Metagenome Family F068281

Overview

Basic Information

• Family ID: F068281
• Family Type: Metagenome
• Number of Sequences: 125
• Average Sequence Length: 96 residues
• Representative Sequence: LSAQKKDRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
• Number of Associated Samples: 117
• Number of Associated Scaffolds: 125

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 28.57 %
• % of genes near scaffold ends (potentially truncated): 43.20 %
• % of genes from short scaffolds (< 2000 bps): 77.60 %
• Associated GOLD sequencing projects: 106
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (60.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.200 % of family members)
• Environment Ontology (ENVO): Unclassified (37.600 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (56.800 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 51.33%
  β-sheet: 0.00%
  Coil/Unstructured: 48.67%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01152	Bac_globin	9.60
PF01594	AI-2E_transport	9.60
PF11752	DUF3309	4.00
PF13545	HTH_Crp_2	3.20
PF00027	cNMP_binding	3.20
PF05532	CsbD	3.20
PF01988	VIT1	2.40
PF03330	DPBB_1	1.60
PF00072	Response_reg	0.80
PF06823	DUF1236	0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	9.60
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	9.60
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	3.20
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	2.40
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	2.40
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.80

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	40.00 %
Unclassified	root	N/A	60.00 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	40.00 %
Unclassified	root	N/A	60.00 %

Level 3

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.20 %
Unclassified	root	N/A	60.00 %

Level 4

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.40 %
Unclassified	root	N/A	60.00 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.60 %
Unclassified	root	N/A	60.00 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.80 %

Level 6

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.40 %
Unclassified	root	N/A	60.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.80 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	7.20 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.00 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.80 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.80 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.60 %
Unclassified	root	N/A	60.00 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.80 %

Level 8

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	6.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.40 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	4.80 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.80 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.80 %
Unclassified	root	N/A	60.00 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.80 %
unclassified Rhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae	0.80 %

Level 9

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Beijerinckia indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia indica	6.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.40 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Mesorhizobium sangaii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	4.80 %
Methylocapsa acidiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	0.80 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	0.80 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.80 %
Unclassified	root	N/A	60.00 %

Level 10

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Beijerinckia indica subsp. indica	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia indica → Beijerinckia indica subsp. indica	6.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.40 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Mesorhizobium sangaii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	4.80 %
Methylocapsa acidiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	0.80 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	0.80 %
Rhizobium pisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pisi	0.80 %
Unclassified	root	N/A	60.00 %

Level 11

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Beijerinckia indica subsp. indica ATCC 9039	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia indica → Beijerinckia indica subsp. indica → Beijerinckia indica subsp. indica ATCC 9039	6.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.40 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Mesorhizobium sangaii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	4.80 %
Methylocapsa acidiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	0.80 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	0.80 %
Rhizobium pisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pisi	0.80 %
Unclassified	root	N/A	60.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
(restricted) 3300031248|Ga0255312_1031368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1269
2162886007|SwRhRL2b_contig_754580	Not Available	848
3300000891|JGI10214J12806_11713258	All Organisms → cellular organisms → Bacteria	577
3300000953|JGI11615J12901_10014444	All Organisms → cellular organisms → Bacteria	553
3300003371|JGI26145J50221_1026875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	576
3300004480|Ga0062592_100363405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1132
3300004643|Ga0062591_102407963	Not Available	552
3300005146|Ga0066817_1011608	Not Available	714
3300005161|Ga0066807_1005331	Not Available	1091
3300005164|Ga0066815_10022358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	894

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.40%
Host-Associated	Host-Associated	45.60%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	45.60%
Terrestrial	Environmental → Terrestrial	54.40%

Category

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	28.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.60%
Soil	Environmental → Terrestrial → Soil	54.40%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.40%
Loam	Environmental → Terrestrial → Soil → Loam	11.20%
Sand	Environmental → Terrestrial → Soil → Sand	0.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.20%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.40%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.80%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.20%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.80%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0076.00001090	2162886007	Switchgrass Rhizosphere	LILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
JGI10214J12806_117132582	3300000891	Soil	VTSLVGTSAARSELTTMTYQSDARRDKQEDRFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS*
JGI11615J12901_100144441	3300000953	Soil	VAFLVGTSAARSELTTMTYQSDARRDKQEDKFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQ
JGI26145J50221_10268751	3300003371	Arabidopsis Thaliana Rhizosphere	PGLAAFLGGTSAAQSELTTMTDSDLRRDKRNDKFYISWIIRGGIVLAIVIAAFAFISTGTYPDLNVPQTTKTVPAPTS*
Ga0062592_1003634052	3300004480	Soil	LILKRAKEKKGRLATFLVGTSAARSELTIMTYQSETRRDKRDDKFYTSWIIRGGIVLAIVIAALAFISTGTYTDLDAPQIITTAPAS*
Ga0062591_1024079631	3300004643	Soil	VAFLVGTSAARLGLTTMTDQSDLRRDKRDDKFFISWIIRGSIVLAIVIAALAFTSTNYPGPDVPRTTTTVPDPAS*
Ga0062594_1010214682	3300005093	Soil	MMGSVVLLTAPLSQQSFLDRPASNRLVTSLVGTSAARSELTTMTYQSDARRDKQEDRFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS*
Ga0066817_10116081	3300005146	Soil	LSAQKKDRLVAFLVGTSAARLGLTTMTDQSDLRRDKRDDKFFISWIIRGSIVLAIVIAALAFTSTNYPGPDVPRTTTTVPDPAS*
Ga0066807_10053312	3300005161	Soil	LARCKIAGQHFEKLAEVRFVPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDRGVPQIIRTVPGPAS*
Ga0066815_100223582	3300005164	Soil	MSALPPKADMCSATRHVRLVPIADISYAQKKDRLVAFLVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAALAFTSTGNYPDRGVPQIIRTVPGPAS*
Ga0066809_101074711	3300005168	Soil	MSALPPKADMCSATRHVRLVPIADISYAQKKDRLVAFLVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVFAIVIAALAFISTGTYPDLDAPQIITTA
Ga0066810_101659831	3300005169	Soil	AQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAALAFTSTGNYPDRGVPQIIRTVPGPAS*
Ga0065717_10026643	3300005276	Arabidopsis Rhizosphere	MSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0065716_100001910	3300005277	Arabidopsis Rhizosphere	VQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0065712_100775154	3300005290	Miscanthus Rhizosphere	VPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0065715_100018696	3300005293	Miscanthus Rhizosphere	VPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0065715_104595392	3300005293	Miscanthus Rhizosphere	MMGSVVLLTAPLSQQSFLDRPASNRLVTSLVGTSAARSELTTMTYQSDARRDKQEDRFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVP
Ga0065715_105304201	3300005293	Miscanthus Rhizosphere	ACPLYPQKRTWAVQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0070683_1009381552	3300005329	Corn Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0068869_1007303122	3300005334	Miscanthus Rhizosphere	CKRACPLYPQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0068868_1006563041	3300005338	Miscanthus Rhizosphere	RTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAILAFISTGTYPDLDAPQITTTVPGPAS*
Ga0070660_1003371441	3300005339	Corn Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070660_1005036262	3300005339	Corn Rhizosphere	YPQKRTWAVQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0070687_1002907552	3300005343	Switchgrass Rhizosphere	VPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070692_100845384	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070692_104927652	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	HLQCKRACPLYPQKRTWAVQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0070668_1003136841	3300005347	Switchgrass Rhizosphere	HFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070669_1000623412	3300005353	Switchgrass Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070674_1018315601	3300005356	Miscanthus Rhizosphere	MSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQI
Ga0070659_1021529261	3300005366	Corn Rhizosphere	SIGRTHRLARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070667_1004660632	3300005367	Switchgrass Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070701_104279991	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	EDISQKKRRLAVGTSAVQSELTTMTDQSDLRDKRDDKFYISWIIRGGIVLALVVAVLAFISTGYPTTVPASVF*
Ga0070700_1002543241	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TSLVGTSAARSELTTMTYQSDARRDKQEDRFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS*
Ga0070708_1014675651	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LSAQKKDRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070678_1004260251	3300005456	Miscanthus Rhizosphere	IDHLLGRVAAFLVGTSAVQSELTTMTDQSDLRDKRDDKFYISWIIRGGIVLALVVAVLAFISTGYPTTVPASVF*
Ga0070678_1016666502	3300005456	Miscanthus Rhizosphere	MSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVTAALAFISTGTYPDLDAPQIITTAPAS*
Ga0070662_1000755474	3300005457	Corn Rhizosphere	VPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070685_107406481	3300005466	Switchgrass Rhizosphere	KKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070679_1003070064	3300005530	Corn Rhizosphere	LARCKIAGQHFEKPAEVRFVPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0070696_1000251907	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	YKIDHLLGRVAAFLVGTSAVQSELTTMTDQSDLRDKRDDKFYLSWIIRGGIVLALVVAVLAFISTGYPTTVPASVF*
Ga0068857_1022295901	3300005577	Corn Rhizosphere	GRLATFLVGTSAARSELTIMTYQSETRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0068856_1005052422	3300005614	Corn Rhizosphere	MLARTCASYVCFRPTEDISPKKHRLAAFLVGTSAVQSELTTMTDQSDLRDKRDDKFYLSWIIRGGIVLALVVAVLAFISTGYPTIVPASVF*
Ga0070702_1016094482	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	AAFLVGTSAVQSELTTMTDQSDLRDKRDDKFYISWIIRGGIVLALVVAVLAFISTGYPTTVPASVF*
Ga0068860_1001161172	3300005843	Switchgrass Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0068865_1004376131	3300006881	Miscanthus Rhizosphere	ISGHLQCKRACPLYPQKRTWAVQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPCPAS*
Ga0111539_1000871912	3300009094	Populus Rhizosphere	LILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0111538_124563381	3300009156	Populus Rhizosphere	VQKKDRLVPFLAGTAATQPGLTTMTDQSDLRSDKRDDKFYISWIIRGGIVLAVVIAALAFTSTGNYPDRDAPQITRTVPGPAS*
Ga0105241_113304422	3300009174	Corn Rhizosphere	LARYKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0134123_123008872	3300010403	Terrestrial Soil	KAAVNRLVSALVGTSAAQAELATMTYQSDARRDKQEDRFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS*
Ga0157324_10444451	3300012506	Arabidopsis Rhizosphere	KCQKRTSAKSHLLILSAQKKDRLVAFPVGTSADQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0157305_100123592	3300012891	Soil	LSAQKKDRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0157294_102974692	3300012892	Soil	SLSAQKKGRLATFIVGTSAARSELTIMTYQSETRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0157295_103589931	3300012906	Soil	LILKRAKEKKGRLATFLVGTSAARSELTIMTYQSETRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPG
Ga0157283_100017316	3300012907	Soil	VPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS*
Ga0157298_100414671	3300012913	Soil	VPIADISYAQKKVRFVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0157302_101041972	3300012915	Soil	RLAAFLVGTSAVRSELTTMTDQSDLRDKRDDKFYISWIIRGGIVLALVVAVLAFISTGYPTTVPASVF*
Ga0157310_100393322	3300012916	Soil	VFEENGNSRNKGSLYKIDHLLGRVAAFLVGTSAVQSELTTMTDQSDLRDKRDDKFYLSWIIRGGIVLALVVAVLAFISTGYPTIVPASVF*
Ga0164298_107305891	3300012955	Soil	MYALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0164303_103503142	3300012957	Soil	LILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYISWIIRGGVVLALVIAVLAFISTGSYPDLEAPQLTTTVPASVF*
Ga0164307_118277042	3300012987	Soil	AFTLLVGTSAAGSELTTMTDQSDLRSDIRDDKFYISWIIRGGVVLALVIAVLAFISTGSYPDLEAPQLTTTVPASVF*
Ga0164305_119012531	3300012989	Soil	QAFTLLVGTSAAGSELTTMTDQSDLRSDIRDDKFYISWIIRGGVVLALVIAVLAFISTGSYPDLEAPQITTTVPASVF*
Ga0157307_10351821	3300013096	Soil	SYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS*
Ga0157373_115049261	3300013100	Corn Rhizosphere	LILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAALAFISTGTYTDLDAPQIITTAPAS*
Ga0157372_113271481	3300013307	Corn Rhizosphere	VPIADISYAQKKVRLVAFLVGTSAARLGLTTMTDQSDLRRDKRDDKFFISWIIRGSIVLAIVIAALAFTSTNYPGPDVPRTTTTVPDPAS*
Ga0157375_114500193	3300013308	Miscanthus Rhizosphere	AFAVGTSAVASGLTIMTDQSDLRRDKRDDKFYIWWIIRGGVVLALVIAALAFTSMNYPDTDAPAITTTVPATAS*
Ga0173478_103283761	3300015201	Soil	LILKRAKEKKGRLATFLVGTSAARSELTIMTYQSETRRDKRDDKFYISWIIRGGIVLALVVAVLAFISTGYPTTVPASVF*
Ga0132256_1009239772	3300015372	Arabidopsis Rhizosphere	LILSAQKKDRLVAFPVGTSAVQSELTIMTYQSNTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS*
Ga0132257_1009320843	3300015373	Arabidopsis Rhizosphere	FLVGTSAARSELTIMTYQSETRRDKRDDKFYTSWIIRGGIVLAIVIAALAFISTGTYPDLDAPQIITTAPAS*
Ga0132255_1033045662	3300015374	Arabidopsis Rhizosphere	MPPQQFAVFLFLVGTSAARSELTIMTYQSDARRDKRDDKFYISWIVRGGIVLAIIIAALAFTSTNYPDRDVSPITTTVPAPAS*
Ga0173481_100030026	3300019356	Soil	VPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0173482_100001392	3300019361	Soil	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0173482_103243421	3300019361	Soil	VQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTDPGPAS
Ga0173479_100003048	3300019362	Soil	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0247788_10361492	3300022901	Soil	VQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0247791_10038171	3300023062	Soil	MSAKGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0247752_10016742	3300023071	Soil	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0247744_10173472	3300023073	Soil	SIGRTHRLARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0247798_10010467	3300023260	Soil	VPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0247794_101699171	3300024055	Soil	MSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAALAFISTGTYPDLDAPQIITTAPAS
Ga0207666_10022193	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	VQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0207688_101507472	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIITYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0207680_111327411	3300025903	Switchgrass Rhizosphere	RKDNRRAAFAVGTSAVASGLTIMTDQSDLRRDKRDDKFYIWWIIRGGVVLALVIAALAFTSMNYPDTDAPAITTTVPATAS
Ga0207647_105560331	3300025904	Corn Rhizosphere	MSALGQKRTSAKSHLLILKRAKEKKGRLATFLVGTSAARSELTIMTYQSETRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0207671_101783412	3300025914	Corn Rhizosphere	LARYKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0207660_113392272	3300025917	Corn Rhizosphere	GGACGIFKCLLCSKRGHLQCKRACPLYPQKRTWAVQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0207657_102192202	3300025919	Corn Rhizosphere	MMGSVVLLTAPLSQQSFLDRPASNRLVTSLVGTSAARSELTTMTYQSDARRDKQEDRFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS
Ga0207681_103676513	3300025923	Switchgrass Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0207706_117110761	3300025933	Corn Rhizosphere	SVVLLTAPLSQQSFLDRPASNRLVTSLVGTSAARSELTTMTYQSDARRDKQEDRFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS
Ga0207689_109071021	3300025942	Miscanthus Rhizosphere	CKRACPLYPQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0207712_108559312	3300025961	Switchgrass Rhizosphere	LARYKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0207640_105369843	3300025981	Corn Rhizosphere	LVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0207708_102412833	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAAFAFISTGTYPDLDVPQTTTTVPAPAS
Ga0207708_103450774	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	FLDRPASNRLVTSLVGTSAARSELTTMTYQSDARRDKQEDRFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS
Ga0207641_122888051	3300026088	Switchgrass Rhizosphere	MSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0207648_110866631	3300026089	Miscanthus Rhizosphere	LSAQKKDRLVAFLVGTSAARLGLTTMTDQSDLRRDKRDDKFFISWIIRGSIVLAIVIAALAFTSTNYPGPDVPRTTTTVPDPAS
Ga0207683_115965472	3300026121	Miscanthus Rhizosphere	MSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVRRLE
Ga0207552_1053841	3300026771	Soil	AGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0207511_1030382	3300026802	Soil	VQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPD
Ga0207502_1010463	3300026828	Soil	RSIGRTHRLARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0207444_10040503	3300026900	Soil	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLD
Ga0208761_10206681	3300026995	Soil	ALPPKADMCSATRHVRLVPIADISYAQKKDRLVAFLVGTSAARLGLTTMTDQSDLRRDKRDDKFFISWIIRGSIVLAIVIAALAFTSTNYPGPDVPRTTTTVPDPAS
Ga0209969_10063971	3300027360	Arabidopsis Thaliana Rhizosphere	GSPGLAAFLGGTSAAQSELTTMTDSDLRRDKRNDKFYISWIIRGGIVLAIVIAAFAFISTGTYPDLNVPQTTKTVPAPTS
Ga0207561_1041112	3300027430	Soil	SYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0207468_10008641	3300027444	Soil	CKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0209995_10248393	3300027471	Arabidopsis Thaliana Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAGLAFISTGNYPDLDAPQITRTVPGPAS
Ga0207458_10041372	3300027484	Soil	SALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0209999_10816081	3300027543	Arabidopsis Thaliana Rhizosphere	LARYKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0209982_10059251	3300027552	Arabidopsis Thaliana Rhizosphere	SHLLILERAKERPPQRRLVGTSVARSELTIMTYQSHLRSDIRDDKFYISWIIRGSIVLALVIAALAFTSTNYPDVPQITTTVPASAS
Ga0207981_10181271	3300027560	Soil	MSALGQKQTCAAQKVMSALPPKADMCSATRHVRLVPIADISYAQKKDRLVAFLVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0209971_10245533	3300027682	Arabidopsis Thaliana Rhizosphere	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRFVAFLVGTSAAPSELIIMTYQSETRRDKRDDKFYTSWIIRGGIVLAIVIAALAFTSTNYPDVPQITTTVPASAS
Ga0209974_100703182	3300027876	Arabidopsis Thaliana Rhizosphere	VAFLVGTSAARSELTTMTYQSDARRDKQEDKFYISWIIRGGIVLAIVIAALAFTSTNYPDRDVPQITTTVPAPAS
Ga0268265_100749465	3300028380	Switchgrass Rhizosphere	LARYKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0268265_115277442	3300028380	Switchgrass Rhizosphere	LSAQKKRRLATFLVGTLAARSELTIMTYQSETRRDKRADKFYISWIIRGGIVLAIVIAAFAFISTGTYPDLDVPQTTTTVPAPAS
Ga0268264_124008981	3300028381	Switchgrass Rhizosphere	HLQCKRACPLYPQKRTWAVQLGMSALGQKRTSAKSHLLILSAQKKDRLVAFPVGTSAVQSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAVLAFISTGTYPDLDAPQITTTVPGPAS
Ga0247828_102951092	3300028587	Soil	LSAQKKDRLVAFLVGTSAVRSELTIMTYQSDTRRDKRDDKFYTSWIIRGGIVLAIVIAALAFTSTGNYPDRGVPQIIRTVPGPAS
(restricted) Ga0255312_10313683	3300031248	Sandy Soil	MPPQQFAVFLFLVGTSAARSELTTMTYQSDARRDKRDDKFYISWIIRGGIVLAIIIAALAFTSTNYPDRDVPQITTTVPAPAS
Ga0310813_112250852	3300031716	Soil	LILKRAKEKKGRLATFLVGTSAARSELTIMTYQSETRRDKRDDKFYTSWIIRGGIVLAIVIAALAFISTGTYPDLDAPQIITTAPAS
Ga0310907_100086062	3300031847	Soil	LARYKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPDLDVPQVTRTVPGPAS
Ga0310892_100139962	3300031858	Soil	LARYKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISRIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0310901_100057935	3300031940	Soil	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPGLDVP
Ga0310884_110819921	3300031944	Soil	IAHIFGMSALGQKQTCAAQKVMSALSPKADMCGATRDVRFVPIADISYAQKKDRLVSFLVGTSAVQSELTIMTYQSETRREKRDDKFYTSWIVRGGIVLAIVIAALAFISTGTYPDRDVPQIIRTVPGPAS
Ga0310895_100073892	3300032122	Soil	LARCKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISRIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0310889_100065106	3300032179	Soil	LARYKIAGQHFEKPAEVRLVPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISWIIRGGIVLAIVIAALAFTSTGNYPGLDVPQMTRTVPGPAF
Ga0310810_105181852	3300033412	Soil	VAFLVGTSAAPSELIIMTYQSDARRDKRDDKFYISWIIRGGIVLVIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS
Ga0373959_0121512_174_449	3300034820	Rhizosphere Soil	VPIADISYAQKKVRLVAFLVGTSAAPAELIIMTYQSDARRDKRDDKFYISRIIRGGIVLAIVIAALAFTSTGNYPDLDVPQMTRTVPGPAS