Metagenome / Metatranscriptome Family F067718

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067718
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	65 residues
Representative Sequence	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES
Number of Associated Samples	99
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.40 %
% of genes near scaffold ends (potentially truncated)	29.60 %
% of genes from short scaffolds (< 2000 bps)	88.00 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.800 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.800 % of family members)
Environment Ontology (ENVO)	Unclassified (31.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.57% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13561	adh_short_C2	22.40
PF00456	Transketolase_N	12.00
PF04993	TfoX_N	4.00
PF13180	PDZ_2	3.20
PF00106	adh_short	2.40
PF11799	IMS_C	2.40
PF02452	PemK_toxin	2.40
PF04014	MazE_antitoxin	1.60
PF06983	3-dmu-9_3-mt	1.60
PF03551	PadR	1.60
PF03842	Silic_transp	0.80
PF00300	His_Phos_1	0.80
PF13365	Trypsin_2	0.80
PF07366	SnoaL	0.80
PF10604	Polyketide_cyc2	0.80
PF01139	RtcB	0.80
PF02678	Pirin	0.80
PF01872	RibD_C	0.80
PF13424	TPR_12	0.80
PF02779	Transket_pyr	0.80
PF08882	Acetone_carb_G	0.80
PF12773	DZR	0.80
PF00313	CSD	0.80
PF11837	INV_N	0.80
PF04655	APH_6_hur	0.80
PF13489	Methyltransf_23	0.80
PF00496	SBP_bac_5	0.80
PF00196	GerE	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	12.00
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	12.00
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	4.00
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	2.40
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.60
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.60
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.60
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	1.60
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	1.60
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.80
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.80
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.80
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.80
COG3570	Streptomycin 6-kinase	Defense mechanisms [V]	0.80
COG4647	Acetone carboxylase, gamma subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.80 %
Unclassified	root	N/A	11.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.80 %
Unclassified	root	N/A	11.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.80 %
Unclassified	root	N/A	11.20 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.00 %
Unclassified	root	N/A	11.20 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.40 %
Unclassified	root	N/A	11.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.00 %
Unclassified	root	N/A	11.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.20 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.80 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	38.40 %
Unclassified	root	N/A	11.20 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.80 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.40 %
Unclassified	root	N/A	11.20 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.80 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.40 %
Unclassified	root	N/A	11.20 %
Methylocaldum szegediense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → Methylocaldum szegediense	0.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0733167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101377194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101820671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3258	Open in IMG/M
3300000956\|JGI10216J12902_101814708	Not Available	1251	Open in IMG/M
3300000956\|JGI10216J12902_105170507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1539	Open in IMG/M
3300000956\|JGI10216J12902_109042701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1623	Open in IMG/M
3300000956\|JGI10216J12902_114007543	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300004156\|Ga0062589_102894444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300005093\|Ga0062594_103351313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300005146\|Ga0066817_1037188	Not Available	505	Open in IMG/M
3300005159\|Ga0066808_1018150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300005169\|Ga0066810_10096227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300005172\|Ga0066683_10066894	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300005172\|Ga0066683_10192529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1258	Open in IMG/M
3300005176\|Ga0066679_10320276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1011	Open in IMG/M
3300005178\|Ga0066688_10307986	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1022	Open in IMG/M
3300005187\|Ga0066675_10196802	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1414	Open in IMG/M
3300005187\|Ga0066675_10695541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300005332\|Ga0066388_100481124	Not Available	1880	Open in IMG/M
3300005332\|Ga0066388_103890300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300005334\|Ga0068869_101728038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300005347\|Ga0070668_102131212	Not Available	518	Open in IMG/M
3300005406\|Ga0070703_10000021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75160	Open in IMG/M
3300005440\|Ga0070705_100815293	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005445\|Ga0070708_100140234	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300005451\|Ga0066681_10226773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300005536\|Ga0070697_100236371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1560	Open in IMG/M
3300005536\|Ga0070697_100907903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300005544\|Ga0070686_101958669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300005558\|Ga0066698_11109367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005559\|Ga0066700_10998391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300005561\|Ga0066699_10008205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4958	Open in IMG/M
3300005764\|Ga0066903_103222416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300005937\|Ga0081455_10005496	All Organisms → cellular organisms → Bacteria	13892	Open in IMG/M
3300006032\|Ga0066696_10292962	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1056	Open in IMG/M
3300006046\|Ga0066652_100309079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300006046\|Ga0066652_100439733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1197	Open in IMG/M
3300006046\|Ga0066652_100565907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300006057\|Ga0075026_100534250	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300006573\|Ga0074055_10420983	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300006576\|Ga0074047_12077335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300006577\|Ga0074050_11773409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1228	Open in IMG/M
3300006580\|Ga0074049_12927686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300006606\|Ga0074062_12974418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300006794\|Ga0066658_10732447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300006871\|Ga0075434_101654513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300006881\|Ga0068865_100023331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4050	Open in IMG/M
3300006904\|Ga0075424_100597886	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300006953\|Ga0074063_13985036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → Methylocaldum szegediense	1144	Open in IMG/M
3300009137\|Ga0066709_100292705	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300009162\|Ga0075423_10446825	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300009162\|Ga0075423_11054515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300010085\|Ga0127445_1064701	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010322\|Ga0134084_10112646	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300011003\|Ga0138514_100035427	Not Available	963	Open in IMG/M
3300011003\|Ga0138514_100065604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300012198\|Ga0137364_10045190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2907	Open in IMG/M
3300012198\|Ga0137364_10186274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1516	Open in IMG/M
3300012199\|Ga0137383_10250900	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300012200\|Ga0137382_11099580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300012201\|Ga0137365_10036092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3782	Open in IMG/M
3300012206\|Ga0137380_10462128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300012206\|Ga0137380_11269673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300012207\|Ga0137381_11152368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	666	Open in IMG/M
3300012208\|Ga0137376_10526117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300012208\|Ga0137376_10821354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300012208\|Ga0137376_11804648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012211\|Ga0137377_10638096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1001	Open in IMG/M
3300012211\|Ga0137377_10813349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	867	Open in IMG/M
3300012892\|Ga0157294_10177449	Not Available	611	Open in IMG/M
3300012901\|Ga0157288_10210201	Not Available	627	Open in IMG/M
3300012955\|Ga0164298_10417812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300012957\|Ga0164303_10194662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1117	Open in IMG/M
3300012957\|Ga0164303_10428445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300012958\|Ga0164299_10394916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300012960\|Ga0164301_10560591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	836	Open in IMG/M
3300012961\|Ga0164302_11773804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300012984\|Ga0164309_10728763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300013764\|Ga0120111_1121608	Not Available	607	Open in IMG/M
3300014823\|Ga0120170_1038611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300015077\|Ga0173483_10236831	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300015356\|Ga0134073_10326634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	556	Open in IMG/M
3300017792\|Ga0163161_12075766	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300018027\|Ga0184605_10000404	All Organisms → cellular organisms → Bacteria	12794	Open in IMG/M
3300018027\|Ga0184605_10437357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300018054\|Ga0184621_10171833	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300018054\|Ga0184621_10364737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300018072\|Ga0184635_10365858	Not Available	551	Open in IMG/M
3300018431\|Ga0066655_10010933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3930	Open in IMG/M
3300018433\|Ga0066667_11572958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300018433\|Ga0066667_11769477	Not Available	558	Open in IMG/M
3300018468\|Ga0066662_10043108	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2809	Open in IMG/M
3300018482\|Ga0066669_10552179	Not Available	1004	Open in IMG/M
3300018482\|Ga0066669_10768742	All Organisms → cellular organisms → Bacteria → Terrabacteria group	851	Open in IMG/M
3300019361\|Ga0173482_10736669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300021080\|Ga0210382_10109890	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300021418\|Ga0193695_1015019	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300025901\|Ga0207688_10426371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300025938\|Ga0207704_10153722	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300026538\|Ga0209056_10145757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1825	Open in IMG/M
3300026542\|Ga0209805_1057634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1918	Open in IMG/M
3300026995\|Ga0208761_1023632	Not Available	596	Open in IMG/M
3300027748\|Ga0209689_1253837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300028381\|Ga0268264_11082597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300028716\|Ga0307311_10267655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300028717\|Ga0307298_10017619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1832	Open in IMG/M
3300028717\|Ga0307298_10056684	Not Available	1079	Open in IMG/M
3300028721\|Ga0307315_10225064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300028768\|Ga0307280_10076047	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300028784\|Ga0307282_10345901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300028791\|Ga0307290_10046126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1567	Open in IMG/M
3300028807\|Ga0307305_10091949	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300028807\|Ga0307305_10490898	Not Available	551	Open in IMG/M
3300028814\|Ga0307302_10450267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300028828\|Ga0307312_10298235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1049	Open in IMG/M
3300028828\|Ga0307312_10856210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300028875\|Ga0307289_10363608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300028878\|Ga0307278_10019343	All Organisms → cellular organisms → Bacteria	3154	Open in IMG/M
3300028878\|Ga0307278_10063672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1665	Open in IMG/M
3300028881\|Ga0307277_10388295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300028884\|Ga0307308_10280384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300031152\|Ga0307501_10140434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300031421\|Ga0308194_10294612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300033004\|Ga0335084_10020434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6728	Open in IMG/M
3300033551\|Ga0247830_10926917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.40%
Host-Associated	Host-Associated	9.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.80%
Plants	Host-Associated → Plants	9.60%
Aquatic	Environmental → Aquatic	5.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.60%
Sediment	Environmental → Aquatic → Sediment	4.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.00%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.20%
Loam	Environmental → Terrestrial → Soil → Loam	7.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.20%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.60%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.60%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_07331672	2228664022	Soil	MEAIHVCDPPMEQRSASDPTEWRCPECGTWWDVQVGVPPEVAPTYDFLTHQGIVPARWVARS
INPhiseqgaiiFebDRAFT_1013771942	3300000364	Soil	MTDGFHICDPPMEQRPGSAPTSWQCPDCATWWDIEPSVPPDTTPAFDFLSHQGIVPARWVRREQP*
INPhiseqgaiiFebDRAFT_1018206712	3300000364	Soil	MEAIHVCDPPMEQRSASDPTEWRCPECGTWWDVQVGVPPEVAPTYDFLTHQGIVPARWVARS*
JGI10216J12902_1018147082	3300000956	Soil	CETLGSGSMEAIHVCDPPMEQRSASDPTEWQCPECGTWWDVEVGVPPEVAPTYDFLTHQGIVPARWVQRT*
JGI10216J12902_1051705072	3300000956	Soil	MEGFHVCDPPMEQRSASSPTEWQCPECGTWWDVQVGVPPEVAPTYDFMTHQGIVPARWVRRESS*
JGI10216J12902_1090427012	3300000956	Soil	MEGFHVCDPPMEPRSASAPTEWQCPECGRWWDAVAATPPEVAPTYDFLTHQGIVPARWAPRDGG*
JGI10216J12902_1140075432	3300000956	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0062589_1028944442	3300004156	Soil	MEAIHVCDPPMEQRSASDPTEWQCPECGTWWDVQVGVPPEVAPTYDFLTHQGIVPARWVQRT*
Ga0062594_1033513132	3300005093	Soil	MEGLHICNPPMEQRLGSDPTSWQCSDCGTWWDVLPSVPPDVAPAYDFTSHQGTVPAKWVRRSD*
Ga0066817_10371882	3300005146	Soil	MDEIHVCDPPMEQRPASAPTEWRCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDN*
Ga0066808_10181502	3300005159	Soil	MDEFHICQPPMEQRPASASNEWQCPDCGTWWAIEAGVPSQVTPAYDFLAHQGVVPARWVLRESD*
Ga0066810_100962272	3300005169	Soil	MDELHICQPPMEQRPASASSEWQCPDCGTWWAIEAGVPSQVTPAYDFLAHQGVVPARWVLRESD*
Ga0066683_100668942	3300005172	Soil	MDQIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0066683_101925292	3300005172	Soil	VSDPMEGFHVCDPPMEQRSASAPMEWQCPECGTWWRAVAATPPEVAPTYDFLAHEGIVPARWVLRDND*
Ga0066679_103202762	3300005176	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRDS*
Ga0066688_103079861	3300005178	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSSWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRDS*
Ga0066675_101968021	3300005187	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRESD*
Ga0066675_106955412	3300005187	Soil	MDGFHICDPPMEQRPASAPTEWQCPECGSWWEVAAGVPQEVAPDYDFVAHRAIVPARWVPSESH*
Ga0066388_1004811242	3300005332	Tropical Forest Soil	MEAIHVCDPPMEQRSASDATEWQCPECGTWWDVQVGVPPEVVPTYDFLTHQGIVPARWVRRA*
Ga0066388_1038903002	3300005332	Tropical Forest Soil	MVDAFHICQPPMEPRSAADPTEWSCPECGTWWEVDAGIPPELSPTYDFLAHQEIVPARWVPRESG*
Ga0068869_1017280382	3300005334	Miscanthus Rhizosphere	GRRRARVTLMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0070668_1021312122	3300005347	Switchgrass Rhizosphere	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRD
Ga0070703_100000213	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MEEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0070705_1008152932	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0070708_1001402342	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDEIHACNPPMEQRPASAPTEWQCPECSSWWDIEPGVPSQVAPAYDFLTHQGTVPAKWVLRERG*
Ga0066681_102267732	3300005451	Soil	MEELHVCNPPMEQRSASVPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRESD*
Ga0070697_1002363713	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MEDIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES*
Ga0070697_1009079031	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RRRARVTVMDDIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRS*
Ga0070686_1019586691	3300005544	Switchgrass Rhizosphere	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLHPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0066698_111093671	3300005558	Soil	MEELHVCNPPMEQRSASAPTEWECPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRESD*
Ga0066700_109983911	3300005559	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSSWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0066699_100082057	3300005561	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSSWWDLRPSVPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0066903_1032224162	3300005764	Tropical Forest Soil	MDQLHVCDPPMEQRSASEPSEWRCPECGSWWDVEAAVPAQVPPDYDFMTHQGIVPARWVRRNGS*
Ga0081455_1000549611	3300005937	Tabebuia Heterophylla Rhizosphere	MTEIHACEPPMEQRSTAAPPEWRCPECGTWWDAEPRVAPEVVPAFDFLTHQGIVPARWVPRGIG*
Ga0066696_102929621	3300006032	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSSWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVR
Ga0066652_1003090792	3300006046	Soil	MEELHVCNPPMEQRSASAPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRD*
Ga0066652_1004397331	3300006046	Soil	CDPPMEPRSATAPTEWQCPDCGTWWRVEAGVPPEVAPTFDFLTHQQIVPARWVVRDSD*
Ga0066652_1005659072	3300006046	Soil	MDGFHICDPPMEQRPASAPTEWQCPECGSWWEVAAGVPQEVAPDYDFLAHRAIVPARWVPSESH*
Ga0075026_1005342502	3300006057	Watersheds	MVDELHACQPPMEQRPISAPTEWQCPECASWWDIEPGVPPQVDPAYDFLTHQGILPAKWVLRESG*
Ga0074055_104209831	3300006573	Soil	MVDELHACQPPMERRPISAPTEWQCPECASWWDIEPGVPPQVDPAYDFLTHQGILPAKWVLRESG*
Ga0074047_120773353	3300006576	Soil	MDELHICQPPMEQRPASASNEWQCPDCGTWWAIEAGVPSQVTPAYDFLAHQGVVPARWVLRESD*
Ga0074050_117734093	3300006577	Soil	MDEFHICQPPMEQRPASASSEWQCPDCGTWWAIEAGVPSQVTPAYDFLAHQGVVPARWVLRESD*
Ga0074049_129276862	3300006580	Soil	MDELHICQPPMEQRPASASGEWQCPDCGTWWAIEAGVPSQVTPAYDFLAHQGVVPARWVLRESD*
Ga0074062_129744181	3300006606	Soil	MEELHICQPPMEQRPASASSEWQCPDCGTWWAIEAGVPSQVTPAYDFLAHQGVVPARWVLRESD*
Ga0066658_107324471	3300006794	Soil	VCDPPMEQRPASAPTEWQCPECSSWWDLQPSVPPEVAPTYDFLTHQGIVPVKWVRRDS*
Ga0075434_1016545131	3300006871	Populus Rhizosphere	TPHAGRGRARVTNMDAIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0068865_1000233313	3300006881	Miscanthus Rhizosphere	MDEIHVCDPPMEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0075424_1005978861	3300006904	Populus Rhizosphere	HGRVHPDRLRQHRRLLTPHAGRGRARVTNMDAIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0074063_139850363	3300006953	Soil	MEELHICQPPMEQRPASASSEWQCPDCGTWWAIEAGVPSQVTPAYDFLAHQGVVPARWVLRESN*
Ga0066709_1002927051	3300009137	Grasslands Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPAFDFLTHQGIVPAKWVRRDS*
Ga0075423_104468253	3300009162	Populus Rhizosphere	MDAIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0075423_110545152	3300009162	Populus Rhizosphere	MEAIHVCDPPMEQRSASDPTEWRCPECGTWWDVQVGVPPEVAPSYDFLTHQGIVPARWVPRS*
Ga0127445_10647012	3300010085	Grasslands Soil	MAGFHVCDPPMDQRSTSAPSEWQCPDCGSWWDVEPSVPPQVYPTYDFLAHQGIVPARWVLRASG*
Ga0134084_101126462	3300010322	Grasslands Soil	MDQIHVCDPPMEQRPASAPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRESD*
Ga0138514_1000354271	3300011003	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECATWWDLQPSVPPEVAPSYDFLTHQGIVPAKWVRRDS
Ga0138514_1000656041	3300011003	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRREN*
Ga0137364_100451903	3300012198	Vadose Zone Soil	MEELHVCNPPMEQRSASAPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAQWVRRESD*
Ga0137364_101862742	3300012198	Vadose Zone Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPAFDFLTHQGVVPAKWVRRDS*
Ga0137383_102509003	3300012199	Vadose Zone Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRGS*
Ga0137382_110995802	3300012200	Vadose Zone Soil	MEELHVCNPPMEQRSASAPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVTAKWVRRESD*
Ga0137365_100360925	3300012201	Vadose Zone Soil	MDEIHVCDPPMEQRPVSAPTEWRCPECSTWWDLQPSVPPEVAPTYDCLTHQGIVPAKWVRRES*
Ga0137380_104621284	3300012206	Vadose Zone Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSSWWDLQPSIPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0137380_112696732	3300012206	Vadose Zone Soil	MEEIHVCDPPMEQRPASAPTEWRCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0137381_111523682	3300012207	Vadose Zone Soil	MEEELHICQPPMEQRSVSAPTEWQCPDCASWWDIAPGVPPQVAPAYDFMTHQGVVPAKWVLREDG*
Ga0137376_105261172	3300012208	Vadose Zone Soil	MEELHVCNPPMEQRSASAPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRESD*
Ga0137376_108213542	3300012208	Vadose Zone Soil	MLMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0137376_118046482	3300012208	Vadose Zone Soil	EIHVCDPPMEQRPASAPTEWRCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0137377_106380961	3300012211	Vadose Zone Soil	HICQPPMEQRSVSAPKEWQCPDCASWWDIAPGVPPQVAPAYDFMTHQGVVPAKWVLREDG
Ga0137377_108133491	3300012211	Vadose Zone Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSSWWDLQPSIPPEVAPTYDFLTHQGIVPAKWVRRGS*
Ga0157294_101774492	3300012892	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES*
Ga0157288_102102011	3300012901	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPSYDFLTHQGIVPAKWVRRES*
Ga0164298_104178122	3300012955	Soil	MDVIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES*
Ga0164303_101946621	3300012957	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPAELAPTYDFLTHQGIVLAKWVRRES*
Ga0164303_104284453	3300012957	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPAYDFLTHQGVVPAKWVRRES*
Ga0164299_103949161	3300012958	Soil	HVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0164301_105605911	3300012960	Soil	QHRRLLTNAHTGPRRARVTLMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES*
Ga0164302_117738042	3300012961	Soil	TGPRRARVTLMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES*
Ga0164309_107287632	3300012984	Soil	DEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS*
Ga0120111_11216081	3300013764	Permafrost	MDEIHVCDPPMEQRPASAPTEWQCPECSSWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRDS*
Ga0120170_10386112	3300014823	Permafrost	MDEIHVCDPPMEQRPASAPTEWQCPECSCWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES*
Ga0173483_102368312	3300015077	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPSYDFLTHQGIVPAKWVRRDS*
Ga0134073_103266342	3300015356	Grasslands Soil	RTPHAGRRRARVILMDEIHVCDPPMEQRPASAPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRESD*
Ga0163161_120757662	3300017792	Switchgrass Rhizosphere	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS
Ga0184605_100004042	3300018027	Groundwater Sediment	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0184605_104373572	3300018027	Groundwater Sediment	LTDARPGRRRARVNPMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPGFDFLTHQGIVPAKWVRRESV
Ga0184621_101718332	3300018054	Groundwater Sediment	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDPPPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0184621_103647371	3300018054	Groundwater Sediment	MDEIHVCDPPMEQRPASAPTEWQCPECSTLWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0184635_103658582	3300018072	Groundwater Sediment	MEEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPSYDFLTHQGIVPAKWVRRES
Ga0066655_100109333	3300018431	Grasslands Soil	MDQIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES
Ga0066667_115729582	3300018433	Grasslands Soil	MEEIHVCDPPMEQRPASAPTEWQCPDCSSWWDLEPSVPPEVAPTYDFLTHQGIVPAKWVRREG
Ga0066667_117694772	3300018433	Grasslands Soil	NLMEELHVCNPPMEQRSASAPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRESD
Ga0066662_100431082	3300018468	Grasslands Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRDS
Ga0066669_105521792	3300018482	Grasslands Soil	MEELHVCNPPMEQRSASVPTEWQCPECSSWWDVEPGVPPEVAPAYDFLTHQGIVPAKWVRRESD
Ga0066669_107687421	3300018482	Grasslands Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSSWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRDS
Ga0173482_107366691	3300019361	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPSYDFLTHQGIVPAKWVRRDS
Ga0210382_101098902	3300021080	Groundwater Sediment	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRREG
Ga0193695_10150194	3300021418	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRGS
Ga0207688_104263711	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQG
Ga0207704_101537221	3300025938	Miscanthus Rhizosphere	MDEIHVCDPPMEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS
Ga0209056_101457573	3300026538	Soil	MDQIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRDS
Ga0209805_10576342	3300026542	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSSWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES
Ga0208761_10236321	3300026995	Soil	MDEIHVCDPPMEQRPASAPTEWRCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDN
Ga0209689_12538372	3300027748	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPTYDFLTHQGIVPAKWVRRES
Ga0268264_110825971	3300028381	Switchgrass Rhizosphere	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAK
Ga0307311_102676552	3300028716	Soil	PMEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307298_100176191	3300028717	Soil	PMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307298_100566842	3300028717	Soil	MDEIHVCDPPMEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307315_102250641	3300028721	Soil	DGAHAGRRTARVTLMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307280_100760471	3300028768	Soil	PPMEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307282_103459012	3300028784	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAK
Ga0307290_100461263	3300028791	Soil	LLTNAHAGPRRARVTPMDEIHVCNPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307305_100919493	3300028807	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKW
Ga0307305_104908982	3300028807	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPEVAPAFDFLTHQGIVPAKWVRRESV
Ga0307302_104502672	3300028814	Soil	EHRRARVTLMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307312_102982351	3300028828	Soil	MDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVR
Ga0307312_108562102	3300028828	Soil	QHGWLLTNAHAGRRRARVTLMDEIHVCDPPMEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307289_103636081	3300028875	Soil	MEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307278_100193435	3300028878	Soil	MEEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRETG
Ga0307278_100636723	3300028878	Soil	EIHVCDPPMEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRE
Ga0307277_103882952	3300028881	Soil	MAEELHICQPPMELRVASAPTEWRCPECGSWWDVEPAVPPEVAPAYDFLTHQGTVPAKWVRRDDQELPGAD
Ga0307308_102803841	3300028884	Soil	LRQHRRLLTNAHAGPRRARVTPMDEIHVCDPPMEQRPASAPTEWQCPDCSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0307501_101404341	3300031152	Soil	PATEDAHAGRRRARVTLMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0308194_102946121	3300031421	Soil	PMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRES
Ga0335084_100204348	3300033004	Soil	MDELHICQPPMEQRPASASSEWRCPECGTWWTIQPVPAQVAPAYDFLAHQGVVPARWILKESG
Ga0247830_109269172	3300033551	Soil	HQGPEELGSPLMDEIHVCDPPMEQRPASAPTEWQCPECSTWWDLQPSVPPELAPTYDFLTHQGIVPAKWVRRDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067718

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences