Metagenome Family F068702

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068702
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	72 residues
Representative Sequence	VPKKSRSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK
Number of Associated Samples	79
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.71 %
% of genes near scaffold ends (potentially truncated)	47.58 %
% of genes from short scaffolds (< 2000 bps)	84.68 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.839 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.097 % of family members)
Environment Ontology (ENVO)	Unclassified (62.903 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.806 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.04% β-sheet: 0.00% Coil/Unstructured: 48.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF11064	DUF2865	1.63
PF13356	Arm-DNA-bind_3	0.81
PF04324	Fer2_BFD	0.81
PF12697	Abhydrolase_6	0.81
PF07690	MFS_1	0.81
PF00196	GerE	0.81
PF00561	Abhydrolase_1	0.81
PF01527	HTH_Tnp_1	0.81
PF01464	SLT	0.81
PF04892	VanZ	0.81
PF04542	Sigma70_r2	0.81
PF02518	HATPase_c	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.81
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.81
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.84 %
All Organisms	root	All Organisms	20.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.84 %
cellular organisms	root	All Organisms → cellular organisms	20.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.45 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.03 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.03 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11820985	Not Available	618	Open in IMG/M
3300000858\|JGI10213J12805_10192020	Not Available	559	Open in IMG/M
3300004633\|Ga0066395_10922699	Not Available	529	Open in IMG/M
3300005713\|Ga0066905_101190626	Not Available	681	Open in IMG/M
3300005764\|Ga0066903_100253003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2721	Open in IMG/M
3300005764\|Ga0066903_100507182	Not Available	2047	Open in IMG/M
3300005764\|Ga0066903_101003355	Not Available	1526	Open in IMG/M
3300005764\|Ga0066903_101007925	Not Available	1523	Open in IMG/M
3300005764\|Ga0066903_101473046	Not Available	1283	Open in IMG/M
3300005764\|Ga0066903_102432624	Not Available	1013	Open in IMG/M
3300005764\|Ga0066903_102604006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	980	Open in IMG/M
3300005764\|Ga0066903_102799284	Not Available	946	Open in IMG/M
3300005764\|Ga0066903_102847782	Not Available	938	Open in IMG/M
3300005764\|Ga0066903_103093366	Not Available	901	Open in IMG/M
3300005764\|Ga0066903_104223639	Not Available	768	Open in IMG/M
3300005764\|Ga0066903_105754052	Not Available	651	Open in IMG/M
3300005764\|Ga0066903_106532424	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_107053363	Not Available	582	Open in IMG/M
3300006049\|Ga0075417_10742817	Not Available	506	Open in IMG/M
3300006755\|Ga0079222_10782566	Not Available	775	Open in IMG/M
3300006844\|Ga0075428_100082839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3500	Open in IMG/M
3300006846\|Ga0075430_100286527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1363	Open in IMG/M
3300006847\|Ga0075431_100038276	All Organisms → cellular organisms → Bacteria → Proteobacteria	4938	Open in IMG/M
3300006852\|Ga0075433_11202718	Not Available	658	Open in IMG/M
3300006853\|Ga0075420_100245328	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300006854\|Ga0075425_100451961	Not Available	1480	Open in IMG/M
3300006914\|Ga0075436_100483448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	904	Open in IMG/M
3300009100\|Ga0075418_10584478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1201	Open in IMG/M
3300009792\|Ga0126374_11556653	Not Available	544	Open in IMG/M
3300010046\|Ga0126384_10517752	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300010358\|Ga0126370_10712116	Not Available	883	Open in IMG/M
3300010366\|Ga0126379_11076956	Not Available	909	Open in IMG/M
3300010366\|Ga0126379_11169162	Not Available	876	Open in IMG/M
3300010376\|Ga0126381_102625114	Not Available	721	Open in IMG/M
3300010398\|Ga0126383_10452713	Not Available	1333	Open in IMG/M
3300010398\|Ga0126383_11770359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300012169\|Ga0153990_1112359	Not Available	608	Open in IMG/M
3300012169\|Ga0153990_1127153	Not Available	568	Open in IMG/M
3300012180\|Ga0153974_1006571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2435	Open in IMG/M
3300012948\|Ga0126375_11174656	Not Available	637	Open in IMG/M
3300015371\|Ga0132258_12878054	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300015373\|Ga0132257_101941083	Not Available	758	Open in IMG/M
3300016270\|Ga0182036_10486766	Not Available	975	Open in IMG/M
3300016270\|Ga0182036_11705993	Not Available	532	Open in IMG/M
3300016294\|Ga0182041_10113435	Not Available	2019	Open in IMG/M
3300016319\|Ga0182033_11681322	Not Available	575	Open in IMG/M
3300016357\|Ga0182032_11796432	Not Available	536	Open in IMG/M
3300016371\|Ga0182034_10789550	Not Available	812	Open in IMG/M
3300016371\|Ga0182034_10852898	Not Available	781	Open in IMG/M
3300016422\|Ga0182039_10193225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1617	Open in IMG/M
3300016422\|Ga0182039_10565929	Not Available	990	Open in IMG/M
3300016422\|Ga0182039_11807101	Not Available	560	Open in IMG/M
3300021560\|Ga0126371_10292310	Not Available	1754	Open in IMG/M
3300021560\|Ga0126371_10688138	Not Available	1171	Open in IMG/M
3300027874\|Ga0209465_10209084	Not Available	974	Open in IMG/M
3300027909\|Ga0209382_10013044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10223	Open in IMG/M
3300031543\|Ga0318516_10088850	Not Available	1733	Open in IMG/M
3300031543\|Ga0318516_10662577	Not Available	594	Open in IMG/M
3300031545\|Ga0318541_10108848	Not Available	1495	Open in IMG/M
3300031545\|Ga0318541_10108848	Not Available	1495	Open in IMG/M
3300031545\|Ga0318541_10234856	Not Available	1018	Open in IMG/M
3300031546\|Ga0318538_10041854	Not Available	2202	Open in IMG/M
3300031549\|Ga0318571_10233071	Not Available	671	Open in IMG/M
3300031561\|Ga0318528_10034549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2501	Open in IMG/M
3300031561\|Ga0318528_10067973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1830	Open in IMG/M
3300031572\|Ga0318515_10326304	Not Available	823	Open in IMG/M
3300031573\|Ga0310915_10468792	Not Available	895	Open in IMG/M
3300031573\|Ga0310915_11048945	Not Available	567	Open in IMG/M
3300031640\|Ga0318555_10525353	Not Available	641	Open in IMG/M
3300031713\|Ga0318496_10521124	Not Available	657	Open in IMG/M
3300031719\|Ga0306917_10395591	Not Available	1078	Open in IMG/M
3300031719\|Ga0306917_11047689	Not Available	636	Open in IMG/M
3300031719\|Ga0306917_11375896	Not Available	545	Open in IMG/M
3300031736\|Ga0318501_10158889	Not Available	1167	Open in IMG/M
3300031744\|Ga0306918_10590779	Not Available	870	Open in IMG/M
3300031744\|Ga0306918_11153736	Not Available	599	Open in IMG/M
3300031744\|Ga0306918_11367100	Not Available	543	Open in IMG/M
3300031748\|Ga0318492_10162787	Not Available	1130	Open in IMG/M
3300031751\|Ga0318494_10228089	Not Available	1065	Open in IMG/M
3300031763\|Ga0318537_10262131	Not Available	641	Open in IMG/M
3300031763\|Ga0318537_10316218	Not Available	577	Open in IMG/M
3300031764\|Ga0318535_10225597	Not Available	839	Open in IMG/M
3300031765\|Ga0318554_10227948	Not Available	1061	Open in IMG/M
3300031796\|Ga0318576_10473469	Not Available	591	Open in IMG/M
3300031797\|Ga0318550_10570666	Not Available	544	Open in IMG/M
3300031798\|Ga0318523_10266313	Not Available	856	Open in IMG/M
3300031833\|Ga0310917_10670335	Not Available	703	Open in IMG/M
3300031833\|Ga0310917_10722588	Not Available	674	Open in IMG/M
3300031835\|Ga0318517_10155302	Not Available	1024	Open in IMG/M
3300031860\|Ga0318495_10136620	Not Available	1105	Open in IMG/M
3300031879\|Ga0306919_10002674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8920	Open in IMG/M
3300031879\|Ga0306919_10093379	Not Available	2101	Open in IMG/M
3300031879\|Ga0306919_10419918	Not Available	1027	Open in IMG/M
3300031879\|Ga0306919_10586120	Not Available	860	Open in IMG/M
3300031880\|Ga0318544_10389682	Not Available	541	Open in IMG/M
3300031890\|Ga0306925_10010447	All Organisms → cellular organisms → Bacteria → Proteobacteria	8890	Open in IMG/M
3300031890\|Ga0306925_10055751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4129	Open in IMG/M
3300031890\|Ga0306925_10194011	Not Available	2189	Open in IMG/M
3300031890\|Ga0306925_11874913	Not Available	571	Open in IMG/M
3300031894\|Ga0318522_10222226	Not Available	716	Open in IMG/M
3300031894\|Ga0318522_10234280	Not Available	696	Open in IMG/M
3300031897\|Ga0318520_10935248	Not Available	546	Open in IMG/M
3300031912\|Ga0306921_10262195	Not Available	2024	Open in IMG/M
3300031912\|Ga0306921_10383414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1642	Open in IMG/M
3300031912\|Ga0306921_11200724	Not Available	845	Open in IMG/M
3300031942\|Ga0310916_11562090	Not Available	537	Open in IMG/M
3300031945\|Ga0310913_10232644	Not Available	1292	Open in IMG/M
3300031946\|Ga0310910_10203840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1535	Open in IMG/M
3300031946\|Ga0310910_11203547	Not Available	588	Open in IMG/M
3300031947\|Ga0310909_10216100	Not Available	1596	Open in IMG/M
3300031954\|Ga0306926_12438409	Not Available	575	Open in IMG/M
3300031981\|Ga0318531_10067927	Not Available	1538	Open in IMG/M
3300032001\|Ga0306922_10563673	Not Available	1210	Open in IMG/M
3300032010\|Ga0318569_10428510	Not Available	617	Open in IMG/M
3300032010\|Ga0318569_10532955	Not Available	547	Open in IMG/M
3300032039\|Ga0318559_10332717	Not Available	706	Open in IMG/M
3300032042\|Ga0318545_10074040	Not Available	1174	Open in IMG/M
3300032059\|Ga0318533_10065756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2447	Open in IMG/M
3300032059\|Ga0318533_10364445	Not Available	1053	Open in IMG/M
3300032064\|Ga0318510_10023275	Not Available	2000	Open in IMG/M
3300032076\|Ga0306924_10006501	All Organisms → cellular organisms → Bacteria → Proteobacteria	11657	Open in IMG/M
3300032261\|Ga0306920_100050856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6021	Open in IMG/M
3300032261\|Ga0306920_101145237	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300033290\|Ga0318519_10138351	Not Available	1351	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.90%
Host-Associated	Host-Associated	12.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.90%
Plants	Host-Associated → Plants	9.68%
Fungi	Host-Associated → Fungi	2.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.06%
Mycelium	Host-Associated → Fungi → Mycelium	2.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.19%
Loam	Environmental → Terrestrial → Soil → Loam	13.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.06%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.06%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.06%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_118209852	3300000787	Soil	MMPKKSKSGAILECYRRAAEARRMADGATNGPAKADFLAIEQRWLSLARSDEVETVRAAPRRAPRSQRKQRGCG*
JGI10213J12805_101920201	3300000858	Soil	LECYRRAAEARRMADGATNGPAKADFLTIEQRWLSLARSYEVETVRAAPRRAPRSQRKQRGCG*
Ga0066395_109226991	3300004633	Tropical Forest Soil	RKGGSLVPKKPRSDAILECYRRAAEARRMADRATNRPEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSEHK*
Ga0066905_1011906262	3300005713	Tropical Forest Soil	VPKKSRSCVILECYRRAAEAGRMADRATNRHVKADFLAVEQRWLSLARSHKGRNGRGGAPQGSAIPAQIARSWLKRA
Ga0066903_1002530036	3300005764	Tropical Forest Soil	VPKKPRSGAIRECYRRAAEARRMADRATTRLAKKDFLAVEKRWLSLARSYEAETVSAPPRRAPRSEHK*
Ga0066903_1005071825	3300005764	Tropical Forest Soil	MPKKSKSDAILECYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSHHK*
Ga0066903_1010033552	3300005764	Tropical Forest Soil	VPKKSRSGAILECYRRAAEARRMADHANPPAKADFLAIEQRWLSLARSYEVETLRAAPRKPPRSERKQRGRG*
Ga0066903_1010079251	3300005764	Tropical Forest Soil	MPKKSKSDAIREFYRRAAEARRMADAATNRLAKADFLAIEKRWLSLARSSEAETVRSPPPEHK*
Ga0066903_1014730463	3300005764	Tropical Forest Soil	VAKKSRSDAILESYRRAAEARRMADRATNRPEKADFLAIEQRWLSMARSYEAETVRAAPRRPPRSKHK*
Ga0066903_1024326242	3300005764	Tropical Forest Soil	VPKKPMSDAILECYRRAAEARRMADRATNRPEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSEHK*
Ga0066903_1026040061	3300005764	Tropical Forest Soil	VSKKSRSGVILECYRRAAEARRMADRATNWSEKEDFLAIEQRWLSMARSYEAETVRAAPPQASAIRHK*
Ga0066903_1027992841	3300005764	Tropical Forest Soil	VPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG*
Ga0066903_1028477822	3300005764	Tropical Forest Soil	VPKKSRSGVIREFYRRAAEARRMADRATERSAKADFLAIEKRWLSLARSYEAETVRAAPRRAPRSKHK*
Ga0066903_1030933662	3300005764	Tropical Forest Soil	VPKKSRSDAILDCYRRAAEARRMADRASNRPAKADFLAVEQRWLSLARSYEAEMVRAAPRRAPQSQHK*
Ga0066903_1042236392	3300005764	Tropical Forest Soil	VPKKSRSGAILEFYRRAAEARRMADRATDRSAKADLLAIEQRWLSLARSYEAETVRAAPRRAPRSPHK*
Ga0066903_1057540521	3300005764	Tropical Forest Soil	MPKSSKSDAILEFYHRAAEARRMADRATDRPAKADFLAIEQRWLSLARSYEAKAGRAAPRRAPRYERKQRGRR*
Ga0066903_1065324241	3300005764	Tropical Forest Soil	VPKRSRSGTILDCYRRAAEARRMADGATNWLEKEDFLSIEQRWLSLARGYEAETVRAAPRRAPRSQRKQRIRG*
Ga0066903_1070533632	3300005764	Tropical Forest Soil	MAKKSRSGVILECYRRAAEARRMADRATNRPAKADLLAIEQRWLSLARSYEVETVRAAPRRAPRSERKQLGRG*
Ga0075417_107428171	3300006049	Populus Rhizosphere	VILSLECYRRAAEARRMADGATKGPAKADFLAIEQRWLSLARSYEVETVRAAPRRAPRSQRKQRGCG*
Ga0079222_107825661	3300006755	Agricultural Soil	VPKKSRSGAILEFYRRAAEARRMADGATNRPAKADFLAIEQHWLSLARSYEAETVTAAPRRAPQSQHK*
Ga0075428_1000828391	3300006844	Populus Rhizosphere	VPKKSRSGVILSLECYRRAAEARRMADGATKGPAKADFLAIEQRWLSLARSYEVETVRAAPRRAPRSQRKQRGCG*
Ga0075430_1002865272	3300006846	Populus Rhizosphere	VPKKSRSGAILECYRRAAEARRMADGATNGPAKADFLAIEQRWLSLARSYEVETVRAAPRRAPRSQRKQRGCG*
Ga0075431_1000382763	3300006847	Populus Rhizosphere	MMPKKSRSGVILSLECYRRAAEARRMADGATKGPAKADFLAIEQRWLSLARSYEVETVRAAPRRAPRSQRKQRGCG*
Ga0075433_112027182	3300006852	Populus Rhizosphere	VPKKSRSGAILECYRRAAEARRMADGATKGPAKADFLAIEQRWLSLARSYEVETVRAAPRRAPRSQRKQRGCG*
Ga0075420_1002453281	3300006853	Populus Rhizosphere	GGSLVPKKSRSGAILECYRRAAEARRMADGATKGPAKADFLAIEQRWLSLARSYEVETVRAAPRRAPRSQRKQRGCG*
Ga0075425_1004519611	3300006854	Populus Rhizosphere	VPKKSRSGVILECYRRAAEARRMADGATNRPAKADFLAIEQRWLSLARSYEAETVTAVPRRVPQSQHK*
Ga0075436_1004834483	3300006914	Populus Rhizosphere	VPKKSRSGVILECYRRAAEARRMADGATNRPAKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK*
Ga0075418_105844782	3300009100	Populus Rhizosphere	VPKKSRSGAILECYRRAAEARRMADGSTNRPAKADFLAIERRWLSLARSDEVETVRAAPRRAPRSQRKQRGCG*
Ga0126374_115566531	3300009792	Tropical Forest Soil	VPKKSRSGAILECYRRAAEARRMADRATNRLEQEDFLAIEQRWLSLARGCYEAETVRAVPRRAPRSERKQRGRG*
Ga0126384_105177522	3300010046	Tropical Forest Soil	VPKKSRSDAIREFYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARSYEAKAGRAAPRRAPRYERK
Ga0126370_107121161	3300010358	Tropical Forest Soil	VPKKSRSGAILEFYRRAAEARRMADRATERSAKADFLAIEKRWLSLARSYEAETVSAPSRRAPRSEHK*
Ga0126379_110769561	3300010366	Tropical Forest Soil	PSAFPIRPSRKGGSLVPKKSRSGAILEFYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARSYEAEAVRAAPRRAPRSERKQRGRR*
Ga0126379_111691621	3300010366	Tropical Forest Soil	LVPKKSRSGAILECYRRAAEARRMADHANPPAKADFLAIEQRWLSLARSYEVETLRAAPRKPPRSERKQRGRG*
Ga0126381_1026251142	3300010376	Tropical Forest Soil	MPKSSKSDAILEFYHRAAEARRMADRATNRLEQEDFLAIEQRWLSLARSYEASLVQLSPAPHPRSGPKIPQFPLTPS*
Ga0126383_104527132	3300010398	Tropical Forest Soil	VLKKPRSDAILECYRRAAEARRMADRATNRLEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSEHK*
Ga0126383_117703591	3300010398	Tropical Forest Soil	ILECYRRAAEARRMADRATNRPAKADFLEIEPRWLSLARSYEAETVRAAPRRVPRSPHK*
Ga0153990_11123591	3300012169	Attine Ant Fungus Gardens	MNVTPLRSDQDRKGRSLVPKKSRSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVRAAPRRAPRFEHKLRGRG*
Ga0153990_11271532	3300012169	Attine Ant Fungus Gardens	SRSGVTILECYRRAAEARRTADGATNRPEKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK*
Ga0153974_10065716	3300012180	Attine Ant Fungus Gardens	VPKKESRSGVTILECYRRAAEARRTADGATNRPEKADFLAIEQRWLSLAHSHEVEPRSQRKQRG*
Ga0126375_111746561	3300012948	Tropical Forest Soil	VPKKSRSGAILEFYRRAAEARRMADRATDRSAKADLLAIEQRWLSLARSYEAETVSAAPRRAPRSPHK*
Ga0132258_128780543	3300015371	Arabidopsis Rhizosphere	LVPKKSRSGVILECYRRAAEARRMADRATNRPAKADYLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK*
Ga0132257_1019410832	3300015373	Arabidopsis Rhizosphere	VPKKSRSGAILECYRRAAEARRMADRATNRPAKEDFLAIEQRWLSLARTYDAETVRAASRRAPRSPRK*
Ga0182036_104867661	3300016270	Soil	VPKKSRSDAILECYRRAAEARRMADRATNRPAKAGFLAIEQRWLSLARSYETETVRAAP
Ga0182036_117059931	3300016270	Soil	MAKKSRSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVGATPRRAPQSQKSR
Ga0182041_101134351	3300016294	Soil	KKSRSGAVQEFYRRAAEARRMADRATDRSAKADFLAIEQRWLSLARSCEAETVRAAPLRAPRSPHK
Ga0182033_116813221	3300016319	Soil	LVPKKSRSGVVQECYRRAADAQRMADRATNRPAKADFPAIEQRWLSLARSYEAETVRA
Ga0182032_117964321	3300016357	Soil	MAKKSRSGVILECYRRAAEARRMADVATNPLAKADFLAIEQHWLSLARSYEAETVRAAPRRAPRSPHK
Ga0182034_107895502	3300016371	Soil	DPTKPERRVVGAKKSRSGAILEFYRRAAEARRMADVATNPLAKADFLAIEQRWLSLARSYEAETVGATPRRAPQSQKSRLKRGPRLGCG
Ga0182034_108528981	3300016371	Soil	SGAILDCYRRAAEARRMADRVTNRLEKEDFLAIEQRWLSLARSYEAQTVRAAPRRAPRAQRKQRGRG
Ga0182039_101932253	3300016422	Soil	VPKKSRSGAILECYRRAAEARRMADRATNRPAKADFLAVEQRWLSLARSYEAETVRAAPRGAPQSQHK
Ga0182039_105659292	3300016422	Soil	IGAKKSRSGAVQEFYRRAAEARRMADRATDRSAKADFLAIEQRWLSLARSYEAETVRAAPLRAPRSPHK
Ga0182039_118071012	3300016422	Soil	VPKKSRSDAILGCYRRAAEARRMAHRATNRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRS
Ga0126371_102923102	3300021560	Tropical Forest Soil	VPKKSRSGAILEFYRRAAEARRMADRATDRSAKADLLAIEQRWLSLARSYEAETVRAAPRRAPRSPHK
Ga0126371_106881382	3300021560	Tropical Forest Soil	VPKKSRSGVIREFYRRAAEARRMADRATERSAKADFLAIEKRWLSLARSYEAETVRAAPRRAPRSKLK
Ga0209465_102090842	3300027874	Tropical Forest Soil	VPKKSRSGVIREFYRRAAEARRMADRATERSAKADFLAIEKRWLSLARSYEAETVRAAPRRAPRSEHK
Ga0209382_100130443	3300027909	Populus Rhizosphere	MMPKKSRSGVILSLECYRRAAEARRMADGATKGPAKADFLAIEQRWLSLARSYEVETVRAAPRRAPRSQRKQRGCG
Ga0318516_100888501	3300031543	Soil	VPKKPRSDAIREFYRRAAEARRMADSAANRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSERKQRDRG
Ga0318516_106625771	3300031543	Soil	ILECYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARNYEAETVRAAPRRAPQSQHK
Ga0318541_101088482	3300031545	Soil	MTGSTVDGIVAPLRSDQDRKGGLLVPKKSRSCVILECYRRAAEAGRMADRATNRHVKADFLAIEQRWLSLARRYKAETVTAAPRRAPRSPHK
Ga0318541_101088484	3300031545	Soil	VPKKSRSDAILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYETETVRAAPRRAP
Ga0318541_102348561	3300031545	Soil	VPKKSWSGVILECYRRAAEARRMADRATNWPAKADFLAIEQRWLSLARGYEAETVGAAPRRAPQSQHK
Ga0318538_100418541	3300031546	Soil	ECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG
Ga0318571_102330711	3300031549	Soil	HEPSQYPRGKRGAILDCYRRAAEARRMADRATNRLEQEDFLAIEQRWLSLARRYKAETVTAAPRRAPRSPHK
Ga0318528_100345491	3300031561	Soil	VPKKSRSDAILECYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARNYEAETVRAAPRRAPQSQHK
Ga0318528_100679733	3300031561	Soil	VPKKSRSGAVQEFYRRAAEARRMADRATDRSAKADFLAIEQRWLSLARSCEAETVRAAPLRAPRSPHK
Ga0318515_103263041	3300031572	Soil	VPKKSWSGVILECYRRAAEARRMADRATNRPAKADFLAVEQRWLSLARSYEAETVRAAPRGAPQSQHK
Ga0310915_104687921	3300031573	Soil	MAKKSRSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVGATPRRAPQSQKSRLKRGPRLGCG
Ga0310915_110489452	3300031573	Soil	TNGRYERNVSLIRPRRKGGSLVPKKSRSDAILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYETETVRAAPRRAPQSPHK
Ga0318555_105253531	3300031640	Soil	RYERNASLIRPRRKGGSLVPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG
Ga0318496_105211241	3300031713	Soil	VPKKSRSGVILECYRRAAEARRMADGATNRPAKADFLAIEQRWLSLARSYEAETVTAVPRRVPQSQHK
Ga0306917_103955913	3300031719	Soil	VPKKSRSDAILGCYRRAAEARRMAHRATNRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSERKQ
Ga0306917_110476891	3300031719	Soil	PRGKRGAILDCYRRAAEARRMADRATNRLEQEDFLAIEQRWLSLARGCYEAETVRAVLRRAPRSERKQRGRG
Ga0306917_113758961	3300031719	Soil	VPKKSRSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK
Ga0318501_101588891	3300031736	Soil	VPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSEHKQRGRG
Ga0306918_105907792	3300031744	Soil	VPIKSRSSVIQEFYRRAAEARRMADRATDRSAKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK
Ga0306918_111537362	3300031744	Soil	VPKKSRSGAILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEVETVRAAPLRASRSQRKQRGRG
Ga0306918_113671001	3300031744	Soil	DHKKPRSGAILDCYRRAAEARRMADRVTNRLEKEDFLAIEQRWLSLARSYEAQTVRAAPRRAPRAQRKQRGRG
Ga0318492_101627873	3300031748	Soil	PTNGRYERNASLIRPSRKGGSLVPKKPRSDAIREFYRRAAEARRMADSAANRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSERKQRDRG
Ga0318494_102280892	3300031751	Soil	ASLIRPRRKGGSLVPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG
Ga0318537_102621311	3300031763	Soil	ILECYRRAAEARRMADGATNRPAKADFLAIEQRWLSLARSYETETVRAAPRRAPQSPHK
Ga0318537_103162182	3300031763	Soil	ILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG
Ga0318535_102255971	3300031764	Soil	MTGSTVDGIVAPLRSDQDRKGGLLVPKKSRSCVILECYRRAAEAGRMADRATNRHVKADFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG
Ga0318554_102279483	3300031765	Soil	VQEFYRRAAEARRMADRATDRSAKADFLAIEQRWLSLARSCEAETVRAAPLRAPRSPHK
Ga0318576_104734691	3300031796	Soil	VPKKSRSCVILECYRRAAEAGRMADRATNRHVKADFLAIEQRWLSLARRYKAETVTAAPRRAPR
Ga0318550_105706662	3300031797	Soil	VPKKSRSCVILECYRRAAEAGRMADRATNRHVKADFLAIEQRWLSLARRYKAETVTAAP
Ga0318523_102663132	3300031798	Soil	PSRKGGSLVPKKSRSDAILECYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARNYEAETVRAAPRRAPQSQHK
Ga0310917_106703352	3300031833	Soil	VPKKSRSDAILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVTAVPRRVPQSQHK
Ga0310917_107225882	3300031833	Soil	GAILECYRRAAEARRMADRATNPPAKADFRAIEQRWLSLARSYEVETLRAAPRKPPRSERKQRGRG
Ga0318517_101553021	3300031835	Soil	TPTNGRYERNASLIRPRRKGGSLVPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG
Ga0318495_101366201	3300031860	Soil	VDPTNGRYERNASLIRPRRKGGSLVPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG
Ga0306919_100026749	3300031879	Soil	VPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPRRAPRSGRKQRGRG
Ga0306919_100933794	3300031879	Soil	VPKKSRSDAILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYETETVRAAPRRAPQSPHK
Ga0306919_104199182	3300031879	Soil	LVPKKSRSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK
Ga0306919_105861201	3300031879	Soil	VPKKSRSDAILGCYRRAAEARRMAHRATNRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSER
Ga0318544_103896822	3300031880	Soil	RNASLIRPSRKGGSLVPKKSRSDAILECYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARNYEAETVRAAPRRAPQSQHK
Ga0306925_100104471	3300031890	Soil	LECYRRAAEARRMADRATNRPAKADFLAVEQRWLSLARSYEAETVRAAPRGAPQSQHK
Ga0306925_100557512	3300031890	Soil	VPKKSKSGAILECYRRAAEARRMADRATNPPAKADFRAIEQRWLSLARSYEVETLRAAPRKPPRSERKQRGRG
Ga0306925_101940111	3300031890	Soil	VPKKPRSDAIREFYRRAAEARRMADSAANRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRS
Ga0306925_118749131	3300031890	Soil	AKKSRSGVILECYLRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVGATPRRAPQSQKSRLKRGPRLGCG
Ga0318522_102222261	3300031894	Soil	LGTNGRYERNASLIRPRRKGGSLVPKKSRSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARNYEAETVRAAPRRAPQSQHK
Ga0318522_102342801	3300031894	Soil	HKKPRSGAILDCYRRAAEARRMADRVTNRLEKEDFLAIEQRWLSLARSYEAQTVRAAPRRAPRAQRKQRGRG
Ga0318520_109352482	3300031897	Soil	VPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVKAAPRRAPRSGRKQRGRG
Ga0306921_102621951	3300031912	Soil	ERRVIGAKKSRSGAVQEFYRRAAEARRMADRATDRSAKADFLAIEQRWLSLARSCEAETVRAAPLRAPRSPHK
Ga0306921_103834141	3300031912	Soil	ASLIRPRGKGGSLVPKKSRSGAILECYRRAAEARRMADRATNWPAKADFLAIEQRWLSLARGYEAETVGAAPRRAPQSQHK
Ga0306921_112007243	3300031912	Soil	ECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK
Ga0310916_115620901	3300031942	Soil	VPKKSRSGAILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEVETVRAAPLRA
Ga0310913_102326441	3300031945	Soil	TNGRYERNVSLIRPRRKGGSLVPKKSRSDAILGCYRRAAEARRMAHRATNRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSERKQRDRG
Ga0310910_102038401	3300031946	Soil	VPKKSKSGAILECYRRAAEARRMADRATNPPAKADFRAIEQRWLSLARSYEVETLRAAPRKPPRS
Ga0310910_112035471	3300031946	Soil	VPKKSWSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEVETVRAAPLRASRSQRKQRGRG
Ga0310909_102161003	3300031947	Soil	VDGIVAPLRSDQDRKGGLLVPKKSRSCVILECYRRAAEAGRMADRATNRHVKADFLAIEQRWLSLARRYKAETVTAAPRRAPRSPHK
Ga0306926_124384092	3300031954	Soil	SDQDGRKGESLVPKKSRSGVILECYRRAAEARRMADGATNRPAKADFLAIEQRWLSLARSYEAETVTAVPRRVPQSQHK
Ga0318531_100679271	3300031981	Soil	ILGCYRRAAEARRMAHRATNRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSERKQRDRG
Ga0306922_105636731	3300032001	Soil	VILECYRRAAEARRMADGATNRPAKADFLAIEQRWLSLARSYEAETVTAVPRRVPQSQHK
Ga0318569_104285102	3300032010	Soil	VPKKSWSGVILECYRRAAEARRMADRATNRPAKADFLAVEQRWLSLARSYEAETVRAAPR
Ga0318569_105329551	3300032010	Soil	IREFYRRAAEARRMADSAANRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSERKQRDRG
Ga0318559_103327171	3300032039	Soil	NGRYERNASLIRPSRKGGSLVPKKSRSDAILECYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARNYEAETVRAAPRRAPQSQHK
Ga0318545_100740403	3300032042	Soil	LIRPSRKGGSLVPKKPRSDAIREFYRRAAEARRMADSAANRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSERKQRDRG
Ga0318533_100657564	3300032059	Soil	SRKGGSLVPKKSRSDAILECYRRAAEARRMADRATDRPAKADFLAIEQRWLSLARNYEAETVRAAPRRAPQSQHK
Ga0318533_103644452	3300032059	Soil	VPKKSKSGAILECYRRAAEARRMADRATNPPAKADFRAIEQRWLSLARSYEVETLRAAPRKPPRSEHKQRGRG
Ga0318510_100232752	3300032064	Soil	VPKKPRSDAILECYRRAAEARRMAERATDRVEKEDFLAIEQRWLSLARSYEAETVRAAPLRAPRAQRKQRGRG
Ga0306924_100065011	3300032076	Soil	LVPKKPRSDAIREFYRRAAEARRMADSAANRPAKADFLAIEQRWLSLARSYEVETVSAAP
Ga0306920_1000508563	3300032261	Soil	VPKKSRSDAILGCYRRAAEARRMAHRATNRPAKADFLAIEQRWLSLARSYEVETVSAAPRRPPRSERKQRDRG
Ga0306920_1011452373	3300032261	Soil	LIRPRRKGGSLVPKKSRSGVILECYRRAAEARRMADRATNRPAKADFLAIEQRWLSLARSYEAETVRAAPRRAPQSQHK
Ga0318519_101383511	3300033290	Soil	IGHRTQRLSDPTQDGKGGSLVPEKSRSGAVQEFYRRAAEARRMADRATDRSAKADFLAIEQRWLSLARSCEAETVRAAPLRAPRSPHK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068702

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences