Metagenome Family F068176

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068176
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	69 residues
Representative Sequence	MSPQTAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE
Number of Associated Samples	94
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.19 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	89.60 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.400 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (44.000 % of family members)
Environment Ontology (ENVO)	Unclassified (39.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.52% β-sheet: 0.00% Coil/Unstructured: 35.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.67.3.1: Ribosome recycling factor, RRF	d1wqga_	1wqg	0.81157
d.67.3.1: Ribosome recycling factor, RRF	d1dd5a_	1dd5	0.8069
f.13.1.0: automated matches	d6eida_	6eid	0.78394
a.2.7.0: automated matches	d6p24c1	6p24	0.77962
a.29.16.1: IVS-encoded protein-like	d2gsca1	2gsc	0.77883

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF06067	DUF932	1.60
PF00376	MerR	0.80
PF12704	MacB_PCD	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
All Organisms	root	All Organisms	25.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
cellular organisms	root	All Organisms → cellular organisms	24.80 %
Viruses	superkingdom	All Organisms → Viruses	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.80 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.00 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.20 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.00 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	10.40 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	4.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.00 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	8.00 %
Coxiellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae	4.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.40 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	8.00 %
Aquicella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Aquicella	4.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	8.00 %
Aquicella siphonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Aquicella → Aquicella siphonis	4.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.40 %
Magnetospirillum sp. ME-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	8.00 %
Aquicella siphonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Aquicella → Aquicella siphonis	4.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100749578	Not Available	856	Open in IMG/M
3300002914\|JGI25617J43924_10215250	Not Available	641	Open in IMG/M
3300003219\|JGI26341J46601_10012242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2812	Open in IMG/M
3300003368\|JGI26340J50214_10007086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3614	Open in IMG/M
3300005437\|Ga0070710_11200752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	561	Open in IMG/M
3300005439\|Ga0070711_100324217	Not Available	1231	Open in IMG/M
3300005471\|Ga0070698_100773479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	904	Open in IMG/M
3300005536\|Ga0070697_100996632	Not Available	745	Open in IMG/M
3300005764\|Ga0066903_100925245	Not Available	1582	Open in IMG/M
3300006028\|Ga0070717_10782458	Not Available	868	Open in IMG/M
3300006163\|Ga0070715_10457386	Not Available	722	Open in IMG/M
3300006173\|Ga0070716_101558118	Not Available	542	Open in IMG/M
3300006871\|Ga0075434_101284521	Not Available	743	Open in IMG/M
3300006871\|Ga0075434_101715791	Not Available	636	Open in IMG/M
3300006871\|Ga0075434_102474520	Not Available	521	Open in IMG/M
3300007258\|Ga0099793_10132409	Not Available	1173	Open in IMG/M
3300007258\|Ga0099793_10333663	Not Available	740	Open in IMG/M
3300007788\|Ga0099795_10220621	Not Available	807	Open in IMG/M
3300007788\|Ga0099795_10391206	Not Available	630	Open in IMG/M
3300009088\|Ga0099830_10887465	Not Available	737	Open in IMG/M
3300009088\|Ga0099830_11142943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	646	Open in IMG/M
3300009090\|Ga0099827_10767663	Not Available	834	Open in IMG/M
3300009143\|Ga0099792_10053397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Aquicella → Aquicella siphonis	1978	Open in IMG/M
3300009143\|Ga0099792_10084587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1632	Open in IMG/M
3300009143\|Ga0099792_10584197	Not Available	710	Open in IMG/M
3300009143\|Ga0099792_10899503	Not Available	586	Open in IMG/M
3300010043\|Ga0126380_10168767	Not Available	1426	Open in IMG/M
3300010046\|Ga0126384_10041909	Not Available	3107	Open in IMG/M
3300010046\|Ga0126384_12247449	Not Available	526	Open in IMG/M
3300010048\|Ga0126373_10575285	Not Available	1177	Open in IMG/M
3300010159\|Ga0099796_10219963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	778	Open in IMG/M
3300010358\|Ga0126370_11875927	Not Available	582	Open in IMG/M
3300010359\|Ga0126376_12115168	Not Available	606	Open in IMG/M
3300010360\|Ga0126372_12250610	Not Available	594	Open in IMG/M
3300010362\|Ga0126377_10907800	Not Available	944	Open in IMG/M
3300010362\|Ga0126377_13044620	Not Available	541	Open in IMG/M
3300010376\|Ga0126381_100481597	All Organisms → cellular organisms → Bacteria → Proteobacteria	1746	Open in IMG/M
3300011269\|Ga0137392_10694299	Not Available	843	Open in IMG/M
3300011269\|Ga0137392_10787160	Not Available	786	Open in IMG/M
3300011269\|Ga0137392_11095068	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300011270\|Ga0137391_10469321	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1069	Open in IMG/M
3300011271\|Ga0137393_11295418	Not Available	617	Open in IMG/M
3300012189\|Ga0137388_10483496	All Organisms → cellular organisms → Bacteria → Proteobacteria	1149	Open in IMG/M
3300012202\|Ga0137363_10953299	Not Available	728	Open in IMG/M
3300012202\|Ga0137363_10988502	Not Available	715	Open in IMG/M
3300012205\|Ga0137362_10342202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Aquicella → Aquicella siphonis	1295	Open in IMG/M
3300012206\|Ga0137380_11382818	Not Available	589	Open in IMG/M
3300012210\|Ga0137378_11509852	Not Available	583	Open in IMG/M
3300012357\|Ga0137384_10384522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	1160	Open in IMG/M
3300012361\|Ga0137360_11791721	Not Available	520	Open in IMG/M
3300012362\|Ga0137361_10562244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Aquicella → Aquicella siphonis	1046	Open in IMG/M
3300012363\|Ga0137390_10621119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1047	Open in IMG/M
3300012363\|Ga0137390_11435625	Not Available	633	Open in IMG/M
3300012363\|Ga0137390_11513042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Aquicella → Aquicella siphonis	612	Open in IMG/M
3300012582\|Ga0137358_10799620	Not Available	626	Open in IMG/M
3300012685\|Ga0137397_10413375	Not Available	1005	Open in IMG/M
3300012917\|Ga0137395_10985516	Not Available	605	Open in IMG/M
3300012918\|Ga0137396_10535914	Not Available	867	Open in IMG/M
3300012918\|Ga0137396_10846838	Not Available	672	Open in IMG/M
3300012922\|Ga0137394_11609355	Not Available	506	Open in IMG/M
3300012923\|Ga0137359_11152760	Not Available	662	Open in IMG/M
3300012924\|Ga0137413_11016587	Not Available	651	Open in IMG/M
3300012924\|Ga0137413_11568308	Not Available	537	Open in IMG/M
3300012924\|Ga0137413_11717701	Not Available	516	Open in IMG/M
3300012925\|Ga0137419_11823067	Not Available	521	Open in IMG/M
3300012927\|Ga0137416_10783448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	842	Open in IMG/M
3300012927\|Ga0137416_10890463	Not Available	791	Open in IMG/M
3300012927\|Ga0137416_11139917	Not Available	701	Open in IMG/M
3300012944\|Ga0137410_11334178	Not Available	621	Open in IMG/M
3300012989\|Ga0164305_11274288	Not Available	641	Open in IMG/M
3300015242\|Ga0137412_10089819	Not Available	2499	Open in IMG/M
3300015245\|Ga0137409_10045813	Not Available	4175	Open in IMG/M
3300016270\|Ga0182036_11719190	Not Available	530	Open in IMG/M
3300016294\|Ga0182041_10992194	Not Available	759	Open in IMG/M
3300016319\|Ga0182033_10191856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1618	Open in IMG/M
3300016357\|Ga0182032_10539748	Not Available	964	Open in IMG/M
3300016387\|Ga0182040_11199965	Not Available	638	Open in IMG/M
3300018468\|Ga0066662_12223249	Not Available	576	Open in IMG/M
3300020199\|Ga0179592_10438729	Not Available	566	Open in IMG/M
3300020579\|Ga0210407_11087125	Not Available	607	Open in IMG/M
3300020579\|Ga0210407_11151225	Not Available	586	Open in IMG/M
3300020581\|Ga0210399_10528258	Not Available	980	Open in IMG/M
3300021088\|Ga0210404_10442037	Not Available	731	Open in IMG/M
3300021170\|Ga0210400_10146764	All Organisms → cellular organisms → Bacteria → Proteobacteria	1899	Open in IMG/M
3300021170\|Ga0210400_10540387	Not Available	962	Open in IMG/M
3300021178\|Ga0210408_11339131	Not Available	541	Open in IMG/M
3300021178\|Ga0210408_11416600	Not Available	523	Open in IMG/M
3300021420\|Ga0210394_11439845	Not Available	585	Open in IMG/M
3300021432\|Ga0210384_11131275	Not Available	687	Open in IMG/M
3300021479\|Ga0210410_11197902	Not Available	651	Open in IMG/M
3300021559\|Ga0210409_11679019	Not Available	512	Open in IMG/M
3300021560\|Ga0126371_10315923	Not Available	1692	Open in IMG/M
3300021560\|Ga0126371_11499549	Not Available	803	Open in IMG/M
3300025915\|Ga0207693_10017128	All Organisms → cellular organisms → Bacteria	5782	Open in IMG/M
3300025915\|Ga0207693_10729953	Not Available	766	Open in IMG/M
3300025928\|Ga0207700_11410334	Not Available	619	Open in IMG/M
3300026508\|Ga0257161_1051972	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300026551\|Ga0209648_10042609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Aquicella → Aquicella siphonis	3920	Open in IMG/M
3300027512\|Ga0209179_1083284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	707	Open in IMG/M
3300027812\|Ga0209656_10019649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	4143	Open in IMG/M
3300027812\|Ga0209656_10098660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	1538	Open in IMG/M
3300027903\|Ga0209488_10127931	All Organisms → cellular organisms → Bacteria → Proteobacteria	1914	Open in IMG/M
3300027903\|Ga0209488_10228581	Not Available	1398	Open in IMG/M
3300027903\|Ga0209488_10677211	Not Available	741	Open in IMG/M
3300027903\|Ga0209488_10719347	Not Available	714	Open in IMG/M
3300027903\|Ga0209488_10888530	Not Available	625	Open in IMG/M
3300027903\|Ga0209488_10937287	Not Available	605	Open in IMG/M
3300028047\|Ga0209526_10681332	Not Available	649	Open in IMG/M
3300028536\|Ga0137415_10061265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	3629	Open in IMG/M
3300031543\|Ga0318516_10065619	Not Available	2003	Open in IMG/M
3300031561\|Ga0318528_10040769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	2321	Open in IMG/M
3300031573\|Ga0310915_10189935	Not Available	1434	Open in IMG/M
3300031682\|Ga0318560_10580046	Not Available	607	Open in IMG/M
3300031713\|Ga0318496_10748393	Not Available	539	Open in IMG/M
3300031719\|Ga0306917_11161032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	600	Open in IMG/M
3300031736\|Ga0318501_10853514	Not Available	506	Open in IMG/M
3300031820\|Ga0307473_11251038	Not Available	554	Open in IMG/M
3300031833\|Ga0310917_10782407	Not Available	645	Open in IMG/M
3300031879\|Ga0306919_11293727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	552	Open in IMG/M
3300031897\|Ga0318520_10811005	Not Available	587	Open in IMG/M
3300031941\|Ga0310912_10491237	Not Available	957	Open in IMG/M
3300031962\|Ga0307479_10861440	Not Available	880	Open in IMG/M
3300032180\|Ga0307471_102580539	Not Available	644	Open in IMG/M
3300032261\|Ga0306920_100353144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	2187	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.60%
Host-Associated	Host-Associated	2.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.40%
Aquatic	Environmental → Aquatic	3.20%
Plants	Host-Associated → Plants	2.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.40%
Freshwater	Environmental → Aquatic → Freshwater	3.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.40%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.00%
Loam	Environmental → Terrestrial → Soil → Loam	10.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.40%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.40%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	44.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1007495784	3300002245	Forest Soil	MSPQTAQAFLDGLPQMRTALRGSRHILGPVAFARHMHELDAEERDAEAILRRVQLRVVASTPFANKPPAPSAA
JGI25617J43924_102152502	3300002914	Grasslands Soil	MSAQTAQAFLDGLPRMRAALRDSRHVLGLVAYARHMHELDADESDAKAFLRRAQLRVVAGTAFKE*
JGI26341J46601_100122422	3300003219	Bog Forest Soil	MTRRLREKPMSPQTAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRTQLRVVAGTALDE*
JGI26340J50214_100070862	3300003368	Bog Forest Soil	MTRRLRENPMSPQTAQAFLDGLPGMRAALRNNRHILGPVAYARHMHELDTEERDAKAILRRTQLRVVAGTALDE*
Ga0070710_112007522	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	CRLREDPMNPQIAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERGAKAIRRRAQLRVVAGTALDE*
Ga0070711_1003242171	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSPQTAEAFLDSLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDE*
Ga0070698_1007734792	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRLHEEPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDG*
Ga0070697_1009966321	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRLHEDPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDANAILRRVQLRLVAGTAFDG*
Ga0066903_1009252453	3300005764	Tropical Forest Soil	MSPQTAQAFLAELPRIRAVLQNSRQILGPVEYARHMHELDVDERAAKAILKRAQFRVVAGTAFSG*
Ga0070717_107824582	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNPQTAQAFLDSLTRVRAALWDSRGILGPVTYARHMHELDADERAAKAVIRRAQIRVVAGTAFNG*
Ga0070715_104573862	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNPQIAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERGAKAIRRRAQLRVVAGTALDE*
Ga0070716_1015581182	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSPQIAQAFLDGLPRMRTALRDNRHILGPVAYARHMHELDADERDAKVILKRAQLRLVAGTALDG*
Ga0075434_1012845211	3300006871	Populus Rhizosphere	MTRRLREEPMSPQTARAFLDGLPRMRAALLNSRHILGPVTYARHMHELDIEERGAKAILRRTQLRVVAGTALDE*
Ga0075434_1017157911	3300006871	Populus Rhizosphere	MTRRLREEPMSPQTARAFLDGLPRMRAALLNSRRILGPVAYARHIHELDTEERDAKAILRRTQLRVVAGTALDE*
Ga0075434_1024745201	3300006871	Populus Rhizosphere	MSLHTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAILRRTQLRLVAGTALDE*
Ga0099793_101324093	3300007258	Vadose Zone Soil	MTRRHREAPMSPQTAQAFLDGLPRMQASLRDSRHVLGPVAYARHMHELDADERDAKAILRRAQLRLVAGTALDE*
Ga0099793_103336631	3300007258	Vadose Zone Soil	MTRRLHQDPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHDLDTEERDAKAIRRRAQLRVVAGTAFDE*
Ga0099795_102206212	3300007788	Vadose Zone Soil	MNPQIAQAFLDGLPRMRAALRDSRHVLGPVAYARHMHELDADERDAKAILRRAQLRVAAGTALDG*
Ga0099795_103912062	3300007788	Vadose Zone Soil	MTRRLHEDPMSPQTAQAFLDGLPRMRAALLNSRQILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDG*
Ga0099830_108874651	3300009088	Vadose Zone Soil	MSPQTAQTFLDGLPRMQAALRGSRHILGPVEYARHMHELDADERDAKAIRRRARLSVVAGTALNG*
Ga0099830_111429431	3300009088	Vadose Zone Soil	PEMTRRPREEPMSPQTAQAFLDGLPRMRAALLNSRQILGPVAYARHMHELDADERDAKAILTRARLRVVAGTALIG*
Ga0099827_107676633	3300009090	Vadose Zone Soil	MNPQIAQAFLDGLPRMRAALRDSRHVLGPVAYARHMHELYADERDAKAVLRRAQLRLVAGTAFDE*
Ga0099792_100533974	3300009143	Vadose Zone Soil	MTRRHREAPMSPQTAQAFLDGLPRTRAALLNGRHILGPVAYARHMHDLDTEERDAKAILRRAQLRVVAGTAVNR*
Ga0099792_100845873	3300009143	Vadose Zone Soil	MSPQTAQAFLEGLPRMRTALRDSRHILGPVAYARHMHELDADERDAKAILRRVQLRLVAGTAYSE*
Ga0099792_105841973	3300009143	Vadose Zone Soil	MTRRLHEEPMSPQTAEAFLDGLSRMRAALLNSRRILGPVAYARHMHELDADERGAKAILRRAQLRVAAGTALDD*
Ga0099792_108995031	3300009143	Vadose Zone Soil	MTRRPREEPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHEFDTEERDAKAIRRRAQLRVVAGTALDE*
Ga0126380_101687674	3300010043	Tropical Forest Soil	MTRRDREDPMSLQTAQAFLDGLPRMRAALRDNRHALGPVAYARHMHELDIDERDARAILRRAQLRVVAGTIFDE*
Ga0126384_100419096	3300010046	Tropical Forest Soil	MTRRNREDPMSLQTAQAFLDVLPRMRAALRDRRHVLGPVAYARHMHELDIDERDARAILRRAQLRVVAGTIFDE*
Ga0126384_122474491	3300010046	Tropical Forest Soil	VSPQTAQAFLAELPRIRAVLQDSRQILGPVEYARHMHELDVDERAAKAILKRAQFRVVAGTAFSG*
Ga0126373_105752852	3300010048	Tropical Forest Soil	MSPQTAQAFLAELPRIRAVLQDSRQILGPVEYARHMHELDVDERAAKAILKRAQFRVVAGTAFSG*
Ga0099796_102199632	3300010159	Vadose Zone Soil	MSPQIAQAFLDGLSPMRTALLNGRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDG*
Ga0126370_118759272	3300010358	Tropical Forest Soil	PPRRQAAPEMTRRDREDPMSLQTAQAFLDGLPRMRAALRDNRHALGPVAYARHMHELDIDERDARAILRRAQLRVVAGTVLDE*
Ga0126376_121151682	3300010359	Tropical Forest Soil	MTRRNREDPMSLQTAQAFLDVLPRMRAALRDDRHALGPVAYARHMHELDIDERDARAILRRAQLRVVAGTVLDE*
Ga0126372_122506102	3300010360	Tropical Forest Soil	MLAELGGADEPAETAKAFLDGLPEMRAALRDRRGILGPVAYARHMHELDADERDARAILRRAQLRIVAGTAVDE*
Ga0126377_109078004	3300010362	Tropical Forest Soil	MTRRNREDPMSLQTAQAFLDVLPRMRAALRDRRHVLGPVAYARHMHELDIDERDARAILRRAQ
Ga0126377_130446202	3300010362	Tropical Forest Soil	MTRRDREDPMSLQTAQAFLDGLPRMRAALRDNRHALGPVAYARHMHELDIDERDARAILRRAQLRVVAGTVLDE*
Ga0126381_1004815973	3300010376	Tropical Forest Soil	PPGRQTLPEPARDCREDAMSPQTAQAFLAELPRIRAVLQDSRQILGPVEYARHMHELDVDERAAKAILKRAQFRVVAGTAFSG*
Ga0137392_106942992	3300011269	Vadose Zone Soil	MSPQTAQAFLDGLPRMRAALRDSRRILGPVAYARHMHELDADERDAKAILRRARLSVVAGTALDG*
Ga0137392_107871602	3300011269	Vadose Zone Soil	MTRRLHEEPMSPQTAEAFLDGLSRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDD*
Ga0137392_110950682	3300011269	Vadose Zone Soil	SPQTAQAFLDGLPLMRAALLNSRRILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTARNG*
Ga0137391_104693211	3300011270	Vadose Zone Soil	MSPQTAQAFLDGLPRMRAVLLNSRRILGPVAYARHMHDLDTEERDAKAILRRAQFRVVAGTAFDE*
Ga0137393_112954182	3300011271	Vadose Zone Soil	MSPQTAQAFLDGLPRMRAALLNSRQILGPVAYARHMHELDADERDAKAILRRVQLRLVAGTAFDE*
Ga0137388_104834964	3300012189	Vadose Zone Soil	MSPQTAQAFLDGLPRMRAALGDSRHVLGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALNG*
Ga0137363_109532991	3300012202	Vadose Zone Soil	AAPEMTRRLHEEPMSPQTAEAFLDGLSRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDE*
Ga0137363_109885022	3300012202	Vadose Zone Soil	MTRRHREAPMSPQTAQAFLDGLPRTRAALLNGRHILGPVAYARHMHDLDTEERDAKAIRRRAQLRVIAGTALDG*
Ga0137362_103422023	3300012205	Vadose Zone Soil	MTRRHREDPMSPQTAQAFLDGLPRTRAALLNGRHILGPVAYARHMHDLDTEERDAKAILRRAQLRVVAGTAVNR*
Ga0137380_113828181	3300012206	Vadose Zone Soil	MTRRLHEDPMSPQTAEAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDARAILRRAQLRVIAGTALNG*
Ga0137378_115098522	3300012210	Vadose Zone Soil	MTRRPREEPMSPQTAQAFLDGLPRMRTALRERRRVLGPVAYARHMHELDADERDAKAILRRGQLRLVAGTAFDE*
Ga0137384_103845222	3300012357	Vadose Zone Soil	MNPQIAQAFLDGLPRMRTALRDNRHILGPVAYARNMHELDADERDAKAILRRGQLRLVAGTAFDE*
Ga0137360_117917212	3300012361	Vadose Zone Soil	EDPMSPPTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRDVAGTALDE*
Ga0137361_105622443	3300012362	Vadose Zone Soil	RLHEDPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDADERDAKAILRRARLHVVAGTAFDE*
Ga0137390_106211192	3300012363	Vadose Zone Soil	MNPQIAQAFLDGLPRMRTALRDNRHFLGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDE*
Ga0137390_114356252	3300012363	Vadose Zone Soil	MTRRPREEPMSPQTAQAFLDGLPRMRAALLNSRQILGPVAYARHMHELDADERDAKAILRRVQLRLVAGTAFDE*
Ga0137390_115130422	3300012363	Vadose Zone Soil	MNPQIAQAFLDGLPQMRTALRDSRHVLGPVAYARHMHELDADERDAKAILRRARLSVVAGTALNG*
Ga0137358_107996202	3300012582	Vadose Zone Soil	MTRRLHEEPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDE*
Ga0137397_104133754	3300012685	Vadose Zone Soil	MTRRLHEEPMSPQTAQAFLEGLPRMRTALRDNRHILGPIPYARHMHELDADERDAKAILRRAQLRLVAGTAVNG*
Ga0137395_109855161	3300012917	Vadose Zone Soil	MSPQTAEAFLDGLPRMRAALLNSRRILGPVAYARHMHELDNDERDAKAILRRAQLRVVAGTALDG*
Ga0137396_105359141	3300012918	Vadose Zone Soil	MSPQTAQALLDGLPRMRTALLNSRRIVGPVAYARHMHDLDTEERDAKAIRRRTQLRVVAGTALDD*
Ga0137396_108468382	3300012918	Vadose Zone Soil	MTRRPREEPMSPQTAQAFLDGLPQTRAALLNSRRILGPVAYARHMHELDTEECDAKAILRRTQLRVVAGTALDD*
Ga0137394_116093552	3300012922	Vadose Zone Soil	MTRRHREAPMSPQTAQAFLDGLPRTRAALLNGRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE*
Ga0137359_111527602	3300012923	Vadose Zone Soil	MTRRLHEEPMRPQIAQAFLDGLPRMRAALGDSRHVLGPVAYARHMHELDADERDAKALLRRARLRVVAGTALDE*
Ga0137413_110165872	3300012924	Vadose Zone Soil	MTRRLHEEPMSPQTAEAFLDGLSRMRAALLNSRRILGPVAYARHMHELDADERGAKAILRRAQLRVVAGTALDD*
Ga0137413_115683082	3300012924	Vadose Zone Soil	MTRRHREAPMSPQTAQAFLDGLPRTRAALLNGRHILGPVAYARHMHDLDTEERDAKAILRRAQLRVVAGTAVNG*
Ga0137413_117177012	3300012924	Vadose Zone Soil	MTRRHREAPMSPQTAQAFLDGLPRTRAALLSSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVIAGTALDG*
Ga0137419_118230672	3300012925	Vadose Zone Soil	MTRRLHEDPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDADERDAKAILRRAQLRLVAGTALDE*
Ga0137416_107834482	3300012927	Vadose Zone Soil	MNPQIAQAFLDGLPQMRTALRDNRHILGPVAYARHMHELDADERDAKATLRRAQLRVVAGTALDD*
Ga0137416_108904632	3300012927	Vadose Zone Soil	MSPQTAEAFLDGLPRMRAALLNSRRILGPVAYARHMHELDADERDAKALLRRARLRVVAGTALDE*
Ga0137416_111399172	3300012927	Vadose Zone Soil	MTRRLHEEPMSPQTAQAFLEGLPRMRTALRDSRHILGPVAYARHMHEFDADERDAKAILRRVQLRLVAGTAFDE*
Ga0137410_113341782	3300012944	Vadose Zone Soil	MTRRLHEEPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHEFDTEERDAKAIRRRAQLRVVAGTALDE*
Ga0164305_112742882	3300012989	Soil	MTRRLHEEPMSPQTAQAFLDGLPRMRAALLNSRQILGPVAYARHMHELDTDERDAKAILRRAQIRVVAGTALDE*
Ga0137412_100898192	3300015242	Vadose Zone Soil	MTRRLHEEPMSPQTAEAFLDGLSRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVIAGTALDG*
Ga0137409_100458133	3300015245	Vadose Zone Soil	MTRRLHEEPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAILRRTQLRVVAGTALDE*
Ga0182036_117191901	3300016270	Soil	RRLPEEPMSPQTAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE
Ga0182041_109921942	3300016294	Soil	AAALSLHRPPRRQATPEMTRRRPVVLMSPQSAWAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE
Ga0182033_101918562	3300016319	Soil	MSPQTAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE
Ga0182032_105397482	3300016357	Soil	MSPQTAQAFLDGLPRMRAALGDSRRILGPVAYARHLHELDADERDAKAILRRAQLRVVAGTAFNG
Ga0182040_111999653	3300016387	Soil	MSPQTARAFLDGLPRVRAALGDSRRILGPVAYARHMHELDADERDAKAILRRAQLRVVAGEAFNG
Ga0066662_122232492	3300018468	Grasslands Soil	MSPQTAQAFLDGLPRTRAALLNGRHVLGPVAYARHMHELDADERDAKAILRRVQLRLVAGTAFDE
Ga0179592_104387293	3300020199	Vadose Zone Soil	MTRRLHEDPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRA
Ga0210407_110871251	3300020579	Soil	MSPQTAQAFLDGLPQMRTALRDNRHILGPVAYARHMHELDAEERDAKAIRRRAQLRVVAGTALDE
Ga0210407_111512251	3300020579	Soil	MSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRLVA
Ga0210399_105282582	3300020581	Soil	MSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDE
Ga0210404_104420371	3300021088	Soil	MTRRLHEDPMSPQTAQAFLDGLPRMRAALRGSRHILNPVAYARHMHELDADEREAKAILRRAQLRLVAW
Ga0210400_101467646	3300021170	Soil	MSPQTAQAFLDGLPRMQAALRDNRHVLGPIAYARHMHELDADERDAKAILRRAQLRVVAGTALDG
Ga0210400_105403873	3300021170	Soil	MSPQTAQAFLEGLPQMRAALLNSRQIFGPVAYARHMHELDTEERDANAILRRAQLRVVAGTALDE
Ga0210408_113391311	3300021178	Soil	MSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDARAILRRAQLRVIAGTALDE
Ga0210408_114166001	3300021178	Soil	MSPQAAQALLDGLPQMRTALRGSRHILSPVEYARHMHELDADERDAKAILRRAQLRVVAGTACSE
Ga0210394_114398451	3300021420	Soil	MSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDADERDAQAILRRARLRVIAGTH
Ga0210384_111312752	3300021432	Soil	MSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVIAGTALDG
Ga0210410_111979021	3300021479	Soil	MNPQIAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDE
Ga0210409_116790191	3300021559	Soil	MTRRLHEEPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRLVAGTALDG
Ga0126371_103159234	3300021560	Tropical Forest Soil	MSPQTAQAFLAELPRIRAVLQDSRQILGPVEYARHMHELDVDERAAKAILKRAQFRVVAGTAFSG
Ga0126371_114995492	3300021560	Tropical Forest Soil	MNPQAAQALLESLPEMRAALRDRRGALGPVAYARHMHDLDVDERDARAILRRTQLRIVAGTAVDE
Ga0207693_100171284	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNPQIAQAFLDGLPRMRAALLNSRRILGPIAYARHMHDLDTDERDAKAIVRRAQFHVVAGIALDE
Ga0207693_107299533	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	REYPMNPQIAQAFLDGLPRMRTALLNSRRILGPVAYARHMHELDAEERDAKAIRRRAQLRVVAGTALDE
Ga0207700_114103341	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EDPMSPQTAEAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERGAKAIRRRAQLRLVAGTAVNG
Ga0257161_10519722	3300026508	Soil	PPRPEAAPEMTRRLHEDPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDE
Ga0209648_100426094	3300026551	Grasslands Soil	MSAQTAQAFLDGLPRMRAALRDSRHVLGLVAYARHMHELDADESDAKAFLRRAQLRVVAGTAFKE
Ga0209179_10832842	3300027512	Vadose Zone Soil	MSPQTAQAFLDGLPRTRAALLNGRHILGPVAYARHMHELDNEERDAKAIRRRAQLRVVAGTALDD
Ga0209656_100196492	3300027812	Bog Forest Soil	MTRRLRENPMSPQIAQAFLDGLPGMRAALRANRHILGPVVYARHMHELDADEHDATAILRRAQLRIVAGTAFSE
Ga0209656_100986602	3300027812	Bog Forest Soil	MTRRLREKPMSPQTAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRTQLRVVAGTALDE
Ga0209488_101279313	3300027903	Vadose Zone Soil	MSPHTARAFLDGLPPMRAAIRDSRHVLGPVVYARHMHELDADERDAKATLRRAQLRVVAGTTVNG
Ga0209488_102285812	3300027903	Vadose Zone Soil	MSPQIAQAFLDGLSQMRTALLNGRHILGPVAYARHMHDLDTEERDAKAILRRAQLRVVAGTALDG
Ga0209488_106772111	3300027903	Vadose Zone Soil	MSPQTAQAFLDGLPRMRAALGDSRHVLGPVAYARHMHELDADERDAKAILRRAQLRLVAGTAFNG
Ga0209488_107193471	3300027903	Vadose Zone Soil	MTRRLHEEPMSPQTAEAFLDGLSRMRAALLNSRRILGPVAYARHMHELDADERGAKAILRRAQLRVVAGTA
Ga0209488_108885303	3300027903	Vadose Zone Soil	MSPHTAQAFLDGLPRMRAALRDSRHVLGPVAYARHMHELDADERDAKATLRRARLRVV
Ga0209488_109372872	3300027903	Vadose Zone Soil	MSPQTAQAFLEGLPRMRTALRDSRHILGPVAYARHMHELDADERDAKAILRRAQLRVAAGTALDG
Ga0209526_106813321	3300028047	Forest Soil	MSPQTAQAFLDGLPRMRAALLNRRRILGPVAYARHMHELDTEERDAKAIRRRAQLRLVAGTALDG
Ga0137415_100612652	3300028536	Vadose Zone Soil	MTRRLHEDPMSPQTAQAFLDGLPRMRAALLNSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDG
Ga0318516_100656194	3300031543	Soil	MSPQTARAFLDGLPRVRAALGDSRRILGPVAYARHMHELDADERDAKAILRRAQLRVVAGTAFNG
Ga0318528_100407693	3300031561	Soil	MSPQTAQAFLDGLPRMRAALGDSRCILGPVAYARHMHELDADERDAKAILRRAQLRVVAGTAFNG
Ga0310915_101899353	3300031573	Soil	MTRRLHQASMSPQAAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE
Ga0318560_105800462	3300031682	Soil	PEMTRRLHQASMSPQAAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE
Ga0318496_107483931	3300031713	Soil	MSPQTAQAFLDGLPRMRAALLNRVASSARSPMPRHRHELDTEERDAKVILRRAQLRVVAGTALDE
Ga0306917_111610322	3300031719	Soil	MSPQTAQAFLDGLPRMRAALEDSRRILGPVAYARHMHELDADERDATAILRRAQLRVVAGEAFNG
Ga0318501_108535142	3300031736	Soil	MSPQTAQAFLDGLPRMRAALGDSRRILGPVAYARHMHELDADERDAKAILRRAQLRVVAGEAFNG
Ga0307473_112510381	3300031820	Hardwood Forest Soil	MTRRLHEDPMSPQTAQAFLDGLPRMRAALLNSRCSLGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDG
Ga0310917_107824072	3300031833	Soil	TAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALD
Ga0306919_112937272	3300031879	Soil	ARRFAEDTMSPQTAQAFLDGLPRMRAALEDSRRILGPVAYARHMHELDADERDATAILRRAQLRVVAGEAFNG
Ga0318520_108110052	3300031897	Soil	MSPQTAQAFLDGLPRMRAALGDSRRILGPVAYARHMHELDADERDAKAILRRAQLRVVAGTAFNG
Ga0310912_104912371	3300031941	Soil	MTRRLHQASMSPQAAQAFLDGLPRMRAALFNSRRIFGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE
Ga0310913_110095191	3300031945	Soil	FLDGLPRMRAALGDSRRILGPVAYARHMHELDADERDAKAILRRAQLRVVAGEAFNG
Ga0307479_108614401	3300031962	Hardwood Forest Soil	MSPQTAQAFLDGLPRMRAVLRDSRHILGPVAYARHMNELDADEHDAQAALRRAQLRVVAGTAVDG
Ga0307471_1025805392	3300032180	Hardwood Forest Soil	MTRRLHEDPMSPQTAQAFLDGLPRMRAALLKSRRILGPVAYARHMHELDTEERDAKAIRRRAQLRVVAGTALDE
Ga0306920_1003531443	3300032261	Soil	MSPQAAQAFLDGLPRMRAALLNSRHILGPVAYARHMHELDTEERDAKAILRRAQLRVVAGTALDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068176

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences