Metagenome Family F067507

Basic Information
Family ID	F067507
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	51 residues
Representative Sequence	RAGIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRELEQSGFFNSLYRAK
Number of Associated Samples	112
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.80 %
% of genes near scaffold ends (potentially truncated)	96.00 %
% of genes from short scaffolds (< 2000 bps)	90.40 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (81.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (8.800 % of family members)
Environment Ontology (ENVO)	Unclassified (29.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (32.800 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.63% β-sheet: 0.00% Coil/Unstructured: 47.37%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF09084	NMT1	23.20
PF00701	DHDPS	6.40
PF04389	Peptidase_M28	5.60
PF00903	Glyoxalase	3.20
PF09957	VapB_antitoxin	1.60
PF04255	DUF433	1.60
PF00156	Pribosyltran	1.60
PF12697	Abhydrolase_6	0.80
PF13384	HTH_23	0.80
PF01425	Amidase	0.80
PF14706	Tnp_DNA_bind	0.80
PF13683	rve_3	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	23.20
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	23.20
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	12.80
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	1.60
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.60 %
Unclassified	root	N/A	18.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.60 %
Unclassified	root	N/A	18.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.60 %
Unclassified	root	N/A	18.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.40 %
Unclassified	root	N/A	18.40 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	7.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	48.00 %
Unclassified	root	N/A	18.40 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.20 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.80 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	48.00 %
Unclassified	root	N/A	18.40 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.20 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	2.40 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	48.00 %
Unclassified	root	N/A	18.40 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.20 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2.40 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	48.00 %
Unclassified	root	N/A	18.40 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.20 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	2.40 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	48.00 %
Unclassified	root	N/A	18.40 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.20 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	2.40 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	48.00 %
Unclassified	root	N/A	18.40 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.20 %
Bacillus subtilis group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group	2.40 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	48.00 %
Unclassified	root	N/A	18.40 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.20 %
Bacillus subtilis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus subtilis	2.40 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16481319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus subtilis	1062	Open in IMG/M
2170459015\|G14TP7Y01DF4HZ	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2054453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101345144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	940	Open in IMG/M
3300000559\|F14TC_104133651	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10108906	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	582	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1037965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300000955\|JGI1027J12803_102316869	Not Available	1083	Open in IMG/M
3300000956\|JGI10216J12902_119276413	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300003324\|soilH2_10370923	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300003890\|Ga0063162_1196808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	825	Open in IMG/M
3300004281\|Ga0066397_10094098	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300004780\|Ga0062378_10102127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	709	Open in IMG/M
3300005294\|Ga0065705_10513173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	768	Open in IMG/M
3300005294\|Ga0065705_10851242	Not Available	553	Open in IMG/M
3300005295\|Ga0065707_11014522	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005332\|Ga0066388_104097480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300005471\|Ga0070698_100709390	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005552\|Ga0066701_10031001	All Organisms → cellular organisms → Bacteria	2780	Open in IMG/M
3300005558\|Ga0066698_10136032	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300005564\|Ga0070664_100242125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1619	Open in IMG/M
3300005617\|Ga0068859_101580661	Not Available	724	Open in IMG/M
3300005618\|Ga0068864_100808242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	922	Open in IMG/M
3300005764\|Ga0066903_105568561	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	663	Open in IMG/M
3300005890\|Ga0075285_1004972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1396	Open in IMG/M
3300006806\|Ga0079220_11294277	Not Available	610	Open in IMG/M
3300006846\|Ga0075430_100599069	Not Available	909	Open in IMG/M
3300006853\|Ga0075420_100604124	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300006871\|Ga0075434_100732255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus subtilis	1006	Open in IMG/M
3300006894\|Ga0079215_10088528	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300006904\|Ga0075424_101857946	Not Available	637	Open in IMG/M
3300006918\|Ga0079216_10160070	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300006969\|Ga0075419_10560527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300006969\|Ga0075419_10644684	Not Available	747	Open in IMG/M
3300006969\|Ga0075419_10694701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300009012\|Ga0066710_102713338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300009087\|Ga0105107_10555584	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	800	Open in IMG/M
3300009088\|Ga0099830_10360962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1170	Open in IMG/M
3300009137\|Ga0066709_103949140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300009147\|Ga0114129_10243653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2416	Open in IMG/M
3300009147\|Ga0114129_11556434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	811	Open in IMG/M
3300009156\|Ga0111538_10737710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1247	Open in IMG/M
3300009157\|Ga0105092_10742974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300009167\|Ga0113563_10494584	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1331	Open in IMG/M
3300010046\|Ga0126384_10967820	Not Available	773	Open in IMG/M
3300010046\|Ga0126384_12338310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300010047\|Ga0126382_10684044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	858	Open in IMG/M
3300010360\|Ga0126372_10111507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2087	Open in IMG/M
3300010361\|Ga0126378_12125506	Not Available	640	Open in IMG/M
3300010366\|Ga0126379_11461834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300010376\|Ga0126381_103151047	Not Available	653	Open in IMG/M
3300010399\|Ga0134127_11245121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	812	Open in IMG/M
3300011437\|Ga0137429_1160867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300011440\|Ga0137433_1187401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	675	Open in IMG/M
3300012157\|Ga0137353_1044893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	794	Open in IMG/M
3300012179\|Ga0137334_1145012	Not Available	537	Open in IMG/M
3300012209\|Ga0137379_11313473	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012210\|Ga0137378_10765438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	877	Open in IMG/M
3300012349\|Ga0137387_10741338	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300012353\|Ga0137367_10506893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	850	Open in IMG/M
3300012494\|Ga0157341_1039675	Not Available	541	Open in IMG/M
3300012908\|Ga0157286_10307761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300012924\|Ga0137413_10544612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	860	Open in IMG/M
3300012948\|Ga0126375_10854404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300012948\|Ga0126375_11826414	Not Available	531	Open in IMG/M
3300012948\|Ga0126375_12065825	Not Available	505	Open in IMG/M
3300012961\|Ga0164302_10714533	Not Available	744	Open in IMG/M
3300013297\|Ga0157378_13174279	Not Available	510	Open in IMG/M
3300013306\|Ga0163162_11294147	Not Available	828	Open in IMG/M
3300014326\|Ga0157380_11718782	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300014872\|Ga0180087_1099246	Not Available	558	Open in IMG/M
3300014881\|Ga0180094_1025018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1185	Open in IMG/M
3300014884\|Ga0180104_1154449	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300015259\|Ga0180085_1073807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	990	Open in IMG/M
3300015262\|Ga0182007_10085536	Not Available	1036	Open in IMG/M
3300015371\|Ga0132258_11912910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1493	Open in IMG/M
3300015372\|Ga0132256_100698447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1130	Open in IMG/M
3300015373\|Ga0132257_101433825	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	880	Open in IMG/M
3300015374\|Ga0132255_102062534	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300015374\|Ga0132255_104095246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300015374\|Ga0132255_104095253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300017792\|Ga0163161_11812361	Not Available	543	Open in IMG/M
3300017966\|Ga0187776_10413632	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	905	Open in IMG/M
3300018028\|Ga0184608_10025527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2185	Open in IMG/M
3300018031\|Ga0184634_10034508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2021	Open in IMG/M
3300018031\|Ga0184634_10508746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300018061\|Ga0184619_10019468	All Organisms → cellular organisms → Bacteria	2778	Open in IMG/M
3300018074\|Ga0184640_10011939	All Organisms → cellular organisms → Bacteria	3146	Open in IMG/M
3300018077\|Ga0184633_10178145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1101	Open in IMG/M
3300018079\|Ga0184627_10202011	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300018082\|Ga0184639_10034437	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300018082\|Ga0184639_10404247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300018433\|Ga0066667_10941471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	744	Open in IMG/M
3300018469\|Ga0190270_12673686	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	562	Open in IMG/M
3300019883\|Ga0193725_1145601	Not Available	515	Open in IMG/M
3300021073\|Ga0210378_10128741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	981	Open in IMG/M
3300021081\|Ga0210379_10098105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1217	Open in IMG/M
3300022756\|Ga0222622_11405100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300025930\|Ga0207701_10080515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2946	Open in IMG/M
3300026014\|Ga0208776_1000256	All Organisms → cellular organisms → Bacteria → Proteobacteria	4148	Open in IMG/M
3300026020\|Ga0208531_1004548	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1201	Open in IMG/M
3300026298\|Ga0209236_1272804	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300026324\|Ga0209470_1204416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	832	Open in IMG/M
3300026325\|Ga0209152_10404701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300026536\|Ga0209058_1073126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1829	Open in IMG/M
3300027277\|Ga0209846_1004080	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300027379\|Ga0209842_1026096	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300027379\|Ga0209842_1065052	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300027533\|Ga0208185_1125102	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300027815\|Ga0209726_10172886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1172	Open in IMG/M
3300027840\|Ga0209683_10009766	All Organisms → cellular organisms → Bacteria	3801	Open in IMG/M
3300027840\|Ga0209683_10259924	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300027875\|Ga0209283_10956961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300027909\|Ga0209382_10703035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1087	Open in IMG/M
3300028802\|Ga0307503_10204974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
3300031226\|Ga0307497_10754534	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	507	Open in IMG/M
3300031913\|Ga0310891_10311732	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	557	Open in IMG/M
3300032000\|Ga0310903_10529821	Not Available	619	Open in IMG/M
3300032174\|Ga0307470_10580391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus subtilis	834	Open in IMG/M
3300032261\|Ga0306920_101641370	Not Available	913	Open in IMG/M
3300032955\|Ga0335076_11149064	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	660	Open in IMG/M
3300033407\|Ga0214472_10372112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1347	Open in IMG/M
3300033412\|Ga0310810_10551163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1126	Open in IMG/M
3300033480\|Ga0316620_12279839	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	538	Open in IMG/M
3300033481\|Ga0316600_10945402	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.40%
Host-Associated	Host-Associated	20.80%
Engineered	Engineered	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.20%
Aquatic	Environmental → Aquatic	23.20%
Plants	Host-Associated → Plants	20.80%
Solid Waste	Engineered → Solid Waste	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.20%
Sediment	Environmental → Aquatic → Sediment	15.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.00%
Freshwater	Environmental → Aquatic → Freshwater	7.20%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.80%
Grass	Engineered → Solid Waste → Grass	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.60%
Loam	Environmental → Terrestrial → Soil → Loam	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.20%
Sand	Environmental → Terrestrial → Soil → Sand	2.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.80%
Composting	Engineered → Solid Waste → Grass → Composting	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.40%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.60%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.80%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.80%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.80%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.00%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.20%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.40%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.40%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.80%
Hot Spring Sediments	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003890	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300026020	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067507

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03775100	2088090014	Soil	IKAFLDKNEPAVRSLSIDDQIDNQWVRELEQSGFFNSLYYAK
4PV_01401020	2170459015	Switchgrass, Maize And Mischanthus Litter	YMPNIPYPSRAGIAVIKAFLDKNEPAVRSLSIDNQIDNQIIRELEQSGFFANLQRAK
ICChiseqgaiiDRAFT_20544532	3300000033	Soil	NEPAVRPLSIDDQVDNQFVRELEQSGFFTALQRAK*
INPhiseqgaiiFebDRAFT_1013451442	3300000364	Soil	AGIAAIKAFLDKNEPAVRPLSIDDQIDNQIVRELEQNGFFSSLYRIK*
F14TC_1041336511	3300000559	Soil	NYPRYMPNVPYPSRAGIAVIKGFLERTEPALRQLSIDDQLDIQLVRELEQSGFFNSLYHAK*
AF_2010_repII_A001DRAFT_101089062	3300000793	Forest Soil	MPNVPYPTRAGIAVIKSFLEKSEPALRQLSIDDQIDVQLVRELEQSGFFSALHKNK*
AP72_2010_repI_A100DRAFT_10379652	3300000837	Forest Soil	YMPKIPYPSRAGIAVIKAFLDKNEPAVRALSIDDQIDNQFVRELEQSGFFSSLYRAK*
JGI1027J12803_1023168692	3300000955	Soil	IAVIKAFLDKNEPAVRPLSIDDQIDNQIVRELEQNGFFSSLYRIK*
JGI10216J12902_1192764131	3300000956	Soil	QKDYPRYMPKVPYPSRAGIAVIKAFLDKNEPAVRSLAIDDQIDNQIVRELERSGFFSRLYR*
soilH2_103709231	3300003324	Sugarcane Root And Bulk Soil	PAIPYPSRPGIAVIKSSLDKTEPTVRALSIDDQIENRFVREMEESGFLNEISRAK*
Ga0063162_11968082	3300003890	Hot Spring Sediments	PSRAGIAVIKSFLDKNEPAVRRLSIDDQIDDQFVRELEESGFFANLQRGK*
Ga0066397_100940982	3300004281	Tropical Forest Soil	IPYPSRAGIAVIKAFLDKNEPAVRPLAIDDQIDNQIIRELEQSGFFANLQRAK*
Ga0062378_101021272	3300004780	Wetland Sediment	LNYVPRVPYPNRAGIALIKSFLEKSEPQLRPLSVDDQIDSSILRGLEQSGFFKALYPAK*
Ga0065705_105131732	3300005294	Switchgrass Rhizosphere	YPRYMPKIPYPGRAGIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRELEQSGFFNSLYRAK
Ga0065705_108512421	3300005294	Switchgrass Rhizosphere	AGIAVIKSFLDKTEPAVRPLSIDDQIDNQIVRELEQSGFFTYLQRGK*
Ga0065707_110145222	3300005295	Switchgrass Rhizosphere	RAGIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRELEQSGFFNSLYRAK*
Ga0066388_1040974802	3300005332	Tropical Forest Soil	VIKAFLDKNEPAVRPLSIDGQIDNQIVGELEQSGFFSNLHHAK*
Ga0070698_1007093901	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PYPGRAGIAVIKSFLDKNEPAVRPLSIDDQIDNQIVRELEQSGFFSNLQRTK*
Ga0066701_100310011	3300005552	Soil	IEETQKNYPRYMPNVPYPSRAGIAVIKGFLERTEPALRQLAIDDQIDIQAVRELEQSGFFNSLSRAR*
Ga0066698_101360321	3300005558	Soil	LERTEPALRQLAIDDQIDIQAVRELEQSGFFNSLSRAR*
Ga0070664_1002421253	3300005564	Corn Rhizosphere	FLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRSK*
Ga0068859_1015806612	3300005617	Switchgrass Rhizosphere	AGIAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRSK*
Ga0068864_1008082421	3300005618	Switchgrass Rhizosphere	ETQKDYQRYMPKIPYPSRAGIAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRSK*
Ga0066903_1055685611	3300005764	Tropical Forest Soil	VIKSFLEKSEPALRQLSIDDQIDVQLVRELEQSGFFSALYKNK*
Ga0075285_10049721	3300005890	Rice Paddy Soil	KAFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFFTALQRAK*
Ga0079220_112942771	3300006806	Agricultural Soil	IAVIKSFLDKNEPAVRPLSIDDQIDNQFVREMEQSGFINNLYRAK*
Ga0075430_1005990691	3300006846	Populus Rhizosphere	PSRAGIAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRAK*
Ga0075420_1006041242	3300006853	Populus Rhizosphere	VEETQKNYPRYMPAVPYPSRAGIVVIKSFLDKTEPAVRPLSIDDQIDNQIVRDLEQSGFFGALRGK*
Ga0075434_1007322551	3300006871	Populus Rhizosphere	EPAVRSLSIDDQIDNQWVRELEQSGFFNSLYYAK*
Ga0079215_100885284	3300006894	Agricultural Soil	YPRYMPAVPYPSRAGIAVIKSFLDKTEPAVRPLSIDDQIDNHMVRELEQSGFFNNLPRLK
Ga0075424_1018579462	3300006904	Populus Rhizosphere	DETQKNYPRYMPTVPYPSRAGIAVIKEFMERTDPALRQLSLDDQIDTQWVRELEQSGFFNALYSAK*
Ga0079216_101600701	3300006918	Agricultural Soil	MPDIPYPSRAGVAVIKSFLEKTEPGLQKLSLDEQMDMTIVRELEQSGFFSALQRAK*
Ga0075419_105605271	3300006969	Populus Rhizosphere	GIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRELEQSGFFNTLYHAK*
Ga0075419_106446842	3300006969	Populus Rhizosphere	PSRAGIAVIKSFLDKTDAAVRPLSIDDQIDNQIVRELEQSGFINGAYRSK*
Ga0075419_106947011	3300006969	Populus Rhizosphere	GIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRELEQSGFFNSLYHAK*
Ga0066710_1027133381	3300009012	Grasslands Soil	RAGIAVIKGFLERTEPALRQLAIDDQIDIQAVRELEQSGFFSSLQRAK
Ga0105107_105555842	3300009087	Freshwater Sediment	LFCASDASRPGIAVIKAFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFFTALQRAK*
Ga0099830_103609624	3300009088	Vadose Zone Soil	RYMPNVPYPTRTGIAVIKAFLERTEPALRQLSIDDQIDTSIVRALEQSGFFKELYRDK*
Ga0066709_1039491401	3300009137	Grasslands Soil	GFLERTEPALRQLAIDDQIDIQAVRELEQSGFFNSLSRAR*
Ga0114129_102436531	3300009147	Populus Rhizosphere	PYPSRAGIAVIKAFLDKNEPSVRPLSVDDQIDPQFVRELEQSGFFTALERAR*
Ga0114129_115564341	3300009147	Populus Rhizosphere	NEPAVRSLSIDDQIDNQIVRELEQSGFFNSLYHAK*
Ga0111538_107377101	3300009156	Populus Rhizosphere	DETQKDYQRYMPKIPYPSRAGIAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRAK*
Ga0105092_107429741	3300009157	Freshwater Sediment	QKDYPRYMPKIPYPGRAGIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRELEQSGFFNNLYRAR*
Ga0113563_104945842	3300009167	Freshwater Wetlands	RTYLNYVPRVPYPTRTGIALIKAFLEKSEPQLKPLSVDDQIDNSFVRGLEQSGFFASLYPAK*
Ga0126384_109678203	3300010046	Tropical Forest Soil	LDKNEPAVRALSIDDQIDNQFVRELEQSGFFSSLHRAK*
Ga0126384_123383102	3300010046	Tropical Forest Soil	IAVIKAFLDKNEPAVRALSIDDQIDNQFVRELEQSGFFSSLHRAK*
Ga0126382_106840442	3300010047	Tropical Forest Soil	PNLPYPTRPGIAVIKSFLERNEPALRQLSIDGQLDIQLIRELEQSGFFSRLYAK*
Ga0126372_101115071	3300010360	Tropical Forest Soil	VFLDKNEPAVRALSIDDQIDNQFVRELEQSGFFSSLYRAK*
Ga0126378_121255062	3300010361	Tropical Forest Soil	EPAVRALSIDDQIDNQFVRELEQSGFFSSLHRAK*
Ga0126379_114618343	3300010366	Tropical Forest Soil	YPSRAGIAVIKAFLDKNEPAVRALSIDDQIDNQFVRELEQSGFFSSLHRAK*
Ga0126381_1031510471	3300010376	Tropical Forest Soil	IKAFLDKNEPAVRALSIDDQIDNQFVRELEQSGFFSSLYRAK*
Ga0134127_112451211	3300010399	Terrestrial Soil	PRYMPMVPYPSRAGIAVIKSFLDKNEPAVRPLSIDDQIDNQIVRELEQSGFINNAYHSK*
Ga0137429_11608671	3300011437	Soil	PNRAGIALIKTFLEKSEPQLRPLSVDDQIDGSIVRALEQSGFFSSLYSTR*
Ga0137433_11874012	3300011440	Soil	YMPTVPYPTRAGIAVIKAFLERTEPALRQLSIDDQIDIQLVRELEQEGFFSRLYAK*
Ga0137353_10448931	3300012157	Soil	PRYMPNIPYPSRAGIAVIKAFMEKSDPALRQLSVDDQIDMQFVRELEQSGFFSSPYRAR*
Ga0137334_11450121	3300012179	Soil	NRAGIALIKTFLEKSEPQLRPLSVDDQIDGSIVRALEQSGFYSSLYSTR*
Ga0137379_113134731	3300012209	Vadose Zone Soil	MPNVPYPSRAGIAVIKGFLERTEPALRQLAIDDQIDIQAVRELEQSGFFNSLSRAR*
Ga0137378_107654381	3300012210	Vadose Zone Soil	IPYPSRAGIAVIKAFLDKNEPAVRPLSIDGQIDNQIVRELEQSGFFNSLYRAK*
Ga0137387_107413381	3300012349	Vadose Zone Soil	RTEPALRQLAIDDQIDIQAVRELEQSGFFNSLSRAR*
Ga0137367_105068932	3300012353	Vadose Zone Soil	YPRYMPKVPYPSRAGIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRELEQSGFFNSLYHAK
Ga0157341_10396752	3300012494	Arabidopsis Rhizosphere	GIAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRSK*
Ga0157286_103077612	3300012908	Soil	KDYQRYMPKVPYPSRAGIAVIKSFLDKNEPGVRPLSIDDQIDNQFVRELEQSGFINNLYRSK*
Ga0137413_105446121	3300012924	Vadose Zone Soil	KNYPRYMPMIPYPSRAGIAVIKSFLDKTDAAVRPLSIDDQIDNQIVRELEQGGFINSAYRAK*
Ga0126375_108544042	3300012948	Tropical Forest Soil	TQKNYPRYMPNVPYPTRSGIAVIKSFLERNEPALRQLAIDDQLDIQLIRELEQSGFFSKLHAR*
Ga0126375_118264141	3300012948	Tropical Forest Soil	NEPAVRPLAVDGQIDNQIVRDLEQSGFIANLERRK*
Ga0126375_120658251	3300012948	Tropical Forest Soil	IAVIKAFLDKNEPAVRALSIDDQIDNQFVRELEQSGFFSSLYRAK*
Ga0164302_107145332	3300012961	Soil	SRAGIAVIKSFLDKTDAAVRPLSIDDQIDNQIVRELEQSGFINGAYRAK*
Ga0157378_131742791	3300013297	Miscanthus Rhizosphere	PSRAGIAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRSK*
Ga0163162_112941471	3300013306	Switchgrass Rhizosphere	PSRAGIAVIKSFLDKTDAAVRPLSIDDQIDNQIVRELEQGGFINSAYRSK*
Ga0157380_117187823	3300014326	Switchgrass Rhizosphere	ETQKDYQRYMPKIPYPSRAGIAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFITNLYRSK*
Ga0180087_10992461	3300014872	Soil	YLNYVPRVPYPNRAGIALIKTFLEKSEPQLRPLSVDDQIDGSIVRGLEQSGFFSSLYSTR
Ga0180094_10250181	3300014881	Soil	QKSYPRYMPNIPYPSRAGIAVIKAFMEKSDPALRQLSVDDQIDMRFVRELEQSGFFSSPYRAR*
Ga0180104_11544491	3300014884	Soil	PSRAGIAVIKAFMEKSDPALRQLSVDDQIDMQFVRELEQSGFFSSPYRAR*
Ga0180085_10738071	3300015259	Soil	QKSYPRYMPNIPYPSRAGIAVIKAFMEKSEPALRQMSVDDQIDMQFVRELEQSGFFSSPYRAR*
Ga0182007_100855361	3300015262	Rhizosphere	IKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRSK*
Ga0132258_119129101	3300015371	Arabidopsis Rhizosphere	PGRAGIAVIKAFLDKNEPAVRTLSIDDQIDNQFVRELEQSGFFSSLYHAK*
Ga0132256_1006984471	3300015372	Arabidopsis Rhizosphere	AGIAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFITNLYRSK*
Ga0132257_1014338251	3300015373	Arabidopsis Rhizosphere	KSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFITNLYRSK*
Ga0132255_1020625341	3300015374	Arabidopsis Rhizosphere	KNEPAVRTLSIDDQIDNQFVRELEQSGFFSSLYR*
Ga0132255_1040952462	3300015374	Arabidopsis Rhizosphere	PRYMPKIPYPGRAGIAVIKAFLDKNEPAVRTLSIDDQIDNQFVRELEQSGFFSSLYHAK*
Ga0132255_1040952532	3300015374	Arabidopsis Rhizosphere	PRYMPKIPYPGRAGIAVIKAFLDKNEPAVRTLSIDDQIDNQWVRELEQSGFFNSLYHAK*
Ga0163161_118123611	3300017792	Switchgrass Rhizosphere	PSRAGIAVIKSFLDKTDAAVRPLSIDDQIDNQIVRDLEQSGFINGAYRSK
Ga0187776_104136321	3300017966	Tropical Peatland	NEPAVRSLSIDDQIDNQFVRELEQSGFINSLYRTK
Ga0184608_100255271	3300018028	Groundwater Sediment	ETQKNYPRYMSNIPYPSRVGIAVIKAFLEKTEAALQKLSIDDQIDVQLVRELEQSGFFSNLQRAK
Ga0184634_100345081	3300018031	Groundwater Sediment	RYMPNIPYPSRVGIAVIKAFLEKTEPALQKLSVDDQIDMQFVRELEQSGFFSGLQRAK
Ga0184634_105087461	3300018031	Groundwater Sediment	RYMPNIPYPSRVGIAVIKAFLEKTEPALQKLSVDDQIDMQLVRELEQSGFFSGLERAK
Ga0184619_100194681	3300018061	Groundwater Sediment	LEKTEPALQKLSIDDQIDVQLVRELEQSGFFSGLQRAK
Ga0184640_100119391	3300018074	Groundwater Sediment	MPNVPYPTRAGIAVIKGFLEKTEPALRQLSIDDQIDMQFVRELEQSGFFSTR
Ga0184633_101781452	3300018077	Groundwater Sediment	GIAVIKAFLEKSEPALRQLSIDDQIDNQWVRELEQGGFFTSPYHAR
Ga0184627_102020114	3300018079	Groundwater Sediment	VPYPGRAGIAVIKSFLDKNEPAVRRLSIDDQIDNQIVRELEQSGFFSNLQRGK
Ga0184639_100344371	3300018082	Groundwater Sediment	RYMPNIPYPSRVGIAVIKAFLEKTEPALQKLSVDDQIDMQLVRELEQSGFFSGLQRAK
Ga0184639_104042472	3300018082	Groundwater Sediment	PRVPYPNRAGIALIKTFLEKSEPQLRPLSVDDQIDGSIVRGLEQSGFFSSLYFTR
Ga0066667_109414712	3300018433	Grasslands Soil	IEETQKNYPRYMPNVPYPSRAGIAVIKGFLERTEPALRQLAIDDQIDIQAVRELEQSGFFNSLSRAR
Ga0190270_126736861	3300018469	Soil	YVPRVPYPTRAGIALIKTFLEKSEPALRPLSVDDQIDGSIVRGLEQSGFFSALYPGR
Ga0193725_11456012	3300019883	Soil	KTDAAVRPLSIDDQIDNQIVRELEQGGFINSAYRSK
Ga0210378_101287412	3300021073	Groundwater Sediment	VEETQKNYPRYMPNIPYPSRVGIAVIKAFLEKTEPALQKLSIDDQIDVQLVRELEQSGFFSNLQRAK
Ga0210379_100981051	3300021081	Groundwater Sediment	PSRAGIAVIKAFMEKSDPALRQLSVDDQIDMQFVRELEQSGFFSSPYRAR
Ga0222622_114051002	3300022756	Groundwater Sediment	MVPYPSRAGIAVIKSFLDKNEPAVRPLSIDDQIDNQIVRELEQSGFINNAYHSK
Ga0207701_100805154	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VPYPSRAGIAVIKSFLDKTDAAVRPLSIDDQIDNQIVRELEQSGFINGAYRSK
Ga0208776_10002565	3300026014	Rice Paddy Soil	YPRYMPNVPYPSRLGIAVIKAFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFFTALQRAK
Ga0208531_10045481	3300026020	Rice Paddy Soil	GIAVIKAFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFFTALQRAK
Ga0209236_12728041	3300026298	Grasslands Soil	FLDKNEPAVRPLSIDGQIDNHIVRELEQSGFFSNVQRAK
Ga0209470_12044162	3300026324	Soil	YPRYMPKVPYPSRAGIAVIKAFLDKNEPAVRPLSIDGQIDNHIVRELEQSGFFSNVQRAK
Ga0209152_104047011	3300026325	Soil	RTEPALRQLAIDDQIDIQAVRELEQSGFFNSRSRAR
Ga0209058_10731263	3300026536	Soil	LERTEPALRQLAIDDQIDIQAVRELEQSGFFNSLSRAR
Ga0209846_10040801	3300027277	Groundwater Sand	PYPGRAGIAVIKAFLDKNEPAVRSLSIDNQIDNEIVRELEQSGFFNSLYQAK
Ga0209842_10260964	3300027379	Groundwater Sand	GRAGIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRELEQGGFFNSLYQAK
Ga0209842_10650522	3300027379	Groundwater Sand	GRAGIAVIKAFLDKNEPAVRSLSIDDQIDNQIVRDLEQGGFFNSLYHSK
Ga0208185_11251021	3300027533	Soil	KNYPRYMPNVPYPSRAGIAVIKAFLERTEPALRQLSIDDQIDIQLVRELEQNGFFNSLYHAK
Ga0209726_101728861	3300027815	Groundwater	DALVQEETQRTYLNYVPRVPYPNRAGIALIKTFLEKSEPQLRPLAVDDQIDSSIVRGLEQSGFFNALYPAK
Ga0209683_100097661	3300027840	Wetland Sediment	YPTRAGIALIKTFLEKNEPQLRPLSVDDQIDGSILRGLEQSGFFAALYPAK
Ga0209683_102599242	3300027840	Wetland Sediment	VPYPNRAGIALIKSFLEKSEPQLRPLSVDDQIDSSILRGLEQSGFFKALYPAK
Ga0209283_109569611	3300027875	Vadose Zone Soil	IAVIKAFLERTEPALRQLSIDDQIDVQLVRELEQSGFFNGLYQRK
Ga0209382_107030351	3300027909	Populus Rhizosphere	VVIKSFVDKTEPSVRPLSIDDQIDNQIVRELEQSGFFGALRGK
Ga0307503_102049741	3300028802	Soil	ETQRTYLNYVPRVPYPNRAGIALIKTFLEKSEPQLRPLSVDDQIDGSIVRGLEQSSFFAGLYPAK
Ga0307497_107545342	3300031226	Soil	YVPRVPYPTRAGIALIKTFLEKSEPQLKPLSVDDQIDNSFVRGLEQSGFFNALYPAK
Ga0310891_103117322	3300031913	Soil	NYVPRVPYPTRAGIALIKTFLEKSEPQLRPLSVDDQIDGSIVRGLEQSGFFSALYPGR
Ga0310903_105298211	3300032000	Soil	IAVIKSFLDKTDAAVRPLSIDDQIDNQIVRELEQGGFINGAYRSK
Ga0307470_105803911	3300032174	Hardwood Forest Soil	LDKNEPAVRSLSIDDQIDNQWVRELEQSGFFNSLYYAK
Ga0306920_1016413701	3300032261	Soil	AVIKAFLDKNEPAVRPLSIDEQIDNQMIRELDQSGFISSVYRSK
Ga0335076_111490642	3300032955	Soil	FMEKSEPALRQLSIDDQIDVQIVRELDQSGFFSALYKNK
Ga0214472_103721121	3300033407	Soil	IAVIKGFLEKTEPALRQLSIDDQIDMQFVRELEQSGFFSSPYRAR
Ga0310810_105511631	3300033412	Soil	IAVIKSFLDKNEPAVRPLSIDDQIDNQFVRELEQSGFINNLYRGK
Ga0316620_122798392	3300033480	Soil	IPYPSRAGIAVIKAFLDKNEPAVRPLSIDDQIDNQTVRELEQNGFFSSLYRTQ
Ga0316600_109454021	3300033481	Soil	KTEPALRKLSIDDQIDNRFVREMEESGFLREVNRTK

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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