NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F068850

Metagenome / Metatranscriptome Family F068850

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F068850
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 90 residues
Representative Sequence MQSIQCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESEPVERDMFQRELELQRQGYSID
Number of Associated Samples 71
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.81 %
% of genes near scaffold ends (potentially truncated) 20.97 %
% of genes from short scaffolds (< 2000 bps) 77.42 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.194 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment
(16.129 % of family members)
Environment Ontology (ENVO) Unclassified
(33.871 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(29.032 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 30.25%    β-sheet: 0.00%    Coil/Unstructured: 69.75%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF01618MotA_ExbB 22.58
PF02472ExbD 5.65
PF14559TPR_19 4.84
PF08238Sel1 0.81
PF01594AI-2E_transport 0.81
PF04456DUF503 0.81
PF13432TPR_16 0.81
PF13174TPR_6 0.81
PF00543P-II 0.81
PF13525YfiO 0.81
PF01084Ribosomal_S18 0.81
PF04339FemAB_like 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0848Biopolymer transport protein ExbDIntracellular trafficking, secretion, and vesicular transport [U] 5.65
COG0238Ribosomal protein S18Translation, ribosomal structure and biogenesis [J] 0.81
COG0347Nitrogen regulatory protein PIISignal transduction mechanisms [T] 0.81
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.81
COG1550Stress-induced protein YlxP, DUF503 familyFunction unknown [S] 0.81
COG3146Predicted N-acyltransferaseGeneral function prediction only [R] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000242|TDF_OR_ARG05_123mDRAFT_1005165All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio sulfidiphilus3604Open in IMG/M
3300000242|TDF_OR_ARG05_123mDRAFT_1059680All Organisms → cellular organisms → Bacteria → Proteobacteria753Open in IMG/M
3300000242|TDF_OR_ARG05_123mDRAFT_1114409All Organisms → cellular organisms → Bacteria → Proteobacteria512Open in IMG/M
3300003885|Ga0063294_10237515All Organisms → cellular organisms → Bacteria → Proteobacteria1142Open in IMG/M
3300003885|Ga0063294_10268148All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1062Open in IMG/M
3300003988|Ga0055475_10011060All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2327Open in IMG/M
3300003988|Ga0055475_10230188All Organisms → cellular organisms → Bacteria → Proteobacteria588Open in IMG/M
3300004007|Ga0055476_10157115All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria774Open in IMG/M
3300004026|Ga0055443_10076867All Organisms → cellular organisms → Bacteria → Proteobacteria909Open in IMG/M
3300004028|Ga0055447_10281672All Organisms → cellular organisms → Bacteria → Proteobacteria559Open in IMG/M
3300004030|Ga0055444_10000194All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria9135Open in IMG/M
3300004055|Ga0055480_10075284All Organisms → cellular organisms → Bacteria → Proteobacteria1331Open in IMG/M
3300004056|Ga0055478_10123861All Organisms → cellular organisms → Bacteria → Proteobacteria745Open in IMG/M
3300004056|Ga0055478_10301579All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas → Desulfuromonas sp. TF503Open in IMG/M
3300004064|Ga0055479_10069553All Organisms → cellular organisms → Bacteria → Proteobacteria1230Open in IMG/M
3300004073|Ga0055516_10076155All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria734Open in IMG/M
3300004073|Ga0055516_10141811All Organisms → cellular organisms → Bacteria → Proteobacteria581Open in IMG/M
3300004097|Ga0055584_101617245All Organisms → cellular organisms → Bacteria → Proteobacteria670Open in IMG/M
3300004113|Ga0065183_10097591All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1112Open in IMG/M
3300004113|Ga0065183_10347309All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria693Open in IMG/M
3300005588|Ga0070728_10499194All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria637Open in IMG/M
3300005589|Ga0070729_10501854All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria664Open in IMG/M
3300005590|Ga0070727_10063447All Organisms → cellular organisms → Bacteria → Proteobacteria2182Open in IMG/M
3300005600|Ga0070726_10354353All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria740Open in IMG/M
3300005600|Ga0070726_10659490All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium528Open in IMG/M
3300005601|Ga0070722_10011626All Organisms → cellular organisms → Bacteria → Proteobacteria2642Open in IMG/M
3300005601|Ga0070722_10166342All Organisms → cellular organisms → Bacteria → Proteobacteria892Open in IMG/M
3300005601|Ga0070722_10395380All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria607Open in IMG/M
3300005612|Ga0070723_10382382All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria679Open in IMG/M
3300006467|Ga0099972_11487063All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria559Open in IMG/M
3300006467|Ga0099972_11937763All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria980Open in IMG/M
3300006467|Ga0099972_12151666All Organisms → cellular organisms → Bacteria → Proteobacteria808Open in IMG/M
3300006467|Ga0099972_12888474All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1563Open in IMG/M
3300007102|Ga0102541_1130438All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1361Open in IMG/M
3300007102|Ga0102541_1133505All Organisms → cellular organisms → Bacteria → Proteobacteria569Open in IMG/M
3300007784|Ga0102955_1161567All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium618Open in IMG/M
3300009033|Ga0102956_1145416All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium773Open in IMG/M
3300009506|Ga0118657_10007826All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria19212Open in IMG/M
3300009506|Ga0118657_11751588All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium725Open in IMG/M
3300009509|Ga0123573_10033416All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria8128Open in IMG/M
3300010392|Ga0118731_102276794All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1751Open in IMG/M
3300010392|Ga0118731_102802104All Organisms → cellular organisms → Bacteria → Proteobacteria2159Open in IMG/M
3300010392|Ga0118731_107224898All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2337Open in IMG/M
3300010392|Ga0118731_108680157All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1012Open in IMG/M
3300010392|Ga0118731_108815542All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium973Open in IMG/M
3300010392|Ga0118731_109124457All Organisms → cellular organisms → Bacteria → Proteobacteria1638Open in IMG/M
3300010392|Ga0118731_111634779All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium524Open in IMG/M
3300010392|Ga0118731_111760349All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium567Open in IMG/M
3300010392|Ga0118731_113342203All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium595Open in IMG/M
3300010413|Ga0136851_10931373All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium847Open in IMG/M
3300010413|Ga0136851_11232901All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium723Open in IMG/M
3300010430|Ga0118733_100121407All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5242Open in IMG/M
3300010430|Ga0118733_100482278All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2461Open in IMG/M
3300010430|Ga0118733_100603723All Organisms → cellular organisms → Bacteria → Proteobacteria2184Open in IMG/M
3300010430|Ga0118733_105536196All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium665Open in IMG/M
3300010430|Ga0118733_106184827All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium626Open in IMG/M
3300010430|Ga0118733_106973552All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium588Open in IMG/M
3300010430|Ga0118733_107414804All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium569Open in IMG/M
3300010430|Ga0118733_108073271All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium544Open in IMG/M
3300013099|Ga0164315_10770319All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium770Open in IMG/M
3300013101|Ga0164313_10004673All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria12148Open in IMG/M
3300013101|Ga0164313_10021019All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5566Open in IMG/M
3300013101|Ga0164313_10128113All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2143Open in IMG/M
3300013101|Ga0164313_11617125All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium521Open in IMG/M
3300019719|Ga0193977_1065342All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium506Open in IMG/M
3300021331|Ga0210347_1193822Not Available878Open in IMG/M
3300022201|Ga0224503_10047525All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1295Open in IMG/M
3300022201|Ga0224503_10057220All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1186Open in IMG/M
3300022206|Ga0224499_10005032All Organisms → cellular organisms → Bacteria → Proteobacteria3629Open in IMG/M
3300022209|Ga0224497_10046375All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1888Open in IMG/M
3300022217|Ga0224514_10000040All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria50818Open in IMG/M
3300022217|Ga0224514_10319221All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium569Open in IMG/M
3300022220|Ga0224513_10377965All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium570Open in IMG/M
3300022226|Ga0224512_10589237All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium539Open in IMG/M
(restricted) 3300022938|Ga0233409_10067405All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1080Open in IMG/M
(restricted) 3300024338|Ga0255043_10198814All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium686Open in IMG/M
(restricted) 3300024519|Ga0255046_10393954All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium657Open in IMG/M
(restricted) 3300024528|Ga0255045_10281843All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium665Open in IMG/M
(restricted) 3300024529|Ga0255044_10379911All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium588Open in IMG/M
3300025599|Ga0210074_1009831All Organisms → cellular organisms → Bacteria → Proteobacteria2915Open in IMG/M
3300025797|Ga0210062_1038979All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1154Open in IMG/M
3300025813|Ga0210064_1063591All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium922Open in IMG/M
3300025823|Ga0210123_1001651All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium11120Open in IMG/M
3300025883|Ga0209456_10076492All Organisms → cellular organisms → Bacteria → Proteobacteria1490Open in IMG/M
3300027820|Ga0209578_10110233All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1357Open in IMG/M
3300027822|Ga0209633_10001263All Organisms → cellular organisms → Bacteria26642Open in IMG/M
3300027828|Ga0209692_10251093All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium794Open in IMG/M
3300027858|Ga0209013_10011766All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales7069Open in IMG/M
3300027858|Ga0209013_10016339All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales5828Open in IMG/M
3300027858|Ga0209013_10147505All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1480Open in IMG/M
3300027858|Ga0209013_10499502All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria655Open in IMG/M
(restricted) 3300027861|Ga0233415_10046862All Organisms → cellular organisms → Bacteria → Proteobacteria1798Open in IMG/M
(restricted) 3300027861|Ga0233415_10342478All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium710Open in IMG/M
3300027917|Ga0209536_100514799All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1493Open in IMG/M
3300027978|Ga0209165_10036112All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1759Open in IMG/M
(restricted) 3300027996|Ga0233413_10030494All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2035Open in IMG/M
(restricted) 3300028045|Ga0233414_10042976All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1843Open in IMG/M
(restricted) 3300028045|Ga0233414_10424019All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium621Open in IMG/M
3300028598|Ga0265306_10031036All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2603Open in IMG/M
3300028598|Ga0265306_10275646All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium902Open in IMG/M
3300028598|Ga0265306_10480810All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium680Open in IMG/M
3300028599|Ga0265309_10323267All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium996Open in IMG/M
3300028599|Ga0265309_10948102All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium593Open in IMG/M
3300028600|Ga0265303_10291619All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1273Open in IMG/M
3300028600|Ga0265303_10319511All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1218Open in IMG/M
3300032136|Ga0316201_10827473All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium783Open in IMG/M
3300032231|Ga0316187_10007045All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae9643Open in IMG/M
3300032231|Ga0316187_10047352All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales3444Open in IMG/M
3300032251|Ga0316198_10200938All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1153Open in IMG/M
3300032251|Ga0316198_10388571All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium779Open in IMG/M
3300032252|Ga0316196_10100596All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales1342Open in IMG/M
3300032252|Ga0316196_10188426All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium924Open in IMG/M
3300032252|Ga0316196_10211762All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium861Open in IMG/M
3300032258|Ga0316191_10078898All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales2417Open in IMG/M
3300032258|Ga0316191_10712078All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria728Open in IMG/M
3300032258|Ga0316191_11348310All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium515Open in IMG/M
3300032259|Ga0316190_10793822All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium625Open in IMG/M
3300032259|Ga0316190_10979795All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium554Open in IMG/M
3300032260|Ga0316192_10177715All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1482Open in IMG/M
3300032262|Ga0316194_10145966All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1522Open in IMG/M
3300032272|Ga0316189_10630055All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium820Open in IMG/M
3300032272|Ga0316189_11244823All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium561Open in IMG/M
3300032273|Ga0316197_10343029All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium821Open in IMG/M
3300033429|Ga0316193_10124176All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales2030Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment16.13%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands12.90%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine10.48%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow8.87%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment6.45%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment6.45%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment5.65%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater4.84%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment4.03%
MarineEnvironmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine4.03%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.23%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.23%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine2.42%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment2.42%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment1.61%
Hydrothermal VentsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vents1.61%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.61%
Marine SedimentEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Marine Sediment1.61%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.81%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.81%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.81%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000242Marine microbial communities from chronically polluted sediments in Tierra del Fuego: Site OR sample ARG 05_12.3mEnvironmentalOpen in IMG/M
3300003885Black smoker hydrothermal vent sediment microbial communities from the Guaymas Basin, Mid-Atlantic Ridge, South Atlantic Ocean - Sample 1EnvironmentalOpen in IMG/M
3300003988Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2EnvironmentalOpen in IMG/M
3300004007Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2EnvironmentalOpen in IMG/M
3300004026Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2EnvironmentalOpen in IMG/M
3300004028Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordC_D2EnvironmentalOpen in IMG/M
3300004030Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2EnvironmentalOpen in IMG/M
3300004055Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2EnvironmentalOpen in IMG/M
3300004056Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D1EnvironmentalOpen in IMG/M
3300004064Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D1EnvironmentalOpen in IMG/M
3300004073Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004113Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (version 2)EnvironmentalOpen in IMG/M
3300005588Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1EnvironmentalOpen in IMG/M
3300005589Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2EnvironmentalOpen in IMG/M
3300005590Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2EnvironmentalOpen in IMG/M
3300005600Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1EnvironmentalOpen in IMG/M
3300005601Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1EnvironmentalOpen in IMG/M
3300005612Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2EnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300007102Combined Assembly of Marine Sediment Inoculum and EnrichmentsEngineeredOpen in IMG/M
3300007784Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D1_MGEnvironmentalOpen in IMG/M
3300009033Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MGEnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010413Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300013099Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay6, Core 4569-2, 0-3 cmEnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300019719Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_4-5_MGEnvironmentalOpen in IMG/M
3300021331Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.456 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022201Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21EnvironmentalOpen in IMG/M
3300022206Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_24EnvironmentalOpen in IMG/M
3300022209Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_13EnvironmentalOpen in IMG/M
3300022217Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_24EnvironmentalOpen in IMG/M
3300022220Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_21EnvironmentalOpen in IMG/M
3300022226Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13EnvironmentalOpen in IMG/M
3300022938 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MGEnvironmentalOpen in IMG/M
3300024338 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_9EnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300024528 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23EnvironmentalOpen in IMG/M
3300024529 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21EnvironmentalOpen in IMG/M
3300025599Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025797Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025813Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025823Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025883Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11 (SPAdes)EnvironmentalOpen in IMG/M
3300027820Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027822Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 1 (SPAdes)EnvironmentalOpen in IMG/M
3300027828Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027858Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027978Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 (SPAdes)EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300028598Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028599Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028600Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M
3300032231Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1EnvironmentalOpen in IMG/M
3300032251Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxicEnvironmentalOpen in IMG/M
3300032252Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cmEnvironmentalOpen in IMG/M
3300032258Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cmEnvironmentalOpen in IMG/M
3300032259Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2EnvironmentalOpen in IMG/M
3300032260Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrowEnvironmentalOpen in IMG/M
3300032262Coastal sediment microbial communities from Maine, United States - Cross River sediment 1EnvironmentalOpen in IMG/M
3300032272Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrowEnvironmentalOpen in IMG/M
3300032273Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A oxicEnvironmentalOpen in IMG/M
3300033429Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
TDF_OR_ARG05_123mDRAFT_100516523300000242MarineMRQLNRHIVAVFVTGALWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID*
TDF_OR_ARG05_123mDRAFT_105968013300000242MarineMQAKQCVQLLLVVATLWVLPTRGEQQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESGAVEGDVGEETEPLERDIFQRELELQRQGYSID*
TDF_OR_ARG05_123mDRAFT_111440923300000242MarineMQLQQFIRLLLVLTSLWAVPASGEEPMEQDTISIKGNQGLPKTMYIAPWKRVGAPLESDALEGDIREETEPLERDMFQHELELQRQGYSID*
Ga0063294_1023751523300003885Hydrothermal VentsVNGRSVHNMPFKQRMRLLCVVFGLSVFTAGAQEQLEQETISIKGNRGLPKTLYIAPWKRVGAPLESGRLEGEVGEDTKPVEREMFQHELELQRQGYSLD*
Ga0063294_1026814813300003885Hydrothermal VentsMSLKQCMRLLLVVPGLWVLTATAQEQLEQETISIKGNRGLPKTLYIAPWKRVGAPLESDRLQGEVGEETKPVERDMFQHELELQRRGYSLD*
Ga0055475_1001106023300003988Natural And Restored WetlandsMQAKRCTCPLLVAALLWALNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLDSDELEGDIREDTEPVERDIFQHELELQRQGYSVD*
Ga0055475_1023018813300003988Natural And Restored WetlandsMQAKRCTCLLLVVTLLWVPNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDEPEGDIREETEPLERDIFQHELELQR
Ga0055476_1015711523300004007Natural And Restored WetlandsMQAKRCTCLLLVVTLLWVPNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDEPEGDIREETEPLERDIFQHELELQRQGYSVD*
Ga0055443_1007686723300004026Natural And Restored WetlandsMQAKKCTCPLLLATLLWALNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGNPLDSGELEGDIREETEPVERDIFQHELELQRQGYSVD*
Ga0055447_1028167223300004028Natural And Restored WetlandsMQAKKCTCPLLLATLLWVLNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGTPLDSGALEGDIREETEPVERDIFQHELELQRQGYSVD*
Ga0055444_1000019483300004030Natural And Restored WetlandsMQPNQYIRLLLASVILWMSGASAQEQLEQDTILIKGNQGLPSTLYIAPWKQVGTPLESDPLEGDIGEETQPVERDLFQRELELLQQGYSVE*
Ga0055480_1007528423300004055Natural And Restored WetlandsMQAKRCTCPLFVAALLWALNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGTPLDSDELEGDIREDTEPVERDIFQHELELQRQGYSVD*
Ga0055478_1012386113300004056Natural And Restored WetlandsMMHGEKTEMQQLKKCMTGIIAIAALWLSSAIAEQQLEQETISIKGNQALPKTLYIAPWKRVGAPLEGGRIDAEITEESKPLERDMFQRQLELQRKGYSID*
Ga0055478_1030157913300004056Natural And Restored WetlandsLCLLLITSILWLLPAGAQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDRLDAEIKEETEPVERDIFQRELELQRQGYSVE*
Ga0055479_1006955323300004064Natural And Restored WetlandsMLVVSTLWLLPASAQEPLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGPEAEIGEENEPVERDIFQRELELQRQGYSVE*
Ga0055516_1007615513300004073Natural And Restored WetlandsMQPQQCLRLLLVVVALWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLASGQLEGDVGKETEPVERDMFQRELELQRQGYSVE*
Ga0055516_1014181113300004073Natural And Restored WetlandsQAKKCTCPLLLATLLWVLNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGTPLDSGALEGDIREETEPVERDIFQHELELQRQGYSVD*
Ga0055584_10161724523300004097Pelagic MarineMQPKQTIRLLLFVTILWIPSVNGEEQLQQETISIKGNQGLPKTLYIAPWKRVGGPLESEGLEGDVGEETQPLERDLFQHELEL
Ga0065183_1009759123300004113Pelagic MarineMQPKQCIRLLLVVITLWVLSASGEEQLEQETILIKGNQGLPKTLYIAPWKRVGAPLESDELDGDVGETTEPVERDLFQHELELQRQGYSTD*
Ga0065183_1034730923300004113Pelagic MarineMQPEPYIRLLLVAVTLWVLPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESRPVERDMFQRELELQRQGYSID*
Ga0070728_1049919413300005588Marine SedimentIAMERQNMQSIPCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLKSDGLEGDVGEESEPVERDMFQRELELQRQGYSLD*
Ga0070729_1050185413300005589Marine SedimentKQCLCVLFVIVKLSILPASAEQSLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELEGEVGQEMQPVERDIFQRKLELQRQGYSVDQVD*
Ga0070727_1006344723300005590Marine SedimentMQSIPCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLKSDGLEGDVGEESEPVERDMFQRELELQRQGYSID*
Ga0070726_1035435323300005600Marine SedimentMQSIPCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLQSGELDGDVGTETEPVERDMFQRELELQRQGYSID*
Ga0070726_1065949023300005600Marine SedimentMQLKQCLCVLFVIVKLSILPASAEQPLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELEGEVGQEMQPVERDIFQRKLELQRQGYSVDQVD*
Ga0070722_1001162623300005601Marine SedimentMQPELTIRLLLVALTLWVLPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESRPVERDMFQRELELQRQGYSVD*
Ga0070722_1016634223300005601Marine SedimentMQSIPCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLKGDGLEGDVGEESEPVERDMFQRELELQRQGYSID*
Ga0070722_1039538023300005601Marine SedimentMQPKQCIRLLLVVVTLWVLPAGGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDALEGELGEETEPLERDMFQHELELQRQGYSID*
Ga0070723_1038238233300005612Marine SedimentTLWVLPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESRPVERDMFQRELELQRQGYSVD*
Ga0099972_1148706323300006467MarineMQPKQCIRLLLVVVTLWVLPAGGEQQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELDGEVGETTEPVERDLFRHELELQRQGYSID*
Ga0099972_1193776323300006467MarineMRQLNRHMVAVFVTGALWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID*
Ga0099972_1215166623300006467MarineMHTEHYLRLLLVIIILWVSPVSGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLQSGELDGDVGTETEPVERDMFQRELELQRQGYSID*
Ga0099972_1288847433300006467MarineMQLKQCLCVLFVIVKLSILPASAEQSLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELEGEVGQEMQPVERDIFQRKLELQRQGYSVDQVD*
Ga0102541_113043823300007102Marine SedimentMRQLNRYIVAVFVSGALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGRIDGEIREQSKPVERDMFQRQLQLQREGYSID*
Ga0102541_113350513300007102Marine SedimentMQIEHSLCRLLVVITLWVSPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLQSDELEGDIGTETEPVERDMFQHELELQRQGYSID*
Ga0102955_116156713300007784SoilMRQLNRYIVAVFVSGALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID*
Ga0102956_114541623300009033SoilAVFVSGALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGRIDGEIREQSKPVERDMFQRQLQLQREGYSID*
Ga0118657_10007826183300009506Mangrove SedimentMQAKRYSYPLLVAALLWALNASGQEQLISIKGNQGLPKTLYIAPWKRVGAPLESDELEGDIREETQPVERDIFQHELELQRQGYSVDRP*
Ga0118657_1175158813300009506Mangrove SedimentMQAKRCIFPLLVATLLWVPNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELEGDIREETEPVERDIFQHELELQRQGYSVD*
Ga0123573_1003341663300009509Mangrove SedimentMEHQVMQAKYYVRALLAVALLWVMHATAEEQLEQETISIKGSQGLPKTLYIAPWKRVGAPLDSDELEGDIREETQPVERDIFQRELELQRQGYSVDQ*
Ga0118731_10227679423300010392MarineMQSTQYVRLLLVVVALWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDIGEESEPVERDMFQRELELQRQGYSLD*
Ga0118731_10280210433300010392MarineMRGLNTQAVAVFVTAALCLTGVAAQEQLEQDTISIKGNQALPKTLYIAPWKRVGAPLEGNQIDGDIREESKPVERDMFQRRLELQREGYSID*
Ga0118731_10722489813300010392MarineLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLKGDGLEGDVGEESEPVERDMFQRELELQRQGYSID*
Ga0118731_10868015723300010392MarineMQPKQIIRLLLIVTTLWVLPVSGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESEGLEGEVGEETEPVERDMFQRELELQRQGYSID*
Ga0118731_10881554223300010392MarinePIVTGRQNMQSKQCIRLLLVVVTLWVSNTSAQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDGIEGDVGEETEPVERDIFQRELELQRQGYSVD*
Ga0118731_10912445723300010392MarineMEYQHMQPKQCIRLLLVVVTLWVLPAGGEQQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELDGEVGETTEPVERDLFRHELELQRQGYSID*
Ga0118731_11163477923300010392MarineVAGSGRREYQPGRWQDCVRLLLVVVCLWVAPAGAEEQLEQETILIKGNQGLPRTLYIAPWKRVGAPLDSDTLEGEIGEEQEPLERDLFQRELEL
Ga0118731_11176034913300010392MarineMANSGLTEYLIMQPEPYIRLLLVAVTLWVLPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESRPVERDMFQRELELQRQGYS
Ga0118731_11334220313300010392MarineMQPKQCIRLLLVVITLWVLSASGEEQLEQETISIKGNQGLPKTLYIAPWKRLGAPLESDELDGDVGETTAPVERDLFQHELELQRQGYSTD*
Ga0136851_1093137323300010413Mangrove SedimentMQAKRYSYPLLVAALLWALNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELEGDIREETQPVERDIFQHELELQRQGYSVDRP*
Ga0136851_1123290123300010413Mangrove SedimentMEHQVMQAKYYVRALLAVALLWVMHATAEEQLEQETISIKGSQGLPKTLYIAPWKRVGAPLDSDELEGDIREETQPVERDIFQR
Ga0118733_10012140753300010430Marine SedimentMERQNMQSIPCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLKGDGLEGDVGEESEPVERDMFQRELELQRQGYSID*
Ga0118733_10048227843300010430Marine SedimentMVAVFVTGALWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID*
Ga0118733_10060372323300010430Marine SedimentMEYQHMQPKQCIRLLLVVVTLWVLPAGGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELDGEVGETTEPVERDLFRHELELQRQGYSID*
Ga0118733_10553619623300010430Marine SedimentMQPKQCIRLLLVIVTLWVLSASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELDGEVGETTEPVERDLFQHELELQRQGYSTD*
Ga0118733_10618482723300010430Marine SedimentMQTKRYLCRLLVAITLWVSPVSGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELEGDVGTETEPVERDMFQRE
Ga0118733_10697355213300010430Marine SedimentMRRTKQHLCVLLVAAGMWVTTTAADEQLEQQTISIKGNQALPKTLYIAPWKRVGAPLESGEIDGEISEESRPVERDMFQRQLELRREGYSVD*
Ga0118733_10741480413300010430Marine SedimentMANSGLTEYLIMQPEPYIRLLLVAVTLWVSPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESRPVERDMFQRELELQRQGYS
Ga0118733_10807327113300010430Marine SedimentMLLAVAGLWISGAAAEEQLEQDTISIKGNQALPKTLYIAPWKRVGAPLESDAIDAEINEASRPVERDMFQHQLELQRQGYSID*
Ga0164315_1077031933300013099Marine SedimentMKLINKRVYILLAVVGLWASSTVAEEQLEQETISIKGNQALPKTLYIAPWKRVGAPLEGGRIDGQITEESKPVERDMFQHQLELQRQGYSID*
Ga0164313_1000467393300013101Marine SedimentMQTRQSVQLLLVVAILWVLPTSGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLQSDVIEGDVGEETEPLERDIFQRELELQRQGYSID*
Ga0164313_1002101923300013101Marine SedimentMMPINKRVCILLAVTSLWVSGAVAEEQLEQETISIKGNQALPKTLYIAPWKRVGEPLQGGQIDGEITEESKPVERDMFQHQLELQRQGYSID*
Ga0164313_1012811333300013101Marine SedimentMKLINKRVYVLLAVVGLWASSTVAEEQLEQETISIKGNQALPKTLYIAPWKRVGAPLEGGRIDGQITEESKPVERDMFQHQLELQRQGYSID*
Ga0164313_1161712513300013101Marine SedimentMEYWIMQSELTIRLLLVVLTLWVLPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESRPVERDMFQRELELQRQGYSVD*
Ga0193977_106534223300019719SedimentMRQLNRHMVAVFVTGVLWLTAAVAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID
Ga0210347_119382223300021331EstuarineWVLNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLDSGELEGDIREEAEPLERDIFQYELELQRQGYSID
Ga0224503_1004752513300022201SedimentMRQLNRYIVAVFVSGALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGRIDGEIREQSKPVERDMFQRQLQLQREGYSID
Ga0224503_1005722013300022201SedimentMLTKQCIRLLLVASALWTASTGAEEQLEQETISIKGNRGLPKTLYIAPWKKVGSPLESDELQGDVGNDTEPVERDIFQRELDLQRQGYSLD
Ga0224499_1000503223300022206SedimentMRQLNRYIVAVFVSGALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSKPVERDMFQRQLQLQREGYSID
Ga0224497_1004637533300022209SedimentMHAKHSARLLLVAITLWVLNAGGQEQLEQDTISIKGNQGLPATLYIAPWKRVGAPLESDKLEGDIGNETEPVERDIFQRELELQRQGYSID
Ga0224514_10000040183300022217SedimentMQEKQYIRLLLVAVPLWGFSASGQEQQLEQETISIKGNQGLPKTMYIAPWKRVGAPLESDELEGDIGKETEPVERDIFQHELELQRQGYSID
Ga0224514_1031922123300022217SedimentMQPGPPYIRLLLVAVTLWISPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESRPVERDMFQRELELQRQGYSVD
Ga0224513_1037796523300022220SedimentMQIEHSLCRLLVVITLWVSPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLQSDELEGDIGTETEPVERDMFQHELELQRQGYSID
Ga0224512_1058923723300022226SedimentMQAKFCACLLLVVVTLWMLSAGGQEQLEQETITIKGNQGLPSTLYIAPWKRVGAPLESNELEGDIGSETRPVEREIFQRELELQRKGYSLD
(restricted) Ga0233409_1006740513300022938SeawaterMQSIQCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESEPVERDMFQRELELQRQGYSID
(restricted) Ga0255043_1019881423300024338SeawaterMQSIPCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLKGDGLEGDVGEESEPVERDMFQRELELQRQGYSID
(restricted) Ga0255046_1039395423300024519SeawaterMQPELTIRLLLVVLTLWVLPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLKGDGLEGDVGEESEPVERDMFQRELELQRQGYSLD
(restricted) Ga0255045_1028184313300024528SeawaterVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESEPVERDMFQRELELQRQGYSID
(restricted) Ga0255044_1037991113300024529SeawaterALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSKPVERDMFQRQLQLQREGYSID
Ga0210074_100983133300025599Natural And Restored WetlandsMQPNQYIRLLLASVILWMSGASAQEQLEQDTILIKGNQGLPSTLYIAPWKQVGTPLESDPLEGDIGEETQPVERDLFQRELELLQQGYSVE
Ga0210062_103897923300025797Natural And Restored WetlandsMQAKRCTCPLLVAALLWALNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLDSDELEGDIREDTEPVERDIFQHELELQRQGYSVD
Ga0210064_106359123300025813Natural And Restored WetlandsMQAKRCTCLLLVVTLLWVPNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDEPEGDIREETEPLERDIFQHELELQRQGYSVD
Ga0210123_100165163300025823Natural And Restored WetlandsMQAKRCTCPLFVAALLWALNASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGTPLDSDELEGDIREDTEPVERDIFQHELELQRQGYSVD
Ga0209456_1007649233300025883Pelagic MarineMQPKQCIRLLLVVITLWVLSASGEEQLEQETILIKGNQGLPKTLYIAPWKRVGAPLESDELDGDVGETTEPVERDLFQHELELQRQGYSTD
Ga0209578_1011023323300027820Marine SedimentMQSIPCIRLLLVVVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLKSDGLEGDVGEESEPVERDMFQRELELQRQGYSID
Ga0209633_10001263273300027822MarineMQSEQYIRLLLVAVTLWVLPASGEEQLEQETISIKGNQGLPNTLYIAPWKRVGAPLESEGLEGDIGEESEPVERDIFQRELELQRQGYSVD
Ga0209692_1025109313300027828Marine SedimentMQPELTIRLLLVALTLWVLPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDELEGEVGQEMQPVERDIFQRKLELQRQGYSVDQVD
Ga0209013_1001176633300027858MarineMQPKQCIRLLLVAATLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLDSDKLDGDVGEETDPLERDIFQRELELQRQGYSID
Ga0209013_1001633933300027858MarineMQSIPCIRLLLVAVTLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLKSDDLEGDVGKETEPVERDIFQRELELQRQGFSVD
Ga0209013_1014750523300027858MarineMQPKQTIRLLLVVATLWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGEVGEETEPVERDIFQRELELQRQGYSID
Ga0209013_1049950223300027858MarineMQTRQCVQLLLVVATLWVLPTSGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLEGDVIDGDVGEETEPLERDIFQRELELQRQGYSID
(restricted) Ga0233415_1004686213300027861SeawaterMRQLSRYIVAVFVSGALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSKPVERDMFQRQLQLQREGYSID
(restricted) Ga0233415_1034247823300027861SeawaterMQSISCIRMLLVVVSLWVLPTSGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDGLDGDVGEESEPVERDMFQRELELQRQGYSVD
Ga0209536_10051479923300027917Marine SedimentMQPNQCVRLLLAITLLWVLPASGQEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLETEGLEGDIGEDTEPVERDMFQRELELQRQGYSVD
Ga0209165_1003611213300027978Marine SedimentMQPELTIRLLLVALTLWVLPASGEEQLEQDTISIKGNQGLPKTLYIAPWKRVGAPLESDGLEGDVGEESRPVERDMFQRELELQRQGYSVD
(restricted) Ga0233413_1003049433300027996SeawaterMRQLNRYIVAVFVSGALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGKIREQSEPLERDMFQRQLQLQREGYSID
(restricted) Ga0233414_1004297623300028045SeawaterMQLKQCLCVLFVIVKLSILPASAEQPLEQETISIKGNQGLPKTLYIAPWKRVGAPLENDELEGEVGQEMQPVERDIFQRKLELQRQGYSVDQVD
(restricted) Ga0233414_1042401923300028045SeawaterMRQLSRYIVAVFVSGALCLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSKPVERDMFQRQLQLQREGYS
Ga0265306_1003103643300028598SedimentMRQLNRFIVAVFVTGALWLTAVAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSKPVERDMFQRQLQLQREGYSID
Ga0265306_1027564623300028598SedimentMHRKLYIRLLLVAVTLWVLPASGEQQLEQETISIKGNQGLPKTMYIAPWKRVGEPLESGELEGDVGEETQPLERDMFQRELELQRQGYSID
Ga0265306_1048081013300028598SedimentNMQPKQCIRLLLVVITLWVLSASGEEQLEQETILIKGNQGLPKTLYIAPWKRVGAPLESDELDGDVGETTEPVERDLFQHELELQRQGYSTD
Ga0265309_1032326723300028599SedimentMQSPQCIRLLLVAVALWALPASGEQQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELDGDVGETTEPVERDLFQHELELQRQGYSTD
Ga0265309_1094810223300028599SedimentMRQLNRFSVAVFVAGALWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID
Ga0265303_1029161913300028600SedimentMRQLNRHIVAVFVTGALWLNAAVAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSKPVERDMFQRQLQLQREGYSID
Ga0265303_1031951123300028600SedimentMQPKYTFRLLLFAVTLWSLNARGQEQLEQDAISIKGNQGLPGTLYIAPWKRVGAPLESAELEGDVGKETKPLERDIFQ
Ga0316201_1082747323300032136Worm BurrowVFVTGVLWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID
Ga0316187_1000704583300032231Worm BurrowMQPQQCLRLLLVVVALWVLPASGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLASGQLEGDVGKETEPVERDMFQRELELQRQGYSVE
Ga0316187_1004735223300032231Worm BurrowMRQLNRHIVAVFVIGALWLTAAVAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID
Ga0316198_1020093823300032251SedimentMRQLNRFIVAVFVTGALWLTAVAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQAKPLERDMFQRQLQLQREGYSID
Ga0316198_1038857113300032251SedimentMQQLKKCITGIIAIAALCLSSAMAEQQLEQETISIKGNQALPKTLYIAPWKRVGAPLEGDRIDAEITEESKPLERDMFQRQLELQRKGYSID
Ga0316196_1010059623300032252SedimentMQQLKKCITGIIAIAALWLSSAMAEQQLEQETISIKGNQALPKTLYIAPWKRVGAPLEGDRIDAEITEESKPLERDMFQRQLELQRKGYSID
Ga0316196_1018842623300032252SedimentFVTGVLWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID
Ga0316196_1021176223300032252SedimentMRLLNRHIVAVFATGALWLTAVAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSKPVERDIFQRQLQLQREGYSID
Ga0316191_1007889813300032258Worm BurrowMQLKQCLCVLFVIVKLSILPASAEQPLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELEGEVGQEMQPVERDIFQRKLELQRQGYSVDQVD
Ga0316191_1071207823300032258Worm BurrowMQQLKKCMTGIIAIAALWLSSAMAEQQLEQETISIKGNQALPKTLYIAPWKRVGAPLEGDRIDAEITEESKPLERDMFQRQLELQRKGYSID
Ga0316191_1134831013300032258Worm BurrowMQLKQCLCVLFVIVKLSILPASAEQPLEQETISIKGNQGLPKTLYIAPWKRVGAPLESGELEGEVGQETQPVERDIFQRELELQRQGYSVD
Ga0316190_1079382213300032259Worm BurrowMRLLNRHIVAVFATGALWLTAVAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSKPVERDIFQRQLQLQ
Ga0316190_1097979513300032259Worm BurrowMQPKQCVRLLLAITLLWVLPASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLETEGLEGDIGEDTEPVERD
Ga0316192_1017771523300032260Worm BurrowMRQLNRHIVAVFVTGALWLTAAVAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID
Ga0316194_1014596623300032262SedimentMQPKQCVRLLLAITLLWVLPASGQEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLETEGLEGDIGEDTEPVERDMFQRELELQRQGYSVD
Ga0316189_1063005523300032272Worm BurrowMQTKRYLCRLLVAITLWVSPVSGEEQLEQETISIKGNQGLPKTLYIAPWKRVGAPLESDELEGDVGTETEPVERDMFQRELELQRQGYSID
Ga0316189_1124482313300032272Worm BurrowMRQLNRHIVAVFVTGALWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIHEQSEPVERDMFQRQLQLQREGYSID
Ga0316197_1034302913300032273SedimentMRQLNRHMVAVFVTGVLWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID
Ga0316193_1012417633300033429SedimentMRQLNRHIVAVFVTGALWLTAAAAEEQLQQDTISIKGNQALPKTLYIAPWKRVGAPLESGQIDGEIREQSEPLERDMFQRQLQLQREGYSID

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.