NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F068158

Metagenome / Metatranscriptome Family F068158

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F068158
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 66 residues
Representative Sequence MKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKEISAVGEKEKDESAASKPKNTEAA
Number of Associated Samples 94
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 88.80 %
% of genes near scaffold ends (potentially truncated) 14.40 %
% of genes from short scaffolds (< 2000 bps) 85.60 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (68.800 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(13.600 % of family members)
Environment Ontology (ENVO) Unclassified
(31.200 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.400 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88
1deeps_02083430
2C688J18823_109588242
3JGIcombinedJ26739_1001039253
4C688J35102_1189537551
5C688J35102_1204411942
6soilH1_103663593
7soilH2_102967552
8Ga0062595_1004517811
9Ga0062595_1010169111
10Ga0058863_116407721
11Ga0058862_128498922
12Ga0066690_103379652
13Ga0070683_1001429582
14Ga0070683_1010091953
15Ga0070692_100960331
16Ga0070692_106883233
17Ga0070709_107316222
18Ga0070709_107775371
19Ga0070709_108937591
20Ga0070709_111077741
21Ga0070714_1003789241
22Ga0070714_1013535432
23Ga0070714_1016167181
24Ga0070711_1001173542
25Ga0070681_103314334
26Ga0070681_107974092
27Ga0070699_1006936451
28Ga0070679_1006414832
29Ga0070679_1009277731
30Ga0070734_100045218
31Ga0070732_100458654
32Ga0070732_100633734
33Ga0068855_1021178972
34Ga0066703_103036812
35Ga0066703_106714681
36Ga0066702_100982213
37Ga0068857_1007822742
38Ga0068866_110025992
39Ga0068851_100999512
40Ga0070717_101237342
41Ga0070717_111208331
42Ga0070715_108030651
43Ga0070716_1009749042
44Ga0070712_1006915412
45Ga0099795_100701592
46Ga0099830_118828411
47Ga0105240_119898581
48Ga0105245_1000079717
49Ga0105245_106835053
50Ga0099792_106901632
51Ga0105237_109508673
52Ga0099796_100604892
53Ga0134125_100194544
54Ga0134125_121348252
55Ga0134128_102279012
56Ga0134128_108760401
57Ga0105239_105071872
58Ga0105239_113239582
59Ga0134124_109764572
60Ga0150983_126703802
61Ga0150983_136954802
62Ga0150983_153484471
63Ga0126317_104921173
64Ga0137360_114484911
65Ga0150984_1062802593
66Ga0137419_107902361
67Ga0137404_120946361
68Ga0164300_106795552
69Ga0164298_102604681
70Ga0164298_108011401
71Ga0164299_112028173
72Ga0164301_100896492
73Ga0164302_107892252
74Ga0164309_105513771
75Ga0164308_103542892
76Ga0164304_103283531
77Ga0164304_107131802
78Ga0164305_100614013
79Ga0157369_102187142
80Ga0157369_111987962
81Ga0157374_116169492
82Ga0157372_117108262
83Ga0137405_11393753
84Ga0066662_100932252
85Ga0137408_11032596
86Ga0197907_106766931
87Ga0206349_10535631
88Ga0206355_10572301
89Ga0179590_10118123
90Ga0210400_100370013
91Ga0224712_104509753
92Ga0224712_105844181
93Ga0207656_101931362
94Ga0207656_102094843
95Ga0208078_10043715
96Ga0207642_104376843
97Ga0207699_110191142
98Ga0207707_102386551
99Ga0207707_103707481
100Ga0207707_111214732
101Ga0207695_113113292
102Ga0207695_116476622
103Ga0207652_105508792
104Ga0207694_103378581
105Ga0207694_103991991
106Ga0207687_100013073
107Ga0207700_100142493
108Ga0207665_102585801
109Ga0207665_111707453
110Ga0207661_105499421
111Ga0209647_11107292
112Ga0179587_103856782
113Ga0209527_10312561
114Ga0208988_11665411
115Ga0209060_100067375
116Ga0209580_100141114
117Ga0209580_101057443
118Ga0209488_102767182
119Ga0075371_102539721
120Ga0073994_121630112
121Ga0170834_1035086361
122Ga0170822_115220452
123Ga0170820_154391612
124Ga0170819_134019662
125Ga0308175_1006295143
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.08%    β-sheet: 0.00%    Coil/Unstructured: 72.92%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060MKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKEISAVGEKEKDESAASKPKNTEAASequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
68.8%31.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Surface Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Sugarcane Root And Bulk Soil
Arctic Peat Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Host-Associated
Corn Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Avena Fatua Rhizosphere
8.8%9.6%4.0%4.8%4.0%3.2%3.2%4.8%13.6%8.8%4.0%6.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_020834302199352024SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLEMNAGARTPQPHSDTTAEQKQDNQASEPKETKAA
C688J18823_1095882423300001686SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGAGTLHPAKDNAASEKEKAESPAGKPEKAA*
JGIcombinedJ26739_10010392533300002245Forest SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLELNAGARTLQPSPSATVAEKTEKEAKEPENAEAA*
C688J35102_11895375513300002568SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKAESPAGKPEKAA*
C688J35102_12044119423300002568SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTPHASKEISAKEKTENAAGDVKDTKAA*
soilH1_1036635933300003321Sugarcane Root And Bulk SoilMKVTSDRIKARAQQLRNNGFKLSSSMVRSTLKMNAGARTLQSPKNASSKEKTEKAASDPQKTEAA*
soilH2_1029675523300003324Sugarcane Root And Bulk SoilMKVTSDRIKARAQQLRNNGFKLSSSMVRSTLEMNAGARTLQSPKNASSKEKTEKAASDPQKNEAA*
Ga0062595_10045178113300004479SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPQKEASVGEKEKTESAANKPEKNKAA*
Ga0062595_10101691113300004479SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKTENPADKPEKAA*
Ga0058863_1164077213300004799Host-AssociatedMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHSSKDTAVKEKDNAEKSASKPENTEAA*
Ga0058862_1284989223300004803Host-AssociatedVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKAESSAGKPEKAA*
Ga0066690_1033796523300005177SoilMKVTSDRIKARAQQLRNNGFKLSGNMVRSTLEMNAGARTLHSQKETSTVGEKEKAESAATKPKNTEAA*
Ga0070683_10014295823300005329Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQSSKDPAVKEKDNAEKSASKPENTEAA*
Ga0070683_10100919533300005329Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPGKEISAGGEKEKDESAASKPKNTEAA*
Ga0070692_1009603313300005345Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKEISAVGEKEKDESAASKPKNTEAA*
Ga0070692_1068832333300005345Corn, Switchgrass And Miscanthus RhizosphereMKVTSDQIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPAKDNAASEKEKTESSASKPEKAA*
Ga0070709_1073162223300005434Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAAGEKEKTENPAGKPEKAA*
Ga0070709_1077753713300005434Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLKNNGFKLSSSMVRSTLELNAGARALQSPKGTSSKEKTENAASDPKKNEAA*
Ga0070709_1089375913300005434Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAEQLRNGGFRLSGSMIRKTLEMNAGARTQISANATVQEKEKEAAIGKPAQEKAEAA*
Ga0070709_1110777413300005434Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSTVGEKEKAESAATRPKDTEAA*
Ga0070714_10037892413300005435Agricultural SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKESSTVGEKEETESAASKPKNTEAA*
Ga0070714_10135354323300005435Agricultural SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPQKETSVAEKEKTEKAANNPEKTEAA*
Ga0070714_10161671813300005435Agricultural SoilMKVTSDQIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAAGEKEKTENPAGKPEKAA*
Ga0070711_10011735423300005439Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSTVGEKEKAESAATMPKDTEAA*
Ga0070681_1033143343300005458Corn RhizosphereMKVSSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPAKDNAASEKEKTESSASKPEKAA*
Ga0070681_1079740923300005458Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSAVGEKEKTDSAASKPKDTEAA*
Ga0070699_10069364513300005518Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPQKEAKEASVGEKEKTESAADKPEKNEAA*
Ga0070679_10064148323300005530Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSAVREKEKTDSAASKPKDTEAA*
Ga0070679_10092777313300005530Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKAESSAGKPEKAA*
Ga0070734_1000452183300005533Surface SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQPRKETSVGEKEKTESTASKPDGKEAA*
Ga0070732_1004586543300005542Surface SoilMKVTSDRIKARAQQLRNNGFKISGSMVRSTLELNAGARTLHPPKETSVAEKEKTESVANNPEKTEAA*
Ga0070732_1006337343300005542Surface SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLEMNAGARTLHPQKETSAVGEKEKAESNAGKPKNTEAA*
Ga0068855_10211789723300005563Corn RhizosphereMKVTSDQIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKAESSAGKPEKAA*
Ga0066703_1030368123300005568SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHSQKETSTVGEKEKAESAATKPKNTEAA*
Ga0066703_1067146813300005568SoilMKVTSDRIKARAQQLRNNGFKLSGNMVRSTLEMNAGARTLQSPKEASVTEKEKTENPASKPEKTEAA*
Ga0066702_1009822133300005575SoilMKVTSDRIKARAQQLRNNGFKLSGNMVRSTLEMNAGARTLQSPKEASVTEKEKAESTASKPGKTEAA*
Ga0068857_10078227423300005577Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDSAASEKEKAESPAGKPEKAA*
Ga0068866_1100259923300005718Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPAKDNAASEKEKTESSASKPEKAA*
Ga0068851_1009995123300005834Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPGKEISAGGEKEKTEKDESAASKPKNTEAA*
Ga0070717_1012373423300006028Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSTVGEKEKAESAASRPKDTEAA*
Ga0070717_1112083313300006028Corn, Switchgrass And Miscanthus RhizosphereIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKENSAVGEKEKTESAASKPENTEAA*
Ga0070715_1080306513300006163Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLKNNGFKLSSSMVRSTLELNAGARTLQSPKGTSSKEKTENAASDPKKNEAA*
Ga0070716_10097490423300006173Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHSQKETSTVGEKEKAESAASRPKDTEAA*
Ga0070712_10069154123300006175Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKTENPAGKPEKAA*
Ga0099795_1007015923300007788Vadose Zone SoilMKVTSDRIKARAQQLRNNGFRLSGNMVRSTLELNAGARTLPPSTTAIVPEKTENQANEPENAEAA*
Ga0099830_1188284113300009088Vadose Zone SoilMKVTSDRIKARAQQLRNNGFRLSGNMVRSTLELNAGARTLQPSTTAIVPEKTENQANEPENAEAA*
Ga0105240_1198985813300009093Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQSSNKETSVGEKEKSAGSKPEKTEAA*
Ga0105245_10000797173300009098Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSAVGEEEKAESAATKQKDTEAA*
Ga0105245_1068350533300009098Miscanthus RhizosphereWTYKRNFGMKVTSDQIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKTENPADKPEKAA*
Ga0099792_1069016323300009143Vadose Zone SoilMKVTSDRIKARAQQLRNNGFKLSDSMVRSTLEMNAGASTLHTPKDGAASEKEKTEKSTT
Ga0105237_1095086733300009545Corn RhizosphereYKGILAMKVTSDQIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKTENPADKPEKAA*
Ga0099796_1006048923300010159Vadose Zone SoilMKVTSDRIKARAQQLRNNGFRLSGNMVRSTLELNAGARTLPPSTTAIVPKKTENQANEPENAEAA*
Ga0134125_1001945443300010371Terrestrial SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHAPKDTSAKEKGKTESFTSKPEKAA*
Ga0134125_1213482523300010371Terrestrial SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTPHPSKDISAKEKAENGAADPKKNEAA*
Ga0134128_1022790123300010373Terrestrial SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQSSKDTAVKEKDNEEKSVSKPENTEAA*
Ga0134128_1087604013300010373Terrestrial SoilIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKPGPDTKPEKAA*
Ga0105239_1050718723300010375Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPAKDNAATSEKEKTESSASKPEKAA*
Ga0105239_1132395823300010375Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHSSKDPAVKEKDNAEKSASKPENTEAA*
Ga0134124_1097645723300010397Terrestrial SoilMKVTSDRIKARAQQLKNNGFKLSSSMVRSTLELNAGARALQSPKGTSSKEKTENAASDPKKTEAA*
Ga0150983_1267038023300011120Forest SoilMKVTSDRIKARAQQLRNNGFRLSGNMVRSTLELNAGARTLQPSTTATVPEKTENQANEPENAEAA*
Ga0150983_1369548023300011120Forest SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLQPAKENSAKEKTENAANDQKKAEAA*
Ga0150983_1534844713300011120Forest SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLELNAGARTLQPPTAAAVPEKSENQEIKPENAKAA*
Ga0126317_1049211733300011332SoilMKVTSDRIKARAEQLRNGGFRLSGNMVRKTLEMNAGARTQISPKAAAQEKEAENRESAPKKAEAA*
Ga0137360_1144849113300012361Vadose Zone SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLELNAGARTLRPPTEATIAKKNEDQENEPENAEAA*
Ga0150984_10628025933300012469Avena Fatua RhizosphereMKVTSDRIKARAQQLRNNGFKLSGNMVRSTLEMNAGARTLQSPKEASVTEKEKTESPASKPEKTEAA*
Ga0137419_1079023613300012925Vadose Zone SoilMKVTSDRIKARAQQLKNNGFKLSSSMVRSTLELNAGARALHPAKEASATEKTENAASDRKNTKAA*
Ga0137404_1209463613300012929Vadose Zone SoilKARAQQLRNNGFRLSGNMVRSTLELNAGARTLQPSTTATVPEKTENQANEPENAEAA*
Ga0164300_1067955523300012951SoilMKVTSDRIKARAQQLKNNGFKLSSSMVRSTLELNAGARALQSPKGTPSKEKTENAASDPKKNEAA*
Ga0164298_1026046813300012955SoilIFGMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQSSKDPAVKEKDNAEKSASKPENTEAA*
Ga0164298_1080114013300012955SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLEMNAGARTPQPHSDTAAEQKPDNQVSEPRETKAA*
Ga0164299_1120281733300012958SoilSGMKVTAYRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSAVGEEEKAESAATKQKDTEAA*
Ga0164301_1008964923300012960SoilMKVTSDRIKARAQQLKNNGFKLSSSMVRSTLELNAGARALQSPKSTSSKEKTENAASDPKKNEAA*
Ga0164302_1078922523300012961SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLEMNAGARTPQPHSDTAAEQKPDNQVSEPKETKAA*
Ga0164309_1055137713300012984SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLEMNAGARTPQPHSDTTTEQKQDNQASEPEETKAA*
Ga0164308_1035428923300012985SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLEMNAGARTPQPHRDTAAEQKPDNQVSEPRETKAA*
Ga0164304_1032835313300012986SoilMKVTSDRIKARAQQLKNNGFKLSSSMVRSTLELNAGARALQSPKGTSSKEKAENAASDPKNTKAA*
Ga0164304_1071318023300012986SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSAVGEEEKAESAATKQKNTEAA*
Ga0164305_1006140133300012989SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKTENPAGKPDKAA*
Ga0157369_1021871423300013105Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLNPQKETSAVGEKEKTDSAASKPKDTEAA*
Ga0157369_1119879623300013105Corn RhizosphereGMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQSSKDPAVKEKDNAEKSASKPENTEAA*
Ga0157374_1161694923300013296Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSTVGEEEKTESAATKQKDTEAA*
Ga0157372_1171082623300013307Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKPGPDTKPEKAA*
Ga0137405_113937533300015053Vadose Zone SoilNSKLAKEFEMKVTSDRIKARAQQLRNNGFRLSGNMVRSTLELNAGARTLQPSTTATVPEKTENQANEPENAEAA*
Ga0066662_1009322523300018468Grasslands SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHSQKETSTVGEKEKTESAATKPKNTEAA
Ga0137408_110325963300019789Vadose Zone SoilMKVTSDRIKARAQQLRNNGFRLSGNMVRSTLELNAGARTLQPSTTATVPEKTENQANEPENAEAA
Ga0197907_1067669313300020069Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHSSKDTAVKEKDNAEKSASKPENTEAA
Ga0206349_105356313300020075Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKAESSAGKPEKAA
Ga0206355_105723013300020076Corn, Switchgrass And Miscanthus RhizosphereRIFGMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDSAASEKEKAESPAGKPEKAA
Ga0179590_101181233300020140Vadose Zone SoilMKVTSDRIKARAQELRNNGFRLSGHMVRSTLELNAGARTLQPRSDTDIPEKTENQINEPENAEAA
Ga0210400_1003700133300021170SoilMKVTSDRIKARAQQLRDNGFRLSGNMVRSTLELNAGARTLQPSPTATVPEKTEKQASEPENAEAA
Ga0224712_1045097533300022467Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDSAASEKEKAESSAGKPEKAA
Ga0224712_1058441813300022467Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHAPKDTSAKEKGKTESFTSKPEKAA
Ga0207656_1019313623300025321Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPGKEISAGGEKEKTEKDESAASKPKNTEAA
Ga0207656_1020948433300025321Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDSAASEKEKAESPAGKPEKAA
Ga0208078_100437153300025544Arctic Peat SoilMKVTSDRIKARAQQLRSNGFRLSGNMVRSTLELNAGARTLQPSSDTKAQEKTADLANEPENAEAA
Ga0207642_1043768433300025899Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAASEKEKTENPADKPEKAA
Ga0207699_1101911423300025906Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPAKDNAAGEKEKTENPAGKPEKAA
Ga0207707_1023865513300025912Corn RhizospherePSWTHKGIFGMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHSSKDPAVKEKDNAEKSASKPENTEAA
Ga0207707_1037074813300025912Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSAVGEKEKTDSAASKPKDTEAA
Ga0207707_1112147323300025912Corn RhizosphereMKVSSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPAKDNAASEKEKTESSASKPEKAA
Ga0207695_1131132923300025913Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQSSNKETSVGEKEKSAGSKPEKTEAA
Ga0207695_1164766223300025913Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQSSKDTAVKEKDNEEKSVSKPENTEAA
Ga0207652_1055087923300025921Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSAVREKEKTDSAASKPKDTEAA
Ga0207694_1033785813300025924Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPGKEISAGGEKEKDESAASKPKNTE
Ga0207694_1039919913300025924Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHSSKDTAVKEKDNAEKSASKPENTE
Ga0207687_1000130733300025927Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSAVGEEEKAESAATKQKDTEAA
Ga0207700_1001424933300025928Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPEKEITIGEKEKAESAATKPKNTEAA
Ga0207665_1025858013300025939Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHPQKETSTVGEKEKAETAASKLKSTEAA
Ga0207665_1117074533300025939Corn, Switchgrass And Miscanthus RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLQPTKENSANEKTENAANDQKKAEAA
Ga0207661_1054994213300025944Corn RhizosphereMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQSSKDPAVKEKDNAEKSASKPENTEAA
Ga0209647_111072923300026319Grasslands SoilMKVTSDRIKARAQQLRNNGFRLSGNMVRSTLELNAGARTLQPSTTAIVPEKTENQANEPENAEAA
Ga0179587_1038567823300026557Vadose Zone SoilMKVTSDRIKARAQQLRSNGFRLSGNMVRSTLELNAGARTLQTTSDATAQEKTENQASEPESAKAA
Ga0209527_103125613300027583Forest SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLELNAGARTLQPSPSATVAEKTEKEAKEPENAEAA
Ga0208988_116654113300027633Forest SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLELNAGARTLQPSPTATAPEKTKKEANE
Ga0209060_1000673753300027826Surface SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLQPRKETSVGEKEKTESTASKPDGKEAA
Ga0209580_1001411143300027842Surface SoilMKVTSDRIKARAQQLRNNGFKISGSMVRSTLELNAGARTLHPPKETSVAEKEKTESVANNPEKTEAA
Ga0209580_1010574433300027842Surface SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLEMNAGARTLHPQKETSAVGEKEKAESNAGKPKNTEAA
Ga0209488_1027671823300027903Vadose Zone SoilMKVTSDRIKARAQQLRNNGFRLSGNMVRSTLELNAGARTLPPSTTAIVPEKTENQANEPENAEAA
Ga0075371_1025397213300030974SoilMKVTSDRIKARAQQLRNGGFRLSGNMVRKTLEMNAGARTRISSTDVAVEEKETENRESAQKKAEAA
Ga0073994_1216301123300030991SoilMKVTSDRIKARAQQLRNNGFRLSGSMVRSTLELNAGARTLQPSPTATAPEKTENQANEPKNVEAA
Ga0170834_10350863613300031057Forest SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLHPAKDNPASEKEKTESSVNKPEKAA
Ga0170822_1152204523300031122Forest SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLQPAKENSAKEKTENAANDQKKTEAA
Ga0170820_1543916123300031446Forest SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLQPTKENSAKEKTENAASDQKKTEAA
Ga0170819_1340196623300031469Forest SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLELNAGARTLQPTKENSAKEKTENAANDQKKNEAA
Ga0308175_10062951433300031938SoilMKVTSDRIKARAQQLRNNGFKLSGSMVRSTLEMNAGARTLHGSKDTAVKEKDNAEKSASKPENTEAA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.