Metagenome Family F067526

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067526
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	48 residues
Representative Sequence	MPVMGGDRADAGLVVALLGPVEIGPAGGAMTPVAQPRLRVLLGL
Number of Associated Samples	93
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.80 %
% of genes near scaffold ends (potentially truncated)	96.80 %
% of genes from short scaffolds (< 2000 bps)	95.20 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.600 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.400 % of family members)
Environment Ontology (ENVO)	Unclassified (40.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 8.33% Coil/Unstructured: 91.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF03083	MtN3_slv	3.20
PF00582	Usp	3.20
PF00571	CBS	2.40
PF13683	rve_3	2.40
PF01738	DLH	2.40
PF02782	FGGY_C	1.60
PF01268	FTHFS	1.60
PF00561	Abhydrolase_1	0.80
PF00903	Glyoxalase	0.80
PF13424	TPR_12	0.80
PF04185	Phosphoesterase	0.80
PF03473	MOSC	0.80
PF13847	Methyltransf_31	0.80
PF03631	Virul_fac_BrkB	0.80
PF04073	tRNA_edit	0.80
PF01833	TIG	0.80
PF16912	Glu_dehyd_C	0.80
PF08241	Methyltransf_11	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG4095	Sugar transporter, SemiSWEET family, contains PQ motif	Carbohydrate transport and metabolism [G]	3.20
COG2759	Formyltetrahydrofolate synthetase	Nucleotide transport and metabolism [F]	1.60
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.80
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
All Organisms	root	All Organisms	34.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
cellular organisms	root	All Organisms → cellular organisms	34.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.60 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.40 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.60 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.60 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.40 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.60 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.60 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.40 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.80 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.60 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.40 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.80 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.80 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.60 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.40 %
Streptomyces sp. Go-475	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Go-475	0.80 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.80 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005439\|Ga0070711_100396789	Not Available	1119	Open in IMG/M
3300005468\|Ga0070707_100484080	Not Available	1199	Open in IMG/M
3300005536\|Ga0070697_101423872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300005556\|Ga0066707_11032274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300005764\|Ga0066903_108036009	Not Available	541	Open in IMG/M
3300005995\|Ga0066790_10534463	Not Available	501	Open in IMG/M
3300006804\|Ga0079221_10096541	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300006804\|Ga0079221_10705005	Not Available	704	Open in IMG/M
3300007265\|Ga0099794_10720449	Not Available	532	Open in IMG/M
3300009524\|Ga0116225_1197857	Not Available	909	Open in IMG/M
3300009683\|Ga0116224_10180552	Not Available	1013	Open in IMG/M
3300009698\|Ga0116216_10797277	Not Available	566	Open in IMG/M
3300009700\|Ga0116217_10128981	Not Available	1705	Open in IMG/M
3300009700\|Ga0116217_10928737	Not Available	533	Open in IMG/M
3300009839\|Ga0116223_10299470	Not Available	960	Open in IMG/M
3300010341\|Ga0074045_10463305	Not Available	817	Open in IMG/M
3300010343\|Ga0074044_10559467	Not Available	746	Open in IMG/M
3300010358\|Ga0126370_11075993	Not Available	739	Open in IMG/M
3300010360\|Ga0126372_11377115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300010362\|Ga0126377_10567059	Not Available	1176	Open in IMG/M
3300010366\|Ga0126379_10591549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1194	Open in IMG/M
3300010373\|Ga0134128_11286684	Not Available	806	Open in IMG/M
3300010376\|Ga0126381_102852230	Not Available	689	Open in IMG/M
3300010379\|Ga0136449_103803262	Not Available	568	Open in IMG/M
3300010397\|Ga0134124_12521527	Not Available	556	Open in IMG/M
3300011269\|Ga0137392_10147954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1893	Open in IMG/M
3300012207\|Ga0137381_11223308	Not Available	644	Open in IMG/M
3300012210\|Ga0137378_10044818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3965	Open in IMG/M
3300012349\|Ga0137387_10569573	Not Available	821	Open in IMG/M
3300012989\|Ga0164305_10385566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1068	Open in IMG/M
3300014969\|Ga0157376_11802569	Not Available	648	Open in IMG/M
3300016270\|Ga0182036_10091434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2043	Open in IMG/M
3300016294\|Ga0182041_12269744	Not Available	507	Open in IMG/M
3300016387\|Ga0182040_11573621	Not Available	559	Open in IMG/M
3300016404\|Ga0182037_11395173	Not Available	619	Open in IMG/M
3300017821\|Ga0187812_1065593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300017823\|Ga0187818_10083339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1380	Open in IMG/M
3300017924\|Ga0187820_1036140	Not Available	1298	Open in IMG/M
3300017924\|Ga0187820_1049251	Not Available	1135	Open in IMG/M
3300017926\|Ga0187807_1002228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6088	Open in IMG/M
3300017926\|Ga0187807_1044373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1376	Open in IMG/M
3300017926\|Ga0187807_1076255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1046	Open in IMG/M
3300017932\|Ga0187814_10275775	Not Available	640	Open in IMG/M
3300017932\|Ga0187814_10301213	Not Available	614	Open in IMG/M
3300017942\|Ga0187808_10246269	Not Available	799	Open in IMG/M
3300017942\|Ga0187808_10475427	Not Available	577	Open in IMG/M
3300017943\|Ga0187819_10238883	Not Available	1065	Open in IMG/M
3300017955\|Ga0187817_10255548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1116	Open in IMG/M
3300017961\|Ga0187778_10037411	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300017974\|Ga0187777_10458602	Not Available	887	Open in IMG/M
3300017974\|Ga0187777_11155908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Go-475	565	Open in IMG/M
3300017974\|Ga0187777_11268717	Not Available	540	Open in IMG/M
3300018001\|Ga0187815_10045094	Not Available	1859	Open in IMG/M
3300018007\|Ga0187805_10394370	Not Available	642	Open in IMG/M
3300018007\|Ga0187805_10480125	Not Available	581	Open in IMG/M
3300018025\|Ga0187885_10241716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	827	Open in IMG/M
3300018058\|Ga0187766_10609172	Not Available	746	Open in IMG/M
3300018085\|Ga0187772_10365039	Not Available	1000	Open in IMG/M
3300018085\|Ga0187772_10409824	Not Available	945	Open in IMG/M
3300018085\|Ga0187772_10788688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300018086\|Ga0187769_11028884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300020579\|Ga0210407_11069452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300020582\|Ga0210395_10906159	Not Available	655	Open in IMG/M
3300020583\|Ga0210401_11417580	Not Available	552	Open in IMG/M
3300021178\|Ga0210408_10405104	Not Available	1086	Open in IMG/M
3300021405\|Ga0210387_11077595	Not Available	701	Open in IMG/M
3300021479\|Ga0210410_11227224	Not Available	642	Open in IMG/M
3300021560\|Ga0126371_10818086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1077	Open in IMG/M
3300025928\|Ga0207700_11552622	Not Available	587	Open in IMG/M
3300027497\|Ga0208199_1123267	Not Available	530	Open in IMG/M
3300027725\|Ga0209178_1168225	Not Available	764	Open in IMG/M
3300030494\|Ga0310037_10023980	All Organisms → cellular organisms → Bacteria	2943	Open in IMG/M
3300030494\|Ga0310037_10233223	Not Available	804	Open in IMG/M
3300030659\|Ga0316363_10195331	Not Available	846	Open in IMG/M
3300030659\|Ga0316363_10343134	Not Available	590	Open in IMG/M
3300031543\|Ga0318516_10770221	Not Available	544	Open in IMG/M
3300031544\|Ga0318534_10818190	Not Available	523	Open in IMG/M
3300031564\|Ga0318573_10134960	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300031564\|Ga0318573_10153421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1209	Open in IMG/M
3300031564\|Ga0318573_10651084	Not Available	567	Open in IMG/M
3300031668\|Ga0318542_10670834	Not Available	542	Open in IMG/M
3300031679\|Ga0318561_10776725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300031713\|Ga0318496_10114851	Not Available	1454	Open in IMG/M
3300031713\|Ga0318496_10488529	Not Available	681	Open in IMG/M
3300031713\|Ga0318496_10512981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300031713\|Ga0318496_10734767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300031713\|Ga0318496_10747331	Not Available	539	Open in IMG/M
3300031723\|Ga0318493_10156077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1184	Open in IMG/M
3300031723\|Ga0318493_10302054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300031723\|Ga0318493_10420279	Not Available	733	Open in IMG/M
3300031723\|Ga0318493_10675535	Not Available	578	Open in IMG/M
3300031744\|Ga0306918_10585345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300031748\|Ga0318492_10604641	Not Available	585	Open in IMG/M
3300031748\|Ga0318492_10632105	Not Available	572	Open in IMG/M
3300031751\|Ga0318494_10041237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2409	Open in IMG/M
3300031751\|Ga0318494_10111663	Not Available	1516	Open in IMG/M
3300031751\|Ga0318494_10118649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1472	Open in IMG/M
3300031751\|Ga0318494_10346651	Not Available	859	Open in IMG/M
3300031770\|Ga0318521_10357066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300031782\|Ga0318552_10236232	Not Available	927	Open in IMG/M
3300031819\|Ga0318568_10339656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	934	Open in IMG/M
3300031819\|Ga0318568_10805519	Not Available	583	Open in IMG/M
3300031821\|Ga0318567_10639021	Not Available	604	Open in IMG/M
3300031831\|Ga0318564_10433008	Not Available	574	Open in IMG/M
3300031845\|Ga0318511_10632432	Not Available	500	Open in IMG/M
3300031910\|Ga0306923_10285167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1888	Open in IMG/M
3300031947\|Ga0310909_10770753	Not Available	796	Open in IMG/M
3300031954\|Ga0306926_12579005	Not Available	555	Open in IMG/M
3300032001\|Ga0306922_12196257	Not Available	532	Open in IMG/M
3300032008\|Ga0318562_10548109	Not Available	669	Open in IMG/M
3300032009\|Ga0318563_10235416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	989	Open in IMG/M
3300032063\|Ga0318504_10233725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	863	Open in IMG/M
3300032065\|Ga0318513_10180657	Not Available	1013	Open in IMG/M
3300032067\|Ga0318524_10128662	Not Available	1270	Open in IMG/M
3300032068\|Ga0318553_10094088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1522	Open in IMG/M
3300032068\|Ga0318553_10231240	Not Available	965	Open in IMG/M
3300032068\|Ga0318553_10275903	Not Available	879	Open in IMG/M
3300032089\|Ga0318525_10071894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1738	Open in IMG/M
3300032089\|Ga0318525_10391913	Not Available	712	Open in IMG/M
3300032160\|Ga0311301_12252679	Not Available	622	Open in IMG/M
3300032180\|Ga0307471_102787668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300032205\|Ga0307472_101824552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300032261\|Ga0306920_101386691	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300033290\|Ga0318519_10565307	Not Available	689	Open in IMG/M
3300033290\|Ga0318519_10720768	Not Available	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.20%
Host-Associated	Host-Associated	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.60%
Aquatic	Environmental → Aquatic	13.60%
Plants	Host-Associated → Plants	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.60%
Freshwater	Environmental → Aquatic → Freshwater	13.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.60%
Loam	Environmental → Terrestrial → Soil → Loam	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	12.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	12.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.20%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070711_1003967892	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGGELAGARVMVGLLGPVELGPAGGVMAPVAQPRLRVLLGLL
Ga0070707_1004840803	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPVVGRDGADARLMVGLLGPVEIGPAAGVMAPVAQPRLRVLLGLLGVAAGR
Ga0070697_1014238721	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPVMGGDRADAGLVVALLGPVEVGPAGGAVTPLSQPRLRVLLGLLGVAAGRVVSAEALVD
Ga0066707_110322742	3300005556	Soil	MPVMGRDLADARLVVALLGPVELGPAGGVMAPVAQPRLRVLLGLLGVAAGRVV
Ga0066903_1080360091	3300005764	Tropical Forest Soil	MPGMGGDAAGARVVVGLLGPVEIGPAGGVMAPVAQPRLRVLLG
Ga0066790_105344632	3300005995	Soil	MGGDPADVGLAVALLGPVEIGPAGGVLAPVAQPRLRVLLGLLGVAGGRVV
Ga0079221_100965413	3300006804	Agricultural Soil	MPGMGGDHADTRLAVGLLGPVEIGPAGGVMAAVPQPR
Ga0079221_107050053	3300006804	Agricultural Soil	MPVMGGELAGARVMVGLLGPVELGPAGGVMAPVAQPRLRVLLGLLGVAA
Ga0099794_107204491	3300007265	Vadose Zone Soil	MGGNSGGGPGLVLGLLGPVEIGRSGGMMAPVPQPRLRVLLALLGVAAGRVVSWEALV
Ga0116225_11978572	3300009524	Peatlands Soil	MGGDRSDAGLVVALLDPVEVGPAGGVIAPVAQPRLRVLLGLLGVVDGRVVTAEALVDGLWEE
Ga0116224_101805523	3300009683	Peatlands Soil	MGGDRSDAGLVVALLDPVEVGPAGGVMAPVAQPRLRVLLGLLGVVDGRVVTA
Ga0116216_107972771	3300009698	Peatlands Soil	MGGDRARADLAVALLGSVEVGPAGGVLTPVAQPRLRVLLGLLGVAGGRMVTAEALV
Ga0116217_101289813	3300009700	Peatlands Soil	MPVMGGDRSEAGLLVALLGPVEVGPAGGMMAPAAQPR
Ga0116217_109287371	3300009700	Peatlands Soil	MGGDRAGADLAVALLGSVEVGPAGGVLTPVAQPRLRHWRQHPA
Ga0116223_102994701	3300009839	Peatlands Soil	MGGDRSDGGLVVALLGPVEVGPAGGVMAPVAQPRLRVLLGLLGVTEGRVV
Ga0074045_104633051	3300010341	Bog Forest Soil	MLVMGGDRADAGLVVVLLGPVEIGPAGGVMTPVAQPRLRVLLGLLGVA
Ga0074044_105594672	3300010343	Bog Forest Soil	MGGDRAGADLAVALLGSVEVGPAGGVLTPVAQPRLRVL
Ga0126370_110759931	3300010358	Tropical Forest Soil	MGGDAAEARVMVALLGPVEIGPAGGALAGVPQPRL
Ga0126372_113771152	3300010360	Tropical Forest Soil	MGGDAAGARVMVRLLGPVEIGLPGGPTAPVAQPRLRVLLGLLAVAEGRLV
Ga0126377_105670593	3300010362	Tropical Forest Soil	MPVMGGERGGADLVVALLGPVEIGAAGGVMSPVSQPRL
Ga0126379_105915493	3300010366	Tropical Forest Soil	MGRDAADARVMVSLLGPVEIGPAGGALVGVAQPRLRVLLGLLAVAPGRVVS
Ga0134128_112866841	3300010373	Terrestrial Soil	MGGELAGARVMVGLLGPVELGPAGGVMAPVAQPRLRVLLGLLG
Ga0126381_1028522301	3300010376	Tropical Forest Soil	MGADPVRGGLLVGLLGPVEIGPAAGVMASVAQPQLRVLLGLLGV
Ga0136449_1038032621	3300010379	Peatlands Soil	MLVMGSNAADTGLAVGLLGPVEIGPAGGVMTPVAQPRLRMLLGLLG
Ga0134124_125215271	3300010397	Terrestrial Soil	MGRDAVDARVMVGLLGPVEIGLSGGPAAPVAQPRLRVLLGLLAVA
Ga0137392_101479543	3300011269	Vadose Zone Soil	MGGDLADARLMVALLGPVELGPAGGVMAPVAQPRLRVLLGLLGVAAGRVVS
Ga0137381_112233081	3300012207	Vadose Zone Soil	MGGDRADAGLVVALLGPVEIGPAGSTMTPVARPRLRVLLGLLAVVEGRMVTAEALV
Ga0137378_100448181	3300012210	Vadose Zone Soil	MGGDRADAGLVVALLGPVEIGPAGSTMTPVARPRLRVLLGLLAVVEGRM
Ga0137387_105695731	3300012349	Vadose Zone Soil	MGGDRADAGLVVALLGPVEIGPAGSTMTPVARPRLRVLL
Ga0164305_103855661	3300012989	Soil	MGRDAVDARVMVGLLGPVEIGLSGGPAAPVAQPRLRVLLGL
Ga0157376_118025691	3300014969	Miscanthus Rhizosphere	MGRDAVDARVMVGLLGPVEIGLSGGPAAPVAQPRLRVLLGLLAVAGGRLVSTEALVD
Ga0182036_100914343	3300016270	Soil	MPVMGGGRDGTGVVVALLGPVEIGPAGGVMAGVAQPRLRCF
Ga0182041_122697441	3300016294	Soil	MPVMGGERGSAGLVVGLLGPVEIGPAGGTSTPVAQPRLRVLLALLGVAAGRVV
Ga0182040_115736211	3300016387	Soil	MPVMGGEPTDGGVAVALLGPVEIGRPGGVMAGVAQPRLRVRLGLLGVASGRVVSAEALVD
Ga0182037_113951731	3300016404	Soil	MPLMGEVPAGGGLAVGSLGPVEIGPAGGVMAPVPPPRLRVLLGLLGVAAGRAVSAEALVD
Ga0187812_10655932	3300017821	Freshwater Sediment	MPVMGGDPAGGVVVALLGSVEVGPAGGVMAPVAQPRLRVLLGLLGVTDGRMVTAEA
Ga0187818_100833392	3300017823	Freshwater Sediment	MPVMGGDPAGGVVVALLGPVEVGPAGGVMAPVAQPRLRVLLGLLGVTD
Ga0187820_10361401	3300017924	Freshwater Sediment	MPVMGGDRADAGMVVALLGPVEVGLAGGAMTAVAQPRLRVLLGLLAAAGGRVVTAEAL
Ga0187820_10492512	3300017924	Freshwater Sediment	MPVMGGDRAEAGLVVALLGPVEVGRAGGVRTPVAQPRLRVLLGLLGV
Ga0187807_10022287	3300017926	Freshwater Sediment	MPVMGGDPAGGVAVALLGSVEVGPAGGVMAPVAQPRLRVLLGLLGVTEGRVVTAEALVDGLW
Ga0187807_10443733	3300017926	Freshwater Sediment	MPVMGADRADAGLVVALLGPVEVGPAGGAMTPVAQPRLRVLLGLLGV
Ga0187807_10762551	3300017926	Freshwater Sediment	MGGDRADAGLVVALLGPVEVGPAGGAMTPVAQPRLRVLLGLLGV
Ga0187814_102757752	3300017932	Freshwater Sediment	MPVMGGDRSDAGLVVALLGPVEVGPAGGVMAPVAQPRLRVLLGLLGVV
Ga0187814_103012131	3300017932	Freshwater Sediment	MPVMGADRADAGLVVALLGPVEVGPAGGAMTPVAQPRLRVLLGLL
Ga0187808_102462691	3300017942	Freshwater Sediment	MPVMGGDRAEAGLVVALLGPVEVGRAGGVRTPVAQPRLRVLLGLLGVTEGR
Ga0187808_104754272	3300017942	Freshwater Sediment	MPVMGGDPAGGVAVALLGPVEIGPAGGVMAPVAQP
Ga0187819_102388831	3300017943	Freshwater Sediment	MPVMGADRADAGLVVALLGPVEVGPAGGAMTPVAQPRLRV
Ga0187817_102555483	3300017955	Freshwater Sediment	MPVMGADRADAGLVVALLGPVEVGPAGGAMTPVAQP
Ga0187778_100374111	3300017961	Tropical Peatland	MPVMGGDRAEAGLLVALLGPVEVGRAGGARTPVAQPRLRVLLGLLG
Ga0187777_104586022	3300017974	Tropical Peatland	MPVMGGDRGDAGLVVALLGPVEVRPAGGTIAPVAQPRLRVLLGLLGVAAGRMVGVEALV
Ga0187777_111559082	3300017974	Tropical Peatland	MPVMGGDRADAGLVVALLGPVEIGPAGGAVMPVAQPR
Ga0187777_112687171	3300017974	Tropical Peatland	MPVMGGDRADAGLMVAVLGPVEIGPAGGAVMPVAQPRLRVLLGLLGVAGGRM
Ga0187815_100450941	3300018001	Freshwater Sediment	MPVMGGDPAGGVAVALLGSVEVGPAGGMMAPVAQPRLRVLLGLLGVTEGRVVT
Ga0187805_103943701	3300018007	Freshwater Sediment	MPVMGGDPAGGGVVVALLGSVEVGPAGGVMAPVAQPRLRVLLGLLGVTEGRV
Ga0187805_104801251	3300018007	Freshwater Sediment	MPVMGGDRAGGGVVVALLGPVEAGPAGGVMAPVAQPRLRVLLGLLGVTEGR
Ga0187885_102417162	3300018025	Peatland	MPVMGGDRADVGLAVALLGQVEIGPAGGALTPVAQPRLRVLLGLLGVAGGRVVTAEALVGGLWEEEWSPARER
Ga0187766_106091721	3300018058	Tropical Peatland	MPVMGGDRAEAGLVVALLGPVEVGRAGGVRTPVAQPRLR
Ga0187772_103650393	3300018085	Tropical Peatland	MPVMGGDRADAGLVVALLGPVEIGPAGGAMTPVAQPRLRVLLGL
Ga0187772_104098241	3300018085	Tropical Peatland	MLVMGGDRPGAGLVVALLGSVEIAPAGGMLTPVAQPRLRVLLGLLGVAQ
Ga0187772_107886881	3300018085	Tropical Peatland	MPVMGADPARGGLVVALLGPVEIGPAGGAMTPVAQPR
Ga0187769_110288841	3300018086	Tropical Peatland	MPVMGGDRADAGLVVALLGPVEAGLAGGPMTPVAQPR
Ga0210407_110694521	3300020579	Soil	MPVMGGDTAGLVVALLGPVEIGQAGEAQAPVPQPRLRVLLGLLGVADGRMVTT
Ga0210395_109061592	3300020582	Soil	MPGMGGDAAGARVMVGLLGPVEIGLAGGVMAPVAQPRLRVLLGLLSVV
Ga0210401_114175801	3300020583	Soil	MPVMGGDRSDAGLVVALLGPVEVGPAGGVMASVAQPRLRV
Ga0210408_104051041	3300021178	Soil	MPVMGSTTAGTGLVVGLLGPVEIGPAGGVLTPVAQPRLRVLLGLLG
Ga0210387_110775952	3300021405	Soil	MPVMGGDHPDAGLAVALLGSVEIGSAGGTTMPVVQ
Ga0210410_112272241	3300021479	Soil	MPVMGGDRPDAGLAVTLLGPVEIGAAGGIMTPVAQPRLRVLLGLL
Ga0126371_108180861	3300021560	Tropical Forest Soil	MPGMGGDAAGARVVVGLLGPVEIGPAGGVMAPVAQPRLRVLLGLLSVV
Ga0207700_115526222	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGARRPYDAGMGADHSGADVVVALLGPVELGPAGGAMAGVAQPQLRVLLGLLGVAAGRVISAETLV
Ga0208199_11232671	3300027497	Peatlands Soil	MPVMGGDPAGGVVVALLGTVEVGPAGGVMAPVAQPRLRVLLGLLGVTEGRV
Ga0209178_11682252	3300027725	Agricultural Soil	MPGMGGDHADTRLAVGLLGPVEIGPAGGVMAAVPQPRLRVLLGLLAVAAGR
Ga0310037_100239804	3300030494	Peatlands Soil	MAVMGGDRADADLAVALLGPVEIGSAGGVTTPVAQPRLRVLLGLLG
Ga0310037_102332232	3300030494	Peatlands Soil	MAVMGGDRADADLAVALLGPIEIGSAGGVMTPVAQPRLRVLLGLLGVAGGRMVTAEA
Ga0316363_101953312	3300030659	Peatlands Soil	MPVMGGDRSDGGLVVALLGPVEVGPAGGVMAPIAQPRLRVLLGLLG
Ga0316363_103431341	3300030659	Peatlands Soil	MPVMGGDPAGGVAVALLGSVEVGPAGGVMAPVAQPRLRVLLGLLGVTE
Ga0318516_107702211	3300031543	Soil	MGGDRAGAGLVVALLGPVEIGPAGGTMAPLSQPRLRVLLGLLGVAAGRVVSGHPQQAQQ
Ga0318534_108181902	3300031544	Soil	MPGMGGEAADARVMVGLLGPVEIGPVGGPMAPVAQPRLRVL
Ga0318573_101349603	3300031564	Soil	MGGDYADARLMVGLLGPVEIGPAGGVMAPVPQPRLRVLLGLLGVAAGRVVSAQVLV
Ga0318573_101534211	3300031564	Soil	MPGMRGDAVDARVMVGLLGPVEIGPAGGVMAPVAQPRLRVLLGLLA
Ga0318573_106510842	3300031564	Soil	MPDMGGDAAGARVMVALLGPVEIGPAGGVLAGVAQPRLRVLLGLLAVATGRAV
Ga0318542_106708342	3300031668	Soil	MGGDGFDAPLAVGLLGPVEIGSASGVMVPVAQPRLRVLLGLLGMAGGRMVSAEAL
Ga0318561_107767251	3300031679	Soil	MPVMGADPAGGALMVGLLGPVEVGPVGGPMAPVPQPQQRVLLG
Ga0318496_101148512	3300031713	Soil	MPVMGADLARGALMVGLLGPVEVGPVGGAMAPVPQPQQRVLLGLLGVAGGRMV
Ga0318496_104885291	3300031713	Soil	MPVMGGEDPASGALVVALLGPVEIGLAGGMMADVPQ
Ga0318496_105129812	3300031713	Soil	MPVMSGEDPAGGGLMVGLLGTVEIGYAHGVMTGVPQPKLRVLLGLLAVAAGREVSAE
Ga0318496_107347671	3300031713	Soil	MPGMGWDAADARVMVGLLGPVEIGPAGGVMAPVAQPRLRVLLGLLSVAAGRLVTAEA
Ga0318496_107473311	3300031713	Soil	MPGMRGEAVDARVMVGLLGPIEIGPAGGVLAPVAQPRLRVLLGLLSV
Ga0318493_101560771	3300031723	Soil	MPGMRGEALDARVTVGLLGPVEIGPAGGVLAPVAQPRR
Ga0318493_103020542	3300031723	Soil	MPGMGWDAADARVMVGLLGPVEIGPAGGVMAPVAQPRLRVLL
Ga0318493_104202791	3300031723	Soil	MPVMGGDPADTGLVVGLLGPVEIGPAGGAMAPVVQPQLRVLLGLLGMAGSR
Ga0318493_106755352	3300031723	Soil	MPGMGGDAAGARVMVGLLGPVEIGPAGGVMAPVAQPRLRVLLGLLSVVAGRIVTAE
Ga0306918_105853452	3300031744	Soil	MPGMGWDAADARVMVGLLGPVEIGPAGGVMAPVAQPRLRVLLGLLSVVAGQVVTAEYLVD
Ga0318492_106046411	3300031748	Soil	MPVMGGEDPASGALVVALLGPVEIGLAGGMMADVPQPRLRVL
Ga0318492_106321051	3300031748	Soil	MPVMGGDRADAGLVVALLGPVEIGPAGGTMTPVAQ
Ga0318494_100412373	3300031751	Soil	MGADSAGACLAVALLGPVEAGPAGGVLAGVSQPRLRVLLGLLGVADGRVVTA
Ga0318494_101116631	3300031751	Soil	MPVMSADPAGGALMVGLLGPVEIGPVGGAMAPVPQPQQRVLL
Ga0318494_101186493	3300031751	Soil	MPVMGGERGSAGLVVGLLGPVEIGPAGGTSTPVAQPRLRVLLALLG
Ga0318494_103466512	3300031751	Soil	MGGDYADARLMVGLLGPVEIGPAGGVMAPVPQPRLRVLLGLLGVAAGRVVSAQVL
Ga0318521_103570662	3300031770	Soil	MPLMGEVPAGGGLAVGLLGPVEIGPAGGVMAPVPPPRLRVLLG
Ga0318552_102362322	3300031782	Soil	MPVMGGEDPASGALVVALLGPVEIGLAGGMMADVPQPRLRVLLGLLGVAADRVVSAEA
Ga0318568_103396561	3300031819	Soil	MGADAAGAGLVVALLGPVEIGRPGGATTPVPQPRLRVLLGLLGMA
Ga0318568_108055191	3300031819	Soil	MGGDGADAPLAVGLLGPVEIGSASGVMVPVAQPRLRVLLGLLGMAGGRMVS
Ga0318567_106390211	3300031821	Soil	MPGMGGEAADARVMVGLLGPVEIGPVGGPMAPVAQPRLRVLLGLLGVAAGRVVTAE
Ga0318564_104330082	3300031831	Soil	MGGDRAGAGLVVALLGPVEIGPAGGTMAPLSQPRLRVL
Ga0318511_106324321	3300031845	Soil	MPGMGGEAADARVMVGLLGPVEIGPVGGPMAPVAQPRLRVLLG
Ga0306923_102851671	3300031910	Soil	MGGEPADGGVVVALLGPVEIGPAGGVMAGVAQPRLRCV
Ga0310909_107707533	3300031947	Soil	MPVMGGGRDGTGVVVALLGPVEIGRAGGGLAGVSQ
Ga0306926_125790051	3300031954	Soil	MPVMGGDAADARVVVALLGPVEIGRAGGPMAGVPQRRLRVLLGLLGVAGGRVV
Ga0306922_121962572	3300032001	Soil	MPGMGGDAAGARVMVGLLGPVEIGPAGGMMAAVAQPRLRVLLGLLSVVAGRIVTA
Ga0318562_105481092	3300032008	Soil	MPGMRGEALDARVTVGLLGPVEIGPAGGVLAPVAQPRLRVLLGLLSVAAGRLVTAESLVD
Ga0318563_102354161	3300032009	Soil	MPVMGGDRADAGLVVALLGPVEIGCAGGAMTPVAQPRLRVLLG
Ga0318504_102337251	3300032063	Soil	MPVMSGEDPAGGGLMVGLLGTVEIGYAHGVMTGVPQPKLRVLLGLLAVAAGREVSAEALV
Ga0318513_101806572	3300032065	Soil	MGGDGADAPLAVGLLGPVEIGSASGVMVPVAQPRLRVLLGLLGMAGGRMVSAEAL
Ga0318524_101286621	3300032067	Soil	MPVMGGERGSAGLVVGLLGPVEIGPAGGTSTPVAQPRLRVLLALLGVAAGRVVGGHPQE
Ga0318553_100940881	3300032068	Soil	MPVMGGERGSAGLVVGLLGPVEIGPAGGTSTPVAQPRLRVLLALLGVAAGRVVGAEALV
Ga0318553_102312402	3300032068	Soil	MGGEPADGGVVVALLGPVEIGPAGGVMAGVAQPRLRVLLGLLGVASG
Ga0318553_102759032	3300032068	Soil	MGGDRAGAGLVVALLGPVEIGPAGGTMAPLSQPRLRVLLGLLGVAGAI
Ga0318525_100718941	3300032089	Soil	MPVMGGGRGDTGVVVALLGPVEIGPAGGVMAGVAQPRLRCV
Ga0318525_103919131	3300032089	Soil	MGGDYADARLMVGLLGPVEIGPAGGVMAPVPQPRLRVLLG
Ga0311301_122526792	3300032160	Peatlands Soil	MGGDRADAGLVVALLGLVEVGPAGGVMTPVAQPRLRVLLGLLGVAGGRVVTGEAL
Ga0307471_1027876681	3300032180	Hardwood Forest Soil	MPGMGGDAADARVMVGLLGPVEIGPAGGVMASVAQPG
Ga0307472_1018245522	3300032205	Hardwood Forest Soil	MPGMGRDAVDARVMVGLLGPVEIGLSGGPTAPVAQPRLRVLLGLLAVA
Ga0306920_1013866911	3300032261	Soil	MTWQGRSGRFTMPVVDGVPADARLLVALLGPVEIGPAGGLMAGVAQPQLRVLLSLLAVAGGRVV
Ga0318519_105653073	3300033290	Soil	MPVMGGERGSAGLVVGLLGPVEIGPAGGTSTPVAQPR
Ga0318519_107207682	3300033290	Soil	MPGMGGEAADARVMVGLLGPVEVGQASGPMAPVAQPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067526

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences