Metagenome / Metatranscriptome Family F068948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	89 residues
Representative Sequence	MSKSLQIGLLSLCLTMPTYAATHHRRDVKVVDVNAHALPPLPSSRHVVVVNSAENAPRHHGVAGMFQRLHQWHMRTRARLYRSLNR
Number of Associated Samples	95
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.43 %
% of genes near scaffold ends (potentially truncated)	14.52 %
% of genes from short scaffolds (< 2000 bps)	72.58 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.323 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.387 % of family members)
Environment Ontology (ENVO)	Unclassified (36.290 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.194 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.58% β-sheet: 5.26% Coil/Unstructured: 63.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00576	Transthyretin	10.48
PF02775	TPP_enzyme_C	4.84
PF12367	PFO_beta_C	4.03
PF13414	TPR_11	4.03
PF12345	DUF3641	3.23
PF13432	TPR_16	2.42
PF04191	PEMT	2.42
PF14559	TPR_19	2.42
PF13428	TPR_14	2.42
PF09349	OHCU_decarbox	2.42
PF13181	TPR_8	1.61
PF06993	DUF1304	1.61
PF13229	Beta_helix	1.61
PF10609	ParA	1.61
PF01855	POR_N	0.81
PF02415	Chlam_PMP	0.81
PF03683	UPF0175	0.81
PF01515	PTA_PTB	0.81
PF01274	Malate_synthase	0.81
PF00202	Aminotran_3	0.81
PF11969	DcpS_C	0.81
PF05036	SPOR	0.81
PF05198	IF3_N	0.81
PF01909	NTP_transf_2	0.81
PF02527	GidB	0.81
PF07238	PilZ	0.81
PF13620	CarboxypepD_reg	0.81
PF09586	YfhO	0.81
PF12680	SnoaL_2	0.81
PF01979	Amidohydro_1	0.81
PF04365	BrnT_toxin	0.81
PF14332	DUF4388	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2351	5-hydroxyisourate hydrolase (purine catabolism), transthyretin-related family	Nucleotide transport and metabolism [F]	10.48
COG3759	Uncharacterized membrane protein	Function unknown [S]	1.61
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	0.81
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	0.81
COG0357	16S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B)	Translation, ribosomal structure and biogenesis [J]	0.81
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.81
COG2225	Malate synthase	Energy production and conversion [C]	0.81
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.81
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.81
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.32 %
Unclassified	root	N/A	9.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.32 %
Unclassified	root	N/A	9.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.32 %
Unclassified	root	N/A	9.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.87 %
Unclassified	root	N/A	9.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.06 %
Unclassified	root	N/A	9.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.06 %
Unclassified	root	N/A	9.68 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.61 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.06 %
Unclassified	root	N/A	9.68 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.61 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.06 %
Unclassified	root	N/A	9.68 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	1.61 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.06 %
Unclassified	root	N/A	9.68 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.61 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119396675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300005171\|Ga0066677_10047898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2125	Open in IMG/M
3300005171\|Ga0066677_10366984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300005172\|Ga0066683_10538155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300005174\|Ga0066680_10048117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2494	Open in IMG/M
3300005174\|Ga0066680_10385836	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005174\|Ga0066680_10539706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300005177\|Ga0066690_10588789	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005178\|Ga0066688_10157431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1426	Open in IMG/M
3300005178\|Ga0066688_10620820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300005184\|Ga0066671_10258721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300005184\|Ga0066671_10622266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300005327\|Ga0070658_10667172	Not Available	902	Open in IMG/M
3300005334\|Ga0068869_100072455	All Organisms → cellular organisms → Bacteria	2552	Open in IMG/M
3300005335\|Ga0070666_10823514	Not Available	684	Open in IMG/M
3300005337\|Ga0070682_100487625	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005364\|Ga0070673_101344825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300005445\|Ga0070708_100157856	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300005445\|Ga0070708_100385691	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300005445\|Ga0070708_101147914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300005445\|Ga0070708_101222397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300005468\|Ga0070707_101431341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300005471\|Ga0070698_100042805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4645	Open in IMG/M
3300005534\|Ga0070735_10042478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3064	Open in IMG/M
3300005552\|Ga0066701_10623270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300005558\|Ga0066698_10014975	All Organisms → cellular organisms → Bacteria → Proteobacteria	4387	Open in IMG/M
3300005559\|Ga0066700_10003186	All Organisms → cellular organisms → Bacteria	7507	Open in IMG/M
3300005559\|Ga0066700_10008420	All Organisms → cellular organisms → Bacteria	5212	Open in IMG/M
3300005561\|Ga0066699_10220268	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	1329	Open in IMG/M
3300005561\|Ga0066699_10436066	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300005575\|Ga0066702_10033033	All Organisms → cellular organisms → Bacteria	2664	Open in IMG/M
3300005575\|Ga0066702_10468737	Not Available	770	Open in IMG/M
3300005617\|Ga0068859_102798542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300005840\|Ga0068870_10679981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300006028\|Ga0070717_10864628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300006032\|Ga0066696_10794920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300006032\|Ga0066696_10832454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300006046\|Ga0066652_101296687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300006237\|Ga0097621_101908733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006358\|Ga0068871_101453315	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300006794\|Ga0066658_10298806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300006796\|Ga0066665_10449128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300006797\|Ga0066659_10060033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2442	Open in IMG/M
3300006800\|Ga0066660_10423279	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300006871\|Ga0075434_101065431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300006903\|Ga0075426_11131079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300006904\|Ga0075424_101678983	Not Available	673	Open in IMG/M
3300009012\|Ga0066710_100011250	All Organisms → cellular organisms → Bacteria	9088	Open in IMG/M
3300009012\|Ga0066710_102901301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300009038\|Ga0099829_10182097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1692	Open in IMG/M
3300009088\|Ga0099830_10096854	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300009088\|Ga0099830_10676695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300009089\|Ga0099828_10153502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2035	Open in IMG/M
3300009089\|Ga0099828_10639898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300009089\|Ga0099828_10841225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300009137\|Ga0066709_102501940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300009147\|Ga0114129_11657634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300009148\|Ga0105243_12127650	Not Available	597	Open in IMG/M
3300011119\|Ga0105246_10499539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300011269\|Ga0137392_11338093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300011269\|Ga0137392_11556503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300011270\|Ga0137391_10143259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2081	Open in IMG/M
3300011271\|Ga0137393_10502909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300011271\|Ga0137393_10694923	Not Available	871	Open in IMG/M
3300012096\|Ga0137389_10058139	All Organisms → cellular organisms → Bacteria	2947	Open in IMG/M
3300012096\|Ga0137389_10303734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1351	Open in IMG/M
3300012189\|Ga0137388_10296433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1482	Open in IMG/M
3300012209\|Ga0137379_10818759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300012211\|Ga0137377_11410840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012922\|Ga0137394_11135711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300012924\|Ga0137413_11044096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300012958\|Ga0164299_11361374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012972\|Ga0134077_10428033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300013308\|Ga0157375_10000010	All Organisms → cellular organisms → Bacteria	361011	Open in IMG/M
3300013308\|Ga0157375_10000237	All Organisms → cellular organisms → Bacteria	51154	Open in IMG/M
3300014969\|Ga0157376_10000084	All Organisms → cellular organisms → Bacteria	71290	Open in IMG/M
3300015083\|Ga0167624_1001525	All Organisms → cellular organisms → Bacteria	4210	Open in IMG/M
3300015357\|Ga0134072_10267476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300018433\|Ga0066667_11020161	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300018468\|Ga0066662_10422892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300018468\|Ga0066662_11110624	Not Available	791	Open in IMG/M
3300018468\|Ga0066662_12874378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300018482\|Ga0066669_12448373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300019877\|Ga0193722_1044616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300021384\|Ga0213876_10026167	All Organisms → cellular organisms → Bacteria	3077	Open in IMG/M
3300023046\|Ga0233356_1000022	All Organisms → cellular organisms → Bacteria	80952	Open in IMG/M
3300024219\|Ga0247665_1015347	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300024245\|Ga0247677_1001878	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300024251\|Ga0247679_1067852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300024323\|Ga0247666_1000046	All Organisms → cellular organisms → Bacteria	65986	Open in IMG/M
3300024331\|Ga0247668_1010608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1919	Open in IMG/M
3300025903\|Ga0207680_10778756	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300025909\|Ga0207705_10483587	Not Available	961	Open in IMG/M
3300025910\|Ga0207684_10008992	All Organisms → cellular organisms → Bacteria → Acidobacteria	8858	Open in IMG/M
3300025910\|Ga0207684_10801438	Not Available	796	Open in IMG/M
3300025922\|Ga0207646_10099617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2604	Open in IMG/M
3300025922\|Ga0207646_10240564	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300025922\|Ga0207646_11021230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300025922\|Ga0207646_11718319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300025935\|Ga0207709_11360453	Not Available	587	Open in IMG/M
3300025942\|Ga0207689_10005304	All Organisms → cellular organisms → Bacteria → Proteobacteria	11549	Open in IMG/M
3300025960\|Ga0207651_11153795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300026326\|Ga0209801_1100276	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300026527\|Ga0209059_1011113	All Organisms → cellular organisms → Bacteria	4070	Open in IMG/M
3300026532\|Ga0209160_1222768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300026536\|Ga0209058_1147423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300026551\|Ga0209648_10027522	All Organisms → cellular organisms → Bacteria	4970	Open in IMG/M
3300027164\|Ga0208994_1025122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300027678\|Ga0209011_1067804	Not Available	1067	Open in IMG/M
3300027748\|Ga0209689_1376627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027846\|Ga0209180_10055043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2203	Open in IMG/M
3300027862\|Ga0209701_10681030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300027875\|Ga0209283_10135758	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300027875\|Ga0209283_10341388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300027882\|Ga0209590_10007731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4846	Open in IMG/M
3300027903\|Ga0209488_11037651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300027986\|Ga0209168_10044629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2389	Open in IMG/M
3300030902\|Ga0308202_1126399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300031962\|Ga0307479_10588361	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300032180\|Ga0307471_100450932	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300032180\|Ga0307471_101391308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300034268\|Ga0372943_0033717	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300034268\|Ga0372943_0906779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.65%
Host-Associated	Host-Associated	19.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.65%
Plants	Host-Associated → Plants	19.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.23%
Roots	Host-Associated → Plants → Roots	2.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.32%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.23%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.23%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.61%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015083	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1C, Ice margin)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1193966751	3300002568	Soil	MSISKTLQAGVLTLLLASTPVDAATHHRIHRSNVKVVDVNAHALPPLPSSRHIVVVNSAQHAPRHHGVAGMFQRLHQWHMRERAKLYRAMSR*
Ga0066677_100478982	3300005171	Soil	MRIMKSALPALLSLSLVVPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNATRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0066677_103669842	3300005171	Soil	MSSKSFQIGLLSLCLTMPVVAAPHHRSDTKVVDVNAHALPPLPSSKHVIVVNSAQNARRHHGIAGMFQRLHQWHATTRKALSRVQQVVDPSAPRR*
Ga0066683_105381552	3300005172	Soil	MSKSLKIGLLSLCLTIPAFASNTKVVDVNAHALPPPPSKRHVIVVNSAQNARRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0066680_100481172	3300005174	Soil	MSKSLKIGLLSLCLTIPTLASNTKVVDVNAHALPPAPSKRHVIVVNSAQNARRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0066680_103858362	3300005174	Soil	CEMSTKSIQMGLLSLCLITPMYASTHHRSDTKIVDVNAHALPPLPSARKHVIVVNSAQNARRHHGITGMFQRLHQFHMRQRAKLYRHLTSR*
Ga0066680_105397062	3300005174	Soil	MSTKSLQIGLLSLCMTIPTYAATHHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNARRHHGVAGMFQRLHQWHMRTRGKLYRSLNR*
Ga0066690_105887892	3300005177	Soil	MNISKTLQAGALTLLLASTPVDAATYHRIHRSDVKVVDVNAHAVPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERAKMYRAISR*
Ga0066688_101574311	3300005178	Soil	MTISRSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRAALYRSSTK*
Ga0066688_106208202	3300005178	Soil	MSSKSFQIGLLSLCLTMPVVAAPHHRSDTKVVDVNAHALPPLPSSKHVIVVNSAQNARRHHGIAGMFQRLHQWHMRQRAKLYRAFNR*
Ga0066671_102587213	3300005184	Soil	MSNKSVQIGLLSLCLTIPTYAATHHRSDTKVVDVNAHALPPLPSSRHVIVVNSAQNARRHHGIAGMFQRLHQWHM
Ga0066671_106222661	3300005184	Soil	MSNKVLQVGLLSLCMTIPTFAATHHGRDVKVVDVNAHALPPLPSSRHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0070658_106671722	3300005327	Corn Rhizosphere	MNISKTLQAGVLTLCLAAEPTFAATHHRTHRRDVKVVDVNAHVLPPLPSSRHVVVVNSAQNAPRHHGLAGMAQRLHKWHMRQRAKLYRSMSR*
Ga0068869_1000724552	3300005334	Miscanthus Rhizosphere	MKIHNAVQAGILTLCLAGTPAIAATHHHHARDVQVVDVNAHALPPGPPHARHVIVVNSAQHAPRHHGVAGMFQRLHQWHMRQRAKVYRAVTR*
Ga0070666_108235142	3300005335	Switchgrass Rhizosphere	MRITKSISVGLLSLCLAGPPAMASTHHRVTRDTEVVDVNAHVVPPLPSHARHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRQRAKVYKHLNDR*
Ga0070682_1004876251	3300005337	Corn Rhizosphere	MNISKTLQAGVLTLCLVAEPGFAATHHRTHRRDVKVVDVNAHVLPPLPSSRHVVVVNSAQNAPRHHGLAGMAQRLHKWHM
Ga0070673_1013448252	3300005364	Switchgrass Rhizosphere	MTFKTLQVGLLSFALAGSVVAAPRTHHHRAARNVQVVDVNAHVVPPGPPHAKRVIVVNSAERAPKHHGVAGMFQRLHVWHMRQRAHLYKSLYTK*
Ga0070708_1001578563	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTISRSIQVGLLSLCLVTPMSGATTHRRDVQVVDVNAHALPPPPPHARKVIVVNSAQRAPRHHGIAGMFQRLHQWHMRQRAALYRGATK*
Ga0070708_1003856913	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSNKAFQIGLLSLCMAIPTYAATHQRRDAKVVDVNAHALPPLPSSRHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRQRAKLYRGLNR*
Ga0070708_1011479142	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSKSFQIGLLSLCLTIPAVASNTKVVDVNAHALPPLPSRRHVIVVNSAQNAPRHHGVAGMFQRLHQWHMRTRAKLYRGLNR*
Ga0070708_1012223972	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNATRRHGILGMFQRLHQWHMRQRAKVYSHLTSR*
Ga0070707_1014313412	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSNKALQVGLLSLCMTIPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNARRHHGIAGMFQRLHQWHMRQRAKLYRSFNR*
Ga0070698_1000428054	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSNKAFQVGLLSLCMTIPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNARRHHGIAGMFQRLHQWHMRQRAKLYRSFNR*
Ga0070735_100424783	3300005534	Surface Soil	MSNKSIQVGLLSLCLAIPTYAAPHHRRDVKVVDVNAHALPPLPSTRAHVIVVNSAQHAPRHHGIAGMFQRLHQWHMRQRAKIYSHLVSH*
Ga0066701_106232702	3300005552	Soil	MTIQNTIQVGLLSLSLVAPAAYAAPARRNVQVVDVNAHALPPGPAHAKHVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRGSLYRSLNSK*
Ga0066698_100149753	3300005558	Soil	MTIGRSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRAAMYRSSTK*
Ga0066700_100031868	3300005559	Soil	MRIMKSALPALLSLSLIVPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNATRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0066700_100084208	3300005559	Soil	MTISRSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRAAMYRSSTK*
Ga0066699_102202682	3300005561	Soil	MSNKVLQVGLLSLCMTIPTFAATHQRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0066699_104360662	3300005561	Soil	MTIKNTIQVGLLSLSLVAPAAYAAPAQKNVQVVDVNAHALPPGPPHAKHVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRTSLYRSLNSK*
Ga0066702_100330332	3300005575	Soil	MNISKTLQAGALTLLLASTPVDAATYHRIHRSDVKVVDVNAHVVPPLPSSRRVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERARMYRAISR*
Ga0066702_104687372	3300005575	Soil	MNISKTLQAGALTLLLASTPVDAATHHRIHRSDVKVVDVNAHALPPLPSSRHVVVVNSAQRAPRHHGIAGMFQRLHQWHMRERAKLYRAMSR*
Ga0068859_1027985421	3300005617	Switchgrass Rhizosphere	RPRNVVIALHFPDLGGATMNISKTLQAGVLTLCLAAEPTFAATHHRTHRRDVKVVDVNAHVLPPLPSSRHVVVVNSAQNAPRHHGLAGMAQRLHKWHMRQRAKLYRSMSR*
Ga0068870_106799811	3300005840	Miscanthus Rhizosphere	MSISKTLQAGVLTLLLASAPVDAATHHRVHRSNAKVVDVNAHALPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRQRAKVYRAISK*
Ga0070717_108646282	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSNKALQVGLLSLCMTIPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNARRHHGIAGMFQRLHQWHMRQRAKLYRSFNQ*
Ga0066696_107949202	3300006032	Soil	MNISKTLQAGALTLLLASTPVDAATYHRIHRSNVKVVDVNAHIVPPLPSSRHVVVVNSAQHAKRHHGIAGMFQRLHQWHMRERAKMYRAISR*
Ga0066696_108324541	3300006032	Soil	MSRSIQIGLLSLCLTMPTYAATTHHRDVKVVDVNAHALPPLPSSRHVVVVNSAQNAPRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0066652_1012966871	3300006046	Soil	MTIGRSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRAPRHHGIAGMFQRLHQWHMRQRAAMYRGATK*
Ga0097621_1019087331	3300006237	Miscanthus Rhizosphere	MKVHNVVQAGILTLCLAGTPAIAATHHHSRDVQVVDVNAHALPPGPPHARHVIVVNSAQHAPRHHGVAGMFQRLHQWHMRQRAKLYRAATPR*
Ga0068871_1014533152	3300006358	Miscanthus Rhizosphere	MNISKTLQAGVLTLCLVAEPGFAATHHRTHRRDVKVVDVNAHVLPPLPSSRHVVVVNSAQNAPRHHGLAGMAQRLHKWHMRQRAKLYRSMSR*
Ga0066658_102988061	3300006794	Soil	MRIMKSALPALLSLSLVVPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNATRHHGIAGMFQRLHQWHMRTRARL
Ga0066665_104491281	3300006796	Soil	MTISRSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRARRLHGTAGIFQRLHQWHMRQRAAMYRSSTK*
Ga0066659_100600332	3300006797	Soil	MRIMKSALPALLSLSLVVPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0066660_104232792	3300006800	Soil	MNISKTLQAGALTLLLASTPVDAATYHRLHRSDVKVVDVNAHAVPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERAKMYRAISR*
Ga0075434_1010654311	3300006871	Populus Rhizosphere	MSINRVLQVGLLSLCLTAPTYAATTHHRNTQVVDVNAHALPPGPPHAKHVIVVNSAEHARRHHGMAGAFQRLHIWHMRQRAKLYKTVNSK*
Ga0075426_111310792	3300006903	Populus Rhizosphere	MSSKSIQVGLLSLCLAIPTYAATHHRRDVKVVDVNAHALPPLPSTRAHVIVVNSAQHAPRHHGIAGMFQRLHQWHMRQRAKIYSHLVSH*
Ga0075424_1016789831	3300006904	Populus Rhizosphere	MSINRVLQVGLLSLCLTAPSYAATTHHYRSTQVVDVNAHALPPAPAHAKHVVVVNSATHAKRHHGLAGAFQRLHIWHMRQRANLYKTLNSR*
Ga0066710_1000112503	3300009012	Grasslands Soil	MSKSLKIGLLSLCLTIPAFASNTKVVDVNAHALPPPPSKRHVIVVNSAQNARRHHGIAGMFQRLHQWHMRTRARLYRSLNR
Ga0066710_1029013012	3300009012	Grasslands Soil	MSSKSFQIGLLSLCLTMPVVASPHHRSDTKVVDVNAHALPPLPSSKHVIVVNSAQNARRHHGIAGMFQRLHQWHMRQRAKLYRAFNR
Ga0099829_101820973	3300009038	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNASRHHGIAGMFQRLHQWHMRQRAKLYSHLTSR*
Ga0099830_100968543	3300009088	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRQRAKVYSHLTSR*
Ga0099830_106766952	3300009088	Vadose Zone Soil	VGLLSLCLVTPMSGATTHRRDVQVVDVNAHALPPPPPHARKVIVVNSAQRAPRHHGIAGMFQRLHQWHMRQRAAMYRSATK*
Ga0099828_101535022	3300009089	Vadose Zone Soil	MSKSIQIGLLSLCLAIPAVASNTKVVDVNAHAYPPLPSRRHVIVVNSAQNARRHHGVAGMFQRLHQWHMRSRAWLYRSLNR*
Ga0099828_106398982	3300009089	Vadose Zone Soil	MTVSRSIQVGLLSLCLVTPMSGATTHRRDVQVVDVNAHALPPPPPHARKVIVVNSAQRAPRHHGIAGMFQRLHQWHMRQRAATYRSATK*
Ga0099828_108412252	3300009089	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNAPRRYGIAGMFQRLHQWHMRQRAKLYSHLTSR*
Ga0066709_1025019402	3300009137	Grasslands Soil	MTISRSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRA
Ga0114129_116576342	3300009147	Populus Rhizosphere	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVADVNAHALPPLPSTRKHVIVVNSAQNATRRHGILGMFQRLHQWHMRQRAKVYSHLTSR*
Ga0105243_121276501	3300009148	Miscanthus Rhizosphere	MNISKTLQAGALTLLLASAPAYATTHHHRSDTKVVDVNAHVYPPLPSSRHVVVVNSAQHARRHHGVAGMFQRLHKWHMRERAKLYRAISH*
Ga0105248_111026162	3300009177	Switchgrass Rhizosphere	AAEPTFAATHHRTHRRDVKVVDVNAHVLPPLPSSRHVVVVNSAQNAPRHHGLAGMAQRLHKWHMRQRAKLYRSMSR*
Ga0105246_104995392	3300011119	Miscanthus Rhizosphere	MNISKTLQAGALTLLLASTPVDAATHHRVHRKDVKVVDVNAHVVPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERAKMYRAISR*
Ga0137392_113380931	3300011269	Vadose Zone Soil	MSKSLQIGLLSLCLTMPTYAATHHRRDVKVVDVNAHALPPLPSSRHVVVVNSAENAPRHHGVAGMFQRLHQWHMRTRARLYRSLNR*
Ga0137392_115565032	3300011269	Vadose Zone Soil	MTVSRSIQVGLLSLCLVTPMSGATTHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQNARRHHGLAGMFQRLHQWHMRQRAHLYRSFTK*
Ga0137391_101432591	3300011270	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNAPRRHGILGMFQRLHQWHMRQRAKVYSHLTSR*
Ga0137393_105029091	3300011271	Vadose Zone Soil	VGLLSLCLVTPMSGATTHRRDVQVVDVNAHALPPPPPHARKVIVVNSAQRAPRHHGIAGMFQRLHQWHMRQRAATYRSATK*
Ga0137393_106949232	3300011271	Vadose Zone Soil	MNINRTVQAGILTLCLAGTPAALAAPQHHRNTEVVDVNASVLPPGPPHARHVIVVNSARYAPRRHGVAGMFQRLHQWHMRQRASIYRSVTPR*
Ga0137389_100581393	3300012096	Vadose Zone Soil	MNKSLQIGLLSLSLTAPLFAGTKVVDVNAHALPPLPSSRHVVVVNSAQRAPKRHHGIAGMFERLHKWHMRQRANVYRSMSK*
Ga0137389_103037342	3300012096	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNAPRRHGIAGMFQRLHQWHMRQRAKLYSHLTSR*
Ga0137388_102964332	3300012189	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSMRKHVIVVNSAQNAPRRHGIAGMFQRLHQWHMRQRAKLYSHLTSR*
Ga0137379_108187592	3300012209	Vadose Zone Soil	MSNKAIQIGLLSLCMTIPTFAATHHRRDTKVVDVNAHALPPLPSSRHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRQRAKLYRGLNR*
Ga0137377_114108402	3300012211	Vadose Zone Soil	MTIGRSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRAQRHHGIAGMFQRLHQWHMRQRAAMYRGATK*
Ga0137394_111357111	3300012922	Vadose Zone Soil	MSKVLQIGLLSLCLTMPTYAATHHRDVKVVDVNAHALPPPPSSRHVVVVNSAQNARRHHGIAGMFQRLHQWHMRSRARLYRSLNR*
Ga0137413_110440962	3300012924	Vadose Zone Soil	AGILTLCLAGTPAIAATHHHHARDVQVVDVNAHALPPGPPHARHVVVVNSAQHAPHHHGVAGMFQRLHQWHMRQRAKVYRAVTPR*
Ga0164299_113613741	3300012958	Soil	GGATMNISKTLQAGALTLLLASTPVDAATHHRVHRDVKVVDVNAHVVPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERAKMYRTISR*
Ga0134077_104280331	3300012972	Grasslands Soil	MSKSLKIGLLSLCLTIPAFASNTKVVDVNAHAIPPPPSKRHVIVVNSAQNARRHHGIAGMFQRLHQWHMRTRARLYRSLNR*
Ga0157375_1000001020	3300013308	Miscanthus Rhizosphere	VAKALHFFIAGGASMKVHNVVQAGILTLCLAGTPAIAATHHHSRDVQVVDVNAHALPPGPPHARHVIVVNSAQHAPRHHGVAGMFQRLHQWHMRQRAKLYRAATPR*
Ga0157375_1000023733	3300013308	Miscanthus Rhizosphere	MNISKTLQAGALTLLLASTPVDAATHHRVHRSDVKVVDVNAHVVPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERAKMYRAISK*
Ga0157376_1000008447	3300014969	Miscanthus Rhizosphere	MIISKTLQAGALTLLLASTPVDAATHHRVHRSDVKVVDVNAHVVPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERAKMYRAISK*
Ga0167624_10015252	3300015083	Glacier Forefield Soil	MNMKLHNALTATVLSVCLAGPMTATTRHHHYTRSGNDTQVVDVNAHAVPPGPPDARHVIVVNSAQHAPRRHGLAGAFQRLHKWHMRQRAAIYRGVTK*
Ga0134072_102674761	3300015357	Grasslands Soil	MSKSHQIGLLSLCLTVPTYAATHHRDVKVVDVNAHALPPLPSSRHVVVVNSAQNARRHHGIAGMFQRLHQWHMRTRARLYRS
Ga0066667_110201611	3300018433	Grasslands Soil	MSIIKSVQVGLLSLALAAPVYAAPRHKAHHRVVRDVQVVDVNAHALPPGPPHAKHVVVVNSAVHARRHHGIAGAFQRLHVWHMRQRAKLYRSLTPR
Ga0066662_104228923	3300018468	Grasslands Soil	MSTKSLQIGLLSLCMTIPTYAATHHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNARRHHGVAGMFQRLHQWHMRTRGKLYRSLNR
Ga0066662_111106243	3300018468	Grasslands Soil	MNISKTLQAGALTLLLASTPVDAATHHRIHRSDVKVVDVNAHALPPLPSSRHVVVVNSAQRAPRHHGIAGMFQRLHQWHMRERAKLYRAMSR
Ga0066662_128743781	3300018468	Grasslands Soil	MNISKILQAGALTLLLASTPVDAATDHRIHRSDVKVVDVNAHVVPPLPSSRRVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERARMYRAISR
Ga0066669_124483732	3300018482	Grasslands Soil	MSKSLQIGLLSLCLTMLTYAATHHRDAKVVDVNAHALPPLPSSRHVVVVNSAQNAPRHHGIAGMFQRLHQWHMRTRARLYRSLNR
Ga0193722_10446162	3300019877	Soil	MNINRTVQAGILTLCLAGAPASLAAPPHHRNTEVVDVNAHVLPPGPPHARHVIVVNSAQHAPRRHGVAGMFQRLHQWHMRQRAHIYRAVTPR
Ga0213876_100261672	3300021384	Plant Roots	MNISKTLQTGALTLLLASTPVDAATHHRVHRSDVKVVDVNAHVVPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERAKMYRALSR
Ga0233356_100002259	3300023046	Soil	MNISKTLQAGALTLLLASTPVDAATHHRVHRSDVKVVDVNAHALPPLPSSRHVVVVNSAQHAKRHHGVVGMFQRLHKWHMRERAKMYRAISR
Ga0247665_10153472	3300024219	Soil	MKIHKAVQAGILTLCLAGTPAIAATHDHSRDVQVVDVNAHALPPGPPHARHVIVVNSAQHAPRHHGVAGMFQRLHQWHMRQRAKLYRAATR
Ga0247677_10018783	3300024245	Soil	MNINRTVQAGILTLCLAGTPAALAAPQYHRNAEVVDVNAHVLPPGPPHARHVIVVNSAQHAPRHHGVAGMFQRLHQWHMRQRASIYRAVTRR
Ga0247679_10678522	3300024251	Soil	INRTVQAGILTLCLAGTPAALAAPQYHRNTEVVDVNAHVLPPGPPHARHVIVVNSAQRAPRHHGVAGMFQRLHQWHMRQRASIYRAVTRR
Ga0247666_100004644	3300024323	Soil	MNINRTVQAGILTLCLAGTPAALAAPQYHRNAEVVDVNAHLLPPGPPHARHVIVVNSAQHAPRHHGVAGMFQRLHQWHMRQRASIYRAVTRR
Ga0247668_10106082	3300024331	Soil	MNINRTVQAGILTLCLAGTPAALAAPQYHRNTEVVDVNASVLPPGPPHARHVIVVNSAQRAPRHHGVAGMFQRLHQWHMRQRASIYRAVTRR
Ga0207680_107787562	3300025903	Switchgrass Rhizosphere	MRITKSISVGLLSLCLAGPPAMASTHHRVTRDTEVVDVNAHVVPPLPSHARHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRQRAKVYKHLNDR
Ga0207705_104835873	3300025909	Corn Rhizosphere	MNISKTLQAGVLTLCLAAEPTFAATHHRTHRRDVKVVDVNAHVLPPLPSSRHVVVVNSAQNAPRHHGLAGMAQRLHKWHMRQRAKLYRSMSR
Ga0207684_100089927	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSKSFQIGLLSLCLTIPAVASNTKVVDVNAHALPPLPSRRHVIVVNSAQNAPRHHGVAGMFQRLHQWHMRTRAKLYRGLNR
Ga0207684_108014382	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ISRSIQVGLLSLCLVTPMSGATTHRRDVQVVDVNAHALPPPPPHARKVIVVNSAQRAPRHHGIAGMFQRLHQWHMRQRAALYRGATK
Ga0207646_100996174	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSISRSIQVGLLSLCLVTPMSGATTHRRDVQLVDVNAHALPPPPPHARKVIVVNSAQRAPRHHGIAGMFQRLHQWHMRQRAALYRGATK
Ga0207646_102405642	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNATRRHGILGMFQRLHQWHMRQRAKVYSHLTSR
Ga0207646_110212302	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSNKALQVGLLSLCMTIPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNARRHHGIAGMFQRLHQWHMRQRAKLYRSFNR
Ga0207646_117183191	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSTKSIQIGLLSLCLTMPVYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNATRRHGILGMFQRLHQWHMRQRAKVYSHLTSR
Ga0207709_113604531	3300025935	Miscanthus Rhizosphere	MNISKTLQAGALTLLLASAPAYATTHHHRSDTKVVDVNAHVYPPLPSSRHVVVVNSAQHARRHHGVAGMFQRLHKWHMRERAKLYRAISH
Ga0207689_100053047	3300025942	Miscanthus Rhizosphere	MKIHNAVQAGILTLCLAGTPAIAATHHHHARDVQVVDVNAHALPPGPPHARHVIVVNSAQHAPRHHGVAGMFQRLHQWHLRQRAKVYRVVTPR
Ga0207651_111537952	3300025960	Switchgrass Rhizosphere	MTFKTLQVGLLSFALAGSVVAAPRTHHHRAARNVQVVDVNAHVVPPGPPHAKRVIVVNSAERAPKHHGVAGMFQRLHVWHMRQRAHLYKSLYTK
Ga0209801_11002762	3300026326	Soil	MRIMKSALPALLSLSLVVPTYAATHHRRDVKVVDVNAHALPPLPSSRHVIVVNSAQNATRHHGIAGMFQRLHQWHMRTRARLYRSLNR
Ga0209059_10111132	3300026527	Soil	MNISKTLQAGALTLLLASTPVDAATYHRIHRSDVKVVDVNAHVVPPLPSSRRVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERARMYRAISR
Ga0209160_12227682	3300026532	Soil	MTIQNTIQVGLLSLSLVAPAAYAAPARRNVQVVDVNAHALPPGPAHAKHVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRGSLYRSLNSK
Ga0209058_11474232	3300026536	Soil	MTIGRSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRAAMYRSSTK
Ga0209648_100275223	3300026551	Grasslands Soil	MSKSLQIGLLSLCLTMPTYAATHHRRDVKVVDVNAHALPPLPSSRHVVVVNSAENAPRHHGVAGMFQRLHQWHMRTRARLYRSLNR
Ga0208994_10251221	3300027164	Forest Soil	MNISKTLQAGVLTLCLASAPAYATTTMYHHRKDTKVVDVNAHAYPPLPSSRHVIVVNSAQHAQKHYGVVGMFQRLHQWHMRERAKLYRAVSR
Ga0209011_10678042	3300027678	Forest Soil	MTFNKGLQIGILSFALAGSAFAAPERRDVQVVDVNRHIIPPGPPHARHVVIVNSAERAPRHHGVAGAFQRLHIWHMRQRAKIYRSVVSH
Ga0209689_13766271	3300027748	Soil	RSIQVGLLSLCLVTPMSGATMHRRDVQVVDVNAHALPPGPPHAKKVIVVNSAQRARRHHGIAGMFQRLHQWHMRQRAAMYRSSTK
Ga0209180_100550431	3300027846	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSMRKHVIVVNSAQNAPRRHGILGMFQRLHQWHMRQRAKLYSHLTSR
Ga0209701_106810301	3300027862	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRQRAKVYSHLTSR
Ga0209283_101357582	3300027875	Vadose Zone Soil	MSKSIQIGLLSLCLAIPAVASNTKVVDVNAHAYPPLPSRRHVIVVNSAQNARRHHGVAGMFQRLHQWHMRSRAWLYRSLNR
Ga0209283_103413883	3300027875	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNAPRRYGIAGMFQRLH
Ga0209590_100077312	3300027882	Vadose Zone Soil	MSTKSIQIGLLSLCLTMPMYAAPRHHSDTKVVDVNAHALPPLPSTRKHVIVVNSAQNAPRRHGILGMFQRLHQWHMRQRAKVYSHLTSR
Ga0209488_110376511	3300027903	Vadose Zone Soil	MNISKTLQAGALTLLLASTPVDAATHHRIHRSDTKVVDVNAHVVPPLPSSRHVVVVNSAQHAKRHHGVAGMFQRLHQWHMRERAKMYRAISR
Ga0209168_100446294	3300027986	Surface Soil	MSNKSIQVGLLSLCLAIPTYAAPHHRRDVKVVDVNAHALPPLPSTRAHVIVVNSAQHAPRHHGIAGMFQRLHQWHMRQRAKIYSHLVSH
Ga0308202_11263991	3300030902	Soil	INRTVQAGILTLCLAGTPLAFAAPQHHRDTQVVDVNAHALPPGPPHAKHVIVVNSAQHARRHHGVAGMFQRLQQWHMRQRANVYRAVTPR
Ga0307479_105883611	3300031962	Hardwood Forest Soil	MSNKTIQVGLLSLCMTIPAFAAPQHRSDVKVVDVNAHALPPLPSSRHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRQRAKLYRSFNR
Ga0307471_1004509322	3300032180	Hardwood Forest Soil	MSNKALQIGLLSLCMTIPSYAATHHRRDTKVVDVNAHALPPLPSSRHVIVVNSAQNAPRHHGIAGMFQRLHQWHMRQRAKLYRGLNR
Ga0307471_1013913081	3300032180	Hardwood Forest Soil	MTIKNTIQVGLLSLSLVAPAYAAPAQRNVQVVDVNAHALPPGPPHAKHVIVVNSAQRARRRHGVAGMFQRLHQWHMRQRAGLYRSLN
Ga0372943_0033717_1103_1381	3300034268	Soil	MNLSKTLQAGALALLLTSVPVDAATHHRIHRSNVKVVDVNAHILPPLPSSRHVVVVNSAQHARRHHGVAGMFQRLHQWHMRQRAKMYRAMSW
Ga0372943_0906779_44_322	3300034268	Soil	MSISKTLQAGVLTLLLASTPVDAATHHRIHRSNVKVVDVNAHALPPLPSSRHVVVVNSAQHAPRHHGVAGMFQRLHQWHMRERAKLYRTMSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences