR*
Ga0070685_114963922	3300005466	Switchgrass Rhizosphere	MNKNGMTDTGTATHGVEDKIDQIKDTVKGFVDQGAQRVDAIKSKVVDVKDQAITRGNDLVDRVSELVKAHPLKAV
Ga0068859_1008232111	3300005617	Switchgrass Rhizosphere	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADMIKAHPLKSV
Ga0066903_1008277464	3300005764	Tropical Forest Soil	MNKNGMTDVGSTNRAVDEKMESLKETVKGLADQGAQKVDALKAKVIEAKDRAVGRGNALIDRVAEVIRANPLKAVGIAFIAGFVGMRLFRRR*
Ga0068862_1020492812	3300005844	Switchgrass Rhizosphere	MNKNDVGSAAQSIDEKLDTLKGAVKGLVDQGVQKADALKNKVVEAKEEAITRGSNILERMTDLIKAHPIK
Ga0070717_100232942	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNKNGMTDTGTATHGVEDKIDQIKDSVKGFVDQGAQRVDAIKSKVVDVKDQAFTRGNDLVDRVSELVKAHPLKAVGIAFGAGYLGMRLFRR*
Ga0075363_1000780962	3300006048	Populus Endosphere	MNKNGMTGAGTTANEVDDRVDSIRDTVKGIVDQGTQKVDAIKNRVVDVKDQAVTRGNELLDRVTGMVKAHPLKAVAIAFGAGYLGMRLFRR*
Ga0075366_109355042	3300006195	Populus Endosphere	MNKNGMTDVGTANRLIDEKTDAIKDTVKGIVDQGAQRVDAFKTKVVEVKDQAFSRGSDLLDHATTMIKAHPLKSVGIAFAAGYLGMRLFRR*
Ga0126382_101120672	3300010047	Tropical Forest Soil	MNKNGMTDVGSTNRMVDEKMDSLKDTMRGLADQGAQKVDALKTKVIEAKDQAIGRGSALLDRATEMIRANPLKSVGIAFVAGYVGMRLFRRR*
Ga0127446_11019082	3300010104	Grasslands Soil	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLESMADMIKAHPLKAVGIAFLAGYLGMRLFRR*
Ga0126319_13581214	3300010147	Soil	MIKNGMDAGTANRLIDEKADAIKDTVKGIVDQGVHRVDVFKTKVVEVKDQAFSRGSDLIDRTATMIKAHPLKSVGIAFAAGYLGMRLFRR*
Ga0134062_102322631	3300010337	Grasslands Soil	LILVHIFNQENPAMNKNGMTDVGSATRTVDDKLDSLKDTMKGIVDDGAQKVGALKTKVIEVKDQALNRGGQLLDRTAGLIKAHPLKAVGIAFVA
Ga0134124_119873691	3300010397	Terrestrial Soil	MNKNDVGSAAQSTDEKLDTLKGAVKGLVDQGVRKVDALKNKAAEAKEEAIARGSNILERVTDLIKAH
Ga0134122_107971952	3300010400	Terrestrial Soil	MNKNGMTDVGTSSRVDEKVDSIKEAVKGLVDQGAQKVDALKNKAVEAKDQVFDRGGDMLDRMTAMIKAHPIKAVAIAFGAGYIGMRLFRR*
Ga0134121_100769013	3300010401	Terrestrial Soil	MNKNDAGSSTREADEKFDALKGAVKGLVDQGAQKVEEIKTKVVEVKDQAITRGSDMLDRATQMIKAHPLKSVAIAFGAGYFGMRLFRR*
Ga0137438_10084103	3300011431	Soil	MNKNGMADQGATAHAVDEKIDSLKETVKGLVDQGAQKVDAIKSRVVEAKDQAYTRGSDVLDRTTAMIKAHPLKAVAIAFGAGYIGMRLFRR*
Ga0137451_10023234	3300011438	Soil	MDKSDVGTTSHTVDETIDSLKGTVKGLVDQGAQKVDAIKAKVVEAKDLALTRGSDLLDRMTDLIKAHPIKAVAIAFGVGYLGMRLFRR*
Ga0137451_10551443	3300011438	Soil	MNKTGATDVGTKIDEKIDSLKDTVKGYVDQGAQKVDELKTKIVEAKDEAITRGNNLLDRAAEMVRAHPLRSVGIAFGAGYLLMRLFRR*
Ga0137437_10011945	3300011442	Soil	MDKSDVGTTSHTVDETIDSLKGTVKGLVDQGAQKVDAIKAKVVEAKDQALTRGSYLLDRMTNMIKAHPIKAVAIAFGVGYLGMRLFRR*
Ga0150985_1058215362	3300012212	Avena Fatua Rhizosphere	MNKNGMTGGSTDDKVDSIKETVKGYVEQGAQTVDAIKSKVVEVKDQAVHRGGDVLANMTDLIKAHPLKAVGIAFGAGYFGMRLFRR*
Ga0150985_1087338512	3300012212	Avena Fatua Rhizosphere	SIKDTVKGIVDQGASKVDAVKTRVVDLKDQAVTRGGDVVARVSDMVRANPIKAVAIAFGAGYLGMRLFRR*
Ga0150985_1089335262	3300012212	Avena Fatua Rhizosphere	MNKNGMADVGSGHGIDDKIDSIKDTVKGIVDQGASKVDAVKTRVVDLKDQAVTRGSDVVARVSDIVRSNPIKAVAIAFGAGYLGMRLFRR*
Ga0150985_1131185143	3300012212	Avena Fatua Rhizosphere	MNKNGMTDVGTSSRVDEKVDSIKEAVKGLVDQGAQKVDALKNKATEAKDQVFDRGGDMLDRLTAMIKANPIKAVAIAFGVGYVGMRLFRR*
Ga0150985_1177260611	3300012212	Avena Fatua Rhizosphere	MNKNGMTDVGATTTHGVDDRIEAIKDTVKGIVDTGSQKVDAIKSKVGEVKEQAFTRGGDLMERVSDMVKAHPLKAVGIAFGAGYLGMRLFRR*
Ga0137459_10133485	3300012228	Soil	MDKNDVGTTSQTVDETIDSLKGTVKGLVDQGAQKVDAIKAKVVEAKDQALTRGSYLLDRMTNMIKAHPIKAVAIAFGVGYLGMRLFRR*
Ga0150984_1081893222	3300012469	Avena Fatua Rhizosphere	VLFFLLTFARSIPMNKNGMTDVGATTTHGVDDRIEAIKDTVKGIVDTGSQKVDAIKSKVGEVKEQAFTRGGDLMERVSDMVKAHPLKAVGIAFGAGYLGMRLFRR*
Ga0150984_1084061261	3300012469	Avena Fatua Rhizosphere	MNKNDVGSTVQSTDEKLDALKGAVKGLVDQGVQKVDAIKAKVVEAKDQAITRGGDMVERMTDLIKAHPIKAVAIAFGAGYLGTRLFRR*
Ga0150984_1092347573	3300012469	Avena Fatua Rhizosphere	MNKNGMTGGSTDDKVDSIKETVKGYVEQGAQTVDAIKSKVVEVKDQAVHRVGDVLANMTDLIKAHPLKAVGIAFGAGYFGMRLFRR*
Ga0150984_1095727872	3300012469	Avena Fatua Rhizosphere	MNKNGITDTANRADDKVDSIKEAVKGLVDQGAQRVDEIKNKAFEAKDQVIDRGSDMLDNLTNVIKANPIKAVAIAFGAGYIGMRLFRR*
Ga0150984_1150301201	3300012469	Avena Fatua Rhizosphere	MLAPRPPGSSTRRIDAIKDTVKGYVDQGAQRVDQISNRVVEAKDQAINRGGDMVDRATDMIKAHPIKSVAIAFAAGYVGMRLFR*
Ga0150984_1220060471	3300012469	Avena Fatua Rhizosphere	MNKNGMTDVGAGNRVDEKVDSIKEAVKGFVDQGAQKVDAIKHKAVEVKDQAFDRGSDMLDSMTSMIKAHPIKAVAIAFGAGYIGMRLFRR*
Ga0137404_121424781	3300012929	Vadose Zone Soil	MNKNDVGSTAQSTDEKLDALKGAVKGLVDQGVQKVDAIKAKVVLAKDQAFTRGGDVVERMTHLIKAHPIKAVAIAFGA
Ga0157378_100650674	3300013297	Miscanthus Rhizosphere	MNKNGMTGGSTTDDKIDSIKETVKGYVEQGAQTVDAIKSKVVEVKDQAVNRGGDMLTSMTDLIKAHPLKAVGIAFGAGYLGMRLFRR*
Ga0157378_120638621	3300013297	Miscanthus Rhizosphere	KMSPQENPMNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADMIKAHPLKSVGIAFLAGYLGMRLFRR*
Ga0134079_106057601	3300014166	Grasslands Soil	TRTVDDKLDSLKDTMKGIVDDGAQKVGALKTKVIEVKDQALNRGGQLLDRTAGLIKAHPLKAVGIAFVAGYLGMRLFRR*
Ga0180114_12905811	3300019232	Groundwater Sediment	MNKNDAGSSTREVDEELDAIKGAVKGLVDQGAQKVDEIKTKVAEVKDQAITRGSDMLGRATQMIKAHPLKSVAIAFGAGYFGMRLFRR
Ga0184647_15253601	3300019263	Groundwater Sediment	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLEHTVDMIKAHPLKSVGIAFLAGYLGMRLFRR
Ga0193744_10189472	3300019874	Soil	MNKNGITDVGTEERRVEEKIDSLKETVKGLVDHGAQKADAIKSKVVEVKDQALHRGGDALDRVTALIKAHPLKAVGIAFGAGYVGMRLFRR
Ga0193712_10045711	3300019880	Soil	MNKNGMADQGSATHAVDEKIDSLKETVKGLVDQGAQKVDAIKTRVVEVKDQAYTRGSDVLDRTTALIKAHPIKAVAIAFGAGYVGMRLFRR
Ga0179583_11076301	3300021286	Vadose Zone Soil	EMNKNDVGSTAQNTEEKIDALKGAVKGLVDQGVQKVDAIKAKVVEAKDQAFTRGGDVVERMTDLIKAHPIKAVAIAFGAGYLGTRLFRR
Ga0179958_10290431	3300021315	Vadose Zone Soil	MNKNGMTDTGTANHGVDDRIDQIKDTVKGFVDQGAQRVDQIKSKVVDVKDQAFSRGNELVDRVADMVRAHPLKAVAIAFSAGYLGMRLFRR
Ga0179958_10920404	3300021315	Vadose Zone Soil	MNKNGMTDVGTANRLIDDKADAIKDTVKGIVDHGAQRVDAFKTKVVEVKDQAFSRGSDLLEHATAMIKAHPLKSIGVAFAAGYLGMRLFRR
Ga0222624_10040862	3300021951	Groundwater Sediment	MNKNGMTDAGTRIDEKVDSIKEAVKGLVDQGAQRVDAIKNKAASAKDQVLDRGGDLLDRMTAMIKAHPIKAVAIAFGAGYIGMRLFRR
Ga0222624_10140201	3300021951	Groundwater Sediment	MNKNGITEPGGAEKTIDDKMDSLRDTVKGYVEQGAHKVDALKHKVVEAKDQALDRGSDLLDRMTRMIKAHPIKSVAIAFGAGYLGMRLFRR
Ga0222624_10758441	3300021951	Groundwater Sediment	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLESMADMIKAHPLKSVGIAFLAGYLGMRLFRR
Ga0242641_10006883	3300022499	Soil	MNKNGMTDAGSATHSVEDKIDSLKDTVKGFVDQGAQRVDAIKSKVVEVKDQAMHRGSDLLGHVTDLIKAHPLKAVGIAFGAGYIGMRLFRR
Ga0242658_11012882	3300022530	Soil	MNKNGFTGSSASRGVDDKIDSLKDTVKGIVDQGAHTVDAIKDRVADVKDQAFEQGNLVLDRVTALIKAHPLKAIGIAFGVGFIGMRLMRR
Ga0247777_12237991	3300022917	Plant Litter	MNKNGMTDVGSTTNRIDEKVDALKDSVKGIVDQGAQKAEAIKTKVVEVKDRAFDRGSDALDSLTSMIKAHPLKAIAIAFGAGYIGMRLFRR
Ga0207680_113527381	3300025903	Switchgrass Rhizosphere	GTATHGAEDKIDQIKDNVKGFVDQGAQRVDAIKSKVVDVKDQAITRGNDLVDRVSELVKAHPLKAVGIAFGAGYLGMRLFRR
Ga0207687_101126562	3300025927	Miscanthus Rhizosphere	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADTIKAHPLKSVGIAFLAGYLGMRLFRR
Ga0207709_104927292	3300025935	Miscanthus Rhizosphere	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADMIKAHPLKSVGIAFLAGYLGM
Ga0207670_100224673	3300025936	Switchgrass Rhizosphere	MNKNDVGSAAQSTDEKLDTLKGAVKGLVDQGVQTVDALKNKVVEAKEGAITRGSDILERVTDLIKAHPIKAVAIAFSAGYLGMRLFRR
Ga0207668_116560921	3300025972	Switchgrass Rhizosphere	MNKNGMIDTGTATHGAEDKIDQIKDTVKGFVDQGAQRVDAIKSKVVDVKDQAITRGNDLVDRVSERRRAIRLVACRRQELTAC
Ga0207676_110337892	3300026095	Switchgrass Rhizosphere	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADTIK
Ga0207675_1004983243	3300026118	Switchgrass Rhizosphere	MNKNGMTDVGSATRAVDDKLDSLKDAVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADMIKAHPLKSVGIAFLAGYLGMRLFRR
Ga0268265_124546771	3300028380	Switchgrass Rhizosphere	MNKNGMTDVGSATRAVDDKLDSLKDTVKGIVDQGAQRVDAFKTKVVEVKDQAMSRGGDVLERMADMIKAHPLKSVGIAFLAGYLGMRLFRR
Ga0307517_101266063	3300028786	Ectomycorrhiza	MNKNGMTDVGTGQRIDEKVDSIKESVKGFVDQGAQKVDAFKTKVVEVKDQALDRGSHVLDRMTAMIKAHPLKAVAIAFGAGYVGMRLFRR
Ga0307515_100701265	3300028794	Ectomycorrhiza	MNKNGMTDVGSTTRMVDEKIDSLKDTVKGLADQGAQKVDAFKTRVIEAKDEAIGRGGAMLDRTSALIKAHPLKSVGVAFAVGYLGMRLFRR
Ga0307515_105231561	3300028794	Ectomycorrhiza	MNKNGMTGASGSTQDAEDKIDSIRDTVKGIVDQGTQKVDAIKNKVVDVKDQAVTRGNELVARVTDMVKAHPLKAVAIAFGAGYLGMRLFRR
Ga0311337_115609612	3300030000	Fen	MNKNGMTGGSTHSVDDKIDSIKDTVKSYVDQGAQTVDAIKSRVVDAKDQAVNRGNDMLAQMTELIKAHPFKAVGIAFGAGYIGMRLFRR
Ga0308202_10190291	3300030902	Soil	MNKNGMTDVGTSSRVDDKVDSIKEAVKGLVDQGAQKVDAFKNKAVEAKDQVFDRGGDMLDRLTTMIKSHPIKAVAIAFGAGYIGMRLFRR
Ga0308202_11206981	3300030902	Soil	MIKNGMADQGSVTQSVDEKIDSLKETVKGIVDQGAQKVDAIRHKVVEAKEQAVTRGSDVLDRASAFIKANPIKSVAIAFGAGYIGMRLFRR
Ga0308200_10023492	3300030905	Soil	MNKNGMTDVGTANRVDDKVDSIKEAVKGLVDQGAQKVDAFKNKAVEAKDQVFDRGGDMLDRLTTMIKSHPIKAVAIAFGAGYIGMRLFRR
Ga0308200_10258432	3300030905	Soil	MNKNGMTDVGTSNRVDEKVDSIKEAVKGLVDQGAQKVDAIKNKAVEAKDQVFDRGGDMLERMTAMIKANPIKSVAIAFGAGYIGMRLFRR
Ga0308200_10625522	3300030905	Soil	MNKNGMTDAGTRIDEKVDSIKEAVKGLVDQGAQRVDAIKNKAASAKDQVLDRGSDLLDRMTAMIKAHPIKAVAIAFGAGYIGMRLFRR
Ga0308200_10692481	3300030905	Soil	MNNNGMTDVGATTTHHGVDDRIDSIKETVKGIVDTGAQKVDAIKSKVGEVKDQAFTRGNDVIDRVSEMVKAHPLKAVGIAFGAGYLGMRLFRR
Ga0308200_11151182	3300030905	Soil	MNKNGMADIGTTTHGVEGKIDAIKDTVKGIVDQGAQQVDAIKSKVGDVKEQAFSRGSDLAERVTDMVKAHPLKAVAIAFGAGYLGM
Ga0308200_11343521	3300030905	Soil	MTGTTDDKIDSIKDTVKSYVDQGAQTVDAIKSKVVEVKDQAVNRGNDVLARMTDLIKAHPFKAVGIAFGAGYLGMRLFRR
Ga0308200_11674901	3300030905	Soil	MNKNGMTTDSGTATQEVEGRIDAIKDTVKGIIDTGAQKVDAIKSKAGDVKEQAFSRGNDLVERVSDMVKAHPLKAVGIAFGAGYLGMRLFRR
Ga0138302_12154511	3300030937	Soil	MNKNGMTGTAHGMDDKIDSIKDTVKGFVDQSAHTVDAIKSKVADVKDQAINRGGDLLEHVAQLIKAHPIKAVGI
Ga0308190_10243511	3300030993	Soil	MNKNGMTDVGGTTRAIDEKLDSIKDTVKGIVDDGAQRVDALRSRVVEAKDQVMNRGGELLDRTASLIK
Ga0308190_10415991	3300030993	Soil	VDEKIDSLKETVKGIVDQGAQKVDAIRHKVVEAKEQAVTRGSDVLDRASAFIKANPIKSVAIAFGAGYIGMRLFRR
Ga0308190_10513592	3300030993	Soil	MNKNGMTDVGTSNRVDEKVDSIKEAVKGLVDQGAQRVDAIKNKAASAKDQVLDRGGDLLDRMTAMIKAHPIKAVAIAFGAGYIGMRLFRR
Ga0308190_11874331	3300030993	Soil	MNKNGMTDVGSATRTVDEKIDSLKDTVKGLADQGAQRVDAFKTKVVEAKDEAMSRGGVLLDRTSDMIKAHPLKSVGVAFVVGYLGMRLFRR
Ga0308189_100123072	3300031058	Soil	MNKNGMTDTGTATHGVEDKIDQIKDTVKGFVDQGAQRVDAIKSKVVDVKDQAFTRGNDLVDRVSELVKAHPLKAVGIAFGAGYLGMRLFRR
Ga0308189_100151132	3300031058	Soil	MNKNGMTDVGSATRTVDEKIDSLKDTVKGLADQGAQRVDAFKTKVVEAKDEAMSRGGVLVDRASDMIKAHPLKSVGVAFVVGYLGMRLFRR
Ga0308189_100341552	3300031058	Soil	MNKNGMDTGTATHGVEDKIDQIKDSVKGFVDQGAQRVDAIKNKVVDVKDQAFTRGNDLVDRVSDLVKAHPLKAVGIAFGAGYLGMRLFRR
Ga0308189_101010273	3300031058	Soil	MNKNGMTEPGSVEKIVEEKLDSLRDTVKGYVDQGAQRVDALKHKVVEAKDQAIDRGSDLLDRTSTLIKAHPIKSVAIAFGVGYIGMRLFRR
Ga0308189_101211682	3300031058	Soil	MNKNGMTDVGATTTHHGVDDRIDAIKETVKGIVDTGAQKVDAIKSKVGEVKDQAFTRGNDVVDRVSEMVKAHPLKAVAIAFGAGYLGMRLFRR
Ga0308189_103105711	3300031058	Soil	MNKNGMADTSDDKIDSIKDTVKGIVDQGQHTVDAVKSKVVDIKDQAFTRGSDLLDRVTDMVKANPLKAVAIAFGAGYIGMRLFRR
Ga0308189_104043552	3300031058	Soil	MNKNGITGSDDRGIDEKVDSIKETVKGIVDQGAQRVDAIKSKVVEAKDQALHRGGDVLDRVTELIKAHPIKAVGIAFGAGYIGMRLFRR
Ga0308189_104269061	3300031058	Soil	MNKQGTADPTSHGIDEKVESIKDSVKGIVDQGAQKVDQLKTKVIEVKDQAVHRGSDMLDRTSDMIKAHPIKSVAIAFAAGYIGMRLFR
Ga0308192_10066532	3300031082	Soil	MNKNGMTGTTDDKIDSIKDTVKSYVDQGAQTVDAIKSKVVEVKDQAVNRGNDVLAQMTDLIKAHPFKAVGIAFGAGYLGMRLFRR
Ga0308192_10162692	3300031082	Soil	MNKNGMTDVGTSNRVDEKVDSIKEAVKGLVDQGAQKVDAIKNKAVETKDQMFDRGGDMLERMTAMIKANPIKSVAIAFGAGYIGMRLFRR
Ga0308192_10298492	3300031082	Soil	MNKNGMTDVGTSNRVDDKVDSIKEAVKGLVDQGAEKVDAIKNKAVQTKDQVFDRGGDMLERMTAMIKANPIKSVAIAFSAGYIGMRLFRR
Ga0308197_100877901	3300031093	Soil	MNKNGMADQGSASHTVEEKMDSLKETVKGLVDQGAQKVDQIKNKVVEAKDQAYTRGSDVLDRTTAMIKAHPIKAVAIAFGAGYIGMRLFRR
Ga0308197_101668442	3300031093	Soil	MNKNGMANERSANQGVDEKIESLKDTVKGLVEQGADKVDAIKTKVVEVRDQAFTRGSDMLDRTTAMIQAHPIKAVAIAFGAGYIGMRLFRR
Ga0308197_102271282	3300031093	Soil	MNKNGMTDQGSATRVVDEKIDSLKETVKDLVDQGAQKVDAIKTRVAEAKDQAVTRGNDVMDRATAMIKAHPIKAVAIAFGAGYIGMRLFRR
Ga0308197_103197662	3300031093	Soil	MNKNGMTDVGGTTRAIDEKLDSIKDTVKGIVDDGAQRVDALRSRVVEAKDQVMNRGGELLDRTAGLIKAHPLKAVGVAFV
Ga0308197_103430001	3300031093	Soil	MNKNGMTDVGTRVDEKVDSIKESVKGFVDQGAQKVDAFKSKVVEVKDQAFDRGSDVLDRMTTLIKAHPFKSIAIAFGAGYLGMRLFRR
Ga0308197_104628121	3300031093	Soil	MNKSGMSDAGSASPDVDDKFDGLRDAVRGFVDQSAQKVDDIKAKVGEIKDQAFTRGGDALGRVSDMIKAHPIKAVGIAFGVGYVGMRLFRR
Ga0308193_10216662	3300031096	Soil	MNKNGMADQASATHGDEKIDSLKETVKGLVDQGAQKVDAIKNKVVEAKDQAYTRGSDVLDRVTMMIKAHPIKAVAVAFGAGYIGMRLFRR
Ga0307496_100074423	3300031200	Soil	TRAIDEKLDSMKDTMKGIVDDGAQRVDALRSRVVEAKDQVMNRGGELLDRTASLIKAHPLKSVGIAFVAGYVGMRLFRR
Ga0302323_1000788214	3300031232	Fen	MNKNGMTGSTDDKMDSIKDTVKGYVEQGAQTVDAIKSKVVEVKDQAVHRGGDALATMTDLIKAHPLKAVGIAFGAGYLGMRLFRR
Ga0308186_10200661	3300031422	Soil	MNKNGMTGTTDDKIDSIKDTVKSYVDQGAQTVDAIKSKVVEVKDQAVNRGNDVLARMTDLIKAHPFKAVGIAFGAGYLGMRLFRR
Ga0170820_100847602	3300031446	Forest Soil	MNKNGMTDTGTANQGVDDKIDQIKDTVKGFVDQGAQRVDQLKNKVVDVKDQALSRGNDLVDHVADLVKAHPLKAVAIAFGAGYLGMRLFRR
Ga0307513_100413071	3300031456	Ectomycorrhiza	MNKNGMTDVGATTHHGVDDRIDAIKETVKGIVDTGAQKVDAIKSKVGEVKDQAFTRGNDVIDRVSEMVRAHPLKAVGIAFGAGYL
Ga0170818_1032146962	3300031474	Forest Soil	MNKNGMTDTGTANQGVDDRIDQIKDTVKGFVDQGAQRVDQLKNKVVDVKDQALSRGNDLVDHVADLVKAHPLKAVAIAFGAGYLGMRLFRR
Ga0307509_1000172311	3300031507	Ectomycorrhiza	MTKNGMTGETHGVDEAIDSIKETVKQTVKSYADHGAQTVDAIKSKVVEAKDQAVTRGNDVLARITELIKAHPFKAVGIAFGAGYIGMRLFRRS
Ga0307508_100421664	3300031616	Ectomycorrhiza	MNKNGMTDVGSAAQGVDDKIDSLKETVKGIVDQGAQKVDAIKTKVVEAKDQAFHRGSDVIERMTDLIKAHPIKAVGIAFGAGYLGMRLFRR
Ga0307516_103687253	3300031730	Ectomycorrhiza	MHKNGMTGGSVSQGVDDRIDSIKDTVKGFVDHSAQTVDAIKSRVVDVKDQAMHRGGDAVARVTALIKAHPLKAVGIAFGAGYLGMRLFRR
Ga0308175_10000018337	3300031938	Soil	MNKNDVGSTAQSTDEKLDTLKGAVKGLVDQGAQKVDAIKAKVIEAKDQAVTRGGDVVERMTELIKAHPMKAVAIAFGAGYVGSRLFRR
Ga0307472_1015027951	3300032205	Hardwood Forest Soil	MNKNGMTGAGSTTAHGADDAIDSLKDAVKGFVDQGSQTVDAIKNKVVDVKDQAINRGTDMLDRVTVLIKAHPLKAIGIAFGAGYLGMRLFRR
Ga0307472_1021712392	3300032205	Hardwood Forest Soil	NKNDVDSTAQSTDEKLDALKGAVKGLVDQGVQKVDAIKAKVVEAKDQAFTRGGDVVERMTDLIKAHPIKAVAIAFGAGYAGMRLFRRR
Ga0372943_0030000_499_783	3300034268	Soil	MNKNGMTDVGSTAGSTRGVDEKIDSLKETVRGLADQGAQKVDALKSKAVEVKDEALNRGGALLDRTCSMIQAHPLKSVGVAFVAGYFGMRLFRR
Ga0316599_082799_14_289	3300034653	Untreated Peat Soil	MNKNGMTDTGTANQGVDDRIDQIKDTVKGFVEQGAQRVDQIKSKVVDVKDQALSRGNDLVDRVADLVKAHPLKAVAIAFGAGYLGMRLFRR
Ga0314782_110302_112_387	3300034661	Soil	MNKNGMADTGAGTSGVEGKIDSIKETVKGFVDQGSQQVDAIKSKVVDVKDQAFSRGSDLAERMADMVKAHPLKSVAIAFGAGYLGMRLFRR
Ga0373959_0185671_179_454	3300034820	Rhizosphere Soil	MNKNGMTDTGTANQGVDDRIDQIKDTVKGFVDQGAQRVDQIKNKVVDVKDQALSRGNDLVERMADLVKAHPLKSVAIAFGAGYLGMRLFRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069033

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences