Metagenome Family F068930

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068930
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	42 residues
Representative Sequence	MATYKGIQGYSVQKLSSDPTASEAEGQLWYNSTSGKFKI
Number of Associated Samples	72
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.39 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	97.58 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.097 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (43.548 % of family members)
Environment Ontology (ENVO)	Unclassified (93.548 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.871 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.48% β-sheet: 8.96% Coil/Unstructured: 86.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07880	T4_gp9_10	7.26
PF02700	PurS	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.94 %
Unclassified	root	N/A	33.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.90 %
Unclassified	root	N/A	33.06 %
Viruses	superkingdom	All Organisms → Viruses	4.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.10 %
Unclassified	root	N/A	33.06 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	4.03 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.19 %
Unclassified	root	N/A	33.06 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.84 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	4.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49.19 %
Unclassified	root	N/A	33.06 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.03 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	4.03 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.61 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	20.16 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.03 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	4.03 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.61 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.81 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.81 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	20.16 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	4.03 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	4.03 %
Verrucomicrobia bacterium SCGC AAA164-I21	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I21	1.61 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.81 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.81 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	20.16 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	4.03 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	4.03 %
Verrucomicrobia bacterium SCGC AAA164-I21	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I21	1.61 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.81 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.81 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	20.16 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	4.03 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3.23 %
Verrucomicrobia bacterium SCGC AAA164-I21	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I21	1.61 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.81 %
Epulopiscium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Epulopiscium	0.81 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.81 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	20.16 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	4.03 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	3.23 %
Verrucomicrobia bacterium SCGC AAA164-I21	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I21	1.61 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.81 %
unclassified Epulopiscium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Epulopiscium → unclassified Epulopiscium	0.81 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.81 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	20.16 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	4.03 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	3.23 %
Verrucomicrobia bacterium SCGC AAA164-I21	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I21	1.61 %
Epulopiscium sp. SCG-B11WGA-EpuloA1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Epulopiscium → unclassified Epulopiscium → Epulopiscium sp. SCG-B11WGA-EpuloA1	0.81 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.81 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.81 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001717\|JGI24522J20083_1009445	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300002511\|JGI25131J35506_1026886	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300002511\|JGI25131J35506_1038223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I21	663	Open in IMG/M
3300002511\|JGI25131J35506_1040971	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300002511\|JGI25131J35506_1047674	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300002511\|JGI25131J35506_1059165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I21	532	Open in IMG/M
3300002760\|JGI25136J39404_1046751	Not Available	801	Open in IMG/M
3300002760\|JGI25136J39404_1068561	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300002760\|JGI25136J39404_1089247	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005969\|Ga0066369_10146359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300006013\|Ga0066382_10280134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300006310\|Ga0068471_1347873	Not Available	2383	Open in IMG/M
3300006310\|Ga0068471_1381999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	968	Open in IMG/M
3300006310\|Ga0068471_1520589	Not Available	1317	Open in IMG/M
3300006310\|Ga0068471_1653797	Not Available	1544	Open in IMG/M
3300006325\|Ga0068501_1145782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300006336\|Ga0068502_1146994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	652	Open in IMG/M
3300006336\|Ga0068502_1191380	Not Available	1377	Open in IMG/M
3300006336\|Ga0068502_1224161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1484	Open in IMG/M
3300006336\|Ga0068502_1350949	Not Available	823	Open in IMG/M
3300006336\|Ga0068502_1521828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300006336\|Ga0068502_1916621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	605	Open in IMG/M
3300006338\|Ga0068482_1214366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300006338\|Ga0068482_1819010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300006338\|Ga0068482_1905825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300006338\|Ga0068482_1909780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300006340\|Ga0068503_10333775	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300006340\|Ga0068503_10393331	Not Available	885	Open in IMG/M
3300006340\|Ga0068503_10400113	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2035	Open in IMG/M
3300006340\|Ga0068503_10417190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1300	Open in IMG/M
3300006340\|Ga0068503_10518180	Not Available	1098	Open in IMG/M
3300006340\|Ga0068503_10526953	Not Available	1082	Open in IMG/M
3300006340\|Ga0068503_10536804	Not Available	897	Open in IMG/M
3300006340\|Ga0068503_10554933	Not Available	599	Open in IMG/M
3300006340\|Ga0068503_10557207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	545	Open in IMG/M
3300006340\|Ga0068503_10560484	Not Available	1238	Open in IMG/M
3300006340\|Ga0068503_10579067	All Organisms → Viruses → environmental samples → uncultured marine virus	1166	Open in IMG/M
3300006340\|Ga0068503_10604332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300006340\|Ga0068503_10605031	All Organisms → Viruses → environmental samples → uncultured marine virus	902	Open in IMG/M
3300006340\|Ga0068503_10996792	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	592	Open in IMG/M
3300006414\|Ga0099957_1248413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300006567\|Ga0099958_1274768	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	760	Open in IMG/M
3300006726\|Ga0098070_106939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	628	Open in IMG/M
3300006736\|Ga0098033_1044130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1320	Open in IMG/M
3300006753\|Ga0098039_1078604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1141	Open in IMG/M
3300006753\|Ga0098039_1184898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	708	Open in IMG/M
3300006753\|Ga0098039_1192335	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	692	Open in IMG/M
3300006753\|Ga0098039_1252437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	593	Open in IMG/M
3300006754\|Ga0098044_1279643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	642	Open in IMG/M
3300006768\|Ga0098071_123627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300006789\|Ga0098054_1278476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300006921\|Ga0098060_1062703	Not Available	1083	Open in IMG/M
3300006926\|Ga0098057_1088196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300006926\|Ga0098057_1125172	Not Available	627	Open in IMG/M
3300006928\|Ga0098041_1095106	Not Available	962	Open in IMG/M
3300008051\|Ga0098062_1033737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300008416\|Ga0115362_100087850	Not Available	686	Open in IMG/M
3300008624\|Ga0115652_1095279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	956	Open in IMG/M
3300009370\|Ga0118716_1114913	Not Available	1381	Open in IMG/M
3300009409\|Ga0114993_11282563	Not Available	514	Open in IMG/M
3300009414\|Ga0114909_1172352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300009602\|Ga0114900_1100267	Not Available	795	Open in IMG/M
3300009613\|Ga0105228_128042	Not Available	518	Open in IMG/M
3300009622\|Ga0105173_1055647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	674	Open in IMG/M
3300009622\|Ga0105173_1079948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300009786\|Ga0114999_10109428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Epulopiscium → unclassified Epulopiscium → Epulopiscium sp. SCG-B11WGA-EpuloA1	2393	Open in IMG/M
3300009791\|Ga0105235_131558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	554	Open in IMG/M
3300010149\|Ga0098049_1169649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	672	Open in IMG/M
3300010151\|Ga0098061_1301072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	551	Open in IMG/M
3300010153\|Ga0098059_1154901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300010155\|Ga0098047_10353510	Not Available	552	Open in IMG/M
3300010330\|Ga0136651_10624808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300013098\|Ga0164320_10460752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300013101\|Ga0164313_11240626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300020434\|Ga0211670_10510864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300021791\|Ga0226832_10175017	Not Available	827	Open in IMG/M
(restricted) 3300024520\|Ga0255047_10603678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300025043\|Ga0207907_108520	Not Available	990	Open in IMG/M
3300025045\|Ga0207901_1012067	Not Available	1204	Open in IMG/M
3300025046\|Ga0207902_1019892	All Organisms → Viruses → environmental samples → uncultured marine virus	785	Open in IMG/M
3300025046\|Ga0207902_1048550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	531	Open in IMG/M
3300025049\|Ga0207898_1045413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300025050\|Ga0207892_1025665	Not Available	668	Open in IMG/M
3300025052\|Ga0207906_1017579	Not Available	995	Open in IMG/M
3300025069\|Ga0207887_1031035	Not Available	859	Open in IMG/M
3300025069\|Ga0207887_1032450	All Organisms → Viruses → environmental samples → uncultured marine virus	841	Open in IMG/M
3300025085\|Ga0208792_1093013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	529	Open in IMG/M
3300025112\|Ga0209349_1162894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	592	Open in IMG/M
3300025125\|Ga0209644_1046894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	984	Open in IMG/M
3300025125\|Ga0209644_1048205	Not Available	972	Open in IMG/M
3300025125\|Ga0209644_1163495	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	530	Open in IMG/M
3300025131\|Ga0209128_1090620	Not Available	1006	Open in IMG/M
3300025131\|Ga0209128_1092414	Not Available	991	Open in IMG/M
3300025133\|Ga0208299_1109399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	921	Open in IMG/M
3300025133\|Ga0208299_1120467	Not Available	860	Open in IMG/M
3300025241\|Ga0207893_1059002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	552	Open in IMG/M
3300025247\|Ga0207880_1050740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	614	Open in IMG/M
3300025248\|Ga0207904_1054478	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	673	Open in IMG/M
3300025260\|Ga0207895_1071359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	559	Open in IMG/M
3300025264\|Ga0208029_1098594	Not Available	532	Open in IMG/M
3300025264\|Ga0208029_1103877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300025873\|Ga0209757_10060020	Not Available	1126	Open in IMG/M
3300025873\|Ga0209757_10156058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300025873\|Ga0209757_10225056	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	595	Open in IMG/M
3300025873\|Ga0209757_10243228	Not Available	571	Open in IMG/M
3300025873\|Ga0209757_10255762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	556	Open in IMG/M
3300026103\|Ga0208451_1038648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	579	Open in IMG/M
(restricted) 3300027865\|Ga0255052_10527319	Not Available	579	Open in IMG/M
3300028190\|Ga0257108_1074934	Not Available	1010	Open in IMG/M
3300028535\|Ga0257111_1114802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	842	Open in IMG/M
3300031802\|Ga0310123_10716446	Not Available	606	Open in IMG/M
3300031804\|Ga0310124_10117239	Not Available	1650	Open in IMG/M
3300031811\|Ga0310125_10417129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300032820\|Ga0310342_100912950	Not Available	1024	Open in IMG/M
3300032820\|Ga0310342_103122775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300033742\|Ga0314858_151394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300034629\|Ga0326756_015830	Not Available	871	Open in IMG/M
3300034629\|Ga0326756_019715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300034629\|Ga0326756_022676	All Organisms → Viruses → environmental samples → uncultured marine virus	740	Open in IMG/M
3300034629\|Ga0326756_046354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300034654\|Ga0326741_039429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300034654\|Ga0326741_076146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	554	Open in IMG/M
3300034695\|Ga0372840_161992	Not Available	667	Open in IMG/M
3300034695\|Ga0372840_257370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.19%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	86.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.65%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	3.23%
Coastal	Environmental → Aquatic → Marine → Coastal	2.42%
Inlet	Environmental → Aquatic → Marine → Inlet	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	61.29%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	23.39%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.42%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	2.42%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.61%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.61%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	43.55%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	23.39%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	6.45%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	4.84%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.03%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	4.03%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.23%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.61%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.61%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.61%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.61%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.81%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.81%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.81%
Marine Hydrothermal Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent	0.81%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001717	Marine viral communities from the Pacific Ocean - LP-47	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300006726	Marine viral communities from Cariaco Basin, Caribbean Sea - 28_WHOI_OMZ	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006768	Marine viral communities from Cariaco Basin, Caribbean Sea - 29_WHOI_OMZ	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300008051	Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZ	Environmental	Open in IMG/M
3300008416	Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12B	Environmental	Open in IMG/M
3300008624	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 250-2.7um	Environmental	Open in IMG/M
3300009370	Combined Assembly of Gp0127930, Gp0127931	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009613	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3737_250	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300009791	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300010330	Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaG	Environmental	Open in IMG/M
3300013098	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cm	Environmental	Open in IMG/M
3300013101	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm	Environmental	Open in IMG/M
3300020434	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555944-ERR599071)	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300024520 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1	Environmental	Open in IMG/M
3300025043	Marine viral communities from the Subarctic Pacific Ocean - LP-52 (SPAdes)	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025049	Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)	Environmental	Open in IMG/M
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental	Open in IMG/M
3300025247	Marine viral communities from the Deep Pacific Ocean - MSP-91 (SPAdes)	Environmental	Open in IMG/M
3300025248	Marine viral communities from the Deep Pacific Ocean - MSP-118 (SPAdes)	Environmental	Open in IMG/M
3300025260	Marine viral communities from the Deep Pacific Ocean - MSP112 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026103	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)	Environmental	Open in IMG/M
3300027865 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24522J20083_10094452	3300001717	Marine	MATYKGIQGYSVQSLTSDPTAENTIGQLWYNSDSGKFKYSTEGAGAWA
JGI25131J35506_10268862	3300002511	Marine	MATYKGIQGYSVQKLSSDPTAEDTVGQLWYNSTSGKFKIAVEGA
JGI25131J35506_10382232	3300002511	Marine	MATYKGIQGYSVQNLSSDPTASEAVGQLWYNSAAGKFKLGVEGAGAWA
JGI25131J35506_10409712	3300002511	Marine	MATYKGIQGYSVQKLSSDPTASEAAGQLFYNSTSGKFKVGTEGAGAWSSA
JGI25131J35506_10476741	3300002511	Marine	MAXYKGIQGYSVQKLSSDPTASEAEGQLWYNSSTAKFKIA
JGI25131J35506_10591652	3300002511	Marine	MADYKGIQGYLVQKLSSDPTASEVKGQLWYNSATGKFKIGTA
JGI25136J39404_10467512	3300002760	Marine	MATYKGIQGYSVQTLASDPSPTASVEGQLWFNSTSSTYKIAIGSAGAWAAGTA
JGI25136J39404_10685612	3300002760	Marine	MATYKGIQGYTVQKLSSDPTASEVEGQLWYNSSLGKFKIGVAGAGAWASGG
JGI25136J39404_10892471	3300002760	Marine	MATYKGIQGSSVQKLSSDPTASEAVGQLWYNSTTGKFKVAVSG
Ga0066369_101463591	3300005969	Marine	MAKYKGIQGYTVQSLSTDPTASSNTEGQLWYNSDSGAFKIAVSAG
Ga0066382_102801341	3300006013	Marine	MATYKGIKGESVQTLASDPSPTQKVEGQLWYNSTAGSYKIAINAGGTW
Ga0068471_13478734	3300006310	Marine	MATYKGIQGYTVQKLSDDPTASEAAGQLWYNSGAGKFKVGTEGA
Ga0068471_13819991	3300006310	Marine	MATYKGIQGYTVQKLSEDPTASEVAGQLWYNSGTGKFKISVGSA
Ga0068471_15205892	3300006310	Marine	MATYKGIQGYSVQKLSSDPTVEDTVGQLWYNSTSGAFKI
Ga0068471_16537973	3300006310	Marine	MATYKGIQGYSVQKLSSDPTASEAAGQLFYNSTSGKFKVGTE
Ga0068501_11457821	3300006325	Marine	MATYKGIQGYTVQKLSEDPTASEAVGQLWYNSGTGAFKMGTEGA
Ga0068502_11469942	3300006336	Marine	MATYKGIQGYTVQNLATDPTVEDTVGQLWYNSTAG
Ga0068502_11913801	3300006336	Marine	MATYKGIQGYSVQKLSDDPTAAEAVGQLWYNSGTGKFK
Ga0068502_12241611	3300006336	Marine	MTTYKGIQGYSVQKLSSDPTASEAVGQLWYNSTAGKFK
Ga0068502_13509491	3300006336	Marine	MATYKGIQGYSVQKLSSDPTASEAVGQLWYNSEEGKFKVGT
Ga0068502_15218282	3300006336	Marine	MATYKGIQGYSVQKLATDPTASEAGGQLWYNSTSGTYK
Ga0068502_19166212	3300006336	Marine	MGDYKGIQGFTWQKGAADPTNTIAGQVWYNSTSGKFKIA
Ga0068482_12143661	3300006338	Marine	MADYKGIQGYSVQKLSDDPTASEVEGQLWYNSGTGKFKIGVAA
Ga0068482_18190102	3300006338	Marine	MATYKGIQGYSVQKLSSDPPGAGSVGQLWYNSTSGK
Ga0068482_19058252	3300006338	Marine	MATYKGIQGYSVQKLSSDPTVANTVGQLWYNSTSGK
Ga0068482_19097802	3300006338	Marine	MATYKGIQGYSVQKLSSDPTAEDTVGQLWYNSTSG
Ga0068503_103337751	3300006340	Marine	MATYKGIQGYSVQKLSSDPTASEAEGQLWYNSTSGKFKI
Ga0068503_103933312	3300006340	Marine	MATYKGIQGYSVQSLGSDPSPAASVEGQLWYNSTA
Ga0068503_104001131	3300006340	Marine	MATYKGIQGYSVQKLSSDPTAANVEGQLWYNSTSGAFKV
Ga0068503_104171904	3300006340	Marine	MATYKGIQGYSVQSLASDPTASEVGGQLWYNSTSGAFK
Ga0068503_105181801	3300006340	Marine	MATYKGIQGYSVQKLSSDPTASEAGGQLWYNSTSGAFKI
Ga0068503_105269532	3300006340	Marine	MATYKGIQGYSVQKLATDPPAAQSVGQLWYNSTSGAFK
Ga0068503_105368042	3300006340	Marine	MADYKGIQGYSVQTLASDPSPTASVEGQLWYNSTSGSYKISVGAAGAWAATPNIN
Ga0068503_105549332	3300006340	Marine	MATYKGIQGYSVQVLSSDPTASEATGQLWYNSTSGTFK
Ga0068503_105572071	3300006340	Marine	MATYKGIQGYSVQKLSSDPTPTASVEGQLWYNSTSGKFN
Ga0068503_105604841	3300006340	Marine	MATYKGIQGYSVQKLSSDPTAGSGSDGQLWYNSTSGKFKITVAGTGAWASIN
Ga0068503_105790672	3300006340	Marine	MATYKGIQGYSVQTLASDPSPTASVEGQLWYNSTGGV
Ga0068503_106043323	3300006340	Marine	MATYKGIQGYSVQTLASDPGTLSAVEGQLWYNSTSSTYKIAV
Ga0068503_106050312	3300006340	Marine	MATYKGIQGYSVQTLASDPSPTASVEGQLWYNSTSSTYKIA
Ga0068503_109967921	3300006340	Marine	MATYKGIQGYTVQKLSSDPTASETAGQLWYNSTSGAFK
Ga0099957_12484132	3300006414	Marine	MATYKGIQGYTVQKLSSDPTVADTVGQLWYNSSAAK
Ga0099958_12747681	3300006567	Marine	MSTYKGIQGYSVQTLASDPSPAQSVEGQLWYNSTTKTYKIATHDHLFIM*
Ga0098070_1069391	3300006726	Marine	MATYKGIQGYTVQKLSDDPTAGETIDGQLWYNSSTGKFKIGTTAAGAWA
Ga0098033_10441301	3300006736	Marine	MATYKGIQGYTVQKLSSDPTASEAEGQLFYNSTSGTFKIGTSAAGTW
Ga0098039_10786042	3300006753	Marine	MATYKGIQGYTVQKLSSDPTASEAVGQLWYNSTTGKFK
Ga0098039_11848982	3300006753	Marine	MATYKGIQGYSVQKLTTDPTAAEAVGQLWYNSGSG
Ga0098039_11923352	3300006753	Marine	MATYKGIQGYTVQSLASDPTPTADYVGQMWYNSGSN
Ga0098039_12524372	3300006753	Marine	MATYKGIQGYTVQKLSSDPTAEDTVGQLFYDSTSGKFKISVAGAGAWASG
Ga0098044_12796431	3300006754	Marine	MATYKGIQGYTVQKLSSDPTASEVEGQLWYNSSTGAFKLGVAGAGAWASG
Ga0098071_1236271	3300006768	Marine	MATYKGIQGYTVQKLSDDPGTLGDVVGQLWYNSTTAAFKVAVEAGAAWSAGGA
Ga0098054_12784761	3300006789	Marine	MATYKGIQGYTVQKRSDDPTVREAIGPVWYTSTAGSFTIATQGAGA
Ga0098060_10627032	3300006921	Marine	MATYKGIQGYTVENLSSDPPAEQSVGQVWYNSTTWKFKVGT
Ga0098057_10881962	3300006926	Marine	MATYKGIQGYSVQKLSSDPGTLSDVVGQLWYNSTDGKFKIAAQGAGSFS
Ga0098057_11251722	3300006926	Marine	MATYKGIQGYSVQKLSEDPTAADVEGQLFYNSGSGKFK
Ga0098041_10951062	3300006928	Marine	MATYKGIQGYTVENLSSDPPAEQSVGQVWYNSTTWKFKVG
Ga0098062_10337372	3300008051	Marine	MATYKGIQGFTWQKVSSDPSDAVAGQVWYNSSTGKFKI
Ga0115362_1000878501	3300008416	Sediment	MATYKGIQGYTVQKLSEDPTASEAEGQLWYNSGSGKFKISVAGAGAW
Ga0115652_10952791	3300008624	Marine	MATYKGIQGYTVQKLSSDPTVSEAVGQLWYNSSTGQFKIGTESAGTWASAN
Ga0118716_11149131	3300009370	Marine	MATYKGIQGYTVQKLSSDPTASEAVGQLWYNSGIGKFKIGTEGAGT
Ga0114993_112825631	3300009409	Marine	MATYKGIQGYTVQKLASDPTAADVEGQLWYNSSLGKFKISAGGAGTWSSG
Ga0114909_11723521	3300009414	Deep Ocean	MATYKGIQGYTVKSLSSDPTDSEAVGQLWYNNSTGKFKISTEGT
Ga0114900_11002672	3300009602	Deep Ocean	MATYKGIQGYSVKKLSSDPTASEASGQLWYNSGTGKFKVGTE
Ga0105228_1280421	3300009613	Marine Oceanic	MATYKGIQGYSVQKLSSDPGTLSDVVGQLWYNSTDGKFKIAAQGAGSFSTGGDLN
Ga0105173_10556472	3300009622	Marine Oceanic	MATYKGIQGYSVQTLASDPGTLSEVEGQLWYNSTSGTYKIAVGAAG
Ga0105173_10799482	3300009622	Marine Oceanic	MATYKGIQGYTVQKLATDPTASETAGQLWYNSTSGKFKIATE
Ga0114999_101094281	3300009786	Marine	MATYKGIQGYSVPKLTTDPTGSDVVGQLWYNSTDAAFKISVA
Ga0105235_1315581	3300009791	Marine Oceanic	MATYKGIQGYTVQKLSEDLTAGSDTAGQLFYNSGTGKFRLSTAGAGAWSS
Ga0098049_11696491	3300010149	Marine	MATYKGIQGFTWQKVSSDPSDAVAGQVWYNSSTGKFKIATQAAAG
Ga0098061_13010722	3300010151	Marine	MATYKGIQGYTVQKLSSDPPAAQSVGQLWYNSGTGAFKIGTEG
Ga0098059_11549011	3300010153	Marine	MATYKGIQGYTVENLSSDPPAEQSVGQVWYNSTAYK
Ga0098047_103535102	3300010155	Marine	MATYKGIKGYSVKKLSSDPTASEAAGQLWYNSGTGKFKLGTAGAGAWASGGTI
Ga0136651_106248081	3300010330	Marine Hydrothermal Vent	MATYKGIQGYSVQKLSSDPSPTASVEGQLWYNSDTGKFKIAVSGAGAWESGGSLN
Ga0164320_104607521	3300013098	Marine Sediment	MATYKGIQGYTVQSLASDPSPVVTGQLWYNSGSNV
Ga0164313_112406262	3300013101	Marine Sediment	MATYKGIQGYSVQKLSSDPTASEAVGQLWYNSVGGKFKIGTSGT
Ga0211670_105108641	3300020434	Marine	MATYKGIQGYTVQKFSSDPTASEVAGQLFYNSATGKFKI
Ga0226832_101750171	3300021791	Hydrothermal Vent Fluids	MGTYKGIKGYTVQKLASDPTASATIGQLFYNSGDNDFKFSQ
(restricted) Ga0255047_106036782	3300024520	Seawater	MATYKGIQGYSVQKLADDPTAADAVGQLWYNSTAGKFKISVEGAGAWASGGV
Ga0207907_1085201	3300025043	Marine	MATYKGIQGYSVQKLSSDPTVEDTVGQLWYNSSTGKFKIAVAGAG
Ga0207901_10120671	3300025045	Marine	MATYKGIQGYSVQKLSSDPTASEAVGQLWYNSGTGKFKIGT
Ga0207902_10198921	3300025046	Marine	MGTYKGIQGYSVQKLASDPTVIDTVGQVFYNSGDNDFKFSQ
Ga0207902_10485502	3300025046	Marine	MATYKGIQGYSVQSLASDPPAAQSVGQLWYNSASNVW
Ga0207898_10454131	3300025049	Marine	MATYKGIQGHTVQSLASDPTASEAVGQLWYNSASNVWKISAEG
Ga0207892_10256651	3300025050	Marine	MTAYKGIQGYSVQNLSSDPTASEAVGQLWYNSTEGKFKIAVA
Ga0207906_10175791	3300025052	Marine	MGTYKGIQGYSVQTLASDPSPTASVEGQLWFNSTSSTYKIATAAAGAWSSGGAL
Ga0207887_10310351	3300025069	Marine	MATYKGIQGYSVQKLSSDPTVADTIGQLWYNSTSGKFKIS
Ga0207887_10324501	3300025069	Marine	MATYKGIQGYSVQKLSSDPTATDAVGQLWYNSTSGKFKIGDAG
Ga0208792_10930131	3300025085	Marine	MATYKGIQGYSVQSLSSDPPAEQSPGQLWYNSTTWKFKVGTQGA
Ga0209349_11628941	3300025112	Marine	MATYKGIQGYTVQKLSEDPTAADVEGQLFYNSGSGKFKIGAT
Ga0209644_10468942	3300025125	Marine	MAAYKGIQGYSVQKLSSDPTASEAEGQLWYNSSTAKFKIAVAGA
Ga0209644_10482051	3300025125	Marine	MATYKGIQGYSVQKLATDPTASEAAGQLWYNSGTGK
Ga0209644_11634951	3300025125	Marine	MATYKGIQGYSVQSLASDPTAENTIGQLFYNSTSGKFKYSTEAGG
Ga0209128_10906201	3300025131	Marine	MATYKGIQGYTVQNLSSDPTASEAEGQLWYNSTAGKF
Ga0209128_10924142	3300025131	Marine	MATYKGIQGYTVQKLSDDPTASEAAGQLWYNSSTGQFKVGTSAAGAW
Ga0208299_11093991	3300025133	Marine	MATYKGIQGYTVQKLATDPTASEAVGQLWYNSTLGKFKI
Ga0208299_11204671	3300025133	Marine	MSTYKGIQGYSVQDLESDPTLADVVGQLWYNSISRAFKVSVQGA
Ga0207893_10590021	3300025241	Deep Ocean	MGTYKGIQGYMVESLASDPGTLSEVVGKLWYNSGSNVWK
Ga0207880_10507401	3300025247	Deep Ocean	MATYKGIQGYTVQSLASDPTASEAVGQLWYNSASNVWKISA
Ga0207904_10544781	3300025248	Deep Ocean	MATYKGIRGFTVQSLASDPTASSDSAGQLWYNSTSGKLKVSI
Ga0207895_10713591	3300025260	Deep Ocean	MATYKGIQGYTVQTLASDPSPAASVEGQLWYNSTSGTYKIAVA
Ga0208029_10985941	3300025264	Deep Ocean	MADYKGIQGYSVQKLSSDPTAADVEGQLWYNSGTGKFKIAVAGAG
Ga0208029_11038772	3300025264	Deep Ocean	MATYKGIQGYSVQKLSDDPTASEVAGQLWYNSTSGKFK
Ga0209757_100600202	3300025873	Marine	MGTYKGIQGYRVESLASDPGTISEVIGKVWYNSGSNVW
Ga0209757_101560581	3300025873	Marine	MGTYKGIQGYSVQKLSSDPSPTANYVGQLWYNSGTGKFKIAVEGTGAWASGG
Ga0209757_102250561	3300025873	Marine	MATYKGIQGYSVQSLSSDPGTLSEVVGQLWYNSTLGKFKISIAGAGAWA
Ga0209757_102432282	3300025873	Marine	MGTYKGIQGYTVQKLSSDPTVADTVGQLWYNSTTGKFKISTQAAG
Ga0209757_102557621	3300025873	Marine	MADYKAIQGYTVEKLSSDPSPVVTGKLFYNDTSNVFK
Ga0208451_10386481	3300026103	Marine Oceanic	MATYKGIQGYTVQSLSTDPTASSGTEGQLWYNSSAGKFKNAVAAAGSWSS
(restricted) Ga0255052_105273192	3300027865	Seawater	MATYKGIQGYSVQTLASDPTASEAAGQLWYNSTSGAFKI
Ga0257108_10749342	3300028190	Marine	MATYKGIQGYSVQKLSSDPGTLADVEGQLWYNSTSGAF
Ga0257111_11148021	3300028535	Marine	MATYKGIQGYSVQKLSSDPTASEAAGQLWYNSTSG
Ga0310123_107164461	3300031802	Marine	MATYKGIQGYSVQKLATDPTVADTVGQLWYNSTSGKFKIS
Ga0310124_101172391	3300031804	Marine	MATYKGIQGYSVQKLSSDPTASETAGQLWYNSTSGKFKISTEGAGAWAT
Ga0310125_104171291	3300031811	Marine	MATYKGIQGYSVQKLSSDPTASEAAGQLWYNSGAAKF
Ga0310342_1009129501	3300032820	Seawater	MATYKGIQGYSVQKLSSDPTASEAVGQLWYNSTAGKIKI
Ga0310342_1031227752	3300032820	Seawater	MATYKGIQGYSVQKLSSDPTASEVEGQLWYNSTTGKFK
Ga0314858_151394_442_594	3300033742	Sea-Ice Brine	MATYKGIQGYSVQKLSSDPAASEADGQLWYNTAGKFKVGTSAAGSWASGGA
Ga0326756_015830_761_871	3300034629	Filtered Seawater	MATYKGIQGYSVQKLSSDPTASEASGQLWYNSDAGKF
Ga0326756_019715_2_112	3300034629	Filtered Seawater	MATYKGIQGYSVQTLASDPGTLSVVEGQLWYNSTSGT
Ga0326756_022676_623_739	3300034629	Filtered Seawater	MATYKGIQGYSVQNLSSDPGTLGDVIGQLWYNSGSGKFK
Ga0326756_046354_425_535	3300034629	Filtered Seawater	MGTYKGIQGYMVESLASDPGTISEVVGKLWYNSGSNV
Ga0326741_039429_3_107	3300034654	Filtered Seawater	MATYKGIQGYSVQKLSSDPTASEAEGQLWYNSSTP
Ga0326741_076146_422_553	3300034654	Filtered Seawater	MATYKGIQGYMVQSLASDPTASSDNEGQLWYNSASNVWKISAAI
Ga0372840_161992_547_666	3300034695	Seawater	MATYKGIQGYSVQKLATDPTVEDTVGQLWYNSSSGKFKIS
Ga0372840_257370_3_155	3300034695	Seawater	MATYKGIQGYSVQNLSADPTASEAAGQLWYNSTSGKFKVGTSGAGAWATGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters