Metagenome / Metatranscriptome Family F067917

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067917
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	83 residues
Representative Sequence	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Number of Associated Samples	116
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.80 %
% of genes near scaffold ends (potentially truncated)	28.80 %
% of genes from short scaffolds (< 2000 bps)	91.20 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.000 % of family members)
Environment Ontology (ENVO)	Unclassified (42.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.12% β-sheet: 0.00% Coil/Unstructured: 25.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00583	Acetyltransf_1	34.40
PF08281	Sigma70_r4_2	8.80
PF04392	ABC_sub_bind	0.80
PF04542	Sigma70_r2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.80
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.80
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.80
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	77.60 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	12.00 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	58.40 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	12.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	57.60 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	12.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	57.60 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	12.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Unclassified	root	N/A	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0545500	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	831	Open in IMG/M
3300000787\|JGI11643J11755_11594101	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	716	Open in IMG/M
3300002568\|C688J35102_117990588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	521	Open in IMG/M
3300004114\|Ga0062593_101833063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	668	Open in IMG/M
3300004153\|Ga0063455_100618111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300004156\|Ga0062589_100285922	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1264	Open in IMG/M
3300004157\|Ga0062590_101853170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	620	Open in IMG/M
3300004479\|Ga0062595_102636467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	505	Open in IMG/M
3300004798\|Ga0058859_11653954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1202	Open in IMG/M
3300005328\|Ga0070676_10298760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1091	Open in IMG/M
3300005328\|Ga0070676_10745507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	718	Open in IMG/M
3300005329\|Ga0070683_100636933	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1021	Open in IMG/M
3300005330\|Ga0070690_101172994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	612	Open in IMG/M
3300005334\|Ga0068869_100890852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	770	Open in IMG/M
3300005337\|Ga0070682_100887214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	732	Open in IMG/M
3300005338\|Ga0068868_100497049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1068	Open in IMG/M
3300005340\|Ga0070689_100556445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	989	Open in IMG/M
3300005341\|Ga0070691_10222062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1002	Open in IMG/M
3300005343\|Ga0070687_101037052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	596	Open in IMG/M
3300005354\|Ga0070675_100577149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300005364\|Ga0070673_100070301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2808	Open in IMG/M
3300005365\|Ga0070688_101186448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	613	Open in IMG/M
3300005455\|Ga0070663_100356520	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1185	Open in IMG/M
3300005457\|Ga0070662_100125747	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300005543\|Ga0070672_100226900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1568	Open in IMG/M
3300005544\|Ga0070686_100169774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1542	Open in IMG/M
3300005578\|Ga0068854_101194650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	681	Open in IMG/M
3300005614\|Ga0068856_102063596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300005617\|Ga0068859_100517185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1289	Open in IMG/M
3300005618\|Ga0068864_100521410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1146	Open in IMG/M
3300005842\|Ga0068858_100182019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1984	Open in IMG/M
3300005843\|Ga0068860_100275955	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300006042\|Ga0075368_10537467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300006186\|Ga0075369_10344419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	699	Open in IMG/M
3300006237\|Ga0097621_101701270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	601	Open in IMG/M
3300006353\|Ga0075370_10132364	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1455	Open in IMG/M
3300006358\|Ga0068871_100197456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1736	Open in IMG/M
3300009094\|Ga0111539_10553780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1339	Open in IMG/M
3300009098\|Ga0105245_10318429	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1531	Open in IMG/M
3300009101\|Ga0105247_10186945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1385	Open in IMG/M
3300009156\|Ga0111538_13729342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	528	Open in IMG/M
3300009174\|Ga0105241_11124584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	741	Open in IMG/M
3300009177\|Ga0105248_10479159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1402	Open in IMG/M
3300009545\|Ga0105237_10098400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2916	Open in IMG/M
3300009551\|Ga0105238_10351811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1462	Open in IMG/M
3300010037\|Ga0126304_11240316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	512	Open in IMG/M
3300010371\|Ga0134125_10511590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1330	Open in IMG/M
3300010396\|Ga0134126_11662043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300010399\|Ga0134127_10183689	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300010400\|Ga0134122_10985297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	824	Open in IMG/M
3300011000\|Ga0138513_100030590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	781	Open in IMG/M
3300012469\|Ga0150984_113366798	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300012915\|Ga0157302_10120584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	855	Open in IMG/M
3300012916\|Ga0157310_10253548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	667	Open in IMG/M
3300012941\|Ga0162652_100092874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300012951\|Ga0164300_11114615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300012957\|Ga0164303_10675780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	692	Open in IMG/M
3300012958\|Ga0164299_10133517	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1348	Open in IMG/M
3300012960\|Ga0164301_11428327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300012984\|Ga0164309_10548279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	894	Open in IMG/M
3300012984\|Ga0164309_11040547	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	677	Open in IMG/M
3300012987\|Ga0164307_11478539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	574	Open in IMG/M
3300012988\|Ga0164306_11342480	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	606	Open in IMG/M
3300013105\|Ga0157369_10287214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1713	Open in IMG/M
3300013296\|Ga0157374_10843717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	933	Open in IMG/M
3300014326\|Ga0157380_11388146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	752	Open in IMG/M
3300014969\|Ga0157376_10231952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1715	Open in IMG/M
3300015077\|Ga0173483_10024241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2166	Open in IMG/M
3300017792\|Ga0163161_10082941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2363	Open in IMG/M
3300017792\|Ga0163161_10728043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	828	Open in IMG/M
3300018031\|Ga0184634_10061795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1574	Open in IMG/M
3300018066\|Ga0184617_1056279	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1014	Open in IMG/M
3300018067\|Ga0184611_1218414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	678	Open in IMG/M
3300018067\|Ga0184611_1218900	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	677	Open in IMG/M
3300018072\|Ga0184635_10013523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2897	Open in IMG/M
3300018072\|Ga0184635_10041270	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300018073\|Ga0184624_10139351	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1061	Open in IMG/M
3300018073\|Ga0184624_10144839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1042	Open in IMG/M
3300018074\|Ga0184640_10004637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4539	Open in IMG/M
3300018081\|Ga0184625_10014593	All Organisms → cellular organisms → Bacteria → Proteobacteria	3668	Open in IMG/M
3300018481\|Ga0190271_10233567	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300019362\|Ga0173479_10132018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	973	Open in IMG/M
3300019767\|Ga0190267_11278999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	545	Open in IMG/M
3300019867\|Ga0193704_1096175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	523	Open in IMG/M
3300019876\|Ga0193703_1007002	All Organisms → cellular organisms → Bacteria → Proteobacteria	1658	Open in IMG/M
3300021082\|Ga0210380_10004230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5930	Open in IMG/M
3300022892\|Ga0247753_1038295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	590	Open in IMG/M
3300023266\|Ga0247789_1094066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	591	Open in IMG/M
3300023269\|Ga0247773_1215174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	572	Open in IMG/M
3300025900\|Ga0207710_10686392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	537	Open in IMG/M
3300025901\|Ga0207688_10039448	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300025901\|Ga0207688_10134222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1453	Open in IMG/M
3300025904\|Ga0207647_10299313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	916	Open in IMG/M
3300025907\|Ga0207645_10049063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2696	Open in IMG/M
3300025912\|Ga0207707_11006811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	683	Open in IMG/M
3300025918\|Ga0207662_10602518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	764	Open in IMG/M
3300025919\|Ga0207657_11203139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	576	Open in IMG/M
3300025923\|Ga0207681_11088801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	671	Open in IMG/M
3300025924\|Ga0207694_10285784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1356	Open in IMG/M
3300025926\|Ga0207659_10397022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1153	Open in IMG/M
3300025932\|Ga0207690_11773956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300025933\|Ga0207706_10080974	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300025934\|Ga0207686_10442620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	998	Open in IMG/M
3300025934\|Ga0207686_10752155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300025940\|Ga0207691_10304486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1369	Open in IMG/M
3300025941\|Ga0207711_10520499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1109	Open in IMG/M
3300025981\|Ga0207640_10135203	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300026023\|Ga0207677_11510384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	620	Open in IMG/M
3300026075\|Ga0207708_11357183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	623	Open in IMG/M
3300026088\|Ga0207641_12001113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	581	Open in IMG/M
3300026089\|Ga0207648_10246307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1593	Open in IMG/M
3300026142\|Ga0207698_10363102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1372	Open in IMG/M
3300026142\|Ga0207698_12161498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	570	Open in IMG/M
3300027866\|Ga0209813_10462265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300028379\|Ga0268266_11180870	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	740	Open in IMG/M
3300028381\|Ga0268264_10782825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	952	Open in IMG/M
3300028592\|Ga0247822_10485240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	976	Open in IMG/M
3300028712\|Ga0307285_10066447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	918	Open in IMG/M
3300028768\|Ga0307280_10080590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1060	Open in IMG/M
3300028876\|Ga0307286_10154677	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	822	Open in IMG/M
3300031058\|Ga0308189_10291556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	634	Open in IMG/M
3300031740\|Ga0307468_100068857	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300032013\|Ga0310906_10679689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	717	Open in IMG/M
3300034150\|Ga0364933_065275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	906	Open in IMG/M
3300034661\|Ga0314782_046505	Not Available	850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.00%
Host-Associated	Host-Associated	48.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	47.20%
Terrestrial	Environmental → Terrestrial	43.20%
Aquatic	Environmental → Aquatic	8.80%
Human	Host-Associated → Human	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.00%
Sediment	Environmental → Aquatic → Sediment	8.00%
Roots	Host-Associated → Plants → Roots	4.80%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.80%
Floodplain	Environmental → Terrestrial → Floodplain	0.80%
Digestive System	Host-Associated → Human → Digestive System	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.80%
Loam	Environmental → Terrestrial → Soil → Loam	10.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.00%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.20%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.80%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.80%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.80%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.20%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.80%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300023269	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_05455002	3300000033	Soil	MGKGDMARKYKYMSAEDQRTFDXWLXANTIIGLIFATGLFAMAFAGSTAFGLRKEAVAANATGDCTDSSCLEKVQKIREVRR
JGI11643J11755_115941012	3300000787	Soil	MGKGDMARKYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
C688J35102_1179905882	3300002568	Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCL
Ga0062593_1018330632	3300004114	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0063455_1006181112	3300004153	Soil	ARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAAGLREEAVAANASGDCTASSCLEKVKIREVRRPAKP*
Ga0062589_1002859222	3300004156	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVKIREVRRPAKP*
Ga0062590_1018531702	3300004157	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIIGLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0062595_1026364672	3300004479	Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0058859_116539543	3300004798	Host-Associated	MGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP*
Ga0070676_102987604	3300005328	Miscanthus Rhizosphere	DMARMYKYMSAEDQRTFDRWLKANTIIGLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0070676_107455072	3300005328	Miscanthus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAK
Ga0070683_1006369332	3300005329	Corn Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTMISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0070690_1011729942	3300005330	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRKFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0068869_1008908521	3300005334	Miscanthus Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0070682_1008872141	3300005337	Corn Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0068868_1004970491	3300005338	Miscanthus Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP*
Ga0070689_1005564452	3300005340	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0070691_102220622	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0070687_1010370522	3300005343	Switchgrass Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP*
Ga0070675_1005771493	3300005354	Miscanthus Rhizosphere	ARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0070673_1000703011	3300005364	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPARP*
Ga0070688_1011864482	3300005365	Switchgrass Rhizosphere	EDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0070663_1003565203	3300005455	Corn Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP*
Ga0070662_1001257474	3300005457	Corn Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0070672_1002269001	3300005543	Miscanthus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRP
Ga0070686_1001697741	3300005544	Switchgrass Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0068854_1011946502	3300005578	Corn Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP*
Ga0068856_1020635961	3300005614	Corn Rhizosphere	KYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGQREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0068859_1005171851	3300005617	Switchgrass Rhizosphere	EEGGMGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0068864_1005214103	3300005618	Switchgrass Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP*
Ga0068858_1001820191	3300005842	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAK
Ga0068860_1002759551	3300005843	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMAFAGSTSVGLREEAVAANASDDCTVSSCL
Ga0075368_105374672	3300006042	Populus Endosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSIAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0075369_103444192	3300006186	Populus Endosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0097621_1017012701	3300006237	Miscanthus Rhizosphere	GSMGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0075370_101323644	3300006353	Populus Endosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0068871_1001974562	3300006358	Miscanthus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0111539_105537802	3300009094	Populus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIIGLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP*
Ga0105245_103184293	3300009098	Miscanthus Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTASSCLEKVKIREVRRPAKP*
Ga0105247_101869452	3300009101	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIIGLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPARP*
Ga0111538_137293421	3300009156	Populus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0105241_111245841	3300009174	Corn Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0105248_104791593	3300009177	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0105237_100984004	3300009545	Corn Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTIIGLIFATGLIAMSFAGSTAVGQREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0105238_103518113	3300009551	Corn Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0126304_112403161	3300010037	Serpentine Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAAGLREEAVAANASGDCTASSCLETIQIREARRPA
Ga0134125_105115903	3300010371	Terrestrial Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIRAVRRPSRP*
Ga0134126_116620431	3300010396	Terrestrial Soil	DMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVELREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0134127_101836892	3300010399	Terrestrial Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0134122_109852972	3300010400	Terrestrial Soil	MGKGDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0138513_1000305902	3300011000	Soil	MGKGEIARYYKFMPPEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0150984_1133667982	3300012469	Avena Fatua Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0157302_101205841	3300012915	Soil	MGKGDMARMYKYMSTEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0157310_102535482	3300012916	Soil	MGKSDIARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0162652_1000928742	3300012941	Soil	MYKYMSAEDQRTFDRWLKANTIISLILATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0164300_111146152	3300012951	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVRLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0164303_106757802	3300012957	Soil	EGGMGKGDIARLYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0164299_101335172	3300012958	Soil	MGKGDMAPMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVKIREVRRPAKP*
Ga0164301_114283271	3300012960	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAVSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRSAKP*
Ga0164309_105482793	3300012984	Soil	RMGKGDMARMYKYMSAEDQRKFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0164309_110405471	3300012984	Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTTVGLREEAVSGDCTVSSCLEK
Ga0164307_114785392	3300012987	Soil	MGKGDMVRMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP*
Ga0164306_113424802	3300012988	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVKIREVRRPAKP*
Ga0157369_102872142	3300013105	Corn Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0157374_108437172	3300013296	Miscanthus Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPSRP*
Ga0157380_113881462	3300014326	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPARP*
Ga0157376_102319522	3300014969	Miscanthus Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP*
Ga0173483_100242411	3300015077	Soil	MGKSDIARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP*
Ga0163161_100829414	3300017792	Switchgrass Rhizosphere	MARMYKYMSTEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0163161_107280431	3300017792	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSS
Ga0184634_100617953	3300018031	Groundwater Sediment	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0184617_10562792	3300018066	Groundwater Sediment	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0184611_12184141	3300018067	Groundwater Sediment	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSC
Ga0184611_12189001	3300018067	Groundwater Sediment	MGKGEIARYYKFMPPEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSC
Ga0184635_100135234	3300018072	Groundwater Sediment	MGKGEIARYYKFMPPEDQRTFDRWLKANAMISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0184635_100412704	3300018072	Groundwater Sediment	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLE
Ga0184624_101393512	3300018073	Groundwater Sediment	MNKGEIARYYKFMPPEDQRTFDRWLKANAMISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0184624_101448392	3300018073	Groundwater Sediment	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0184640_100046374	3300018074	Groundwater Sediment	MGKGEIARYYKFMPPEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0184625_100145938	3300018081	Groundwater Sediment	MNKGEIARYYKFMPPEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAAGLREEAVAANASGDCTVSSCLEKVQIREVRRSAKP
Ga0190271_102335672	3300018481	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRSARP
Ga0173479_101320181	3300019362	Soil	DIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0190267_112789992	3300019767	Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPA
Ga0193704_10961752	3300019867	Soil	MGKGDMARMYKYMSPEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0193703_10070022	3300019876	Soil	MGKGEIARYYKFMPPEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0210380_100042307	3300021082	Groundwater Sediment	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRSAKP
Ga0247753_10382952	3300022892	Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0247789_10940662	3300023266	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0247773_12151742	3300023269	Plant Litter	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMFFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207710_106863922	3300025900	Switchgrass Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIIGLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPARP
Ga0207688_100394485	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPARP
Ga0207688_101342224	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MYKYMSAEDQRTFDRWLKANTIIGLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207647_102993132	3300025904	Corn Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP
Ga0207645_100490634	3300025907	Miscanthus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207707_110068111	3300025912	Corn Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207662_106025182	3300025918	Switchgrass Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0207657_112031392	3300025919	Corn Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207681_110888011	3300025923	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207694_102857843	3300025924	Corn Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP
Ga0207659_103970222	3300025926	Miscanthus Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0207690_117739562	3300025932	Corn Rhizosphere	RMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207706_100809744	3300025933	Corn Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0207686_104426202	3300025934	Miscanthus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRSAK
Ga0207686_107521551	3300025934	Miscanthus Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207691_103044861	3300025940	Miscanthus Rhizosphere	IARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207711_105204991	3300025941	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPARP
Ga0207640_101352034	3300025981	Corn Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCL
Ga0207677_115103841	3300026023	Miscanthus Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0207708_113571831	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANIIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207641_120011132	3300026088	Switchgrass Rhizosphere	MGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0207648_102463072	3300026089	Miscanthus Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPSRP
Ga0207698_103631021	3300026142	Corn Rhizosphere	GMGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0207698_121614981	3300026142	Corn Rhizosphere	EGSMGKSDIARMYKYMSAEDQRTFDRWLQANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPARP
Ga0209813_104622652	3300027866	Populus Endosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSIAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAKP
Ga0268266_111808702	3300028379	Switchgrass Rhizosphere	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTASSCLEKVQIREVRRPAK
Ga0268264_107828253	3300028381	Switchgrass Rhizosphere	MGKGDMARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0247822_104852402	3300028592	Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANTIVSLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0307285_100664472	3300028712	Soil	MGKGDMARMYKYMSPEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0307280_100805902	3300028768	Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0307286_101546771	3300028876	Soil	MGKGEIARYYKFMPPEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAGGLREEAVAANASGDCTVSSCLEKVQIR
Ga0308189_102915562	3300031058	Soil	MGKGDIARMYKYMSAEDQRTFDRWLKANAIVSLIFATGFIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0307468_1000688574	3300031740	Hardwood Forest Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMSFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0310906_106796891	3300032013	Soil	MGKGDMARMYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTAVGLREEAVAANASGDCTVSSCLEKVQIREVRRSAKP
Ga0364933_065275_138_371	3300034150	Sediment	MYKYMSAEDQRTFDRWLKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP
Ga0314782_046505_105_362	3300034661	Soil	MGKGDIARMYKYMSAEVQRTFDRWIKANTIISLIFATGLIAMAFAGSTSVGLREEAVAANASGDCTVSSCLEKVQIREVRRPAKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067917

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences