Metagenome / Metatranscriptome Family F067783

Basic Information
Family ID	F067783
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	75 residues
Representative Sequence	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH
Number of Associated Samples	108
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.80 %
% of genes near scaffold ends (potentially truncated)	48.00 %
% of genes from short scaffolds (< 2000 bps)	89.60 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (87.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.600 % of family members)
Environment Ontology (ENVO)	Unclassified (29.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.400 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.32% β-sheet: 0.00% Coil/Unstructured: 25.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF12071	DUF3551	17.60
PF13340	DUF4096	4.80
PF13586	DDE_Tnp_1_2	3.20
PF01594	AI-2E_transport	0.80
PF01175	Urocanase	0.80
PF00484	Pro_CA	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.80
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.80
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	0.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.20 %
Unclassified	root	N/A	12.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.20 %
Unclassified	root	N/A	12.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.20 %
Unclassified	root	N/A	12.80 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.80 %
Unclassified	root	N/A	12.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	82.40 %
Unclassified	root	N/A	12.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.20 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.60 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.60 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.80 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.60 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.80 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.60 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.80 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig20464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1228	Open in IMG/M
2199352025\|deepsgr__Contig_58537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M
2228664021\|ICCgaii200_c0514081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0745521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0745876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1763	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105815953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1353	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105817273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1405	Open in IMG/M
3300000787\|JGI11643J11755_11229706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300001976\|JGI24752J21851_1029083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300002073\|JGI24745J21846_1051076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300002568\|C688J35102_120070576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300004114\|Ga0062593_102642427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300004153\|Ga0063455_100979221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300004463\|Ga0063356_102397156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300004479\|Ga0062595_101280945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300005165\|Ga0066869_10004490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1699	Open in IMG/M
3300005173\|Ga0066822_1007327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300005337\|Ga0070682_100051977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2563	Open in IMG/M
3300005339\|Ga0070660_100184335	All Organisms → cellular organisms → Bacteria → Proteobacteria	1690	Open in IMG/M
3300005341\|Ga0070691_10642140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	631	Open in IMG/M
3300005345\|Ga0070692_10077831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1779	Open in IMG/M
3300005347\|Ga0070668_101131243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300005347\|Ga0070668_101601845	Not Available	597	Open in IMG/M
3300005364\|Ga0070673_102304172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300005365\|Ga0070688_100092860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1975	Open in IMG/M
3300005436\|Ga0070713_100225860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1700	Open in IMG/M
3300005440\|Ga0070705_100022476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3371	Open in IMG/M
3300005440\|Ga0070705_100334725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1098	Open in IMG/M
3300005444\|Ga0070694_100326345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1182	Open in IMG/M
3300005444\|Ga0070694_100942881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300005456\|Ga0070678_100174816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1753	Open in IMG/M
3300005456\|Ga0070678_101587375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300005549\|Ga0070704_102045493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300005564\|Ga0070664_100144385	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300005719\|Ga0068861_101837963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300005843\|Ga0068860_102116798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300006038\|Ga0075365_10097419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2011	Open in IMG/M
3300006038\|Ga0075365_10211515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1359	Open in IMG/M
3300006046\|Ga0066652_101458199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300006057\|Ga0075026_100528460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300006358\|Ga0068871_102384511	Not Available	505	Open in IMG/M
3300006578\|Ga0074059_12136482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300006854\|Ga0075425_100258376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2004	Open in IMG/M
3300006854\|Ga0075425_101789193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300006954\|Ga0079219_10400939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	909	Open in IMG/M
3300009101\|Ga0105247_10028284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3391	Open in IMG/M
3300009148\|Ga0105243_10427293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300009176\|Ga0105242_12351121	Not Available	580	Open in IMG/M
3300010036\|Ga0126305_10963585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300010371\|Ga0134125_12333532	Not Available	582	Open in IMG/M
3300010373\|Ga0134128_10044226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5180	Open in IMG/M
3300010399\|Ga0134127_11975397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300010400\|Ga0134122_10269973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1446	Open in IMG/M
3300010401\|Ga0134121_11279866	Not Available	737	Open in IMG/M
3300011119\|Ga0105246_10920042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300012212\|Ga0150985_112791419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300012469\|Ga0150984_103065681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300012915\|Ga0157302_10281608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300012916\|Ga0157310_10092936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300012939\|Ga0162650_100031185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300012951\|Ga0164300_10005842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3540	Open in IMG/M
3300012951\|Ga0164300_10181182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300012957\|Ga0164303_10533064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300012961\|Ga0164302_10503189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300012986\|Ga0164304_11618755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300012987\|Ga0164307_10173088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1445	Open in IMG/M
3300013297\|Ga0157378_12115094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300014325\|Ga0163163_13058940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300014969\|Ga0157376_13145850	Not Available	500	Open in IMG/M
3300015200\|Ga0173480_10081150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300015374\|Ga0132255_104337419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300015374\|Ga0132255_104994635	Not Available	562	Open in IMG/M
3300017792\|Ga0163161_10076720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2453	Open in IMG/M
3300017965\|Ga0190266_10052657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1449	Open in IMG/M
3300017965\|Ga0190266_10649231	Not Available	649	Open in IMG/M
3300017997\|Ga0184610_1106578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300018000\|Ga0184604_10154639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300018000\|Ga0184604_10285118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300018031\|Ga0184634_10205178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300018054\|Ga0184621_10021938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1973	Open in IMG/M
3300018055\|Ga0184616_10064486	Not Available	1253	Open in IMG/M
3300018066\|Ga0184617_1184322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300018072\|Ga0184635_10051624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1588	Open in IMG/M
3300018073\|Ga0184624_10368764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300018081\|Ga0184625_10131676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1303	Open in IMG/M
3300018429\|Ga0190272_10557672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300018465\|Ga0190269_11526990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300018469\|Ga0190270_10164387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1824	Open in IMG/M
3300018469\|Ga0190270_11998227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300018469\|Ga0190270_12439812	Not Available	585	Open in IMG/M
3300019875\|Ga0193701_1109328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300019889\|Ga0193743_1243824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300020002\|Ga0193730_1130643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300021078\|Ga0210381_10099360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300021082\|Ga0210380_10255237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300022694\|Ga0222623_10252022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300022756\|Ga0222622_10023278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3191	Open in IMG/M
3300025904\|Ga0207647_10184554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1210	Open in IMG/M
3300025928\|Ga0207700_10547276	Not Available	1027	Open in IMG/M
3300025930\|Ga0207701_10934002	Not Available	725	Open in IMG/M
3300025942\|Ga0207689_10018646	All Organisms → cellular organisms → Bacteria → Proteobacteria	5854	Open in IMG/M
3300026067\|Ga0207678_10468089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300026078\|Ga0207702_10942086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300026078\|Ga0207702_12431371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300028597\|Ga0247820_10837333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300028710\|Ga0307322_10214851	Not Available	527	Open in IMG/M
3300028717\|Ga0307298_10120436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300028720\|Ga0307317_10019110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2085	Open in IMG/M
3300028720\|Ga0307317_10257209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300028744\|Ga0307318_10023473	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300028768\|Ga0307280_10047758	Not Available	1330	Open in IMG/M
3300028878\|Ga0307278_10342137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300028885\|Ga0307304_10258308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300028889\|Ga0247827_11090975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300031058\|Ga0308189_10106485	Not Available	898	Open in IMG/M
3300031058\|Ga0308189_10441017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300031170\|Ga0307498_10003606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2598	Open in IMG/M
3300031198\|Ga0307500_10129654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300031226\|Ga0307497_10043635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1537	Open in IMG/M
3300031547\|Ga0310887_10365176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300031740\|Ga0307468_100140371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1530	Open in IMG/M
3300031943\|Ga0310885_10499327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300032075\|Ga0310890_11101120	Not Available	643	Open in IMG/M
3300033550\|Ga0247829_11509978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300034151\|Ga0364935_0196376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.00%
Host-Associated	Host-Associated	27.20%
Engineered	Engineered	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	27.20%
Aquatic	Environmental → Aquatic	12.00%
Modeled	Engineered → Modeled	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.00%
Sediment	Environmental → Aquatic → Sediment	10.40%
Roots	Host-Associated → Plants → Roots	3.20%
Freshwater	Environmental → Aquatic → Freshwater	1.60%
Floodplain	Environmental → Terrestrial → Floodplain	0.80%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.80%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.40%
Loam	Environmental → Terrestrial → Soil → Loam	10.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.60%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.60%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.80%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.80%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.60%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.80%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.80%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300002073	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0464.00002020	2166559005	Simulated	MSQIDPWEKAADCERAIQAAADPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
deepsgr_00713380	2199352025	Soil	MSQIDPWEKAADCERAIQAAGDPQXXXILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
ICCgaii200_05140811	2228664021	Soil	MSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH
ICChiseqgaiiDRAFT_07455213	3300000033	Soil	MSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSL
ICChiseqgaiiDRAFT_07458761	3300000033	Soil	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH*
INPhiseqgaiiFebDRAFT_1058159532	3300000364	Soil	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIAXXNESDCMSADEFAREXEVIGRLHVELALVESPSLH*
INPhiseqgaiiFebDRAFT_1058172733	3300000364	Soil	MXQIDPWEKAADCERAVQAAADPQQKKILKNLRYLWIALANESDCMSADEFAREIEVIGRLHVELALVESPSLH*
JGI11643J11755_112297062	3300000787	Soil	MSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELA
JGI24752J21851_10290831	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLHXRPASDIIEAGARLLV*
JGI24745J21846_10510761	3300002073	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADXFAHESETIGRLHVALARARAPSLH*
C688J35102_1200705763	3300002568	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSPDEFAHESETIGRLHVALARSRAPSLH*
Ga0062593_1026424272	3300004114	Soil	TMSRIDPWEKAADCERAIQSAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIALVRARALSLH*
Ga0063455_1009792211	3300004153	Soil	MSRIDPWEKAADCERAIQAAADQQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH*
Ga0063356_1023971561	3300004463	Arabidopsis Thaliana Rhizosphere	MSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH*
Ga0062595_1012809451	3300004479	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALSRARTPSLH*
Ga0066869_100044905	3300005165	Soil	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADGFAHESETIGRLHVALARARAPSLH*
Ga0066822_10073271	3300005173	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0070682_1000519777	3300005337	Corn Rhizosphere	KAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0070660_1001843356	3300005339	Corn Rhizosphere	AADCERAIQSAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIALVRARALSLH*
Ga0070691_106421401	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	SGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH*
Ga0070692_100778311	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PCGTKVPGAAYSGATEATMSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0070668_1011312431	3300005347	Switchgrass Rhizosphere	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPSLH*
Ga0070668_1016018452	3300005347	Switchgrass Rhizosphere	MSRIDKWEKAADCERAIQSAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIALVRARALSLH*
Ga0070673_1023041721	3300005364	Switchgrass Rhizosphere	EATMSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0070688_1000928601	3300005365	Switchgrass Rhizosphere	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH*
Ga0070713_1002258605	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ATMSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLHQRPASDIIEAGARLLV*
Ga0070705_1000224762	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADGFADESETIGRLHVALARARAPSLHQRPASDIIEAGARLLV*
Ga0070705_1003347251	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH*
Ga0070694_1003263451	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH*
Ga0070694_1009428811	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0070678_1001748161	3300005456	Miscanthus Rhizosphere	MSRIDPWEKAADCERAIQSAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIALVRARALSLH*
Ga0070678_1015873751	3300005456	Miscanthus Rhizosphere	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARGPSLH*
Ga0070704_1020454932	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDR
Ga0070664_1001443851	3300005564	Corn Rhizosphere	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIA
Ga0068861_1018379632	3300005719	Switchgrass Rhizosphere	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIALVRARALSLH*
Ga0068860_1021167982	3300005843	Switchgrass Rhizosphere	TMSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH*
Ga0075365_100974194	3300006038	Populus Endosphere	MSRIDPWEKAADCERALQAAADPQQKTILKNLRYLWIALANESDCMSADEFARESETIGRLHIALARSRARSLH*
Ga0075365_102115151	3300006038	Populus Endosphere	MSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFACESEVIGRLHVELALLDRPSLH*
Ga0066652_1014581991	3300006046	Soil	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALVESPSLH*
Ga0075026_1005284601	3300006057	Watersheds	MSQIDPWEKAADCERAVQAAADPQQKKIFKNLRYLWIALANESDCMSADEFAREIEVIGRLHVELALVESPSLH*
Ga0068871_1023845111	3300006358	Miscanthus Rhizosphere	AADCERAIQAAADPQQKTILKNLRYLWIALAHESECMSADEFAHESETIGRLHIALARARAPSLH*
Ga0074059_121364823	3300006578	Soil	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPSLH*
Ga0075425_1002583765	3300006854	Populus Rhizosphere	MSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGR
Ga0075425_1017891932	3300006854	Populus Rhizosphere	SQIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADGFADESETIGRLHVALARARAPSLH*
Ga0079219_104009393	3300006954	Agricultural Soil	SGIDPWEKVADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH*
Ga0105247_100282844	3300009101	Switchgrass Rhizosphere	MSGIDPWEKAADCERALQAASDPRQKRILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH*
Ga0105243_104272934	3300009148	Miscanthus Rhizosphere	PGAAYSGAMEATMSRIDPWEKAADCERAIQSAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIALVRARALSLH*
Ga0105242_123511211	3300009176	Miscanthus Rhizosphere	ADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPSLH*
Ga0126305_109635851	3300010036	Serpentine Soil	MSRIDPWEKAADCERAIQAAADQQQKTILKNLRYLWIALANESECMSPDEFAHESETIGRLHIALARARAASLH*
Ga0134125_123335321	3300010371	Terrestrial Soil	ATMSRIDKWEKAADCERAIQSAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIALARARAPSLH*
Ga0134128_100442266	3300010373	Terrestrial Soil	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADGFADESETIGRLHVALARARAPSLH*
Ga0134127_119753971	3300010399	Terrestrial Soil	KVPGAAYSGATEATMSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLHQRPASDIIEAGARLLV*
Ga0134122_102699734	3300010400	Terrestrial Soil	DPPEPKFRGTAYSGAPEVTMSQIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0134121_112798662	3300010401	Terrestrial Soil	ATEATMSEMDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0105246_109200421	3300011119	Miscanthus Rhizosphere	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARSRSPSLH*
Ga0150985_1127914192	3300012212	Avena Fatua Rhizosphere	ATMSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH*
Ga0150984_1030656811	3300012469	Avena Fatua Rhizosphere	MSLIDPWEKAADCERAIHAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARVPCLH*
Ga0157302_102816082	3300012915	Soil	CGTKVPGAAYSGATEATMSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADGFADESETIGRLHVALARARAPSLH*
Ga0157310_100929361	3300012916	Soil	MEATMSGIDPWEKAADCERALQAASDPQQKKILKNLRYLWIALANECDVMSADEFARETEVIGRLHVELALLDRPSLH*
Ga0162650_1000311851	3300012939	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANASDCMSADEFAHESETIGRLHVALARARAPSLH*
Ga0164300_100058427	3300012951	Soil	PGAAYSGATEATMSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0164300_101811822	3300012951	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALAHESECMSADEFAHESETIGRLHIALARARAPALH*
Ga0164303_105330641	3300012957	Soil	TKVPGAAYSGATEETMSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALAHESECMSADEFAHESETIGRLHIALARARAPSLH*
Ga0164302_105031891	3300012961	Soil	MSGIDPWEKAADCERALQAASDPRQKKILKNLSYLWIALANECDVMSADEFARESEVIGRLHVEL
Ga0164304_116187551	3300012986	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHITLARSRSPSLH*
Ga0164307_101730882	3300012987	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALAHESECMSADEFAHESETIGRLHIALARARAPSLH*
Ga0157378_121150942	3300013297	Miscanthus Rhizosphere	MEATMSGIDPWEKAADCERALQAASDPQQKKILKNLRYLWIALANECDVRSADEFARESEVIGRLHVELALLDRPSLH*
Ga0163163_130589401	3300014325	Switchgrass Rhizosphere	MEATMSRIDPWEKAADCERAIQTAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIALARARAPSLH*
Ga0157376_131458501	3300014969	Miscanthus Rhizosphere	MEATMSRIDKWEKAADCERAIQSAADPQQKTILKNLRYLWIALANESECMSADEFARESETIGRLHIELVRARALSLH*
Ga0173480_100811502	3300015200	Soil	MEATMSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH*
Ga0132255_1043374192	3300015374	Arabidopsis Rhizosphere	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFAREIEVIGRLHVELALVESPSLH*
Ga0132255_1049946351	3300015374	Arabidopsis Rhizosphere	WEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH*
Ga0163161_100767207	3300017792	Switchgrass Rhizosphere	ERAIQAAADPQQKTILKNLRYLWIALAHESECMSADEFAHESETIGRLHVALARARAPSL
Ga0190266_100526572	3300017965	Soil	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
Ga0190266_106492311	3300017965	Soil	VPGAAYSGAPEATMSRIDPWEKAADSERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH
Ga0184610_11065782	3300017997	Groundwater Sediment	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESRSLH
Ga0184604_101546392	3300018000	Groundwater Sediment	MSRIDPWEKAADCERAIQAAADPKQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH
Ga0184604_102851181	3300018000	Groundwater Sediment	QIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
Ga0184634_102051781	3300018031	Groundwater Sediment	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPSLH
Ga0184621_100219384	3300018054	Groundwater Sediment	MSQIDPWEKAADCERAIQAACDPQQKRILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
Ga0184616_100644865	3300018055	Groundwater Sediment	WEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSPDEFAHESETIGRLHLALARSRAPSLH
Ga0184617_11843222	3300018066	Groundwater Sediment	MSQIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHFALARAPASSLH
Ga0184635_100516241	3300018072	Groundwater Sediment	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPSLY
Ga0184624_103687643	3300018073	Groundwater Sediment	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSPDEFAHESETIGRLHVALARSRAPSLH
Ga0184625_101316763	3300018081	Groundwater Sediment	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH
Ga0190272_105576722	3300018429	Soil	MSQIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHFALARAPASSLH
Ga0190269_115269901	3300018465	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALSRARTPSLH
Ga0190270_101643873	3300018469	Soil	MSRIDPWEKAADCERALQADADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH
Ga0190270_119982272	3300018469	Soil	MSQIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPSLH
Ga0190270_124398121	3300018469	Soil	DPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
Ga0193701_11093281	3300019875	Soil	RMSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
Ga0193743_12438241	3300019889	Soil	MSQIDPWEKAADCERAIQAAADPKQKTILKNLRYLWIALANESECMSADEFAHESETIGR
Ga0193730_11306431	3300020002	Soil	MSQIDPWEKAADCERAIQAAADPQQKKILKNLRYLWIALANESDCMSADELARESEVIGRLHVELALAESPSLH
Ga0210381_100993601	3300021078	Groundwater Sediment	TMSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSPDEFAHESETIGRLHVALARSRAPSLH
Ga0210380_102552371	3300021082	Groundwater Sediment	MSRIDPWEKAADCERAIPAAADPQQKTILKNLRYLWIALANESECMSPDEFAHESETIGRLHVALARSRAPSLH
Ga0222623_102520221	3300022694	Groundwater Sediment	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADELARESEVIGRLHVELALAESPSLH
Ga0222622_100232783	3300022756	Groundwater Sediment	MARIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH
Ga0207647_101845541	3300025904	Corn Rhizosphere	PSHGWWGATEETMSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH
Ga0207700_105472763	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	KAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADGFAHESETIGRLHVALARARAPSLHQRPASDIIEAGARLLV
Ga0207701_109340022	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	IDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH
Ga0207689_1001864610	3300025942	Miscanthus Rhizosphere	MSGIDPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPS
Ga0207678_104680893	3300026067	Corn Rhizosphere	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARGPSLH
Ga0207702_109420863	3300026078	Corn Rhizosphere	DPWEKAADCERALQAASDPRQKKILKNLRYLWIALANECDVMSADEFARESEVIGRLHVELALLDRPSLH
Ga0207702_124313711	3300026078	Corn Rhizosphere	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARSRSPSLH
Ga0247820_108373331	3300028597	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVA
Ga0307322_102148511	3300028710	Soil	PIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPWLH
Ga0307298_101204361	3300028717	Soil	TASGRRNQSSIARFYPARREATMSQIDPWEKAADCERAIQAACDPQQKRILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
Ga0307317_100191101	3300028720	Soil	PWEKEADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
Ga0307317_102572092	3300028720	Soil	TEATMSPIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHIALARARAPSLH
Ga0307318_100234731	3300028744	Soil	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAE
Ga0307280_100477581	3300028768	Soil	WEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAESPSLH
Ga0307278_103421371	3300028878	Soil	MSQIDPWEKAADCERAIQAAADPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHV
Ga0307304_102583081	3300028885	Soil	MSQIDPWEKAADCERAIQAAGDPQQKKILKNLRYLWIALANESDCMSADEFARESEVIGRLHVELALAES
Ga0247827_110909751	3300028889	Soil	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADGFAHESETIGRLHVALARARAPSLH
Ga0308189_101064851	3300031058	Soil	KAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSPDEFAHESETIGRLHVALARSRAPSLH
Ga0308189_104410171	3300031058	Soil	TMSQIDPGEMSQIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSPDEFAHESETIGRLHIALARARAASLH
Ga0307498_100036066	3300031170	Soil	MSQIDPWEKAADCERAVQAAADPQQKKIFKNLRYLWIALANESDCMSADEFAREIEVIGRLHVELALVESPSLH
Ga0307500_101296541	3300031198	Soil	TKVPGAAYSGATEATMSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH
Ga0307497_100436352	3300031226	Soil	MSQIDPWEKAADCERAIQAAGDPQQKKILRNLRYLWIALANESDCMSADEFARESEVIGRLHVELALVESPSLH
Ga0310887_103651762	3300031547	Soil	MSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPLAP
Ga0307468_1001403712	3300031740	Hardwood Forest Soil	MSEIDPWEKAADCQRAVQAAIDPQHQAMLTHLRNLWIALGNERDFMSADELAKEAEAIGRLHVELVNSQRRVLH
Ga0310885_104993271	3300031943	Soil	MSEIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALAHESECMSADEFAHESETIGRLHIALARARA
Ga0310890_111011203	3300032075	Soil	KAADCERAIQAAADPQQKTILKNLRYLWIALANESECMSADEFAHESETIGRLHVALARARAPSLH
Ga0247829_115099781	3300033550	Soil	GGPCGTKVPGAAYSGATEAAMSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPSLH
Ga0364935_0196376_40_294	3300034151	Sediment	VAYSGATEAAMSRIDPWEKAADCERAIQAAADPQQKTILKNLRYLWIALANESDCMSADEFAHESETIGRLHVALARARAPSLH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067783

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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