Metagenome / Metatranscriptome Family F068617

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068617
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	50 residues
Representative Sequence	NDASAQVKKIAEEDLPALNKKMNDAGIPHIVPAPPQPRGGRGGEEESDQ
Number of Associated Samples	97
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.61 %
% of genes near scaffold ends (potentially truncated)	97.58 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.323 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (45.968 % of family members)
Environment Ontology (ENVO)	Unclassified (46.774 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.194 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.87% β-sheet: 0.00% Coil/Unstructured: 70.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07676	PD40	46.77
PF01370	Epimerase	9.68
PF16363	GDP_Man_Dehyd	4.03
PF03721	UDPG_MGDP_dh_N	0.81
PF01494	FAD_binding_3	0.81
PF11306	DUF3108	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.61
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.81
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.81
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.81
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.81
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.81
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.32 %
Unclassified	root	N/A	9.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.32 %
Unclassified	root	N/A	9.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.32 %
Unclassified	root	N/A	9.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.81 %
Unclassified	root	N/A	9.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	8.06 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.03 %
Unclassified	root	N/A	9.68 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	8.06 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.03 %
Unclassified	root	N/A	9.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8.06 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.03 %
Unclassified	root	N/A	9.68 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	8.06 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.03 %
Unclassified	root	N/A	9.68 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	8.06 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1044178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300001661\|JGI12053J15887_10201570	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300002914\|JGI25617J43924_10092966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300004139\|Ga0058897_10787413	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	629	Open in IMG/M
3300005181\|Ga0066678_10315006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300005187\|Ga0066675_11147245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300005439\|Ga0070711_100284685	All Organisms → cellular organisms → Bacteria → Acidobacteria	1309	Open in IMG/M
3300005445\|Ga0070708_100475020	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M
3300005447\|Ga0066689_10612263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300005467\|Ga0070706_101516932	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005552\|Ga0066701_10081774	Not Available	1853	Open in IMG/M
3300005568\|Ga0066703_10435009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300005598\|Ga0066706_10111768	Not Available	2003	Open in IMG/M
3300005602\|Ga0070762_11113990	Not Available	544	Open in IMG/M
3300006034\|Ga0066656_10050303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2402	Open in IMG/M
3300006800\|Ga0066660_10122875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1880	Open in IMG/M
3300009012\|Ga0066710_100015946	All Organisms → cellular organisms → Bacteria	8017	Open in IMG/M
3300009038\|Ga0099829_11774391	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300009088\|Ga0099830_10655132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300009088\|Ga0099830_10662070	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	858	Open in IMG/M
3300009088\|Ga0099830_10666469	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	855	Open in IMG/M
3300009089\|Ga0099828_11031431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300009089\|Ga0099828_11637663	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300009089\|Ga0099828_11851269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010048\|Ga0126373_10893714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300010337\|Ga0134062_10327265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300010361\|Ga0126378_10318799	Not Available	1660	Open in IMG/M
3300010362\|Ga0126377_12594613	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300011269\|Ga0137392_10278663	Not Available	1380	Open in IMG/M
3300011269\|Ga0137392_10440582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300011269\|Ga0137392_11571136	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300011270\|Ga0137391_11499859	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300011271\|Ga0137393_10844105	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	782	Open in IMG/M
3300011271\|Ga0137393_11087402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300012096\|Ga0137389_10840091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300012189\|Ga0137388_10290632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1496	Open in IMG/M
3300012189\|Ga0137388_10533250	Not Available	1091	Open in IMG/M
3300012198\|Ga0137364_10708629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300012202\|Ga0137363_10526940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300012202\|Ga0137363_10575574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300012207\|Ga0137381_10934512	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	749	Open in IMG/M
3300012209\|Ga0137379_10713942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300012209\|Ga0137379_10744040	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	886	Open in IMG/M
3300012210\|Ga0137378_11457472	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300012211\|Ga0137377_10449559	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300012211\|Ga0137377_10532121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300012211\|Ga0137377_11681445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012349\|Ga0137387_10978029	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300012351\|Ga0137386_10553984	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	828	Open in IMG/M
3300012361\|Ga0137360_10008061	All Organisms → cellular organisms → Bacteria	6590	Open in IMG/M
3300012361\|Ga0137360_10264964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1416	Open in IMG/M
3300012363\|Ga0137390_10205682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1956	Open in IMG/M
3300012582\|Ga0137358_10062513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2491	Open in IMG/M
3300012582\|Ga0137358_10084557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2138	Open in IMG/M
3300012582\|Ga0137358_10173053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1472	Open in IMG/M
3300012582\|Ga0137358_10708467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300012683\|Ga0137398_10230080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300012683\|Ga0137398_10750106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300012917\|Ga0137395_10017583	All Organisms → cellular organisms → Bacteria	4086	Open in IMG/M
3300012918\|Ga0137396_11297836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012924\|Ga0137413_10000795	All Organisms → cellular organisms → Bacteria	11339	Open in IMG/M
3300012924\|Ga0137413_10958048	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300012925\|Ga0137419_11166283	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300012927\|Ga0137416_12225337	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300012929\|Ga0137404_10295002	All Organisms → cellular organisms → Bacteria → Acidobacteria	1405	Open in IMG/M
3300012929\|Ga0137404_11420099	Not Available	641	Open in IMG/M
3300012929\|Ga0137404_11884179	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300012929\|Ga0137404_12073159	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300012930\|Ga0137407_12409860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012964\|Ga0153916_10468414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1327	Open in IMG/M
3300012971\|Ga0126369_11783295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300012972\|Ga0134077_10017580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2421	Open in IMG/M
3300012987\|Ga0164307_10630458	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300014154\|Ga0134075_10559202	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300014325\|Ga0163163_11705039	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300015053\|Ga0137405_1120320	All Organisms → cellular organisms → Bacteria	4748	Open in IMG/M
3300015054\|Ga0137420_1320073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300015242\|Ga0137412_10000428	All Organisms → cellular organisms → Bacteria	29220	Open in IMG/M
3300015242\|Ga0137412_10419475	All Organisms → cellular organisms → Bacteria → Acidobacteria	1033	Open in IMG/M
3300016294\|Ga0182041_11305415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300017659\|Ga0134083_10029149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2001	Open in IMG/M
3300017934\|Ga0187803_10337588	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	605	Open in IMG/M
3300017961\|Ga0187778_10642290	Not Available	714	Open in IMG/M
3300020580\|Ga0210403_11000567	Not Available	654	Open in IMG/M
3300020581\|Ga0210399_11521600	Not Available	518	Open in IMG/M
3300020583\|Ga0210401_11174283	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	626	Open in IMG/M
3300021168\|Ga0210406_10466949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300021171\|Ga0210405_10925882	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	661	Open in IMG/M
3300021171\|Ga0210405_11422328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300021178\|Ga0210408_10468674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300021178\|Ga0210408_10845431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300021181\|Ga0210388_10573184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300021401\|Ga0210393_10266882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1389	Open in IMG/M
3300021407\|Ga0210383_10833001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300021432\|Ga0210384_10979216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300021474\|Ga0210390_11283915	Not Available	588	Open in IMG/M
3300021479\|Ga0210410_10568677	All Organisms → cellular organisms → Bacteria → Acidobacteria	1009	Open in IMG/M
3300021560\|Ga0126371_12131451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300022531\|Ga0242660_1061023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300024246\|Ga0247680_1025972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300024330\|Ga0137417_1046498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300024331\|Ga0247668_1038933	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300026277\|Ga0209350_1101586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300026304\|Ga0209240_1197738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300026328\|Ga0209802_1031073	All Organisms → cellular organisms → Bacteria → Acidobacteria	2804	Open in IMG/M
3300026524\|Ga0209690_1051052	Not Available	1851	Open in IMG/M
3300026557\|Ga0179587_10491701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300027565\|Ga0209219_1063632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300027587\|Ga0209220_1152792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300027629\|Ga0209422_1149336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300027674\|Ga0209118_1091614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300027775\|Ga0209177_10364781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300027846\|Ga0209180_10258296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300027846\|Ga0209180_10787579	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300027846\|Ga0209180_10791635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300027853\|Ga0209274_10312558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300027855\|Ga0209693_10556091	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300031128\|Ga0170823_14623893	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300031754\|Ga0307475_10205382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1575	Open in IMG/M
3300031754\|Ga0307475_10491242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300031820\|Ga0307473_10636150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300031962\|Ga0307479_11259168	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300032174\|Ga0307470_10593121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300032180\|Ga0307471_101450833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.58%
Aquatic	Environmental → Aquatic	1.61%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.58%
Freshwater	Environmental → Aquatic → Freshwater	1.61%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.29%
Loam	Environmental → Terrestrial → Soil → Loam	10.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	45.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10441781	3300001154	Forest Soil	ASAQVKKIAEEELPALNKKMNDAGIPHIVPAPPQPRSGRGGEEEFEQ*
JGI12053J15887_102015702	3300001661	Forest Soil	MQVKKIAEEELPALNKKMNDAGIPHIVPAPPQPRGGRGG
JGI25617J43924_100929661	3300002914	Grasslands Soil	SAQVKKLAEEDLPALNKKMNDAGIPHIVPAPPQARSGRDGEEESDR*
Ga0058897_107874131	3300004139	Forest Soil	KIAEEELPGLNKKMNDAGIPHIVPATPQSRGGRGGEEGSER*
Ga0066678_103150062	3300005181	Soil	ASAQVKKIAEEDLPALNKKMNDAGIPHIVPAPPQPRGGRGGEEESDQ*
Ga0066675_111472451	3300005187	Soil	NDALAQAKKIAEEELPALNKKMNDAGIPHIVPAPPQPRGGRGGQEEWEP*
Ga0070711_1002846851	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ADASAQVKKISDEDLPALNKKMNDAGIPHIVPTPPSSPGSRGGSDDDEDLER*
Ga0070708_1004750202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KKIVDEDLAALNKKMNDAGIPHIVPAPAPAPAAPRGAGGNDDDDDDR*
Ga0066689_106122631	3300005447	Soil	NDASAQVKKIAEEDLPALNKKMNDAGIPHIVPAPPQPRGGRGGEEESDQ*
Ga0070706_1015169322	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SAQVKKIVDEDLAALNKKMNEAGIPHIVAAPPAPRGNGGNTEDDNGGR*
Ga0066701_100817742	3300005552	Soil	AAVKNISAVELPALNKKMNDAGIPHIVPAPQPRGERGGEVESER*
Ga0066703_104350092	3300005568	Soil	MTPLVSEASAQVKKLAEEDLPALNKKMNEAGIPHIVPAAQASRGGQGDEEEER*
Ga0066706_101117681	3300005598	Soil	VSEASAQVKKIVDEDLAALNKKMNDAGIPHIVPAPPAPRGAGGNDDDDDR*
Ga0070762_111139902	3300005602	Soil	ASAQVKKIAEEDLPALNKKMNDAGIPHIVPAPPQARPGRGGEADDDEF*
Ga0066656_100503031	3300006034	Soil	SGQVKKIADEELPALNKKMNEAGIPHIVPAPPQPRGGRGGEAYFEQ*
Ga0066660_101228752	3300006800	Soil	DASAQVKKIADEELPALNKKMNDAGIPHIVPEPPPPRAGRGGQGELEQ*
Ga0066710_1000159467	3300009012	Grasslands Soil	DASAAVKNMSAVELPALNKKMNDAGIPHIVPAPQPRGERGGEVESER
Ga0099829_117743911	3300009038	Vadose Zone Soil	TPLVSDASAQVKKITEEDLAGLNKKMNEAGIPHIVPAPPAPRSGGGDEEDDR*
Ga0099830_106551321	3300009088	Vadose Zone Soil	LTPLVNDASAQVKKIAEEELPALNKKMNDAGIPHIVPAPPQPRGGRGGKTESEQ*
Ga0099830_106620701	3300009088	Vadose Zone Soil	KIADEELPALNKKMNEAGIPHIVPAPPQPRGGRGGEAYLEQ*
Ga0099830_106664691	3300009088	Vadose Zone Soil	KIADEELPALNKKMNEAGIPHIVPAPPQPRGGRGVEAYFEQ*
Ga0099828_110314311	3300009089	Vadose Zone Soil	AELTPLVNDASTQVKKIAEEELPALNKKMNDAGIPHIVPAPPQPRGGRGGEEESEQ*
Ga0099828_116376631	3300009089	Vadose Zone Soil	PLVNDTSGQVKKIADEELPALNKKMNEAGIPHIVLAPPQPRGGRGGEAYFEQ*
Ga0099828_118512692	3300009089	Vadose Zone Soil	TPLVNDASGQVKKVADEELPALNKKMNDAGIPHIVPAPAQPRGGRGGEEESEL*
Ga0126373_108937141	3300010048	Tropical Forest Soil	EASAAVKSVTDDLAALNKKMNDAGIPHIVPAPPRPRGPGGDGDADESDRQSALGNF*
Ga0134062_103272652	3300010337	Grasslands Soil	AELTPLVNDALAQAKKIAEEELPALNKKMNDAGIPHIVPAPPEPRGGRGGQQEWEP*
Ga0126378_103187992	3300010361	Tropical Forest Soil	VKKISEVELAGLNKKMNDAGIPHIVPAPPRPRGGPGGEEESQR*
Ga0126377_125946131	3300010362	Tropical Forest Soil	LAELTSLVNDASAAVKSISEVELTGLNKKMNDAGIPHIVPAPLRPRGGPGGEEESDR*
Ga0137392_102786632	3300011269	Vadose Zone Soil	ASAQVKKIAEEDLAALNKKMNEAGIPHIVPAPPEPRGRGGNEEDDR*
Ga0137392_104405821	3300011269	Vadose Zone Soil	SGQVKKIADEELPALNKKMNEAGIPHIVLAPPQPRGGRGGEAYFEQ*
Ga0137392_115711361	3300011269	Vadose Zone Soil	KLAELTPLVNDASAQVKKISEEELPALNKKMNDAGIPHIVPAPPPPRGGRGGEVESEQ*
Ga0137391_114998591	3300011270	Vadose Zone Soil	APLVSDASAQVKKIVEEDLAALNKKMNDAGIPHIVPAAPQPRGGRGGEEESDR*
Ga0137393_108441051	3300011271	Vadose Zone Soil	KEKLAELTPLVNDASGQVKKIADEELPALNKKMNEAGIPHIVPAPPQPRGGRGVEAY*
Ga0137393_110874022	3300011271	Vadose Zone Soil	QLVNDALAQVKKIADEELPALNKKMNDAGIPHIVPAPPQPRGGRGGDVDSEQ*
Ga0137389_108400912	3300012096	Vadose Zone Soil	LAELMQLVNDALAQVKKIADEELPALNKKMNDAGIPHIVPAPPQPRGGRGGEVESEQ*
Ga0137388_102906322	3300012189	Vadose Zone Soil	SAQVKKISEEELPALNKKMNDAGIPHIVPAPPPPRGGRGGEVESEQ*
Ga0137388_105332502	3300012189	Vadose Zone Soil	DASAAVKNISEVELPALNKKMNDAGIPHIVPAPQPRGERGGEEEQ*
Ga0137364_107086292	3300012198	Vadose Zone Soil	VNDASAQVKKIADEELPALNKKMNDAGIPHIVPEPPPPRAGRGGQGELEQ*
Ga0137363_105269402	3300012202	Vadose Zone Soil	KLSELTPLVNDASGQVKKIAEEDLPALNKKMNDAGIPHIVPAPPQPRGGRGGEEESDQ*
Ga0137363_105755741	3300012202	Vadose Zone Soil	QVKKIADEELPALNKKMNDAGIPHIVPAPPQPRSGRGVEVEPEQ*
Ga0137381_109345121	3300012207	Vadose Zone Soil	KLAELTPLVNDASGQVKKIADEELPALNKKMNEAGIPHIVHAPPQPRGGRGGEAYFEQ*
Ga0137379_107139422	3300012209	Vadose Zone Soil	VKKIADEELPALNKKMNEAGIPHIVPAPPQPRGGRGGEAYFEQ*
Ga0137379_107440401	3300012209	Vadose Zone Soil	LTPLVNDASGQVKKIADEELPALNKKMNEAGIPHIVPAPPQPRGGRGGEAYFEQ*
Ga0137378_114574722	3300012210	Vadose Zone Soil	SAQVKKIVDEDLAALNKKMNEAGIPHIVPSPTAPRGGGGNDQDDGDGGR*
Ga0137377_104495592	3300012211	Vadose Zone Soil	ASVQVKKISEQDLAALNKKMNDAGIPHIVPAPVASRSRGGNDDDDDGVN*
Ga0137377_105321211	3300012211	Vadose Zone Soil	KKIAEEELPALNKKMNDAGIPHIVPAPPQPRGGRGGQEEWEP*
Ga0137377_116814452	3300012211	Vadose Zone Soil	ALAQAKKIAEEELPALNKKMNDAGIPHIVPAPPQPRGGRGGQQEWQP*
Ga0137387_109780292	3300012349	Vadose Zone Soil	TPLVNDASGQVKKIADEELPALNKKMNEAGIPHIVPAPPQPRGGRGGEAYFEQ*
Ga0137386_105539842	3300012351	Vadose Zone Soil	QVKKIADEELPALNKKMNEAGIPHIVPAPPQPRGGRGGEAYFEQ*
Ga0137360_100080611	3300012361	Vadose Zone Soil	QVKKIAEEDLPALNKKMNDAGIPHIVPAPPQPRGGRGGEQESDQ*
Ga0137360_102649641	3300012361	Vadose Zone Soil	AELTPLVADASAQVKKIVDEDLAALNKKMNDAGIPHIVPAPPASRENGRNSQDDDDDGR*
Ga0137390_102056821	3300012363	Vadose Zone Soil	KLAELTPLVNDASTQVKKIADEELPALNKKMNDAGIPHIVPAPPQPRGGRGGEEELDQ*
Ga0137358_100625131	3300012582	Vadose Zone Soil	NDASMQVKKIAEEELPALNKKMNDAGIPHIVPAPPQTRGGRGSEEESEQ*
Ga0137358_100845571	3300012582	Vadose Zone Soil	LMPLVTDASAQVKKIADEELPALNKKMNDAGIPHIVPAPPQPRGGRGGEEDSDQ*
Ga0137358_101730531	3300012582	Vadose Zone Soil	KIADEELPALNKKMNDAGIPHIVPAPPQPRGGRGGEVESEQ*
Ga0137358_107084671	3300012582	Vadose Zone Soil	LTPLVNDASAQVKKIAEEELPALNKKMNDAGIPHIVPAPPPTRSGRGGEEEFER*
Ga0137398_102300801	3300012683	Vadose Zone Soil	ASAQVKKIADEELPALNKKMNDAGIPHIVPAPPQPRGGRGGDVDSEQ*
Ga0137398_107501061	3300012683	Vadose Zone Soil	VNDASAQVKKIADEELPALNKKMNDAGIPHIVPAPPQPRGGRGGDVDSEQ*
Ga0137395_100175831	3300012917	Vadose Zone Soil	QVKKISDEELPALNKKMNDAGIPHIVPAPSQSRGGRGGEEESEQ*
Ga0137396_112978361	3300012918	Vadose Zone Soil	PLVNDASVQVKKISDEELPALNKKMNDAGIPHIVPAPPQSRGGRGGEEESEQ*
Ga0137413_100007951	3300012924	Vadose Zone Soil	TPLVNDASAQVKKIADEELPALNKKMNDAGIPHVVPAPPPPRAGRGGEGELER*
Ga0137413_109580482	3300012924	Vadose Zone Soil	SEASAQVKKIVDEDLAALNKKMNDAGIPHIVPAPPAPRGAGGNGDDDHDR*
Ga0137419_111662832	3300012925	Vadose Zone Soil	LAPLVSAASVQVKKISEQDLASLNKKMNDAGIPHIVPAPVASRSRGGNDDDDDVGN*
Ga0137416_122253371	3300012927	Vadose Zone Soil	ELTPQVSEASAQVRKLAEEELPALNKKMNEAGIPHIVPAPQPSRGGQGEEEER*
Ga0137404_102950021	3300012929	Vadose Zone Soil	ASAQVKKIAEDDLAALNKKMNDAGIPHIVAEPASSRRRGGPDNDDDDER*
Ga0137404_114200992	3300012929	Vadose Zone Soil	LAEMTPLVSEASAQVKKLAEEDLPALNKKMNEAGIPHIVPAAQTSRGAQGHEEEER*
Ga0137404_118841791	3300012929	Vadose Zone Soil	SEASAQVKKLTEEDLPALNKKMNEAGIPHIVPAPQPSRGGQGDEEEER*
Ga0137404_120731592	3300012929	Vadose Zone Soil	AELTPLVSEASAQVKKLAEEELPALNKKMNEAGIPHIVPAPQPSRGGQRDEEEDL*
Ga0137407_124098602	3300012930	Vadose Zone Soil	VSDASAQVKKISEEELPALNKKMNEAGIPHIVPAPAQSRGGRGGEEESDL*
Ga0153916_104684142	3300012964	Freshwater Wetlands	AELAPLVTEASAQVKKLAEEDLPALNKKMNEAGIPHIVPAAGAQPGPGGKEEETEK*
Ga0126369_117832951	3300012971	Tropical Forest Soil	KISEVELAGLNKKMNDAGIPHIVPAPPRPRGGPGGEEESQR*
Ga0134077_100175802	3300012972	Grasslands Soil	AELIPLVNDASTQVKKIAEEELPALNKKMNDAGIPHIVPAPPQPRSGRGGEEESD*
Ga0164307_106304581	3300012987	Soil	LVSDASAQVNKIVDDDLAALNKKMNDAGIPHIVPAPPSGSVRGGSADDDDEGGV*
Ga0134075_105592021	3300014154	Grasslands Soil	SAQVKKIVDEDLAALNKKMNDAGIPHIVPAPPAPRGAGGGEEDDDDR*
Ga0163163_117050391	3300014325	Switchgrass Rhizosphere	AQIKKISDEDLPALNKKMNDAGIPHIVPASPSSSGRRGGDDDDDDL*
Ga0137405_11203201	3300015053	Vadose Zone Soil	KIVDEDLAALNKRMNDAGIPHIVPAPPAPRGAGGDDEDDDDR*
Ga0137420_13200732	3300015054	Vadose Zone Soil	LVSDASAQVKKISEEDLPALNKKMNEAGIPHIVPAPAQSRGGRGGEEESDL*
Ga0137412_100004281	3300015242	Vadose Zone Soil	PLVNDASAQVKKIADEELPALNKKMNDAGIPHVVPAPPPPRAGRGGEGELER*
Ga0137412_104194751	3300015242	Vadose Zone Soil	ELAPLVSAASVQVKKISEQDLASLNKKMNDAGIPHIVPAPVASRSRGGNDDDDDGGN*
Ga0182041_113054151	3300016294	Soil	RSVSTPFTAAEASAAVKGVSDDLAALNKKMNDAGIPHIVPAPPRPRTGFGDGDSEAR
Ga0134083_100291492	3300017659	Grasslands Soil	ELIPLVNDASTQVKKIAEEELPALNKKMNDAGIPHIVPAPPQPRSGRGGEEESD
Ga0187803_103375882	3300017934	Freshwater Sediment	PLVSEASAQVKRIAEEDLPALNKKMNDAGIPHIVPAPIPQPRGDEDEEESHR
Ga0187778_106422902	3300017961	Tropical Peatland	AQVKKIADEDLPALNKKMNDAGIPHIVPVTPPSTGRFGGEE
Ga0210403_110005672	3300020580	Soil	LANDASALVKKIVEEDLPALNKKMNDAGIPHIVPAPPQPRPGRGGDSDDDES
Ga0210399_115216002	3300020581	Soil	PPLANDASAQVKKIVEEDLPALNKKMNDAGIPHIVPAPPQPRSGRGGDSDDDES
Ga0210401_111742831	3300020583	Soil	SAQVKKIAEEELPGLNKKMNDAGIPHIVPATPQSRGGRGGEEGSER
Ga0210406_104669492	3300021168	Soil	SAQVKKIVEEDLPALNKKMNDAGIPHIVPVQPQRPGGRGGDSDDDES
Ga0210405_109258822	3300021171	Soil	LVNDASAQVKKVSDEELPALNKKMNDAGIPHIVPAPPQPRGGRGGDEDSGR
Ga0210405_114223281	3300021171	Soil	ANEASAQVKKIVEEDLPALNKKMNDAGIPHIVPAPPQQRPGRAGDSDDDES
Ga0210408_104686742	3300021178	Soil	VQVKKISDEELPALNKKMNDAGIPHIVPAPPPSRGGRGGEQESEQ
Ga0210408_108454312	3300021178	Soil	KEKLAEVTPLVNDASAQVKKMADEELPALNKKMNDAGIPHIVPAAPPPRGGRGREEGSEQ
Ga0210388_105731842	3300021181	Soil	SEASAQVKAVAEEDLPALNKKMNAAGIPHIVPAPPQGRGTRGGEEEE
Ga0210393_102668822	3300021401	Soil	ELGPELSDASAQVKKLVEEELPALNKKMNDAGIPHIVPGTPAASGGSGDEEEEEP
Ga0210383_108330012	3300021407	Soil	ASAQVKKIVEEDLPALNKKMNDAGIPHIVPAPPQQRPGRAGDSDDDES
Ga0210384_109792161	3300021432	Soil	DASAQVKKIAEEDLPALNKKMNDAGIPHIVPAPPQGRVGRGGEAEEEEP
Ga0210390_112839152	3300021474	Soil	ELPPLANEASAQVKKIVEEDLPALNKKMNDAGIPHIVPAPQPRPGGRALDSDDDES
Ga0210410_105686772	3300021479	Soil	MLVNDASAQVKKVSDEELPALNKKMNDAGIPHIVPAPPQPRGGRGGDEDSGR
Ga0126371_121314511	3300021560	Tropical Forest Soil	VKKISEVELAGLNKKMNDAGIPHIVPAPPRPRGGPGGEEESQR
Ga0242660_10610231	3300022531	Soil	AQVKKIAEEELPGLNKKMNDAGIPHIVPATPQSRGGRGGEEGSER
Ga0247680_10259722	3300024246	Soil	QVKKIAEEDLPALNKKMNDAGIPHIVPITPPPTGRRGGEEEDEP
Ga0137417_10464982	3300024330	Vadose Zone Soil	ELTPLVNDASAQVKKIADEELPALNKKMNDAGIPHVVPVPPPRAGRGGEGGLEQ
Ga0247668_10389331	3300024331	Soil	VKKIAEDDLAALNKKMNDAGIPHIVAEPAGSRRRGGPDNDDDDDR
Ga0209350_11015861	3300026277	Grasslands Soil	LVNDASAQVKKIADEELPALNKKMNDAGIPHIVPAPPPPRAGRGGEGELEP
Ga0209240_11977382	3300026304	Grasslands Soil	REKLAELTPLVNDASAQVKKVSEEELPALNKKMNDAGIPHIVPAPSQPRGGEEDSEL
Ga0209802_10310732	3300026328	Soil	VKKIVDEDLAALNKKMNDAGIPHIVPAPPAPRGAGGNDDDDDR
Ga0209690_10510522	3300026524	Soil	AAVKNISAVELPALNKKMNDAGIPHIVPAPQPRGERGGEVESER
Ga0179587_104917011	3300026557	Vadose Zone Soil	QLVNDASAQVKKIADEELPALNKKMNDAGIPHIVPAPPQPRGGRGGDVDSEQ
Ga0209219_10636321	3300027565	Forest Soil	ASAQVKKIVEEDLPALNKKMNDAGIPHIVPAPPPQRPGRGGDSDDDES
Ga0209220_11527922	3300027587	Forest Soil	LAELTPLVNDASMQVKKMAEEELPALNKKMNDAGIPHIVPAPPQPRSGRGGEEESEQ
Ga0209422_11493361	3300027629	Forest Soil	LAELPPLVNDASAQVKKIVEEDLPALNKKMNEAGIPHIVPALPQQRPGRGGDSVDDES
Ga0209118_10916141	3300027674	Forest Soil	NDASMQVKKIAEEELPALNKKMNDAGIPHIVPAPPQPRSGRGGEEESEQ
Ga0209177_103647811	3300027775	Agricultural Soil	NPLVNDASAQVKKISEEELPALNKKMNDAGIPHIVPAPPQPRGGRGGEEESEQ
Ga0209180_102582962	3300027846	Vadose Zone Soil	PLVNEASAQVKKIAEEDLPALNKKMNDAGIPHIVPAPPQPRGGRGREEEIPR
Ga0209180_107875792	3300027846	Vadose Zone Soil	TPLVSDASAQVKKITEEDLAGLNKKMNEAGIPHIVPAPPAPRSGGGDEEDDR
Ga0209180_107916351	3300027846	Vadose Zone Soil	LTPLVNDASAQVKKIADEELPALNKKMNDAGIPHLVPAPPQPRAGRGGEGELEQ
Ga0209274_103125581	3300027853	Soil	GSAQVKKMAEEDLPALNKKMNDAGIPHIVPATTPAAGHGAGEEDEP
Ga0209693_105560911	3300027855	Soil	VNDASAAVKRISEEDLPALNKKMNDAGIPHIVPAPPQSRGGRGGEEDGER
Ga0170823_146238932	3300031128	Forest Soil	TPLVAEASAQVKKIVDEDLAALNKKMNEAGIPHIVPAPPTPRRTGGNDQDDDDGGR
Ga0307475_102053822	3300031754	Hardwood Forest Soil	AELAPLVNDASAAVKKIAEEDLPSLNKKMNDAGIPHIVPAPPQPRGGRGGEEESEQ
Ga0307475_104912422	3300031754	Hardwood Forest Soil	LSPLVNDASAQVKKIAEEDLPALNKKMNEAGIPHIVPAPAQSRGGRGGEEEPDI
Ga0307473_106361501	3300031820	Hardwood Forest Soil	AELTPLVNDALAQAKKIAEEELPALNKKMNDAGIPHIVPAPPQPRGGRGDQEELEP
Ga0307479_112591681	3300031962	Hardwood Forest Soil	ASAQVKKMVDEDLAALNKKMNDAGIPHIVPAPPAPRENGRNSRDDDDDGR
Ga0307470_105931212	3300032174	Hardwood Forest Soil	LAELTPLVSESSAQVKNLAEEDLPALNKKMNEAGIPHIVPAAQASRGGQGDEEEEW
Ga0307471_1014508332	3300032180	Hardwood Forest Soil	SALVKEIADGEFPALNKKMNDAGIPHIVPAPPQPRGGRGDEEDSDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences