Metagenome / Metatranscriptome Family F069017

Basic Information
Family ID	F069017
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	61 residues
Representative Sequence	LPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Number of Associated Samples	114
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	66.94 %
% of genes from short scaffolds (< 2000 bps)	99.19 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (66.129 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.677 % of family members)
Environment Ontology (ENVO)	Unclassified (30.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.677 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1JGI10213J12805_107795431 2JGI11643J12802_101232231 3JGI10216J12902_1035485861 4JGI12053J15887_102764453 5C688J35102_1179063632 6Ga0062589_1019754732 7Ga0062589_1021693862 8Ga0063356_1048591242 9Ga0062595_1023032031 10Ga0066679_110335951 11Ga0070687_1008741161 12Ga0070669_1011391721 13Ga0070700_1010262061 14Ga0070694_1018825631 15Ga0070686_1019028962 16Ga0066905_1009459442 17Ga0066905_1011071392 18Ga0068861_1005628001 19Ga0068861_1009965141 20Ga0068862_1004725772 21Ga0075365_100813542 22Ga0075024_1008849751 23Ga0075422_102839771 24Ga0074059_121111121 25Ga0066660_110234593 26Ga0075428_1004872414 27Ga0075421_1024021941 28Ga0075431_1020470953 29Ga0075429_1005391672 30Ga0079215_108711872 31Ga0079218_131401581 32Ga0105250_105963181 33Ga0075418_123606643 34Ga0075418_130559341 35Ga0105091_103856992 36Ga0114129_103414233 37Ga0105243_108381191 38Ga0111538_138908332 39Ga0105092_100904502 40Ga0105092_100938892 41Ga0105249_127890212 42Ga0105249_129844442 43Ga0105347_10543282 44Ga0105079_10004095 45Ga0105088_10972541 46Ga0105072_11212092 47Ga0105085_10867622 48Ga0105064_10660343 49Ga0105078_10419632 50Ga0105058_10741612 51Ga0126370_113729142 52Ga0126376_123936072 53Ga0126372_124782542 54Ga0126379_123676962 55Ga0134125_116253511 56Ga0134122_124537971 57Ga0137424_10631632 58Ga0137463_13069513 59Ga0137344_10903222 60Ga0136618_102056933 61Ga0137435_11867842 62Ga0136615_104591102 63Ga0157300_10895662 64Ga0157299_102479592 65Ga0157282_102064832 66Ga0157306_100872682 67Ga0164308_116614621 68Ga0157378_117530071 69Ga0134078_105909912 70Ga0157380_102361404 71Ga0157380_135183281 72Ga0180064_11433051 73Ga0167642_10422982 74Ga0167652_10706621 75Ga0167658_10368482 76Ga0167658_10536962 77Ga0132257_1016413531 78Ga0163161_115705891 79Ga0184635_103964932 80Ga0190272_122289522 81Ga0190268_118209632 82Ga0066662_126036871 83Ga0190271_105151052 84Ga0190273_100892803 85Ga0173481_100485282 86Ga0210379_105149541 87Ga0210380_100730752 88Ga0247797_10163211 89Ga0209751_113517912 90Ga0207693_110856412 91Ga0207649_104848983 92Ga0207681_111617191 93Ga0207681_116485273 94Ga0207706_114987133 95Ga0207661_116761812 96Ga0207712_111334032 97Ga0207668_121531892 98Ga0207658_121021962 99Ga0207641_125683441 100Ga0209956_10848291 101Ga0209877_10301432 102Ga0208685_10257963 103Ga0209874_11300953 104Ga0208990_10818802 105Ga0209118_10542971 106Ga0209819_100750192 107Ga0209069_107534591 108Ga0233417_101366452 109Ga0268264_124688472 110Ga0247823_114083012 111Ga0307282_105532493 112Ga0307310_103930562 113Ga0170818_1110232443 114Ga0310888_109517211 115Ga0307468_1002763772 116Ga0307468_1006590052 117Ga0310900_110763452 118Ga0310889_102004862 119Ga0307471_1040786612 120Ga0307472_1001677382 121Ga0326723_0438773_9_215 122Ga0364927_0059861_730_906 123Ga0334925_137464_1_153 124Ga0373917_0003252_962_1138
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102 1JGI10213J12805_107795431 2JGI10216J12902_1035485861 3C688J35102_1179063632 4Ga0062589_1019754732 5Ga0062595_1023032031 6Ga0068861_1009965141 7Ga0075418_130559341 8Ga0105064_10660343 9Ga0105078_10419632 10Ga0105058_10741612 11Ga0180064_11433051 12Ga0132257_1016413531 13Ga0190273_100892803 14Ga0209751_113517912 15Ga0207649_104848983 16Ga0207661_116761812 17Ga0209956_10848291 18Ga0307468_1002763772 19Ga0326723_0438773_9_215 20Ga0334925_137464_1_153
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58 1Ga0307310_103930562 2JGI10213J12805_107795431 3JGI11643J12802_101232231 4Ga0062589_1019754732 5Ga0062589_1021693862 6Ga0062595_1023032031 7Ga0066905_1009459442 8Ga0066905_1011071392 9Ga0075365_100813542 10Ga0074059_121111121 11Ga0075428_1004872414 12Ga0079215_108711872 13Ga0079218_131401581 14Ga0105079_10004095 15Ga0105078_10419632 16Ga0126372_124782542 17Ga0126379_123676962 18Ga0137463_13069513 19Ga0136618_102056933 20Ga0137435_11867842 21Ga0136615_104591102 22Ga0157300_10895662 23Ga0157378_117530071 24Ga0157380_102361404 25Ga0180064_11433051 26Ga0167658_10536962 27Ga0190272_122289522 28Ga0190273_100892803 29Ga0209751_113517912 30Ga0207649_104848983 31Ga0207706_114987133 32Ga0207661_116761812 33Ga0207641_125683441 34Ga0209956_10848291 35Ga0209874_11300953 36Ga0307282_105532493 37Ga0310900_110763452 38Ga0310889_102004862 39Ga0326723_0438773_9_215 40Ga0334925_137464_1_153 41Ga0373917_0003252_962_1138
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.79% β-sheet: 0.00% Coil/Unstructured: 37.21%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF01527	HTH_Tnp_1	75.00
PF13276	HTH_21	6.45
PF13683	rve_3	6.45
PF00665	rve	3.23
PF01548	DEDD_Tnp_IS110	0.81
PF01609	DDE_Tnp_1	0.81
PF02371	Transposase_20	0.81
PF00753	Lactamase_B	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	3.23
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	3.23
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	3.23
COG4584	Transposase	Mobilome: prophages, transposons [X]	3.23
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.61
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.81
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.81
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.81

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.13 %
Unclassified	root	N/A	33.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.13 %
Unclassified	root	N/A	33.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.13 %
Unclassified	root	N/A	33.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.90 %
Unclassified	root	N/A	33.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.10 %
Unclassified	root	N/A	33.87 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	43.55 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.81 %
Unclassified	root	N/A	33.87 %

Name	Rank	Taxonomy	Distribution
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.61 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.81 %
Unclassified	root	N/A	33.87 %

Name	Rank	Taxonomy	Distribution
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.81 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.81 %
Unclassified	root	N/A	33.87 %

Name	Rank	Taxonomy	Distribution
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.81 %
Unclassified	root	N/A	33.87 %
unclassified Sphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium	0.81 %

Name	Rank	Taxonomy	Distribution
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.81 %
Sphingobium sp. YR768	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. YR768	0.81 %
Unclassified	root	N/A	33.87 %

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300028043\|Ga0233417_10136645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1052	Open in IMG/M
3300000858\|JGI10213J12805_10779543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	517	Open in IMG/M
3300000890\|JGI11643J12802_10123223	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300000956\|JGI10216J12902_103548586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	879	Open in IMG/M
3300001661\|JGI12053J15887_10276445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300002568\|C688J35102_117906363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
3300004156\|Ga0062589_101975473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	591	Open in IMG/M
3300004156\|Ga0062589_102169386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	568	Open in IMG/M
3300004463\|Ga0063356_104859124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300004479\|Ga0062595_102303203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.81%
Environmental	Environmental	72.58%
Host-Associated	Host-Associated	26.61%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	15.32%
Bioremediation	Engineered → Bioremediation	0.81%
Plants	Host-Associated → Plants	26.61%
Terrestrial	Environmental → Terrestrial	57.26%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	0.81%
Freshwater	Environmental → Aquatic → Freshwater	7.26%
Metal	Engineered → Bioremediation → Metal	0.81%
Peat	Environmental → Terrestrial → Peat	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.35%
Roots	Host-Associated → Plants → Roots	0.81%
Sediment	Environmental → Aquatic → Sediment	8.06%
Soil	Environmental → Terrestrial → Soil	55.65%

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.65%
Ice	Environmental → Aquatic → Freshwater → Ice	1.61%
Lake	Environmental → Aquatic → Freshwater → Lake	0.81%
Loam	Environmental → Terrestrial → Soil → Loam	10.48%
Sand	Environmental → Terrestrial → Soil → Sand	7.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.84%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.65%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.06%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	7.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.81%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.23%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.26%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.61%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.23%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.61%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 114 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_107795431	3300000858	Soil	LSSKLDDVGRQPLLVLAALRRLALRRAVLTERRTGATLGNANNTTNMLDTGAPARRAQ*
JGI11643J12802_101232231	3300000890	Soil	AGELDDVGRQPLLVVAALRHLALRRAMLPERRTGATLGNAKNTTNMLDTRAPTRRAQ*
JGI10216J12902_1035485861	3300000956	Soil	KLDDVGRQPLLVVAALQRPALRRAMLAERRTGATLGDAKFTANMLDAGTATRRAQ*
JGI12053J15887_102764453	3300001661	Forest Soil	LPGKLDDVGCQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ*
C688J35102_1179063632	3300002568	Soil	PGQLDGVGRQPLFIVAAVWDLALRRAMLAKRRTGAALGNGQLPSNMLNAGAATRGA*
Ga0062589_1019754732	3300004156	Soil	VAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0062589_1021693862	3300004156	Soil	MSGELDDVGRQPFLVVTALRRPALRRAVLAERRTGATLGDAKLTTNMLDARATTRRAQ*
Ga0063356_1048591242	3300004463	Arabidopsis Thaliana Rhizosphere	LPGKLDDVGRQPLLVVAALRRLALRRAVLTERRTGATLGDAKNTTNMLDTGAPARRAQ*
Ga0062595_1023032031	3300004479	Soil	DLAIAIAAILAGQLHRVGHQPLFVFTALRDLTLRRAMLAERRAGAALGDAQLPSNMLDAGAATRGA*
Ga0066679_110335951	3300005176	Soil	ILPGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDAKGTTNMLDAGTSTRRAQ*
Ga0070687_1008741161	3300005343	Switchgrass Rhizosphere	QSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0070669_1011391721	3300005353	Switchgrass Rhizosphere	KLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0070700_1010262061	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0070694_1018825631	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0070686_1019028962	3300005544	Switchgrass Rhizosphere	QLDSVGCQLLFIVAALRDLALRRAMLAERRTGTTLGNGQLASNMLDAGAATRGA*
Ga0066905_1009459442	3300005713	Tropical Forest Soil	LSGELDDVGRQPLLLVAALRRLALRRTMLPERRTRATLGDANNTANMLDTGTPTRRAQ*
Ga0066905_1011071392	3300005713	Tropical Forest Soil	LSGKLDDVGRQPLLVVAALRRLALRRAMLAERRTGATLGDAKNTANMLDTGAPARRAQ*
Ga0068861_1005628001	3300005719	Switchgrass Rhizosphere	DVGRQPLLVIAALRHLALCRAVLAERRTGATLGDAKGTTNMLDAGTSTRRAQ*
Ga0068861_1009965141	3300005719	Switchgrass Rhizosphere	VAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0068862_1004725772	3300005844	Switchgrass Rhizosphere	LSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0075365_100813542	3300006038	Populus Endosphere	LPGKLDDVGGQPLLVVAALRRLALRRAVLTKRRTGATLGDAKNATNLLDTGAPARRA*
Ga0075024_1008849751	3300006047	Watersheds	PGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDAKFTTNMLDAGTPTRRAQ*
Ga0075422_102839771	3300006196	Populus Rhizosphere	LDDVGRQPLLVVAALRHLALCRAVLAERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0074059_121111121	3300006578	Soil	VAVAAILPGKLDDIGRQPLLVIAALRYLALRRAVLAERRASATLGYAKFSANMLDAGTATRRAQ*
Ga0066660_110234593	3300006800	Soil	GKLDDVGRQPFLVVAALRCLALRRAVLAERRTGATLGNAKLTTNMLDTGTATRRAQ*
Ga0075428_1004872414	3300006844	Populus Rhizosphere	LPGKLDDVGRQPVFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0075421_1024021941	3300006845	Populus Rhizosphere	GVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLMTNMLNAGAATRRAQ*
Ga0075431_1020470953	3300006847	Populus Rhizosphere	IAIAAVLSGKLDDVGRQPLLVVAALRHLALCRAVLAERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0075429_1005391672	3300006880	Populus Rhizosphere	LPGELDDVGRQPLFVVAALRRLALCRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0079215_108711872	3300006894	Agricultural Soil	LPGQLDEVGGQPLFIVTAVRDLTLRRAMLAERRTGAPLGDAQLPSNMLDAGAATRGA*
Ga0079218_131401581	3300007004	Agricultural Soil	TAIVPGQLDEVSRQALFIVAAVWDLALRRAMLAERRAGTALGDGELPSNMLNAGAATRGA
Ga0105250_105963181	3300009092	Switchgrass Rhizosphere	AGIPQQSRDLPVAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0075418_123606643	3300009100	Populus Rhizosphere	SGKLDDVGRQPLLVVAALRRPALRRAMLAERRTRATLGDAKLNANMLDAGTATRRA*
Ga0075418_130559341	3300009100	Populus Rhizosphere	LPGKLDDVGRQPILVIAALRHLALRRAVLAERRAGATLGDAKLTTNML
Ga0105091_103856992	3300009146	Freshwater Sediment	AVAAVLPGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0114129_103414233	3300009147	Populus Rhizosphere	LSGKLDDVGRQPLLVVAALRHLALCRAVLAERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0105243_108381191	3300009148	Miscanthus Rhizosphere	AQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0111538_138908332	3300009156	Populus Rhizosphere	VHKPAGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0105092_100904502	3300009157	Freshwater Sediment	LPGKLDDVGRQPLFVIAALRYLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0105092_100938892	3300009157	Freshwater Sediment	LPGKLDDIGRQPLLVVAALRRLALCRAVLAERRTGATLGNAKLTTNMLDAGTATRRA*
Ga0105249_127890212	3300009553	Switchgrass Rhizosphere	AGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0105249_129844442	3300009553	Switchgrass Rhizosphere	AGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0105347_10543282	3300009609	Soil	LPGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0105079_10004095	3300009805	Groundwater Sand	PGEIDDVGRQLLLVIAALRHLALRRAMLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0105088_10972541	3300009810	Groundwater Sand	GVVQQSRDLSIAIAAVLSGKLDDVGRQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0105072_11212092	3300009818	Groundwater Sand	GKLDDVGRQPILVVTALRHLALRRAMLAERRTGATLGDAKLTTNMLDAGTATRRAQ*
Ga0105085_10867622	3300009820	Groundwater Sand	GRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0105064_10660343	3300009821	Groundwater Sand	GTFSPSRRQIRSTRVDQPASVPQQGRDLPVAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0105078_10419632	3300009823	Groundwater Sand	TAVLSGELDDVGRQPLLVVAALRRLTLRRAVLPERHTRAALGDAKLTTNMLNAGAATRRAQ*
Ga0105058_10741612	3300009837	Groundwater Sand	GRQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0126370_113729142	3300010358	Tropical Forest Soil	GGCQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ*
Ga0126376_123936072	3300010359	Tropical Forest Soil	DDVGRQPLLVVAALRRLALRRTVLAERRTGATPGDAKTTANMIDAGAATRRAQ*
Ga0126372_124782542	3300010360	Tropical Forest Soil	LSGKLDDVGRQPLLVVAALRRLALRRTVLAERRTGSTLGDAKTTANMIDAGAATRRAQ*
Ga0126379_123676962	3300010366	Tropical Forest Soil	LSGKLDDVGRQLLLVVAALRRLALRRAMLTERRTGATLGDAKNITNMLDAGTPTRRAQ*
Ga0134125_116253511	3300010371	Terrestrial Soil	SRYLSIAIAAVLSSKLDDVGRQPLLVIAALRHLALRRAVAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0134122_124537971	3300010400	Terrestrial Soil	AIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0137424_10631632	3300011412	Soil	AQQSRDLSIAIAAVLSGKLDDVGRQPLFVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0137463_13069513	3300011444	Soil	DVGRQPLLVVAALRHLALRRAVLAERHAGATLGNAKLTTNMLDTGTATRRAQ*
Ga0137344_10903222	3300012159	Soil	LSGKLDDVGRQPLFVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDTGAATRRAQ*
Ga0136618_102056933	3300012188	Polar Desert Sand	PGQLDDGGGQPLFIVTALRDLTLCRAMLAERRTGAALGDGQLPSNMLDAGAATRGAQ*
Ga0137435_11867842	3300012232	Soil	LSGKLDGVGRQTLLVIAALRYLALRRAVLAERRTGATLGDAKLTTNMLDAGTPTRRAQ*
Ga0136615_104591102	3300012678	Polar Desert Sand	LPHQLDEIGCQPLFIITALRDLTLRRTMLAERRTGAALGDGQLPSNMLDAGAATRGA*
Ga0157300_10895662	3300012884	Soil	AVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ
Ga0157299_102479592	3300012899	Soil	PLLVVTALRRPALRRAVLAERRTGATLGDAKLTTNMLDARATTRRAQ*
Ga0157282_102064832	3300012904	Soil	TRVGGWRCNDGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0157306_100872682	3300012912	Soil	KLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLDAGAATRRAQ*
Ga0164308_116614621	3300012985	Soil	QPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0157378_117530071	3300013297	Miscanthus Rhizosphere	PAGGAQQRRDLAVAVAAILSGKLDDVGSQPLLVVAALRRLVLRRAMLAERRTGATLGDAKLTTNMLDAGTPTRRAQ*
Ga0134078_105909912	3300014157	Grasslands Soil	FAVAIAAILPGKLDDVGRQPLLVIAALRHLALCRAMLAERRTGATLGDAKLTTNMLDTGTPTRRAQ*
Ga0157380_102361404	3300014326	Switchgrass Rhizosphere	AVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ
Ga0157380_135183281	3300014326	Switchgrass Rhizosphere	GKLDDVGRQPLLVIAALRHLALCRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0180064_11433051	3300014876	Soil	RKFDQIGHQAVFVFPAPRQLALCRAILAERRTGATLGDAKHTTNMLDAGAATRRAQ*
Ga0167642_10422982	3300015160	Glacier Forefield Soil	LPGKLDDVGRQPLLVVAALRRLALCRAMQAERRTGATLGDAKLTTNMLDAGTATRRAQ*
Ga0167652_10706621	3300015164	Glacier Forefield Soil	LPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKFTTNMLDAGTPTRRAQ*
Ga0167658_10368482	3300015195	Glacier Forefield Soil	LPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTDMLDAGTATRRAQ*
Ga0167658_10536962	3300015195	Glacier Forefield Soil	LSSELDDVGRQPLLVVAALRCLALCRAMLAERRTGATLGDAKFTTNMLDTGTATRRAQ*
Ga0132257_1016413531	3300015373	Arabidopsis Rhizosphere	DPLHSLVVDQPARVTQQSCDLSVTVAAILSGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGNAKLTTNMLDAGTPTRRAQ*
Ga0163161_115705891	3300017792	Switchgrass Rhizosphere	VAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ
Ga0184635_103964932	3300018072	Groundwater Sediment	RDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ
Ga0190272_122289522	3300018429	Soil	GQLDGVGRQPLFVLTALRNLTLRRAMLAERRTGAALGDGELPSNMLNAGAATRGA
Ga0190268_118209632	3300018466	Soil	LPGKLDDVGRQPLFVVAALRCLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ
Ga0066662_126036871	3300018468	Grasslands Soil	KLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDAKFTTNMLDAGTPTRRAQ
Ga0190271_105151052	3300018481	Soil	LPGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ
Ga0190273_100892803	3300018920	Soil	AAILPGELYDISRQPRFIITALRDLALRRAMLAERRTGTALRDGQLPSNMLDAGAAARGA
Ga0173481_100485282	3300019356	Soil	LSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ
Ga0210379_105149541	3300021081	Groundwater Sediment	LSIAIAAVLSGKLDDVGRQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLGAGTPTRRAQ
Ga0210380_100730752	3300021082	Groundwater Sediment	LPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTDMLDAGTATRRAQ
Ga0247797_10163211	3300023057	Soil	LPGELDDVGRQPLFVVAALRRLALCRAMLAERRTGATLGYAKITAYMLDTGSATRRAQ
Ga0209751_113517912	3300025327	Soil	VGSQPLVVVAALWNLALRRAVLPERRTGTALGYVKFAANMLDAGTAVCGA
Ga0207693_110856412	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKGTTNMLDAGTSTRRAQ
Ga0207649_104848983	3300025920	Corn Rhizosphere	AIAIAAILPGQLVSVGCQLLFIVAALRDLALRRAMLAERRTGTTLGNGQLASNMLDAGAATRGA
Ga0207681_111617191	3300025923	Switchgrass Rhizosphere	AGIPQQSRDLPVAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ
Ga0207681_116485273	3300025923	Switchgrass Rhizosphere	AIAAVLSGKLDDIGRQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ
Ga0207706_114987133	3300025933	Corn Rhizosphere	KLDDVGRQPLLVIAALRRLALRRAVLAERRASATLGYAKLTTNTLDAGTATRRAQ
Ga0207661_116761812	3300025944	Corn Rhizosphere	AILPGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDMQLCADLLNAGAATRGA
Ga0207712_111334032	3300025961	Switchgrass Rhizosphere	LPGELDDVGRQPLFVVAALRRLALCRAMLAERRTGATLGYAKITANMLDTGSATRRAQ
Ga0207668_121531892	3300025972	Switchgrass Rhizosphere	DVGRQPLLVVTALRHLALRRAMLAERRTGATLGDAKLTTNMLDAGTPTRRAQ
Ga0207658_121021962	3300025986	Switchgrass Rhizosphere	AILSGKLDDVGRQPLLVVTALRHLALRRAMLAERRTGATLGDAKLTTNMLDAGTPTRRAQ
Ga0207641_125683441	3300026088	Switchgrass Rhizosphere	SVTVAAILSGKLDDVGRQPLLVVAALRRPALRRAMLAERRTRATLGDAKLNANMLDAGTATRRA
Ga0209956_10848291	3300026127	Soil	PRIKSGAGCAAILAGQLDDVGGQPLFIVTAVRDLTLCRAMLAERHTGAALGDGQYPSNMLDTGAATRGA
Ga0209877_10301432	3300027032	Groundwater Sand	VAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ
Ga0208685_10257963	3300027513	Soil	LPGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRA
Ga0209874_11300953	3300027577	Groundwater Sand	AVTAVLSGELDDVGRQPLLVVAALRRLTLRRAVLPERHTRAALGDAKNATNMLDTRTPTRRAQ
Ga0208990_10818802	3300027663	Forest Soil	LPGKLDDVGCQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Ga0209118_10542971	3300027674	Forest Soil	GGAQQRCDLAVAVAAILPGKLDDVGRQPLLVVAALRCLALCRAMLAERRTGATLGDAKFTTNMLDTGTATRRAQ
Ga0209819_100750192	3300027722	Freshwater Sediment	LPGKLDDIGRQPLLVVAALRRLALCRAVLAERRTGATLGNAKLTTNMLDAGTATRRA
Ga0209069_107534591	3300027915	Watersheds	PGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDAKFTTNMLDAGTPTRRAQ
(restricted) Ga0233417_101366452	3300028043	Sediment	LPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDTGTATRRAQ
Ga0268264_124688472	3300028381	Switchgrass Rhizosphere	VGCEPLLVVAALRHLALRRAMLAERRTGATLGDAKLTTNMLDAGTPTRRAQ
Ga0247823_114083012	3300028590	Soil	RQPLLVVAALRHLALRRAMLPERRTGATLGNAKNTTNMLDTRAPTRRAQ
Ga0307282_105532493	3300028784	Soil	RFSQQSRDLAVAVAAILPGKLDDVGSQPLLVIAALRHLALCRAVVAERRTGVTLGDAKGTTNMLDAGTSTRRAQ
Ga0307310_103930562	3300028824	Soil	LPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Ga0170818_1110232443	3300031474	Forest Soil	RQPLLVVAALRRLALCRAVLAERRTGATLGYAKLTTNMLDAGTATRGAQ
Ga0310888_109517211	3300031538	Soil	KLDDVGRQPLLVVAALRHLALCRAVLAERRTGATLGDAKHTTNMLYAGTPTRRAQ
Ga0307468_1002763772	3300031740	Hardwood Forest Soil	LLLRHLQTLAPPDPLNPLVVDQPPGITQQGRDLAVAIAAVLPGEFDDVGRQPLLVVAALRRLALRRAMLPERRTGATLGNANNMTNMLDAGTPTRRAQ
Ga0307468_1006590052	3300031740	Hardwood Forest Soil	LPGELDDVGCQPLLIVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Ga0310900_110763452	3300031908	Soil	AIAIAAIMPGQLDGVGRQPLFIVAAVWDLALRRAMLAKRSTGAALGDGQLPSNMLNAGAATRGA
Ga0310889_102004862	3300032179	Soil	LSGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGTTLGNGQLASNMLDAGAATRGA
Ga0307471_1040786612	3300032180	Hardwood Forest Soil	AGVAQQSRDLSVAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLAERRTGATLGDAKGTTNMLDAGTSTRRAQ
Ga0307472_1001677382	3300032205	Hardwood Forest Soil	LPGELDDVGRQPLLVVAALRRLALRRAVLPERRTGATLGDVNNATNMLDAGTPTRRAQ
Ga0326723_0438773_9_215	3300034090	Peat Soil	MLSNTCRAWAILPGKLDDVGRQPLLVVAALRHLALRRAVLAERRASAPLGDVKLTSDMLDASAATRRA
Ga0364927_0059861_730_906	3300034148	Sediment	LPSELDDVGRQPLLVVTALRYLALRRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Ga0334925_137464_1_153	3300034173	Hypolithic Biocrust	GGQLLFIMTALRDLTLCRAMLAERSTGAALGDGELSSNMLDAGTATRGAQ
Ga0373917_0003252_962_1138	3300034692	Sediment Slurry	LPGELDDVGRQPLLVVAALRRLALRRAMLPERRAGATLGDANNATNMLDAGTPTRRAQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters