Metagenome / Metatranscriptome Family F068665

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068665
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	110 residues
Representative Sequence	MMRPRPALIFEDSSAALEWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Number of Associated Samples	91
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.00 %
% of genes near scaffold ends (potentially truncated)	32.26 %
% of genes from short scaffolds (< 2000 bps)	64.52 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.161 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.452 % of family members)
Environment Ontology (ENVO)	Unclassified (49.194 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.452 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 28.46% Coil/Unstructured: 51.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF13146	TRL	37.10
PF01522	Polysacc_deac_1	4.03
PF07681	DoxX	2.42
PF05199	GMC_oxred_C	2.42
PF07731	Cu-oxidase_2	2.42
PF00069	Pkinase	2.42
PF00561	Abhydrolase_1	1.61
PF12704	MacB_PCD	1.61
PF02678	Pirin	1.61
PF02452	PemK_toxin	1.61
PF06821	Ser_hydrolase	1.61
PF01435	Peptidase_M48	1.61
PF00158	Sigma54_activat	1.61
PF01713	Smr	1.61
PF13692	Glyco_trans_1_4	0.81
PF06580	His_kinase	0.81
PF13546	DDE_5	0.81
PF00871	Acetate_kinase	0.81
PF03713	DUF305	0.81
PF01799	Fer2_2	0.81
PF07719	TPR_2	0.81
PF02153	PDH_N	0.81
PF00999	Na_H_Exchanger	0.81
PF02687	FtsX	0.81
PF00171	Aldedh	0.81
PF01797	Y1_Tnp	0.81
PF04166	PdxA	0.81
PF00528	BPD_transp_1	0.81
PF00005	ABC_tran	0.81
PF00378	ECH_1	0.81
PF06808	DctM	0.81
PF04290	DctQ	0.81
PF04972	BON	0.81
PF08818	DUF1801	0.81
PF07978	NIPSNAP	0.81
PF00892	EamA	0.81
PF00534	Glycos_transf_1	0.81
PF03795	YCII	0.81
PF02805	Ada_Zn_binding	0.81
PF13470	PIN_3	0.81
PF00106	adh_short	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	9.68
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	4.03
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.42
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	2.42
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	2.42
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.42
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.61
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	1.61
COG3545	Predicted esterase of the alpha/beta hydrolase fold	General function prediction only [R]	1.61
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.81
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.81
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.81
COG3426	Butyrate kinase	Energy production and conversion [C]	0.81
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.81
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.81
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.81
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.81
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.81
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.81
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.81
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	Replication, recombination and repair [L]	0.81
COG1995	4-hydroxy-L-threonine phosphate dehydrogenase PdxA	Coenzyme transport and metabolism [H]	0.81
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.81
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.81
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.81
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.81
COG0282	Acetate kinase	Energy production and conversion [C]	0.81
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.81

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.13 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.13 %
Unclassified	root	N/A	4.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	30.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.13 %
Unclassified	root	N/A	4.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	30.65 %
Acidobacteria bacterium 13_2_20CM_2_66_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	16.13 %
Unclassified	root	N/A	4.84 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	25.81 %
Acidobacteria bacterium 13_2_20CM_2_66_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	16.13 %
Unclassified	root	N/A	4.84 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.81 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.81 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	25.81 %
Acidobacteria bacterium 13_2_20CM_2_66_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	16.13 %
Unclassified	root	N/A	4.84 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.81 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.81 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.81 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	25.81 %
Acidobacteria bacterium 13_2_20CM_2_66_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	16.13 %
Unclassified	root	N/A	4.84 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.81 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.81 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.81 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	25.81 %
Acidobacteria bacterium 13_2_20CM_2_66_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	16.13 %
Unclassified	root	N/A	4.84 %
Corallococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus	0.81 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.81 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.81 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	25.81 %
Acidobacteria bacterium 13_2_20CM_2_66_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	16.13 %
Unclassified	root	N/A	4.84 %
Corallococcus coralloides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus coralloides	0.81 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.81 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.81 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10072733	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1091	Open in IMG/M
3300002562\|JGI25382J37095_10065902	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300002908\|JGI25382J43887_10364448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	611	Open in IMG/M
3300002912\|JGI25386J43895_10191667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	513	Open in IMG/M
3300003321\|soilH1_10230521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2579	Open in IMG/M
3300003324\|soilH2_10109816	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300005171\|Ga0066677_10017366	All Organisms → cellular organisms → Bacteria → Proteobacteria	3261	Open in IMG/M
3300005174\|Ga0066680_10123308	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300005175\|Ga0066673_10171795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1220	Open in IMG/M
3300005175\|Ga0066673_10229988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	1068	Open in IMG/M
3300005175\|Ga0066673_10239661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	1047	Open in IMG/M
3300005176\|Ga0066679_10083840	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300005177\|Ga0066690_10199727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1330	Open in IMG/M
3300005178\|Ga0066688_10015109	All Organisms → cellular organisms → Bacteria → Proteobacteria	3943	Open in IMG/M
3300005179\|Ga0066684_10011888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4251	Open in IMG/M
3300005179\|Ga0066684_10012829	All Organisms → cellular organisms → Bacteria → Proteobacteria	4129	Open in IMG/M
3300005445\|Ga0070708_100005534	All Organisms → cellular organisms → Bacteria	10011	Open in IMG/M
3300005445\|Ga0070708_100270606	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300005447\|Ga0066689_10011808	All Organisms → cellular organisms → Bacteria → Proteobacteria	4001	Open in IMG/M
3300005450\|Ga0066682_10424104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	849	Open in IMG/M
3300005454\|Ga0066687_10026878	All Organisms → cellular organisms → Bacteria	2493	Open in IMG/M
3300005467\|Ga0070706_102071555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300005518\|Ga0070699_100022906	All Organisms → cellular organisms → Bacteria	5381	Open in IMG/M
3300005518\|Ga0070699_100300121	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300005536\|Ga0070697_100175616	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300005540\|Ga0066697_10681539	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005552\|Ga0066701_10047088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2348	Open in IMG/M
3300005555\|Ga0066692_10012416	All Organisms → cellular organisms → Bacteria	4087	Open in IMG/M
3300005555\|Ga0066692_10451461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300005556\|Ga0066707_10049855	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300005559\|Ga0066700_10197859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1387	Open in IMG/M
3300005566\|Ga0066693_10079614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1151	Open in IMG/M
3300005568\|Ga0066703_10511475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300005574\|Ga0066694_10020993	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300005574\|Ga0066694_10513469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	559	Open in IMG/M
3300005575\|Ga0066702_10919904	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006031\|Ga0066651_10112336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1387	Open in IMG/M
3300006032\|Ga0066696_10095140	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300006032\|Ga0066696_10834702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300006049\|Ga0075417_10094551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1349	Open in IMG/M
3300006794\|Ga0066658_10322910	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300006796\|Ga0066665_10152762	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300006852\|Ga0075433_10052521	All Organisms → cellular organisms → Bacteria → Proteobacteria	3551	Open in IMG/M
3300006854\|Ga0075425_100154512	All Organisms → cellular organisms → Bacteria → Proteobacteria	2630	Open in IMG/M
3300006854\|Ga0075425_101681224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	714	Open in IMG/M
3300006854\|Ga0075425_102909530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	525	Open in IMG/M
3300006871\|Ga0075434_100177761	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300006903\|Ga0075426_11131476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	593	Open in IMG/M
3300007258\|Ga0099793_10064890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1639	Open in IMG/M
3300007788\|Ga0099795_10057484	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300009012\|Ga0066710_100035317	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus coralloides	5922	Open in IMG/M
3300009012\|Ga0066710_103993765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	552	Open in IMG/M
3300009088\|Ga0099830_10073094	All Organisms → cellular organisms → Bacteria	2493	Open in IMG/M
3300009137\|Ga0066709_100918312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1277	Open in IMG/M
3300009137\|Ga0066709_104469618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	511	Open in IMG/M
3300009143\|Ga0099792_10104914	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300009143\|Ga0099792_10223109	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1083	Open in IMG/M
3300009143\|Ga0099792_10323584	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	922	Open in IMG/M
3300009143\|Ga0099792_10597596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	703	Open in IMG/M
3300009147\|Ga0114129_10390562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1836	Open in IMG/M
3300010320\|Ga0134109_10413246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	542	Open in IMG/M
3300010321\|Ga0134067_10269738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	647	Open in IMG/M
3300012205\|Ga0137362_10039382	All Organisms → cellular organisms → Bacteria → Proteobacteria	3799	Open in IMG/M
3300012361\|Ga0137360_11318955	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300012362\|Ga0137361_10153262	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300012362\|Ga0137361_11043195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	738	Open in IMG/M
3300012683\|Ga0137398_10004895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6213	Open in IMG/M
3300012918\|Ga0137396_10311681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	1164	Open in IMG/M
3300012918\|Ga0137396_10803555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300012924\|Ga0137413_11257867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	592	Open in IMG/M
3300012925\|Ga0137419_10215172	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300012930\|Ga0137407_10053015	All Organisms → cellular organisms → Bacteria	3305	Open in IMG/M
3300012948\|Ga0126375_10001965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6928	Open in IMG/M
3300018027\|Ga0184605_10002506	All Organisms → cellular organisms → Bacteria → Proteobacteria	6211	Open in IMG/M
3300018433\|Ga0066667_10028703	All Organisms → cellular organisms → Bacteria	3093	Open in IMG/M
3300018468\|Ga0066662_10387809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1221	Open in IMG/M
3300018468\|Ga0066662_10416753	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300018482\|Ga0066669_10153546	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300020199\|Ga0179592_10345289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	656	Open in IMG/M
3300021086\|Ga0179596_10450724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300021478\|Ga0210402_11055327	Not Available	740	Open in IMG/M
3300021860\|Ga0213851_1188147	All Organisms → cellular organisms → Bacteria	7553	Open in IMG/M
3300025910\|Ga0207684_10210913	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300025910\|Ga0207684_11085652	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300026296\|Ga0209235_1019204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3675	Open in IMG/M
3300026296\|Ga0209235_1033013	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300026297\|Ga0209237_1136515	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300026298\|Ga0209236_1101275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1295	Open in IMG/M
3300026300\|Ga0209027_1058993	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300026301\|Ga0209238_1186472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
3300026309\|Ga0209055_1058615	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300026309\|Ga0209055_1234964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300026315\|Ga0209686_1011612	All Organisms → cellular organisms → Bacteria → Proteobacteria	3652	Open in IMG/M
3300026322\|Ga0209687_1012358	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300026328\|Ga0209802_1041700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	2331	Open in IMG/M
3300026330\|Ga0209473_1137760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1001	Open in IMG/M
3300026524\|Ga0209690_1005828	All Organisms → cellular organisms → Bacteria → Proteobacteria	6881	Open in IMG/M
3300026532\|Ga0209160_1107482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	1399	Open in IMG/M
3300026538\|Ga0209056_10272158	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300026542\|Ga0209805_1045000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2217	Open in IMG/M
3300026550\|Ga0209474_10244397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1111	Open in IMG/M
3300026552\|Ga0209577_10031158	All Organisms → cellular organisms → Bacteria	4639	Open in IMG/M
3300026552\|Ga0209577_10043453	All Organisms → cellular organisms → Bacteria	3833	Open in IMG/M
3300026557\|Ga0179587_10028022	All Organisms → cellular organisms → Bacteria	3102	Open in IMG/M
3300026557\|Ga0179587_10201788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1260	Open in IMG/M
3300027748\|Ga0209689_1000919	All Organisms → cellular organisms → Bacteria	21448	Open in IMG/M
3300027873\|Ga0209814_10347065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	649	Open in IMG/M
3300027903\|Ga0209488_10007130	All Organisms → cellular organisms → Bacteria	8406	Open in IMG/M
3300027903\|Ga0209488_10374156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1057	Open in IMG/M
3300027903\|Ga0209488_10597205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4	801	Open in IMG/M
3300027903\|Ga0209488_10648471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	761	Open in IMG/M
3300028536\|Ga0137415_10142412	All Organisms → cellular organisms → Bacteria	2236	Open in IMG/M
3300031720\|Ga0307469_10326628	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300031820\|Ga0307473_10084136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1641	Open in IMG/M
3300031820\|Ga0307473_10404703	Not Available	895	Open in IMG/M
3300031820\|Ga0307473_10842310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300032180\|Ga0307471_101025004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	992	Open in IMG/M
3300032180\|Ga0307471_102344192	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300032205\|Ga0307472_100042720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2754	Open in IMG/M
3300032205\|Ga0307472_100158152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.74%
Host-Associated	Host-Associated	7.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.13%
Plants	Host-Associated → Plants	7.26%
Aquatic	Environmental → Aquatic	1.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.26%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.84%
Loam	Environmental → Terrestrial → Soil → Loam	11.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	47.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.61%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100727332	3300002558	Grasslands Soil	VKPLLLSGLLFCGCAGSLMRPRPALIFEDSSAALEWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVVKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
JGI25383J37093_100057231	3300002560	Grasslands Soil	MRPRPALIFEDSSAALEWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADV
JGI25383J37093_100103241	3300002560	Grasslands Soil	WRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVVKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
JGI25382J37095_100659022	3300002562	Grasslands Soil	MRPRPALIFEDSSAALEWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
JGI25382J43887_103644481	3300002908	Grasslands Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
JGI25386J43895_101916671	3300002912	Grasslands Soil	RPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVXKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
soilH1_102305212	3300003321	Sugarcane Root And Bulk Soil	MLRPRTVGLIFEDSSAPLEWRADIGSAPQEVRGESCRNAIGLPLFLWGGWDLVGWAESGYRDAVAKAQAQAPGKRLSDIRADVRFVNVLVWRQECLQITAAAR*
soilH2_101098161	3300003324	Sugarcane Root And Bulk Soil	RPRTVGLIFEDSSAPLEWRADIGSAPQEVRGESCRNAIGLPLFLWGGWDLVGWAESGYRDAVAKAQAQAPGKRLSDIRADVRFVNVLVWRQECLQITAAAR*
Ga0066677_100173663	3300005171	Soil	VKALLMGLLFCGCAGSVIRPRPVALVFEDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINILVWRKECLEVTAAAR*
Ga0066680_101233083	3300005174	Soil	VHPRHREGRPVKALLVGLLFCGCAGSVIRPRPVALVFEDSSAGLEWRADTEGAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINILVWRKECLEVTAAAR*
Ga0066680_102491492	3300005174	Soil	WRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
Ga0066673_101717953	3300005175	Soil	VRALLPLALLFCGCAGSVMRPRPALVFEDSSAGLEWRADTESAPREVHGEACRNAFGLPLFLFGGWDIAGWGDAGYRDAVAQAQAQAPGSTLSDVRADVRFINVLVFRRECLEVTASAR*
Ga0066673_102299882	3300005175	Soil	LRQGVHPRHRESRPVKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRADTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDLRFVNVLVWHQDCLEVTAAAR*
Ga0066673_102396611	3300005175	Soil	RQGVHSRHGEGRPVKALLICGLLSCGCAGSMIRPHRVAVVFEDSSTALEWRADMGSARREVHGESCRNAIGLPLFLWGGRNLVGWADAGYRDAVAEAQAQAPGSTLSDIRADVRFVNILIWRQECLEVTAAAR*
Ga0066679_100838403	3300005176	Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINIIVWRQECLVVTAAAR*
Ga0066690_101997272	3300005177	Soil	VRLLLLSGLLFCGCAGSMMRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
Ga0066688_100151095	3300005178	Soil	VKALLMGLLFCGCAGSVIRPRPVALVFEDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRNAVAKAQAQAPGSTLSDVRADVRFINILVWRKECLEVTAAAR*
Ga0066684_100118882	3300005179	Soil	VKALLICGLLSCGCAGSMIRPHRVAVVFEDSSTALEWRADMGSARREVHGESCRNAIGLPLFLWGGRNLVGWADAGYRDAVAKAQAQAPGSTLSDIRADVRFVNILIWRQECLEVTAAAR
Ga0066684_100128293	3300005179	Soil	VKGLLLCGLLFSGCAGSVIRPHRVAIVFEDSSAPLEWRADTGSAPREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDLRFVNVLVWHQDCLEVTAAAR
Ga0070708_1000055346	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKALLVSGLLFCGCAGSVIRPRPAIVFEDSSAGLEWRADIGAGQREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGSTLTDIRADVRFINVLVWRQECLEVTAAAR*
Ga0070708_1002706062	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMRPRPVALMFEDSSAALDWRADTGAAPREVHGESCRNALGLPLFLWGGPDLAGWGDAGYRAAVAKAQSQAPGSTLSDVRADVHFINILVWRQECLVVTASAR*
Ga0066689_100118085	3300005447	Soil	EDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINILVWRKECLEVTAAAR*
Ga0066682_104241042	3300005450	Soil	VKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRADTGSAPREVHGESCRSAIGLPLFHWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDLRFVNVLVWHQDCLEVTAAAR
Ga0066687_100268781	3300005454	Soil	MRPRPALIFEDSSAALQWRADTGSARREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINI
Ga0070706_1000887994	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GLEWRADIGAGQREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGSTLTDIRADVRFINVLVWRQECLEVTAAAR*
Ga0070706_1020715552	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VKGLLLSGLLFSGCAGSAIRPHGPAIVLEDSSAPLEWRVDTGSAPREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGSTLSDIRADVRFINVLV
Ga0070699_1000229064	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VKGLLLCGLLFSGCAGSAIRPHGPAIVLEDSSAPLEWRVDTGSAPREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRILSDVRADVRFVNVLIWRQECLEVTAAAR
Ga0070699_1003001211	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EGGPVKALLVSGLLFCGCAGSVIRPRPAIVFEDSSAGLEWRADIGAGQREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGSTLTDIRADVRFINVLVWRQECLEVTAAAR*
Ga0070697_1001756161	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	CAGSAIRPHGPAIVLEDSSAPLEWRVDTGSAPREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRILSDVRADVRFVNVLIWRQECLEVTAAAR*
Ga0066697_106815391	3300005540	Soil	VALVFEDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINILVWRKECLEVTAAAR*
Ga0066701_100470883	3300005552	Soil	VKALLVGLLFCGCAGSVIRPRPVALVFEDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFMNILVWRKECLEVTAAAR*
Ga0066692_100124163	3300005555	Soil	MMRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVVKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
Ga0066692_104514612	3300005555	Soil	VRPLLLSALILCGCAGSMLRPLPVALIFEDSSAPLEWRADTGSAPREVHGESCRNAVGLPLFLWGGYDLAGWGDAGYRDAVAKAQSQAPGTTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0066707_100498553	3300005556	Soil	EWRADTGSAPREVHGESCRNAVGLPLFLWGGYDLAGWGDAGYRDAVAKAQSQAPGSTLSDVRADLHFINILVWRQECLVVTAAAR*
Ga0066700_101978592	3300005559	Soil	VKAVLFCALLLCACAGTVIRPHRVAIVFEDSSAPLEWRADTESAPREVHGESCRNAFGLPLFLWGGWDVAGWGEAGYRDAVAQAQAQAPGSVLSDVRADVRFVNVLVWRKECLEVTAVAR
Ga0066693_100796142	3300005566	Soil	VKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRADTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGSTLSDIRADVRFVNILIWRQECLEVTAAAR
Ga0066703_105114751	3300005568	Soil	VRLLLLSGLLFCGCAGSMMRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINIIVWRQECLVVTAAAR*
Ga0066694_100209931	3300005574	Soil	VFENSSAALEWRADTGTAPREVHGESCRNAIGLPLFFWGGQDLAGWGDAGYRDAVAKAQSQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
Ga0066694_105134692	3300005574	Soil	VKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRADTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDLRFVNVLVWHQDCLEVTAA
Ga0066702_109199041	3300005575	Soil	ALVFEDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINILVWRKECLEVTAAAR*
Ga0066651_101123362	3300006031	Soil	VKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRADTGSALREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGSTLSVVRADVRFVNLLVWRQECLEVTAAAR
Ga0066696_100951404	3300006032	Soil	VKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRADTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAEAQAQAPGRTLSDVRVDLRFVNVLVWHQDCLEVTAAAR
Ga0066696_108347021	3300006032	Soil	MRPRPALVFEDSSAGLEWRADTESAPREVHGEACRNAFGLPLFLFGGWDIAGWGDAGYRDAVAQAQAQAPGSTLSDVRADVRFINV
Ga0075417_100945511	3300006049	Populus Rhizosphere	MMRPRQIGLVFEDSSAPFEWRADTGAAPREVHGESCRNAVGLPLFLWGGQDLVGWGESGYRDAVAQAQAQAPGSTLSDVRADVRFVNILIFRRECLEVTASAR*
Ga0066658_103229102	3300006794	Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYHDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
Ga0066665_101527622	3300006796	Soil	MMRPPRVALVFEDSSAALDWRVDTGSAPREVHGESCRNAVGLPLFLWGGYDLAGWGDAGYRDAVAKAQSQAPGSTLSDVRADLHFINILVWRQECLVVTAAAR*
Ga0075433_100525215	3300006852	Populus Rhizosphere	MMRPRQIGLVFEDSSVPFEWRADTGAAPREVHGESCRNAVGLPLFLWGGQDLVGWGESGYRDAVAQAQAQAPGSTLSDVRADVRFVNILIFRRECLEVTASAR*
Ga0075425_1001545123	3300006854	Populus Rhizosphere	VKALICGLLVCGCAGSMMRPRQIGLVFEDSSAPFEWRADTGAAPREVHGESCRNAVGLPLFLWGGQDLVGWGESGYRDAVAQAQAQAPGSTLSDVRADVRFVNILIFRRECLEVTASAR*
Ga0075425_1016812242	3300006854	Populus Rhizosphere	LVFDDSSAPLAWRADFGSAPREVHGESCRYAIGLPLFLWGGWDLVGWANDGYREAVAKAQAQAPGSTLSDVRADIRFVNVLIWRKECLEVTAAAR*
Ga0075425_1029095301	3300006854	Populus Rhizosphere	VRTLLFCALLLSGCAGSVMRPYRVALVFEDSSAPLEWRADTGSAPREVHGEACRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRADIRFVNVLVWRQECLEVT
Ga0075434_1001777613	3300006871	Populus Rhizosphere	VKALICGLLVCGCAGSMMRPRQIGLVFEDSSVPFEWRADTGAAPREVHGESCRNAVGLPLFLWGGQDLVGWGESGYRDAVAQAQAQAPGSTLSDVRADVRFVNILIFRRECLEVTASAR*
Ga0075426_111314761	3300006903	Populus Rhizosphere	VKGLLLCGLLFSGCAGSAIRPHGPAIVLEDSSAPLEWRVDTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRILSDVRADVRFVNVLIWRQECLEVTAAAR
Ga0099793_100648902	3300007258	Vadose Zone Soil	MMRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
Ga0099795_100574842	3300007788	Vadose Zone Soil	MMRARPVGLVFEDSSAALEWRADTGAAPREVFGESCRNAIGFPLFFWGGQDLVGWGDAGYRDAVAKAQAQAPGATLSDVRADVRFVNILIWRQECLQVTAAAR*
Ga0066710_1000353172	3300009012	Grasslands Soil	VRLLLLCGLILCGCAGSVMRPPRVALVFEDSSAALDWRVDTGSAPREVHGESCRNAVGLPLFLWGGYDLAGWGDAGYRDAVAKAQSQAPGSTLSDVRADLHFINILVWRQECLVVTAAAR
Ga0066710_1039937652	3300009012	Grasslands Soil	VKALLVSGLLFCGCAGRMIRPLPVALVFEDSSAPLEWRADTETAPREVHGESCRSAIGLPLFLWGGYDLVGWSDAGYRDAVAKAQAQAPGTTLSDVRADMRFINVLVWRRECLEVTAAAR
Ga0099830_100730943	3300009088	Vadose Zone Soil	VGCSKQSRADIRSAPREVHGESSRNALGLPLFIVGGPDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
Ga0066709_1009183122	3300009137	Grasslands Soil	VKALLLSGLLVFCGCAGSMMRPRLVGIIFEDSSAALEWRADTGPAPREVHGESCRNAIGLPLFFWGGQDLVGWADAGYRDAVAKAQAQAPGSTLSDIRADARFFNVLVWRQECLEVTAAAR*
Ga0066709_1044696181	3300009137	Grasslands Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVV
Ga0099792_101049141	3300009143	Vadose Zone Soil	RQGVHPRHREGRPVKALLLSGLLFCGCAGAMMRARPVGLVFEDSSAALEWRADTGAAPREVFGESCRNAIGFPLFFWGGQDLVGWGDAGYRDAVAKAQAQAPGATLSDVRADVRFVNILIWRQECLQVTAAAR*
Ga0099792_102231092	3300009143	Vadose Zone Soil	MIRPRGVAIVFEDSSAPLEWRADTGSAPREVNGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRADVRFINVLVWRQECLEVTAAAR*
Ga0099792_103235842	3300009143	Vadose Zone Soil	MIRPRPVALVFEDSSAALEWRADTGSAPREVQGEACRNAFGLPLFLWGGPDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRKECVVVTAAAR*
Ga0099792_105975962	3300009143	Vadose Zone Soil	VIRPRGVAIVFEDSSGPLEWRADAGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDVRFVNVLVWRQDCLEVTAAAR*
Ga0114129_103905621	3300009147	Populus Rhizosphere	MIRPRPVALVFEDSSAALEWRADTGAAPREVHGESCRTAIGLPLFLWGGQDLVGWGDAGYRDAVAQAQAQAPGTTLSDIRADVRFINVLIWRRECLEVTAAAR*
Ga0134109_104132461	3300010320	Grasslands Soil	VKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRTDTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSNVRVDLRFVNVLVWHQDCLR*
Ga0134067_102697381	3300010321	Grasslands Soil	RHGEGSPVKGLLLCGLLFSGCAGSVIRPHRVAIVFEDSSAPLEWRADTGSAPREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDLRFVNVLVWHQDCLEVTAAAR*
Ga0137362_100393822	3300012205	Vadose Zone Soil	VKPLLLSGLLFCGCAGSLMRPRPALIFEDSSAALEWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVVKAQAQAPGSTLSDVHADVHFINILVWRQECLVVTAAAR*
Ga0137360_113189552	3300012361	Vadose Zone Soil	RPVALVFEDSSAALEWRADTGAAPREVHGESCRNAIGLPLFLWGGPDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINVLVWRQECLEVTAAAR*
Ga0137361_101532622	3300012362	Vadose Zone Soil	VKALLFSGLLFCGCAGALMRPRPVAIVFEESSAALEWRADTGAGPREVHGESCRNAIGLPLFLWGGPDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINVLVWRQECLEVTAAAR
Ga0137361_110431952	3300012362	Vadose Zone Soil	MMRPRPALIFEDSSAALEWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR*
Ga0137398_100048954	3300012683	Vadose Zone Soil	VKALLFSGLLFCGCAGSVIRPRGVAIVFEDSSGPLEWRADAGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDVRFVNVLVWRQDCLEVTAAAR
Ga0137396_103116812	3300012918	Vadose Zone Soil	MIRPRPVALVFEDSSAALEWRADTGSAPREVQGEACRNAFGLPLFLWCGPDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRKECVVVTAAAR*
Ga0137396_108035552	3300012918	Vadose Zone Soil	MIRPRPVALVFEDSSAALEWRADTGAAPREVFGESCRNAIGFPLFFWGGQDLVGWGDVGYRDAVAKAQSQAPGATLSDVRADVRFVNIL
Ga0137413_112578671	3300012924	Vadose Zone Soil	SVIRPRGVAIVFEDSSGPLEWRADAGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDVRFVNVLVWRQDCLEVTAAAR*
Ga0137419_102151723	3300012925	Vadose Zone Soil	MIRPRPVALVFEDSSAALEWRADTGAAPREVYGESCRNAIGFPLFFWGGQDLVGWGDAGYRDAVAKAQSQAPGATLSDVRADVRFVNILIWRQECLQVTAAAR*
Ga0137407_100530155	3300012930	Vadose Zone Soil	MLRPRPVALVFEDSSAALDWRADTGSAPREVHGESCRNALGLPLFLWGGPDLAGWGDAGYRDAVAKAQSQAPGSTLSDVRVDVHFINILVWRQECLVVTAAAR*
Ga0126375_100019656	3300012948	Tropical Forest Soil	VKALLFCALFASGCAGAALIRPRPALVFDDSSAPLAWRADTGSAPREVHGEACRYAVGLPLFLWGGWDLVGWAHDGYREAVAQAQAQAPGSTLSDVRADIRFVNVLVFRKECLEVTAAAR
Ga0184605_100025066	3300018027	Groundwater Sediment	MRPLPVALIFEDSSAPLEWRADTGSAPREVQGESCRNALGLPLFLWGGHDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0066667_100287031	3300018433	Grasslands Soil	LCGCAGSVMRPPGVALVFEDSSAALDWRVDTGSAPREVHGESCRNAVGLPLFLWGGYDLAGWGDAGYRDAVAKAQSQAPGSTLSDVRADLHFINILVWRQECLVVTAAAR
Ga0066662_103878092	3300018468	Grasslands Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0066662_104167532	3300018468	Grasslands Soil	VKALLMGLLFCGCAGSVIRPRPVALVFEDSSAGLEWRADTEAARREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINILVWRKECLEVTAAAR
Ga0066669_101535463	3300018482	Grasslands Soil	VKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRADTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDLRFVNVLVWHQDCLEVTAAAR
Ga0179592_103452891	3300020199	Vadose Zone Soil	LPLRQGLHPRHREGRPVKALLCCGLLLAGCAAPVMRPYRIALAFEDSSAPLAWRADTRSAPIEVHGESCRNAIGLPLFLFGGFDLVGWADAGYREAVAKAQAQAPGSTLSDVRADVRFVNVLIWRQECLEVTASAR
Ga0179596_104507242	3300021086	Vadose Zone Soil	VKALLFCGLLFSGCAGSVIRPRGVAIVFEDSSGPLEWRADTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDVRFVNVLVWRQDCLEVTAAAR
Ga0210402_110553271	3300021478	Soil	KVLLFCALFVSGCAGAVIRPRPALVFDDSTAPIAWRADTGWEPHEVHGESCRNAIGLPLFFWGGWDLVGWAYDGYREAVAKAQAQAPGSTLSDVRADLHFINILIWRQECLEVTAAAR
Ga0213851_11881474	3300021860	Watersheds	MRPRPALIFENSSAGRDWRADSRSAPREVQGESCRNAVGLPLFAWGGTDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRVDLHLLNILVFRQECLVVTAAAR
Ga0207684_102109132	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	HPRHGEGGPVKALLVSGLLFCGCAGSVIRPRPAIVFEDSSAGLEWRADIGAGQREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGSTLTDIRADVRFINVLVWRQECLEVTAAAR
Ga0207684_110856521	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKGLLLSGLLFSGCAGSAIRPHGPAIVLEDSSAPLELRVDTGSAPREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRILSDVRADVRFVNVLIWRQECLEVTAAAR
Ga0209235_10192042	3300026296	Grasslands Soil	MRPRPALIFEDSSAALEWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVVKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0209235_10330131	3300026296	Grasslands Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINI
Ga0209237_11365153	3300026297	Grasslands Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVVKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0209236_11012752	3300026298	Grasslands Soil	VKPLLLSGLLFCGCAGSLMRPRPALIFEDSSAALEWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVVKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0209027_10589932	3300026300	Grasslands Soil	VKGLLLCGLLFSGCAGSVIRPHRVAIVFEDSSAPLEWRADTGSAPREVHGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINIIVWRQECLVVTAAAR
Ga0209238_11864721	3300026301	Grasslands Soil	VRLLLLSGLLFCGCAGSMMRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINIIVWRQECLVVTAAAR
Ga0209055_10586154	3300026309	Soil	VRLLLLSGLLFCGCAGSMMRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0209055_12349642	3300026309	Soil	VKALLMGLLFCGCAGSVIRPRPVALVFEDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVR
Ga0209686_10116126	3300026315	Soil	PRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINIIVWRQECLVVTAAAR
Ga0209687_10123581	3300026322	Soil	LLLLSGLLFCGCAGSMMRPRPALIFEDSSAALQWRADTGSARREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0209802_10417003	3300026328	Soil	VKALLMGLLFCGCAGSVIRPRPVALVFEDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFINILVWRKECLEVTAAAR
Ga0209473_11377603	3300026330	Soil	VKALLICGLLSCGCAGSMIRPHRVAVVFEDSSTALEWRADMGSARREVHGESCRNAIGLPLFLWGGRNLVGWADAGYRDAVAKAQAQAPGSTLSDIRADVRFVNI
Ga0209690_10058284	3300026524	Soil	VKALLVGLLFCGCAGSVIRPRPVALVFEDSSAGLEWRADTEAAPREVHGESCRSAIGLPLFLWGGQDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVRFMNILVWRKECLEVTAAAR
Ga0209160_11074821	3300026532	Soil	RLLLLSGLLFCGCAGSMMRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0209056_102721583	3300026538	Soil	VRLLLLCGLILCGCAGSMMRPPRVALVFEDSSAALDWRVDTGSAPREVHGESCRNAVGLPLFLWGGYDLAGWGDAGYRDAVAKAQSQAPGSTLSDVRADLHF
Ga0209805_10450003	3300026542	Soil	MRPRPALIFEDSSAALQWRADTGSARREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRQECLVVTAAAR
Ga0209474_102443971	3300026550	Soil	VKALLVYALLFCGCAGSVIRPRGVAIVFEDSSGPFEWRADTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAEAQAQAPGRTLSDVRVDLRFVNVLVWHQDCLE
Ga0209577_100311586	3300026552	Soil	MIRPRQVAIVFEDSSAGLEWRADTEAAPREVHGESCRNAIGLPLFVWGGQDLVGWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINVLVWRQECLEVTAAAR
Ga0209577_100434533	3300026552	Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQATGSTLSDVRADVHFINIIVWRQECLVVTAAAR
Ga0179587_100280221	3300026557	Vadose Zone Soil	MIRSRGVAIVFEESSAPLEWRADTGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDVRFVNVLVWRQDCLEVTAAAR
Ga0179587_102017883	3300026557	Vadose Zone Soil	VKALLCCGLLLAGCAAPVMRPYRIALAFEDSSAPLAWRADTRSAPIEVHGESCRNAIGLPLFLFGGFDLVGWADAGYREAVAKAQAQAPGSTLSDVRADVRFVNVLIWRQECLEVTASAR
Ga0209689_100091911	3300027748	Soil	MRPRPALIFEDSSAALQWRADTGSAPREVHGESCRNAVGLPLFLWGGWDLGAWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINIIVWRQECLVVTAAAR
Ga0209814_103470651	3300027873	Populus Rhizosphere	VRQGVHPCHREGRPVKALICGLLMCGCAGSMMRPRQIGLVFEDSSAPFEWRADTGAAPREVHGESCRNAVGLPLFLWGGQDLVGWGESGYRDAVAQAQAQAPGSTLSDVRADVRFVNILIFRRECLEVTASAR
Ga0209488_100071307	3300027903	Vadose Zone Soil	VKALLFCGLLFCGCAGSVIRPRGVAIVFEDSSGPLEWRADAGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRVDVRFVNVLVWRQDCLEVTAAAR
Ga0209488_103741562	3300027903	Vadose Zone Soil	MRPYRIALAFEDSSAPLAWRADTRSAPIEVHGESCRSAIGLPLFLWGGADLVGWADAGYREAVAKAQAQAPGSTLSDVRADVRFVNVLIWRQECLEVTASAR
Ga0209488_105972051	3300027903	Vadose Zone Soil	VKALLFCGLLFCGCAASMIRPRGVAIVFEDSSAPLEWRADTGSAPREVNGESCRNAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRADVRFINVLVWRQE
Ga0209488_106484712	3300027903	Vadose Zone Soil	MIRPRPVALVFEDSSAALEWRADTGSAPREVQGEACRNAFGLPLFLWGGPDLAGWGDAGYRDAVAKAQAQAPGSTLSDVRADVHFINILVWRKECVVVTAAAR
Ga0137415_101424122	3300028536	Vadose Zone Soil	VKALLFCGLLFCGCAGSVIRPRGVAIVFEDSSGPLEWRADAGSAPREVHGESCRSAIGLPLFLWGGWDLGGWGDAGYRDAVAKAQAQAPGRTLSDVRADVRFVNVLVWRKECLEVTAAAR
Ga0307469_103266283	3300031720	Hardwood Forest Soil	VKVLLFCALFVSGCAGAVIRPRPALVFDDSTAPIAWRADTGWEPHEVHGESCRNAIGLPLFFWGGWDLVGWAYDGYREAVAKAQAQAPGSTLSDVRADLHFINVLIWRQECLEVTAAAR
Ga0307473_100841362	3300031820	Hardwood Forest Soil	MIRPRPPALVFEDSSAALDWRADTGSAPREVHGESCRNAVGLPLFLWGGPDLAGWGDAGYRDAVAKAQSQAPGSTLSDVRADVHFINILVWRQECVVVTAAAR
Ga0307473_104047032	3300031820	Hardwood Forest Soil	VKALLFCALLVSGRAGAVIRPRPALVFDDSTAPIAWRADTGWEPHEVHGESCRNAIGLPLFLWGGWDLVGWAHDGYREAVAKAQAQAPGSTLSDVRADLHFINILVWRQECLEVTAAAR
Ga0307473_108423102	3300031820	Hardwood Forest Soil	VKALLFCALFVSGCAGAVIRPRPALVFDDSSAPLAWRADFGSAPREVHGESCHYAIGLPLFLWGGWDLVGWANDGYREAVAKAQAQAPGSTLSDVRADI
Ga0307471_1010250042	3300032180	Hardwood Forest Soil	VKALLLSGLLLCGCAGSVIRPQPVALVFEDGSAALEWRADTGGSPREVHGESCRNAVGLPLFLWGGWDLVGWGEAGYRDAVAKAQAQAPGSTLSDVRADVRFINVLVCRKECLQVTAAVR
Ga0307471_1023441922	3300032180	Hardwood Forest Soil	VKALLFCALLVSGCAGAVIRPRPALVFDDSTAPIAWRADTGWEPHEVHGESCRNAIGLPLFWGGWDLVGWAHDGYREAVAKAQAQAPGSTLSDVRADLHFINVLIWRQECLEVTAAAR
Ga0307472_1000427202	3300032205	Hardwood Forest Soil	VKALLFCALFVSGCAGAVIRPRPALVFDDSSAPLAWRADFGSAPREVHGESCHYAIGLPLFLWGGWDLVGWANDGYREAVAKAQAQAPGSTLSDVRADIRFVNVLIWRKECLEVTAAAR
Ga0307472_1001581522	3300032205	Hardwood Forest Soil	VKALLFCALLVSGCAGAVIRPRPALVFDDSTAPIAWRADTGWEPHEVHGESCRNAIGLPLFLWGGWDLVGWAHDGYREAVAKAQAQAPGSTLSDVRADLHFINILVWRQECLEVTAAAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068665

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences