NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F067792

Metagenome / Metatranscriptome Family F067792

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F067792
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 75 residues
Representative Sequence AMAAIFRSVDKGATWEKITDNLKGGVMHMCPAPDGNGMVAGTSDGSLLLIDDAGVREVVSGLPFVTSVELAA
Number of Associated Samples 114
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.60 %
% of genes near scaffold ends (potentially truncated) 93.60 %
% of genes from short scaffolds (< 2000 bps) 88.00 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.200 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil
(9.600 % of family members)
Environment Ontology (ENVO) Unclassified
(36.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.400 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102
12001321099
22001323284
32213603865
4JGI10214J12806_115629681
5JGI10214J12806_116329113
6JGI10216J12902_1016944002
7JGI10220J13317_108794572
8C687J26631_102021732
9soilL2_101098171
10Ga0055471_100515221
11Ga0055489_100100834
12Ga0063356_1000891761
13Ga0063356_1033376051
14Ga0062591_1000762604
15Ga0062383_104229511
16Ga0066672_104313931
17Ga0066685_103654381
18Ga0065705_109757572
19Ga0070705_1008461301
20Ga0070700_1016887312
21Ga0070694_1010499371
22Ga0070698_1002524583
23Ga0066699_110578411
24Ga0070664_1001562574
25Ga0066691_103809911
26Ga0068852_1021821161
27Ga0068859_1010828931
28Ga0068866_104014161
29Ga0075277_10378652
30Ga0068871_1010786422
31Ga0066659_107876381
32Ga0066659_118070061
33Ga0075421_1006121632
34Ga0075421_1026767321
35Ga0075433_101460751
36Ga0075434_1001390284
37Ga0068865_1006946011
38Ga0079215_116394461
39Ga0075426_101515841
40Ga0079216_100970082
41Ga0066710_1017709862
42Ga0105106_108494511
43Ga0111539_124077172
44Ga0105092_100834951
45Ga0075423_109040771
46Ga0105242_106386741
47Ga0105242_108592931
48Ga0105056_10277211
49Ga0126373_130765891
50Ga0134080_102259321
51Ga0134071_101865242
52Ga0137312_10266951
53Ga0137314_10540411
54Ga0137462_10855541
55Ga0137437_10012751
56Ga0137342_11009141
57Ga0137338_11017272
58Ga0137334_10613001
59Ga0137382_106533961
60Ga0137376_104644562
61Ga0137369_102402491
62Ga0137369_109004131
63Ga0157337_10139992
64Ga0137358_106430082
65Ga0137410_102340981
66Ga0157369_124636631
67Ga0157377_104891372
68Ga0180090_10987121
69Ga0180065_11611592
70Ga0180094_10471771
71Ga0180086_10287042
72Ga0137409_102795923
73Ga0180085_11100762
74Ga0132257_1008254352
75Ga0132257_1030734941
76Ga0132255_1016814462
77Ga0132255_1044213651
78Ga0182035_110889771
79Ga0184620_101459181
80Ga0184638_11843461
81Ga0184621_100897561
82Ga0184615_107242371
83Ga0184637_108036802
84Ga0184617_10185011
85Ga0184635_100066155
86Ga0184632_100168261
87Ga0184633_100879961
88Ga0190265_124569412
89Ga0066662_100991903
90Ga0066669_108259171
91Ga0180115_11114702
92Ga0193739_10431371
93Ga0194128_100558964
94Ga0210380_100800091
95Ga0193695_10469191
96Ga0126371_136798532
97Ga0222622_101940701
98Ga0210061_10698022
99Ga0207657_105715942
100Ga0207657_108570052
101Ga0207706_111596151
102Ga0207712_103388932
103Ga0207708_103291462
104Ga0207708_117818662
105Ga0207674_123117261
106Ga0209690_12737152
107Ga0209818_10328092
108Ga0209485_13409142
109Ga0209998_100077244
110Ga0209073_100064134
111Ga0209798_104987262
112Ga0209814_102658092
113Ga0209382_105245902
114Ga0307281_100048771
115Ga0307312_101145393
116Ga0268386_101348353
117Ga0307497_103012421
118Ga0310892_106030282
119Ga0310901_100479693
120Ga0326597_119306842
121Ga0310896_106311102
122Ga0310812_101036053
123Ga0316620_107031581
124Ga0364929_0178737_34_249
125Ga0364942_0282605_324_539
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 34.00%    Coil/Unstructured: 66.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070AMAAIFRSVDKGATWEKITDNLKGGVMHMCPAPDGNGMVAGTSDGSLLLIDDAGVREVVSGLPFVTSVELAASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
92.0%8.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Freshwater Lake
Wetland Sediment
Natural And Restored Wetlands
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Grasslands Soil
Soil
Soil
Soil
Rice Paddy Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Groundwater Sand
Sediment
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
9.6%7.2%7.2%5.6%4.0%8.8%4.8%4.0%7.2%3.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
20013210992001200001SoilMAAIFGSRDKGSTWEKIIDNLKGGVMHMCPLPDGKGMIAGTSDGTLLVIDDSGAREIVSGLPFVTSVELAA
20013232842001200001SoilLWIREEGANAAIFRSGDKGATWEKVTDNLTGGVMNMCPTPDGNGMVAGTSDGSLLVIDDAGVREVVGGLPFVYVGGTRINPLGSFLIISV
22136038652209111006Arabidopsis RhizosphereDKGATWEKITENLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDNGVREVVTGLPFVTSVELAA
JGI10214J12806_1156296813300000891SoilKGRPNLWLREAGADAAIFRSRDQGSNWEKVADHLKGGVMHMCPTPDGNGMVAGTSDGNLLVIDDAGVREVATGLPFVTSVELAA*
JGI10214J12806_1163291133300000891SoilKGRPNLWIREEGADAAIFRSGDKGATWERMTDHIKGGVMHMCPAPDGNGMIAGTSEGSLLVIDDSGVREAVSGLPFVTSVELGA*
JGI10216J12902_10169440023300000956SoilMSAILRSSDKGKSWETVIDNLNGGVMHLCPTPDGHGMVAGTSDGTLLLVDDSGAREVVSGLPFVTSVELAA*
JGI10220J13317_1087945723300001139SoilLWLREAGADAAIFRSRDQGSNWEKVADHLKGGVMHMCPTPDGNGMVAGTSDGNLLVIDDAGVREVATGLPFVTSVELAA*
C687J26631_1020217323300002124SoilSLDKGSNWEKVIDNLNGGVMHMCPTPDGNGMVAGTSDGSLFMIDDSGAREVVSGLPFVTSVELGA*
soilL2_1010981713300003319Sugarcane Root And Bulk SoilFRSADKGATWEKITDNLKGGVMHLCPAPDGRGMVAGTSDGNLLLIDDGGVREIASGLPFVTAVELGA*
Ga0055471_1005152213300003987Natural And Restored WetlandsGRPNLWIREEGANAAIFRSADKGATWEKITDNLKGGVMHMCPTPDGNAMLAGTSNGSLLVIDDGGVREVVRGLPFVTAVELGA*
Ga0055489_1001008343300004145Natural And Restored WetlandsDGGAMSAILRSNDKGKSWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLIVDDSGAREAVKGLPFVTSVELAA*
Ga0063356_10008917613300004463Arabidopsis Thaliana RhizosphereWIREEGANAAIFRSGDKGATWEKMTDNLKGGVMHMCPAPDGNGMIAGTSDGSLLAIDDSGIREIVSGLPFITSVELAA*
Ga0063356_10333760513300004463Arabidopsis Thaliana RhizosphereNLWLREGGAMAAILRSSDKGETWETVVDNLNGGVMHLCPTPDGNGMIAGTSDGTLLVVDDDGVRQVASGLPFVTSVELAA*
Ga0062591_10007626043300004643SoilMAAIFRSRDKGSTWEKIIDNLKGGVMHMCSLPDGKGMIAGTSDGSLLVVDDSGAREIATGLPFVTSVELAA*
Ga0062383_1042295113300004778Wetland SedimentEGGALSAILRSSDKGKTWDTVIDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGARQVASGLPFVTSVELAA*
Ga0066672_1043139313300005167SoilGRPNLWIREEGAMAAIFGSGDKGATWEKIADNFKGGIMHMCPTPDGNGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSVELAA*
Ga0066685_1036543813300005180SoilAKGRPNHWIREEGAIAAIFRSRDKGTTWEKIVDNLKGGVMHMCPTPDGNGMVAGTSDGSLLIIDESGTREVASGLPFVTAVELAA*
Ga0065705_1097575723300005294Switchgrass RhizosphereEEGASAAIFRSEDKGATWEKITEKLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDSGVREVVAGLPFVTSVELAA*
Ga0070705_10084613013300005440Corn, Switchgrass And Miscanthus RhizosphereKGATWEKITDNLKGGVMHMCAAPEGNGMMAGTSDGSLLLIDESGVREVVAGLPFVTSVELAA*
Ga0070700_10168873123300005441Corn, Switchgrass And Miscanthus RhizosphereSGDKGATWEKVTDNLKGGVMHMCPAPNGNGMVAGTSDGSLLVIDDSGAREVVSGLPFVTSVELGA*
Ga0070694_10104993713300005444Corn, Switchgrass And Miscanthus RhizosphereGAMSAILRSSDKGETWETVIDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDGGVREVASGLPFVTSVELGG*
Ga0070698_10025245833300005471Corn, Switchgrass And Miscanthus RhizosphereTWEKIVDNLKGGVMHLCPAPAGNGMVAGTSDGSLLLIDDGGVREVVSGLPFVTSVELAA*
Ga0066699_1105784113300005561SoilAMAAIFRSVDKGATWEKITDNLKGGVMHMCPAPDGNGMVAGTSDGSLLLIDDAGVREVVSGLPFVTSVELAA*
Ga0070664_10015625743300005564Corn RhizosphereLWIREEGAAAAIFRSGDKGATWEKITENLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDNGVREVVAGLPFVTSVELAA*
Ga0066691_1038099113300005586SoilIREEGAMAAIFGSGDKGATWEKIADNFKGGIMHMCPTPDGIGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSVELAA*
Ga0068852_10218211613300005616Corn RhizosphereVGCAKGRPNLWMREEGAFAAIFRSGDKGATWEKITDNLKGGVMHMCAAPEGNGMMAGTSDGSLLLIDESGVREVVAGLPFVTSVELAA*
Ga0068859_10108289313300005617Switchgrass RhizosphereQGAMSAILRSSDKGKSWETVIDDLNGGVMHICPTPDGNGMVAGTSDGTLLVVDDSGARPVASGLPFVTSVELGG*
Ga0068866_1040141613300005718Miscanthus RhizosphereIFRSADKGATWEKITDNLKGGVMHMFPDPDGHGMVAGTSDGSLLLIDDSGVREVVSGLPFVSSVELAA*
Ga0075277_103786523300005895Rice Paddy SoilIREEGANAAIFRSADKGATWEKITDNLKGGVMHMCPTPDGNAMLAGTSDGSLLVIEDGGVREVVRGLPFVTAVELGA*
Ga0068871_10107864223300006358Miscanthus RhizosphereVGCAKGRPNLWMREEGASAAIFRSGDKGATWEKITDNLKGGVMHMCAAPEGNGMMAGTSDGSLLLIDESGVREVVAGLPFVTSVELAA*
Ga0066659_1078763813300006797SoilIFGSDDKGATWEKIADNFKGGIMHMCPTPDGNGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSVELAA*
Ga0066659_1180700613300006797SoilRDKGTTWEKIVDNLKGGVMHMCPTPDGNGMVAGTSDGSLLIIDESGTREVASGLPFVTAVELAA*
Ga0075421_10061216323300006845Populus RhizosphereWLREQGAMSAILRSRDKGVSWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGARQVASGLPFITSVELGA*
Ga0075421_10267673213300006845Populus RhizosphereGRPNLWIREEGAKAAIFRSDDRGATWEKITDNLKGGVMHMCPAPNGNGMVAGTSDGSLLVIDDSGVREAVNGLPFVTSVELGA*
Ga0075433_1014607513300006852Populus RhizosphereIFGSGDKGATWEKIADNFKGGIMHMCPTPDGIGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSVELAA*
Ga0075434_10013902843300006871Populus RhizosphereVGCAKGRPNLWIREEGAAAAIFRSADKGGSWEKITDNLKGGVMHMCAAPDGNSMLAGTSDGSLLLIDDSGVREVVTGLPFVTSVELGA*
Ga0068865_10069460113300006881Miscanthus RhizosphereAKGRPNLWIREEGAIAAIFRSADKGATWEKITDNLKGGVMHMCPDPDGRGMVAGTSDGSLLLIDDRGVREVVSGLPFVTSVELAA*
Ga0079215_1163944613300006894Agricultural SoilPNGWIRKEGAMAAIFRSQDKGSTWEKIIDNLKGGVMHMCPLPDGKGMIAGTSDGSLLVVDDAGAREIVTGLPFVTSVELAA*
Ga0075426_1015158413300006903Populus RhizosphereSADKGAAWEKITDNLKGGVMHMCPAPDGNGMMAGTSDGSLLLIDDRGVREVVGGLPFVTSVELAA*
Ga0079216_1009700823300006918Agricultural SoilIFRSGDKGATWEKITDDLKGGVMHMCPAPSGNAMVAGTSDGSLLMIDDSGAREVVSGLPFVTSVELGA*
Ga0066710_10177098623300009012Grasslands SoilMAAIFGSDDKGATWEKIADNFKGGIMHMCPTPDGNGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSVELAA
Ga0105106_1084945113300009078Freshwater SedimentKGRPNHWIREEGANAAIFRSGDKGATWEKITDNLKGGVMHMCPTPDGSGMVAGTSDGSLLIIDESGAREVVSGLPFVTSVELGA*
Ga0111539_1240771723300009094Populus RhizosphereFRSRDKGSSWEKIIDNLKGGVMHMCALPEGRGMIAGTSDGTLLVVDDSGAREIVNGLPFVTSVELAA*
Ga0105092_1008349513300009157Freshwater SedimentNGWIRKEGAMAAIFRSQDKGSTWEKIIDNLKGGVMHMCPLPDGKGMIAGTSDGTLLVVDDAGAREIVTGLPFVTSVELAA*
Ga0075423_1090407713300009162Populus RhizosphereSADKGATWEKITDNLKGGVMHMCPDPDGNGMVAGTSDGSLLLIDDSGVREVVSGLPFVTSVELAA*
Ga0105242_1063867413300009176Miscanthus RhizosphereSDRGATWETVTDNLPGGVMHFCESPDGNGMIAGTSDGTLLLIDDSGARPLVTGLPFVTSVELGA*
Ga0105242_1085929313300009176Miscanthus RhizosphereLGAAKGRPNLWIREEGAIAAIFRSADKGATWEKITDNLKGGVMHMCPDPDGRGMVAGTSDGSLLLIDDRGVREVVSGLPFVTSVELAA*
Ga0105056_102772113300009801Groundwater SandRPNLWLREEGAMSAILRSRDKGASWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDASGARQVASGLPFVTSVELGA*
Ga0126373_1307658913300010048Tropical Forest SoilGAAAAIFRSGDKGATWEKITDNLKGGVMHICKAPDGNGMVAGTSDGCLLLIDDSGVREVASGLPFVTSVELAA*
Ga0134080_1022593213300010333Grasslands SoilIREEGAIAAIFCSRDKGATWEKIVDGLNGGVMHMCRTPEGSGMVAGTSDGALLTIDDSGVREVVNGLPFVTAVELGA*
Ga0134071_1018652423300010336Grasslands SoilLGCAKGRPNHWIREEGAIAAIFRSRDKGTTWEKIVDNLKGGVMHICPTPDGNGMVAGTSDGSLLIIDDSGAREVASGLPFVTAVELAV*
Ga0137312_102669513300011400SoilNLWLREGGAMAAIMRSSDKGETWETVVDNLNGGVMHLCPTPDGNGMIAGTSDGTLLVVDDDGVRHVASGLPFVTSVELAA*
Ga0137314_105404113300011420SoilGVSWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGARQAASGLPFVTSVELAA*
Ga0137462_108555413300011421SoilRGRPNLWLREEGAMSAILRSSDKGKTWDTVIDNLNGGVMHLCPTPEGNGMIAGTSDGTLLLVDDSGAREVASGLPFVTSVELAA*
Ga0137437_100127513300011442SoilILRSRDKGGSWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGARQVASGLPFVTSVELAA*
Ga0137342_110091413300012171SoilLWIREQGAMSAILRSGDKGSTWETIVDGLKGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGAREVASGLPFVTSVELAM*
Ga0137338_110172723300012174SoilAMAAIFRSRDKGSNWEKVIDNLNGGVMHMCPTPDGNGIVAGTSDGSLLVIDDAGAREVCSGLPFVTTVELGA*
Ga0137334_106130013300012179SoilGAMSAILRSGDKGSTWETIVDGLKGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGAREVASGLPFVTSVELAM*
Ga0137382_1065339613300012200Vadose Zone SoilKGRPNLWIREEGAMAAIFRSADKGATWEKITDNLKGGVMHMCPAPDGNSMVAGTSDGSLLLIDDSGLREVVSGLPFVTSVELAA*
Ga0137376_1046445623300012208Vadose Zone SoilWEKITDNLKGGVMHMCPAPDGNGMVAGTSDGSLLLIDDRGVREVVSGLPFVTSVELAA*
Ga0137369_1024024913300012355Vadose Zone SoilIFRSRDKGATWEKIVDNLKGGVMHMCPTPDGNGMVAGTSDGSLLIIDDSGAREIASGLPFVTAVELAA*
Ga0137369_1090041313300012355Vadose Zone SoilIFRSRDKGATWEKIVDNLKGGVMHMCPTPDGNGMVAGTSDGSLLVIDDSGAREVASGLPFVTAVELAA*
Ga0157337_101399923300012483Arabidopsis RhizosphereEEGAAAAIFRSSDKGATWEKITNNLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDNDVREVVAGLPFVTSVELAA*
Ga0137358_1064300823300012582Vadose Zone SoilLGAAKGRPNLWIREEGAMAAIFRSADKGATWEKITDNLKGGVMHMCPAPDGNGMVAGTSDGSLLLIDDRGVREVVSGLPFVTSVELAA*
Ga0137410_1023409813300012944Vadose Zone SoilWEKIADNFKGGIMHMCPTPDGNGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSLELAA*
Ga0157369_1246366313300013105Corn RhizosphereCAKGRPNLWMREEGAFAAIFRSGDKGATWEKITDNLKGGVMHMCAAPEGNGMMAGTSDGSLLLIDESGVREVVAGLPFVTSVELAA*
Ga0157377_1048913723300014745Miscanthus RhizosphereYVGCAKGRPNLWMREEGASAAIFRSGDKGATWEKITDNLKGGVMHMCAAPEGNGMMAGTSDGSLLLIDESGVREVVAGLPFVTSVELAA*
Ga0180090_109871213300014866SoilGKTWDTVIDNLNGGVMHLCPTLDGNGMIAGTSDGTLLLVDDCGAREVASGLPFVTSVELAA*
Ga0180065_116115923300014878SoilGRPNLWLREGGAMSAILRSSDKGETWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVIDNDGVREVAKGLPFVTSVELAA*
Ga0180094_104717713300014881SoilIFRSRDKGSNWEKVIDNLNGGVMHMCPTPDGNGMVAGTSDGSLLVIDDAGASEVVSGLPFVTSMELGA*
Ga0180086_102870423300014883SoilLRSSDKGKTWDTVIDNLNGGVMHLCPTPDGNGMIAGTSDGTLLLVDDSGARKVASGLPFVTSVELAA*
Ga0137409_1027959233300015245Vadose Zone SoilMAAIFGSDDKGTTWEKIADNFKGGIMHMCPTPDGNGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSLELAA*
Ga0180085_111007623300015259SoilFRSRDKGSNWEKVIDNLNGGVMHMCPTPDGNGMVAGTSDGSLLMIDDSGAREVVSGLPFVTSVELGA*
Ga0132257_10082543523300015373Arabidopsis RhizosphereVYLGAAKGRPNLWIREEGAIAAIFRSADKGATWEKITDNLKGGVMHMCPAPDGNGMVAGTSDGSLLLIDDSGVREVVSGLPFVTSLELAA*
Ga0132257_10307349413300015373Arabidopsis RhizosphereGANAAIFRSGDKGETWEKMADNIKGGVMHICPAPDGNGMIAGTSEGSLLAIDDSGVREVVSGLPFVTSVELGA*
Ga0132255_10168144623300015374Arabidopsis RhizosphereAIFRSEDKGATWEKITENLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDNGVREVVAGLPFVTSVELAA*
Ga0132255_10442136513300015374Arabidopsis RhizosphereGATWEKITENLKGGVMHMCAAPDGNGMIAGTSDGSLLLIADNGVREIVAGLPFVTSVELAA*
Ga0182035_1108897713300016341SoilAAIFRSGDKGATWEKITDNLKGGVMHMCAAPDGKGMVAGTSDGSLLLIDDSGVREVVSGLPFVTSVELAA
Ga0184620_1014591813300018051Groundwater SedimentWEKVADHLKGGVMHMCPTPDGNGMVAGTSDGNLLVIDDAGVREVATGLPFVTSVELAA
Ga0184638_118434613300018052Groundwater SedimentNLWIREEGAIAAIFRSRDKGATWEKIVDNLKGGVMHLCPAPNGNGMVAGTSDGSLLLIDDSGVREVVNGLPIVTSAELAA
Ga0184621_1008975613300018054Groundwater SedimentWIREEGAIAAIFRSRDKGATWEKIVDNLKGGVMHLCPAPAGNGMVAGTSDGSLLLIDDAGVREVVSGLPFVTSVELAV
Ga0184615_1072423713300018059Groundwater SedimentRGRPNLWLREEGAMSAILRSSDKGKSWDTVIDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDGGVRQVASGLPFVTSVELGA
Ga0184637_1080368023300018063Groundwater SedimentIRDEGAMAAIFRSRDKGSNWEKVIDNLNGGVMHMCPTPNGNGMVAGTSDGSLLVIDDAGAREVVSGLPFVTAVALGA
Ga0184617_101850113300018066Groundwater SedimentSNWEKVTDHLKGGVMHMCPTPDGNGMVAGTSDGNLLVIDDAGVREVAIGLPFVTSVELAA
Ga0184635_1000661553300018072Groundwater SedimentLWIREEGAIAAIFRSADKGATWEKITDNLKGGVMHMCPDPDGNGMVAGTSDGSLLLIDDSGVREVVSGLPFVTSVELAA
Ga0184632_1001682613300018075Groundwater SedimentTMSAILRSGDKGSTWETIVDKLKGGVMHLCSTPDGNGMVAGTSDGSLLVVDDSGAREVASGLPFVTSVELAA
Ga0184633_1008799613300018077Groundwater SedimentNLWIRDEGAMAAIFRSRDKGSNWEKVIDNLNGGVMHMCPTPDGNGMVAGTSDGSLLVIDDSSARAVVSGLPFVTTVALGA
Ga0190265_1245694123300018422SoilVVYLGSAKGRPNGWIRREGAMAAIFRSRDKGSTWEKIIDNLKGGVMHMCALPEGKGMIAGTSDGTLLVVDDSGAREIVSGLPFVTSVELAA
Ga0066662_1009919033300018468Grasslands SoilTWEKIVDGLNGGVMHMCRTPEGSGMVAGTSDGALLTIDDSGVREVVSGLPFVTAVELGA
Ga0066669_1082591713300018482Grasslands SoilRGAAKGRLNFWNREEDSLAAIVRSADKGPTWEKITDNLKGGVMHMCPAPDGNGMVAGTSDGSLLLIDDAGVGEVVSGLPFVTSVELAA
Ga0180115_111147023300019257Groundwater SedimentMSAILRSGDKGKSWETVIDNLNGGVMHLCPTPDGNGMIAGTSDGTLLLVDDSGAREVASGLPFVTSVELAA
Ga0193739_104313713300020003SoilNHCIREQGAIAAIFRSGDKGATWEKIADNLNGGVMHMCPAPDGNGMVAGTSDGSVLLIDDSGVREVVSGLPFVTSVELAA
Ga0194128_1005589643300020197Freshwater LakeRSSDKGRTWDTVVDNLNGGVMHLCESPDGKGMIAGTSDGTLLYVDDGGARTVASGLPFVTSVELGA
Ga0210380_1008000913300021082Groundwater SedimentLRSSDKGKTWDTVIDNLNGGVMHLCPTPDGNGMIAGTSDGTLLLVDDSGAREVASGLPFVTSVELAA
Ga0193695_104691913300021418SoilLGAAKGRPNLWIREEGAMAAIFGSGDKGATWEKIADKFKGGIMHMCPTPDGNGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSVELAA
Ga0126371_1367985323300021560Tropical Forest SoilGRPNLWIRAEGAAAAIFRSGDKGATWEKITDDLKGGVMHICTAPDGNGMVAGTSDGSLLLIDDSGVREVASGLPFVTSVELAA
Ga0222622_1019407013300022756Groundwater SedimentLWIREEGAIAAIFRSADKGATWEKITDNLKGGVMHMCPDPDGHGMVAGTSDGSLLLIDDRGVREVVSGLPFVTSVELAA
Ga0210061_106980223300025537Natural And Restored WetlandsIFRSADKGATWEKITDNLKGGVMHMCPTPDGNAMLAGTSDGSLLVIEDGGVREVVRGLPFVTAVELGA
Ga0207657_1057159423300025919Corn RhizosphereYVGCAKGRPNLWMREEGAFAAIFRSGDKGATWEKITDNLKGGVMHMCAAPEGNGMMAGTSDGSLLLIDESGVREVVAGLPFVTSVELAA
Ga0207657_1085700523300025919Corn RhizosphereSEDKGATWEKITENLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDNGVREVVAGLPFVTSVELAA
Ga0207706_1115961513300025933Corn RhizosphereCAKGRPNLWMREEGASAAIFRSEDKGATWEKITEKLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDNGVREVVAGLPFVTSVELAA
Ga0207712_1033889323300025961Switchgrass RhizosphereMREEGASAAIFRSGDKGATWEKITDNLKGGVMHMCAAPEGNGMMAGTSDGSLLLIDESGVREVVGGLPFVTSVELAA
Ga0207708_1032914623300026075Corn, Switchgrass And Miscanthus RhizospherePNLWLREAGADAAIFRSRDQGSNWEKVTDHLKGGVMHMCPTPDGNGMVAGTSDGNLLVVDDAGVREVATGLPFVTSVDLAA
Ga0207708_1178186623300026075Corn, Switchgrass And Miscanthus RhizosphereEEGANAAIFRSGDKGVTWEKMTDNLRGGVMHMCPAPDGNGMIAGTSDGTLLLIDDSGARPLVTGLPFVTSVELGA
Ga0207674_1231172613300026116Corn RhizosphereEAGADAAIFRSRDQGSNWEKVADHLKGGVMHMCPTPDGNGMVAGTSDGNLLVIDDAGVREVATGLPFVTSVELAA
Ga0209690_127371523300026524SoilAAIFCSRDKGATWEKIVDGLNGGVMHMCRTPEGSGMVAGTSDGALLTIDDSGVREVVSGLPFVTAVELGA
Ga0209818_103280923300027637Agricultural SoilIGAAQGRPNLWIREEGAKAAIFRSGDKAATWEKITDNLKGGVMNMCPAPDGNGMVAGTSDGSLLVIDDSGAREVVSGLPFVTSVELGA
Ga0209485_134091423300027691Agricultural SoilGANAAIFRSGDKGATWEKITDDLKGGVMHMCPAPSGNAMVAGTSDGSLLMIDDSGAREVVSGLPFVTSVELGA
Ga0209998_1000772443300027717Arabidopsis Thaliana RhizosphereAAIFRSADKGATWEKITDNLRGGVMHMCPTPDGNAMLAGTSDGSLLVIDDGGVREVVSGLPFVTAVELGA
Ga0209073_1000641343300027765Agricultural SoilAIFRSSDKGATWEKITNNLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDNDVREVVAGLPFVTSVELAA
Ga0209798_1049872623300027843Wetland SedimentREEGAMSAILRSSDKGKTWDTVIDNLNGGVMHLCPTPDGNGMIAGTSDGTLLLVDDSGAREVASGLPFVTSVELAA
Ga0209814_1026580923300027873Populus RhizosphereGAIAAIFRSADKGATWEKITDNLKGGVMHMCPDPDGNGMVAGTSDGSLLLIDDRGVREVVRGLPFVTSVELAA
Ga0209382_1052459023300027909Populus RhizosphereRGRPNLWLREQGAMSAILRSRDKGVSWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGARQVASGLPFITSVELGA
Ga0307281_1000487713300028803SoilKGAMSAILRSRDKGGSWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGSLLVVDDSGARQVASGLPFVTSVELAA
Ga0307312_1011453933300028828SoilLWIREEGAMAAIFGSGDKGATWEKIADKFKGGIMHMCPTPDGNGMVAGTSDGSLLVIDDAGVREVVSGLPFVTSVELAA
Ga0268386_1013483533300030619SoilGDRGATWEKITDNLKGGVMHICPTPDGSGMVAGTSDGSLLVVDESGAREVVSGLPFVTCVEVGA
Ga0307497_1030124213300031226SoilNLWLREGGAMSAILRSSDKGETWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGAREVVKGLPFVTSVELAA
Ga0310892_1060302823300031858SoilTWDKITENLKGGVMHMCAAPDGNGMIAGTSDGSLLLIDDNGVREVVAGLPFVTSVELAA
Ga0310901_1004796933300031940SoilMAAIFRSRDKGSSWEKIIDNLKGGVMHMCALPEGRGMIAGTSDGTLLVVDDSGAREIVNGLPFVTSVELAA
Ga0326597_1193068423300031965SoilRGRPNLWIREQGAMSAILRSGDKGSTWETIVDRLKGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGARAVASGLPFVTSVELAA
Ga0310896_1063111023300032211SoilPNLWLREQGAMSAILRCSDKGKSWETVIDDLNGGVMHICPTPDGNGMVAGTSDGTLLVVDDSGARPVASGLPFVTSVELGG
Ga0310812_1010360533300032421SoilRSGDKGATWEKITDNLKGGVMHMCAAPEGNGMMAGTSDGSLLLIDESGVREVVAGLPFVTSVELAA
Ga0316620_1070315813300033480SoilMFCSRDKGVSWEKIADNLKGGVMHMCPMPDGNGMVAGTSDGSLLVIDDKGVREVASGLPFVTAVELAA
Ga0364929_0178737_34_2493300034149SedimentMSAILRSSDKGETWETVVDNLNGGVMHLCPTPDGNGMVAGTSDGTLLVVDDSGARPVASGLPFVTSVELGG
Ga0364942_0282605_324_5393300034165SedimentMAAIFRSRDKGSNWEKVIDNLNGGVMHMCPTPDGNGMVAGTSDGSLLVIDDAGASEVVSGLPFVTSMELGA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.