Metagenome Family F067971

Basic Information
Family ID	F067971
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	67 residues
Representative Sequence	MNMNQIMYDLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM
Number of Associated Samples	95
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.40 %
% of genes near scaffold ends (potentially truncated)	28.80 %
% of genes from short scaffolds (< 2000 bps)	82.40 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (65.600 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.400 % of family members)
Environment Ontology (ENVO)	Unclassified (27.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.000 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1ARSoilOldRDRAFT_0259122 2INPhiseqgaiiFebDRAFT_1050118581 3AP72_2010_repI_A100DRAFT_10488392 4JGI11615J12901_101270541 5Ga0062590_1025998101 6Ga0062594_1021780951 7Ga0065704_103775232 8Ga0065712_100753284 9Ga0065715_100971751 10Ga0065715_102223853 11Ga0065715_102450983 12Ga0065705_100208343 13Ga0070658_102831333 14Ga0066388_1020624452 15Ga0066388_1022883811 16Ga0068869_1004117031 17Ga0070666_102344931 18Ga0068868_1002545613 19Ga0070694_1011931111 20Ga0070678_1000078677 21Ga0070662_1008942561 22Ga0070679_1002643162 23Ga0070679_1004340472 24Ga0070664_1000859995 25Ga0066903_1007283115 26Ga0066903_1041193872 27Ga0068863_1006948461 28Ga0070712_1012365242 29Ga0079222_100269494 30Ga0079221_100116184 31Ga0079221_116951231 32Ga0075428_1015064731 33Ga0075431_1019287842 34Ga0075433_107574332 35Ga0075425_1003015673 36Ga0068865_1011880102 37Ga0075426_106560081 38Ga0079219_115779882 39Ga0075435_1011410173 40Ga0111539_100330989 41Ga0111539_108167081 42Ga0075418_126931412 43Ga0114129_108522612 44Ga0114129_111425473 45Ga0105243_108596273 46Ga0111538_101085041 47Ga0105241_104373861 48Ga0105242_101052981 49Ga0105249_119802341 50Ga0126374_118059331 51Ga0126373_120025112 52Ga0126370_101378882 53Ga0126372_118833571 54Ga0126379_101249903 55Ga0126379_105033201 56Ga0126381_1028382972 57Ga0134124_113924942 58Ga0124850_10413371 59Ga0157327_10322471 60Ga0157354_10054072 61Ga0157297_100208103 62Ga0157310_103732431 63Ga0126369_101514491 64Ga0126369_107508311 65Ga0164308_103339491 66Ga0157378_102028694 67Ga0132258_100731767 68Ga0132258_101121265 69Ga0132258_104731231 70Ga0132258_106856411 71Ga0132258_108807233 72Ga0132258_111996471 73Ga0132256_1005499893 74Ga0132256_1007511894 75Ga0132256_1012026992 76Ga0132257_1004602772 77Ga0132257_1018547131 78Ga0132255_1007051424 79Ga0132255_1016089011 80Ga0132255_1017110341 81Ga0182041_109877582 82Ga0182032_116152261 83Ga0182034_102863291 84Ga0182038_106213831 85Ga0173482_100871492 86Ga0126371_102395514 87Ga0126371_111024351 88Ga0126371_117826842 89Ga0126371_133540462 90Ga0207682_105670331 91Ga0207688_102951992 92Ga0207688_103375031 93Ga0207705_105010961 94Ga0207671_103587923 95Ga0207693_112431051 96Ga0207701_100444112 97Ga0207701_101051204 98Ga0207706_100284213 99Ga0207706_103128981 100Ga0207669_105216331 101Ga0207679_102845573 102Ga0207668_106541182 103Ga0207648_107770572 104Ga0207683_1000023751 105Ga0207698_119134451 106Ga0208475_10264321 107Ga0209178_10532721 108Ga0209073_100503363 109Ga0209177_100065662 110Ga0209177_104019722 111Ga0209074_100615113 112Ga0209074_103601521 113Ga0209074_104674032 114Ga0209811_103957942 115Ga0207428_103527331 116Ga0310813_107004622 117Ga0310813_118934651 118Ga0306923_119093991 119Ga0306921_110625702 120Ga0310912_103849751 121Ga0306926_124549851 122Ga0306922_111381552 123Ga0310897_103908343 124Ga0310895_104710493 125Ga0310810_102612284
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1ARSoilOldRDRAFT_0259122 2INPhiseqgaiiFebDRAFT_1050118581 3Ga0070658_102831333 4Ga0066388_1020624452 5Ga0070662_1008942561 6Ga0066903_1007283115 7Ga0114129_108522612 8Ga0132255_1017110341 9Ga0126371_133540462 10Ga0208475_10264321
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1ARSoilOldRDRAFT_0259122 2INPhiseqgaiiFebDRAFT_1050118581 3Ga0070658_102831333 4Ga0066388_1020624452 5Ga0070662_1008942561 6Ga0066903_1007283115 7Ga0114129_108522612 8Ga0132255_1017110341 9Ga0126371_133540462 10Ga0208475_10264321
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.24% β-sheet: 0.00% Coil/Unstructured: 11.76%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF12728	HTH_17	12.00
PF00528	BPD_transp_1	7.20
PF13551	HTH_29	1.60
PF01510	Amidase_2	1.60
PF14659	Phage_int_SAM_3	0.80
PF00072	Response_reg	0.80
PF03354	TerL_ATPase	0.80
PF13683	rve_3	0.80
PF14437	MafB19-deam	0.80
PF04972	BON	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.80
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	34.40 %
Unclassified	root	N/A	65.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	34.40 %
Unclassified	root	N/A	65.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.40 %
Unclassified	root	N/A	65.60 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.80 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.60 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.60 %
Unclassified	root	N/A	65.60 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.40 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	7.20 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	1.60 %
Unclassified	root	N/A	65.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.60 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.40 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.20 %
Nitrospinia	class	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia	1.60 %
Unclassified	root	N/A	65.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.60 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.40 %
Nitrospinales	order	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales	1.60 %
Unclassified	root	N/A	65.60 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.80 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	7.20 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.60 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7.20 %
Nitrospinaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae	1.60 %
Unclassified	root	N/A	65.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.60 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7.20 %
Nitrospina	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1.60 %
Unclassified	root	N/A	65.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.60 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7.20 %
Unclassified	root	N/A	65.60 %
unclassified Nitrospina	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina	0.80 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.60 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7.20 %
Nitrospina sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina → Nitrospina sp.	0.80 %
Unclassified	root	N/A	65.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.60 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000044\|ARSoilOldRDRAFT_c025912	Not Available	531	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105011858	Not Available	677	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1048839	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	597	Open in IMG/M
3300000953\|JGI11615J12901_10127054	Not Available	533	Open in IMG/M
3300004157\|Ga0062590_102599810	Not Available	538	Open in IMG/M
3300005093\|Ga0062594_102178095	Not Available	599	Open in IMG/M
3300005289\|Ga0065704_10377523	Not Available	777	Open in IMG/M
3300005290\|Ga0065712_10075328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3885	Open in IMG/M
3300005293\|Ga0065715_10097175	Not Available	3750	Open in IMG/M
3300005293\|Ga0065715_10222385	Not Available	1267	Open in IMG/M

Showing 1 to 10 of 125 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.20%
Host-Associated	Host-Associated	48.80%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	48.80%
Terrestrial	Environmental → Terrestrial	51.20%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.20%
Soil	Environmental → Terrestrial → Soil	51.20%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.20%
Loam	Environmental → Terrestrial → Soil → Loam	8.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.00%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	12.80%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.20%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	12.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.60%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	8.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.00%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.80%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M

Showing 1 to 10 of 95 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARSoilOldRDRAFT_0259122	3300000044	Arabidopsis Rhizosphere	MDQIIYNLSYWFDFIVLAVRHHPLISVATLLVAFLFYQTLGVMKVVGTIISFGLAVATAILLDILM*
INPhiseqgaiiFebDRAFT_1050118581	3300000364	Soil	MNQIMYDLTYWFDYMMLVVRHHPLISVATVLVAFLFYHALGVMKLIGTIISFGLVAVTAILLEMLMK*
AP72_2010_repI_A100DRAFT_10488392	3300000837	Forest Soil	MMNMNQIMYDLTYWFDFIMLVVRHHPLISVATVLVAFLFYQALSVMKFIGTIISFGLAVVTAILLQMLM*
JGI11615J12901_101270541	3300000953	Soil	MDQIIYNLTYWFDFIVLAVRHHPLISVATVLVAFLFYQTLGVMKVVGTIISFGLAVATAILLDMLM*
Ga0062590_1025998101	3300004157	Soil	MMDMNQIMYNLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0062594_1021780951	3300005093	Soil	MNMNQIMYDLTYWFDFIILVVRHHPLMSVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0065704_103775232	3300005289	Switchgrass Rhizosphere	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM*
Ga0065712_100753284	3300005290	Miscanthus Rhizosphere	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLQMLM*
Ga0065715_100971751	3300005293	Miscanthus Rhizosphere	MMNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLQMLM*
Ga0065715_102223853	3300005293	Miscanthus Rhizosphere	MMNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLGMLM*
Ga0065715_102450983	3300005293	Miscanthus Rhizosphere	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGIMKVIGTIISFALAVATAILLQMLM*
Ga0065705_100208343	3300005294	Switchgrass Rhizosphere	MNMNQIMYDLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0070658_102831333	3300005327	Corn Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLA
Ga0066388_1020624452	3300005332	Tropical Forest Soil	MNINQLMYDLTYWFDLSISAVVHHPIVSVATVLVGFVFYQALSTLKLIGTIISFGLAVVMAILL
Ga0066388_1022883811	3300005332	Tropical Forest Soil	MKMNQIMYDLTYWFDFSMLVVRNHPFISVAAVLVGFIFYQALGTLKLIGTIISFGLAVVTAIFLEMLM*
Ga0068869_1004117031	3300005334	Miscanthus Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGIMKVIGTIISFALAVATAILLQMLM*
Ga0070666_102344931	3300005335	Switchgrass Rhizosphere	MMNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM*
Ga0068868_1002545613	3300005338	Miscanthus Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM*
Ga0070694_1011931111	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFVLAVATAILLQMLM*
Ga0070678_1000078677	3300005456	Miscanthus Rhizosphere	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQM
Ga0070662_1008942561	3300005457	Corn Rhizosphere	DLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM
Ga0070679_1002643162	3300005530	Corn Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLQMLM*
Ga0070679_1004340472	3300005530	Corn Rhizosphere	MDMNQIMYDLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0070664_1000859995	3300005564	Corn Rhizosphere	MNMNQIMYDLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLVGTIISFGLAVVTAILLEMLM*
Ga0066903_1007283115	3300005764	Tropical Forest Soil	MNQIMYNLTYWFDFSMLVVRNHRFISVAAVLVGFIFYQALGTLKLFGTIISFGLAVVTAIFLEMLM*
Ga0066903_1041193872	3300005764	Tropical Forest Soil	MNQIMYDLTYWFDFSMLVVRNHPFISVAAVLVGFIFYQALGTLKLIGTIISFGLAVVTAIFLEMLM*
Ga0068863_1006948461	3300005841	Switchgrass Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQM
Ga0070712_1012365242	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDMNQIMYNLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0079222_100269494	3300006755	Agricultural Soil	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLGMLM*
Ga0079221_100116184	3300006804	Agricultural Soil	MDMNQIMYDLTYWFDFIILVVRHHPLMSVATALVAFLLYQALSVMKLIGTIISFGLAVVTAILLQMFM*
Ga0079221_116951231	3300006804	Agricultural Soil	MNQIMYNLTYWFDFSMLVVRNHPLISVAAVLVGFIFYQALGTLKLIGTIISFGLAVITAIFLEMLM*
Ga0075428_1015064731	3300006844	Populus Rhizosphere	MNQIMYDLTYWFDFIMLAVRHHPLISLATVLVAFLFYQALGVMKVIGTVISFGLAVATALLLGMLM*
Ga0075431_1019287842	3300006847	Populus Rhizosphere	IMYDLTYWFDFIMLAVRHHPLISLATVLVAFLFYQALGVMKVIGTVISFGLAVATALLLGMLM*
Ga0075433_107574332	3300006852	Populus Rhizosphere	MDQIIYNLTYWFDFIVLAVRHHPLISVATVLVAFLFYQALGVMKVVGTIISFGLAVATAILLDILM*
Ga0075425_1003015673	3300006854	Populus Rhizosphere	MNMNQIMYDLTYWFDFIILVVRHHPLMSVATVLVAFLFYQALSVMKLIGTIISFGQLWSRRFS*
Ga0068865_1011880102	3300006881	Miscanthus Rhizosphere	FDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM*
Ga0075426_106560081	3300006903	Populus Rhizosphere	MNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM*
Ga0079219_115779882	3300006954	Agricultural Soil	MNQIMYNLTYWFDFSMLVLRNHPFISVAAVFVCFIFYQALSTLKLIGTIISFGLAVVTAIFLEILM*
Ga0075435_1011410173	3300007076	Populus Rhizosphere	MDQIIYNLTYWFDFIVLAVRHHPLISVATVLVAFLFYQALGVMKVVGTIISFGLAV
Ga0111539_100330989	3300009094	Populus Rhizosphere	MMNMNQIMYDLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVIKLIGTIISFGLAVVTAILLEMLM*
Ga0111539_108167081	3300009094	Populus Rhizosphere	MMNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM*
Ga0075418_126931412	3300009100	Populus Rhizosphere	MMNMKQIMYDLTYWFDYMMLVVRHHPLISVATVLVAFLFYEALSVMKLIGAIISFGLAVVTAILLEMLMK*
Ga0114129_108522612	3300009147	Populus Rhizosphere	MYDLTYWFDYTTGMVLHHPIISIATVLVGFLFYQALSTLKFIGTIISFGVAAVTALLLDWLMF*
Ga0114129_111425473	3300009147	Populus Rhizosphere	MMNMNQIMYDLTYWFDFIILVVRHHPLMSVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0105243_108596273	3300009148	Miscanthus Rhizosphere	YDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM*
Ga0111538_101085041	3300009156	Populus Rhizosphere	MMNMNQIMYDLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLVGTIISFGLAVVTAI
Ga0105241_104373861	3300009174	Corn Rhizosphere	MMNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLQMLM*
Ga0105242_101052981	3300009176	Miscanthus Rhizosphere	MMNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVTTAILLQMLM*
Ga0105249_119802341	3300009553	Switchgrass Rhizosphere	MMNMNQIMYDLTYWFDFVLLAVSHHPLISVVTVLVAFLFYQALGVMQVIGTIISFALAVATAILLQMLM*
Ga0126374_118059331	3300009792	Tropical Forest Soil	MNINQIMYDLTYWFDLSINAVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGLAVVTAIFLEMLM*
Ga0126373_120025112	3300010048	Tropical Forest Soil	VYTATVGTNMNLNQLMYDLTYWFDSSMSAVVHHPIVSVATVLVGFIFYQALSTLKLIGTVISFGLAVVMAILLGWLTS*
Ga0126370_101378882	3300010358	Tropical Forest Soil	MMKMNQIMYDLTYWFDFSMLVVRSHPFISVAAVLVGFIFYQALGTLKLIGTIISFGLAVVTAIFLEMLM*
Ga0126372_118833571	3300010360	Tropical Forest Soil	MYDLTYWFDLSISAVVHHPIVSVATVLVGFVFYQALSTLKLIGTIISFGLAVVMAILLGWLTS*
Ga0126379_101249903	3300010366	Tropical Forest Soil	MMKMNQIMYDLTYWFDFSMLVVRNHPFISVAAVLVGFIFYQALGTLKLIGTIISFGLAVVTAIFLEMLM*
Ga0126379_105033201	3300010366	Tropical Forest Soil	MKMNQLMYDLTYWFDFSMSAVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGLAVVMAILLGWLTS*
Ga0126381_1028382972	3300010376	Tropical Forest Soil	WLMVYTAMVGTNMNINQLMYGLTYWFDYSISAVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGLAVVMAILLGWLTS*
Ga0134124_113924942	3300010397	Terrestrial Soil	MMNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGIMKVIGTIISFALAVATAILLQMLM*
Ga0124850_10413371	3300010863	Tropical Forest Soil	MATVGTNMNINQLMYDLTYWFDLSINAVVHHPIVSVATVLVGFIFYQALSTLKLIGTVISFGLAVVMAILLGWLTS*
Ga0157327_10322471	3300012512	Arabidopsis Rhizosphere	MNVNVNQIMYDLTYWFDFIILVVRHYPLMSVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0157354_10054072	3300012517	Unplanted Soil	MMDMNQIMYNLTYWFDFIILVVRHHPLISVATALVAFLLYQALSVMKLIGTIISFGLAVVTAILLKMFM*
Ga0157297_100208103	3300012914	Soil	MMNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGIMKVIGTIISFALAVATAILLQMLM*
Ga0157310_103732431	3300012916	Soil	MNVNQILYDLTYWFDYSTHMVLHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0126369_101514491	3300012971	Tropical Forest Soil	MMKMSQIMYDLTYWFDFSMLVVRNHPFISVAAVLVGFIFYQALGTLKPIGTIISFGLAVVTAIFLEMLM*
Ga0126369_107508311	3300012971	Tropical Forest Soil	ATVGTNMNINQLMYDLTYWFDLSINAVVHHPIVSVATVLVGFIFYQALSTLKLIGTVISFGLAVVMAILLGWLTS*
Ga0164308_103339491	3300012985	Soil	MMNMNQIMYDLTYWFDFIILVVRHHPLMSVATVLVAFLFYQALSVIKLIGTISTFGLAVVTAILLEMLR
Ga0157378_102028694	3300013297	Miscanthus Rhizosphere	MMKMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM*
Ga0132258_100731767	3300015371	Arabidopsis Rhizosphere	MDQIIYNLSYWFVFIVLAVRHHPLISVATLLVAFLFYQTLGVMKVVGTIISFGLAVATAILLDILM*
Ga0132258_101121265	3300015371	Arabidopsis Rhizosphere	MMDMNQIMYDLTYWFDFIILVVRHHPLISVATALVAFLLYQALSVMKLIGTIISLGLAVVTAILLEMLM*
Ga0132258_104731231	3300015371	Arabidopsis Rhizosphere	TWEEEMNMNQIMYDLTYWFDYMMLVVRHHPLISVAIVLVAFLLYQALSVMKLIATIISFGLAVVTAILLEMLMK*
Ga0132258_106856411	3300015371	Arabidopsis Rhizosphere	MNMNQIMYDLAYWFDYMMLVVRHHPLISVATVLVAFLLYQALSVMKLIGTIISVGLAVV
Ga0132258_108807233	3300015371	Arabidopsis Rhizosphere	MMNMNQIMYDLTYWFDFIILVVGHHPLISVASVLVGFIFYQALSTLKLIGTIISFGLAVVTAILLEMLM*
Ga0132258_111996471	3300015371	Arabidopsis Rhizosphere	MYNLTYWFDFSMLVVGNHPFISVAAVLVGFIFYQALGTLKLVGTIISFGLAVVTAIFLEMLM*
Ga0132256_1005499893	3300015372	Arabidopsis Rhizosphere	MMDMNQIMYDLTYWFDFIILVVRHHPLISVATALVAFLLYQALSVMKLIGTIISFGLAVVTAILLKMFM*
Ga0132256_1007511894	3300015372	Arabidopsis Rhizosphere	MNQIMYDLTYWFDFTMLVVRNHPVVSVATVLVGFIFYQALSTLKLIGTIISFGLAVVTAILLEMLM*
Ga0132256_1012026992	3300015372	Arabidopsis Rhizosphere	MNMNQIMYDLTYWFDYMMLVVRHHPLISVATVLVAFLLYQALSVMKLIATIISFGLAVVTAILLEMLMK*
Ga0132257_1004602772	3300015373	Arabidopsis Rhizosphere	MNQIMYDLTYWFDFTMLVVRNHPVISVATVLVGFIFYQALSTLKLIGTIISFGLAVVTAILLEMLM*
Ga0132257_1018547131	3300015373	Arabidopsis Rhizosphere	MNMNQIMYDLTYWFDYMMLVVRHHPLISVAIVLVAFLLYQALSVMKLIATIISFGLAVVTAILLEMLMK*
Ga0132255_1007051424	3300015374	Arabidopsis Rhizosphere	YWFDFIILVVRHHPLISVATALVAFLLYQALSVMKLIGTIISLGLAVVTAILLEMLM*
Ga0132255_1016089011	3300015374	Arabidopsis Rhizosphere	YWFDFIILVVRHHPLISVATALVAFLLYQALSVMKLIGTIISFGLAVVTAILLKMFM*
Ga0132255_1017110341	3300015374	Arabidopsis Rhizosphere	IQTGKPRREMMNMNQIMYDLTYWFDFIILVVRHHPLMSVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM*
Ga0182041_109877582	3300016294	Soil	MATVGTNMNINQLMYDLTYWFDLSISAVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGLAVVMAILLGWLTS
Ga0182032_116152261	3300016357	Soil	MVYTATVGTNMNINQLMYDLTYWFDLSISAVVHHPIVSVATALVGFIFYQALSTLKLIGTIISFGLAVVMAILLGWLTS
Ga0182034_102863291	3300016371	Soil	MMNMNQIMYDLTYWFDFSMLVVRNHPFISVAAVLVGLIFYQALSTLKLIGTIISFGLAVVTAIFLEMLM
Ga0182038_106213831	3300016445	Soil	MNMNQIMYDLTYWFDFSMLVVRNHPFISVAAVLVGFIFYQALGTLKLIGTIISFGLAVVTAILLGVLIF
Ga0173482_100871492	3300019361	Soil	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM
Ga0126371_102395514	3300021560	Tropical Forest Soil	MKMSQIMYDLTYWFDFSMLVVRNHPFISVAAVLVGFIFYQALGTLKLIGTIISFGLAVVTAIFLEMLM
Ga0126371_111024351	3300021560	Tropical Forest Soil	MATVGTNMNINQLMYDLTYWFDLSISAVVHHPIVSVATVLVGFIFYQALSTLKLVGTIISFGL
Ga0126371_117826842	3300021560	Tropical Forest Soil	MATVGTNMNINQIMYDLTYWFDFSMSAVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGLAVVMAILLGWLTS
Ga0126371_133540462	3300021560	Tropical Forest Soil	YWFDYSISAVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGLAMVMAILLGWLTS
Ga0207682_105670331	3300025893	Miscanthus Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVTTAILLQMLM
Ga0207688_102951992	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VNVNQIMYDLTYWFDFIILVVRHHPLMSVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM
Ga0207688_103375031	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLQMLM
Ga0207705_105010961	3300025909	Corn Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLQMLM
Ga0207671_103587923	3300025914	Corn Rhizosphere	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGL
Ga0207693_112431051	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDMNQIMYNLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEM
Ga0207701_100444112	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNMNQIMYDLTYWFDFIILVVRHHPLMSVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM
Ga0207701_101051204	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVVTVLVAFLFYQALGVMKVIGTIISFALAVTTAILLQMLM
Ga0207706_100284213	3300025933	Corn Rhizosphere	MMNMNQIMYDLTYWFDFIILVVRHHPLMSVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM
Ga0207706_103128981	3300025933	Corn Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVVTVLVAFLFYQALGVMKVIGTIISFALA
Ga0207669_105216331	3300025937	Miscanthus Rhizosphere	MNMNQIMYDLTYWFDFVLLAVSHHPLISVVTVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM
Ga0207679_102845573	3300025945	Corn Rhizosphere	MNMNQIMYDLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLVGTIISFGLAVVTAILLEMLM
Ga0207668_106541182	3300025972	Switchgrass Rhizosphere	MMNMNQIMYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFSLAVATAILLQMLM
Ga0207648_107770572	3300026089	Miscanthus Rhizosphere	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVVTAILLEMLM
Ga0207683_1000023751	3300026121	Miscanthus Rhizosphere	MNMNQIVYDLAYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFALAVATAILLQMLM
Ga0207698_119134451	3300026142	Corn Rhizosphere	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM
Ga0208475_10264321	3300027018	Soil	QPEDWICAEPGREKTNMNQIMYDLTYWFDFIMLAVRHHPLISLATVLVAFLFYQALGVMKVIGTVISFGLAVATALLLGMLM
Ga0209178_10532721	3300027725	Agricultural Soil	MNQIMYDLTYWFDFIILVVRHHPLMSVATALVAFLLYQALSVMKLIGTIISFGLAVVTAILLQMFM
Ga0209073_100503363	3300027765	Agricultural Soil	MNMNQIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLGMLM
Ga0209177_100065662	3300027775	Agricultural Soil	MDMNQIMYDLTYWFDFIILVVRHHPLMSVATALVAFLLYQALSVMKLIGTIISFGLAVVTAILLQMFM
Ga0209177_104019722	3300027775	Agricultural Soil	VYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLGMLM
Ga0209074_100615113	3300027787	Agricultural Soil	QIVYDLTYWFDFVLLAVSHHPLISVATVLVAFLFYQALGVMKVIGTIISFGLAVATAILLGMLM
Ga0209074_103601521	3300027787	Agricultural Soil	QIMYDLTYWFDFIILVVRHHPLMSVATALVAFLLYQALSVMKLIGTIISFGLAVVTAILLQMFM
Ga0209074_104674032	3300027787	Agricultural Soil	MDMNQIMYDLTYWFDFIILVVRHHPLMSVATALVAFLLYQALSVMKLIGTIISFGLAVVTAI
Ga0209811_103957942	3300027821	Surface Soil	MNMNQIMYDLTYWFDFVLLAVSHHPLISVVTVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM
Ga0207428_103527331	3300027907	Populus Rhizosphere	SYWFDFIVLAVRHHPLISVATLLVAFLFYQTLGVMKVVGTIISFGLAVATAILLDILM
Ga0310813_107004622	3300031716	Soil	MDMNQIMYDLTYWFDFIILVVRHHPLISVATALVAFLLYQALSVMKLIGTIISFGLAVVTAILLKMFM
Ga0310813_118934651	3300031716	Soil	MNQIMYDLTYWFDFTMLVVRNHPVVSVATVLVGFIFYQALSTLKLIGTIISFGLAVVTAILLEMLM
Ga0306923_119093991	3300031910	Soil	MNTNQLMYDLTYWFDYSVSTVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGLAMVIAILLGWLTS
Ga0306921_110625702	3300031912	Soil	MNTNQLMYDLTYWFDLSISAVVHHPIVSVATVLVGFIFYQALSTLKLIGTVISFGLAVVLALLLGWLTS
Ga0310912_103849751	3300031941	Soil	MNMNQIMYDLTYWFDFSMLVVRNHPFISVAAVLVGLIFYQALSTLKLIGTIISFGLAVVTAIFLEMLM
Ga0306926_124549851	3300031954	Soil	QLMYDLTYWFDLSINAVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGLAVVMAILLGWLTS
Ga0306922_111381552	3300032001	Soil	MNTNQLMYDLTYWFDYSVSTVVHHPIVSVATVLVGFIFYQALSTLKLIGTIISFGL
Ga0310897_103908343	3300032003	Soil	PGREMMDMNQIMYNLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM
Ga0310895_104710493	3300032122	Soil	NQIMYDLTYWFDFIILVVRHHPLISVATVLVAFLFYQALSVMKLIGTIISFGLAVVTAILLEMLM
Ga0310810_102612284	3300033412	Soil	MNQIMYNLTYWFDFSMLVVRNHPFISVAAVLVGFIFYQALGTLKLIGTIISFGLAVITAIFLEMLM

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067971

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences