Metagenome Family F067494

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067494
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	82 residues
Representative Sequence	MNYFDLYSSYSDRTIAAAWDSQVKEADQTPWLADALTGCGDELFARFAACYADLRALPRSARRALQRQLARSSELAAILPE
Number of Associated Samples	104
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.60 %
% of genes from short scaffolds (< 2000 bps)	94.40 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (12.000 % of family members)
Environment Ontology (ENVO)	Unclassified (20.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.55% β-sheet: 0.00% Coil/Unstructured: 39.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF16261	DUF4915	12.00
PF01075	Glyco_transf_9	8.80
PF05345	He_PIG	7.20
PF04392	ABC_sub_bind	5.60
PF13946	DUF4214	1.60
PF10049	DUF2283	0.80
PF13432	TPR_16	0.80
PF02743	dCache_1	0.80
PF00413	Peptidase_M10	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	8.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.60
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.80
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.60 %
Unclassified	root	N/A	38.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.60 %
Unclassified	root	N/A	38.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.60 %
Unclassified	root	N/A	38.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.20 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.80 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.40 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.40 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.40 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.80 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.40 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.20 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.40 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.40 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.80 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.40 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.20 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.60 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	1.60 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.80 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.80 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.40 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.20 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	1.60 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.80 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.40 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.20 %
Rhodospirillaceae bacterium LM-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium LM-1	1.60 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.60 %
Roseomonas vastitatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas vastitatis	0.80 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.80 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.40 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.20 %
Rhodospirillaceae bacterium LM-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium LM-1	1.60 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.60 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.80 %
Roseomonas vastitatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas vastitatis	0.80 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01ALAON	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
2162886013\|SwBSRL2_contig_7598418	Not Available	811	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100594333	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100703301	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300000787\|JGI11643J11755_11481201	Not Available	1273	Open in IMG/M
3300000890\|JGI11643J12802_10853325	Not Available	500	Open in IMG/M
3300003911\|JGI25405J52794_10079241	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300003987\|Ga0055471_10187312	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300003998\|Ga0055472_10044458	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300004057\|Ga0055496_10207439	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300004157\|Ga0062590_102938300	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300004267\|Ga0066396_10106033	Not Available	525	Open in IMG/M
3300004463\|Ga0063356_100863642	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300004643\|Ga0062591_102265215	Not Available	566	Open in IMG/M
3300005093\|Ga0062594_102486244	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005166\|Ga0066674_10296973	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005293\|Ga0065715_10962540	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005332\|Ga0066388_104519369	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300005332\|Ga0066388_107815930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium LM-1	535	Open in IMG/M
3300005367\|Ga0070667_100552201	Not Available	1059	Open in IMG/M
3300005441\|Ga0070700_100921434	Not Available	713	Open in IMG/M
3300005456\|Ga0070678_100727744	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005459\|Ga0068867_101701614	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005564\|Ga0070664_102215490	Not Available	521	Open in IMG/M
3300005615\|Ga0070702_100483531	Not Available	905	Open in IMG/M
3300005713\|Ga0066905_101339579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	645	Open in IMG/M
3300005841\|Ga0068863_102115808	Not Available	573	Open in IMG/M
3300005889\|Ga0075290_1030743	Not Available	692	Open in IMG/M
3300006845\|Ga0075421_100116728	All Organisms → cellular organisms → Bacteria	3353	Open in IMG/M
3300006847\|Ga0075431_101853781	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300006847\|Ga0075431_102080792	Not Available	522	Open in IMG/M
3300006852\|Ga0075433_10560948	Not Available	1003	Open in IMG/M
3300006854\|Ga0075425_100866362	Not Available	1033	Open in IMG/M
3300006903\|Ga0075426_11046059	Not Available	617	Open in IMG/M
3300006904\|Ga0075424_100999795	Not Available	892	Open in IMG/M
3300006914\|Ga0075436_100264232	Not Available	1228	Open in IMG/M
3300007076\|Ga0075435_100351429	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300009094\|Ga0111539_10423699	Not Available	1550	Open in IMG/M
3300009100\|Ga0075418_13115933	Not Available	505	Open in IMG/M
3300009156\|Ga0111538_10446207	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300009156\|Ga0111538_10568358	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300009156\|Ga0111538_10710424	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300009837\|Ga0105058_1171695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium LM-1	533	Open in IMG/M
3300010046\|Ga0126384_10109053	All Organisms → cellular organisms → Bacteria	2060	Open in IMG/M
3300010046\|Ga0126384_10178562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1661	Open in IMG/M
3300010046\|Ga0126384_11027166	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300010047\|Ga0126382_10148137	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300010047\|Ga0126382_11046939	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300010047\|Ga0126382_11188815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	682	Open in IMG/M
3300010047\|Ga0126382_12404239	Not Available	512	Open in IMG/M
3300010048\|Ga0126373_11387926	Not Available	768	Open in IMG/M
3300010359\|Ga0126376_11429615	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300010360\|Ga0126372_11301167	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300010361\|Ga0126378_12005158	Not Available	659	Open in IMG/M
3300010362\|Ga0126377_11081491	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010366\|Ga0126379_12871130	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010366\|Ga0126379_13573954	Not Available	521	Open in IMG/M
3300010391\|Ga0136847_10020503	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010391\|Ga0136847_10937256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	906	Open in IMG/M
3300010399\|Ga0134127_10035394	All Organisms → cellular organisms → Bacteria	4028	Open in IMG/M
3300010401\|Ga0134121_12493333	Not Available	559	Open in IMG/M
3300010403\|Ga0134123_10129641	Not Available	2055	Open in IMG/M
3300012173\|Ga0137327_1135396	Not Available	541	Open in IMG/M
3300012202\|Ga0137363_10564913	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300012358\|Ga0137368_10132600	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300012506\|Ga0157324_1030382	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300012912\|Ga0157306_10339641	Not Available	566	Open in IMG/M
3300012948\|Ga0126375_11187774	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300012957\|Ga0164303_10548585	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012960\|Ga0164301_11369794	Not Available	577	Open in IMG/M
3300012960\|Ga0164301_11578566	Not Available	544	Open in IMG/M
3300012961\|Ga0164302_10786526	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300012985\|Ga0164308_12058712	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300012986\|Ga0164304_11472810	Not Available	562	Open in IMG/M
3300012989\|Ga0164305_12033090	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300013102\|Ga0157371_11187867	Not Available	587	Open in IMG/M
3300013104\|Ga0157370_11478327	Not Available	611	Open in IMG/M
3300013297\|Ga0157378_10180636	Not Available	1985	Open in IMG/M
3300013306\|Ga0163162_10367542	Not Available	1572	Open in IMG/M
3300014300\|Ga0075321_1034051	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300015373\|Ga0132257_101104901	Not Available	1001	Open in IMG/M
3300015373\|Ga0132257_101649480	Not Available	821	Open in IMG/M
3300015373\|Ga0132257_103384313	Not Available	580	Open in IMG/M
3300015373\|Ga0132257_103560608	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300015374\|Ga0132255_102579408	Not Available	777	Open in IMG/M
3300015374\|Ga0132255_103426747	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300016404\|Ga0182037_10920237	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300018031\|Ga0184634_10086951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1350	Open in IMG/M
3300018052\|Ga0184638_1079386	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300018053\|Ga0184626_10234102	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300018053\|Ga0184626_10274207	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300018056\|Ga0184623_10287326	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300018073\|Ga0184624_10110614	Not Available	1183	Open in IMG/M
3300018074\|Ga0184640_10023016	Not Available	2400	Open in IMG/M
3300018074\|Ga0184640_10306850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	720	Open in IMG/M
3300018077\|Ga0184633_10005992	All Organisms → cellular organisms → Bacteria	5621	Open in IMG/M
3300018077\|Ga0184633_10090150	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300018078\|Ga0184612_10544957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	559	Open in IMG/M
3300018079\|Ga0184627_10453743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	666	Open in IMG/M
3300018082\|Ga0184639_10199434	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300018469\|Ga0190270_11600338	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300019362\|Ga0173479_10816612	Not Available	518	Open in IMG/M
3300021073\|Ga0210378_10159867	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300021073\|Ga0210378_10291633	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300021432\|Ga0210384_11550044	Not Available	568	Open in IMG/M
3300025912\|Ga0207707_10075191	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2947	Open in IMG/M
3300025917\|Ga0207660_11099611	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300025921\|Ga0207652_10963069	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300025933\|Ga0207706_10922203	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300025935\|Ga0207709_10243652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas vastitatis	1309	Open in IMG/M
3300025961\|Ga0207712_10784793	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300025972\|Ga0207668_11372893	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300026023\|Ga0207677_11251846	Not Available	680	Open in IMG/M
3300026032\|Ga0208419_1029638	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300027552\|Ga0209982_1050626	Not Available	670	Open in IMG/M
3300027722\|Ga0209819_10055456	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1362	Open in IMG/M
3300030606\|Ga0299906_11160997	Not Available	558	Open in IMG/M
3300031538\|Ga0310888_10333515	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300031740\|Ga0307468_101919966	Not Available	565	Open in IMG/M
3300031944\|Ga0310884_11003901	Not Available	519	Open in IMG/M
3300032076\|Ga0306924_11483913	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300032205\|Ga0307472_101197824	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300033486\|Ga0316624_11418168	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300034147\|Ga0364925_0029551	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300034148\|Ga0364927_0220135	Not Available	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.80%
Host-Associated	Host-Associated	31.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.20%
Plants	Host-Associated → Plants	31.20%
Aquatic	Environmental → Aquatic	17.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.80%
Sediment	Environmental → Aquatic → Sediment	11.20%
Freshwater	Environmental → Aquatic → Freshwater	4.00%
Marine	Environmental → Aquatic → Marine	2.40%
Floodplain	Environmental → Terrestrial → Floodplain	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.20%
Loam	Environmental → Terrestrial → Soil → Loam	7.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.40%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.40%
Lake	Environmental → Aquatic → Freshwater → Lake	1.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.60%
Sand	Environmental → Terrestrial → Soil → Sand	0.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.40%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.60%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.20%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.60%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.60%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004057	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026032	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_02205250	2067725002	Soil	MNYFDLYPSYSDHSIAAAWDSQVQEADETPWFAEILRSRGTELFPHFAACYAELRALPRATRRALQREAAR
SwBSRL2_0527.00005790	2162886013	Switchgrass Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEAKDTPGLADALTHRGEELFARFVMCYAELKARPRSARRALQRQLARSSELATILPGHFRQSG
INPhiseqgaiiFebDRAFT_1005943331	3300000364	Soil	MDYFTLYSSYPDHTIAAAWDSQVKEADKNPRLADTLIERGDELFSRFAACYAELRALPRGARRALQRRL
INPhiseqgaiiFebDRAFT_1007033012	3300000364	Soil	MNYFDLYSSYPDRTIAAAWDSQVKEADKTPWLAGTLTECEDELFSRFAAFYAELCALPRSARRALQRQIARSSELAAILPEYLQQGGRRLQH
JGI11643J11755_114812011	3300000787	Soil	MNYFDLYSSYPDHSITAAWDCQITRAAQTPWLKELLLRRGSELFPRFASCYAELSALPRSARRALQHQIARSSELAVIFPEWLQSGGRREIQYKLARSLAGA
JGI11643J12802_108533251	3300000890	Soil	MNYFDLYSSYPDHSITAAWDCQITRAAQTPWLKELLLRRGSELFPRFASCYAELSALPRSARRALQHQIARSSEL
JGI25405J52794_100792412	3300003911	Tabebuia Heterophylla Rhizosphere	MNYFDLYSSYPDRTIAAAWDAQVKEAEMTPWLAGTLTERGYDLFARFAACYAELRALPRSARRALQRQLARSSELAAIL
Ga0055471_101873121	3300003987	Natural And Restored Wetlands	MNYFDLYSSYPDHTIAAAWDSQVKEADNIPWLTDTLTECGDELFARFASCYAELCALPRSARRALQRRLARSTELAAILPEYLQHGGRR
Ga0055472_100444582	3300003998	Natural And Restored Wetlands	MKYFDLYASYPDYTIAAAWESQIKEADRSPWFADTLTESGDELFARFAACYAELRALPRSARRALQRRIARSGELGA
Ga0055496_102074391	3300004057	Natural And Restored Wetlands	MKYFELYPSYPDHTIAAAWESQVKKAATTPWLADTLRQCGDGLLACSAVRYTELRALPRSARRALQRQLGRSSELAAILPEYLQQ
Ga0062590_1029383001	3300004157	Soil	MKYFDLYGSYPYHTIAAAWDSRSKEADWESLLAETLTAGESELQARFGACYAELRALPRSARRALQRRIARS
Ga0066396_101060331	3300004267	Tropical Forest Soil	MNYLNLSSSYPDPTIAAAWDSQAKEADKTPWLADTLTERGGELFARFATCYAELRALPRGVRRALQRQLARSSG
Ga0063356_1008636421	3300004463	Arabidopsis Thaliana Rhizosphere	MNYLDLYSSYLDRTIAEAWDSQIKEASKAPWISETLNRRGNELFQRFAVCYVELRALPRGARRSVQRRLARSSELAAILPKYFKQGG
Ga0062591_1022652152	3300004643	Soil	MNYFDLYSSYPDHSITAAWDCQITRAAQTPWLKELLLRRGSELFPRFASCYAELSALPRSARRALQHQIARSSELAVIFPEWLQSGGRREFQYKLAHSLAG
Ga0062594_1024862441	3300005093	Soil	MNYFDLYSSYPDSTIAAAWNSQVKEADKTLCLAEELATRESELFARFAACYSELCALPRSARRALQRRIARSSEL
Ga0066674_102969731	3300005166	Soil	MNYLDLYSSYPDRTIVAAWDSQLEETRHGPWFKELLLRSGSELFPRFAVCYAELRALPRNARRTLQRQIACSRELAAIFPE
Ga0065715_109625401	3300005293	Miscanthus Rhizosphere	MNYLDLYSSFPDRTITSAWDAQLRYGRKNPWLNEALRRYGDELFARFAACYTELRALPRGARRRLQRRLARSTDFGAAL
Ga0066388_1045193691	3300005332	Tropical Forest Soil	MNYLNLSSSYPDATIASAWDSQVKQANNTPWLDDTLTECGDELFARFAACYAELRALPRGVRRALQRQLARSSGLAAILPEYLQHGGRRLQ
Ga0066388_1078159301	3300005332	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEADNNPWLACTLTECGGELFARFAACYAELRALPRSARRALQ
Ga0070667_1005522011	3300005367	Switchgrass Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVTCYAELKARPRSARRALQRQLARSSELATILPGYFHENGRRLQHKMAWSLA
Ga0070700_1009214342	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLSAALKQYGDELFARFAAGYADLRALPRGARRSLQRRIARSGKLAAIL
Ga0070678_1007277442	3300005456	Miscanthus Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLRYGRKNPWLNEALRRYGDELFARFAACYTELRALPRGARRALQRRLARSSELGAILPK
Ga0068867_1017016142	3300005459	Miscanthus Rhizosphere	MNYLDLYSSFPDRTITSAWDAQLRYGRKNPWLNEALRRYGDELFARFAACYTELRALPRGARRRLQRRLARSTDFGAALPEC
Ga0070664_1022154902	3300005564	Corn Rhizosphere	MNYFDLYSSYPDETITAAWDSQVREADDVPWFAALLRGRGAELFPRFAVCYAELRALPRATRRALQRDAA
Ga0070702_1004835311	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVTCYAELKARPRSARRALQRQLARSSELATILPG
Ga0066905_1013395791	3300005713	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWESQVKQADNTWLAGTLSECGDDLFARFAACYAELRALPRSARRALQRQLARSS
Ga0068863_1021158082	3300005841	Switchgrass Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEVDKTSWLAEKLATRESELFARFAACYADLRALPRSARRALQRRIARSSELAAIFPEYLQHRGRRLQHRMAW
Ga0075290_10307431	3300005889	Rice Paddy Soil	MNYLDLYSSYPDHTITVAWDCQITEAAQVRWLKELLLRGGSELFPRFAVCYAELRVLPRSARRALQRQIARSSELA
Ga0075421_1001167286	3300006845	Populus Rhizosphere	MNYFDLYSSYPDRTIAAAWDSQLKKADNTPWLAGTLTECGDELFVRFAACYAELRALPRSARRSLQRRIARSSELAAIL
Ga0075431_1018537811	3300006847	Populus Rhizosphere	MNYFDLYSSYPDSTIAAAWNSQLKEVDKTSWLAEKLATRESELFARFAACYADLRALPRSARRALQRRIARSSELAAILPEY
Ga0075431_1020807921	3300006847	Populus Rhizosphere	MNYFDLYSSYPDPTIAAAWDSQVKEADKTPCLADTLTACGGELFARFAACYAELRALPRSARRTLQRRIARSSELAAILPECLQQGGKRLQHRMAWS
Ga0075433_105609483	3300006852	Populus Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVTCYAELKARPRSARRALQR
Ga0075425_1008663621	3300006854	Populus Rhizosphere	MNYLGLYSSYPDRTIAGVWESQVKEADNTPGLADALTRCGEELFARFVTCYAELKARPRSARRALQRQ
Ga0075426_110460592	3300006903	Populus Rhizosphere	MNYFDLYSSYPDPTIAAAWDSQVKEADKTPCLADTLTACGGELFARFAACYAELRALPRSARRTLQRRIARSSEL
Ga0075424_1009997951	3300006904	Populus Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEADNTLWLADTLTECGYELSARFAACYAELRAMPRSARRALQRRIARSSELAAILPGYLQHRGRRLQHRMAW
Ga0075436_1002642321	3300006914	Populus Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVTCYAELKARPRSARRALQRQLARSSELATILPGYFHQNGRRLQHKMAWSLAG
Ga0075435_1003514291	3300007076	Populus Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLNYGSKNPWLNEALRRYGDELFARFAACYAELRALPRGARRRLQRRLARSTDFGAALP
Ga0111539_104236992	3300009094	Populus Rhizosphere	MNYLDLYSYPDHTIAAAWDSQVKEADKNPWLSEALKQYGDELFARFAACYADLRALPRGARRTLQRRIARSGKLAAIFPEYLQQGGRRLQHKMAWSLAG
Ga0075418_131159331	3300009100	Populus Rhizosphere	MNYFDLYSSYPDRTIAAAWDSQIKEADNTPWLAGALTECGDELFERFAACYAELRALPRSARRALQRRLARSTELAAILPEYLQQGGRRLQHRM
Ga0111538_104462072	3300009156	Populus Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNQALMRYGDELFARFAACYTELRALPRAARRRLQHRLARSTDFGAALPECLRQSG
Ga0111538_105683582	3300009156	Populus Rhizosphere	MNYFDLHSSFPDSTIAAAWNSQVKEADKTLCLAEELATRESELFARFAACYSELRVLPRSARRALQRRIARS
Ga0111538_107104242	3300009156	Populus Rhizosphere	MNYLDLYSSFPDRTITSAWDAQLRYGRKNPWLNEALRRYGDELFARFAACYADLHALPRGARRTLQRRIARSNEIGAILP
Ga0105058_11716952	3300009837	Groundwater Sand	MNYFDLYSSYPDRTIAAAWDSQVKEADEAPWFADTLNECGGELFARFAACYAELRALPRSARRTLQRQLARSSELAAILPEYLQQGG
Ga0126384_101090535	3300010046	Tropical Forest Soil	MNYFDLYSSYSDRTIAAAWDSQVKEADQTPWLADALTGCGDELFARFSACYAELRALPRSARRALQRRVARSSDLAAILPEYLQ*
Ga0126384_101785622	3300010046	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEADNTWLAGTLTECRGELFARFAACYAELRALPRSARRALQRQLARSSDLAVILPEYFQQGGRRL*
Ga0126384_110271661	3300010046	Tropical Forest Soil	MNYFTLYSSYPDHTIAAAWDSQVEEADNTWLANTLTEHGGELFARFAARYAELRALPRSARRTLQRQLARSSDLAAI
Ga0126382_101481371	3300010047	Tropical Forest Soil	MNYFDLYSSYSDRTIAAAWDSQVKEADQTPWLADALTGCGDELFARFAACYADLRALPRSARRALQRQLARSSELAAILPE
Ga0126382_110469392	3300010047	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEANNTWLAGTLTECRGELFARFAACYAELRALPRSARRALQRQLARSSELA
Ga0126382_111888152	3300010047	Tropical Forest Soil	MNYLDLYSSYPDRVIAGSWDSHFKELEKFPWLADTLAESGGDLFSRFAACYAELSALPRGARRALQRRLARSSEIAAILPE
Ga0126382_124042391	3300010047	Tropical Forest Soil	MNYFDLCLSYPDRTIAAAWDSQVKEADKTPLLADALTESGDELFTRFAAGYAELRALPRSARRALQRQLARSAELATILPDYLQQGGRRL
Ga0126373_113879261	3300010048	Tropical Forest Soil	MDYFTLYSSYPDHTIASAWDSQVKEADQSPWLANTLTGCGEELFARFAARYAELRALPRSARRALQRQLARSSGPAAILPEYLQHGGRRLQHRMAW
Ga0126376_114296152	3300010359	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEVDTTPWLADTLTECGGELFARFAACYGELRALPRSARRTLQRQLACSTELAAILPEYLQQGGRRLQHR
Ga0126372_113011671	3300010360	Tropical Forest Soil	MNYLNLSSSYPDPTIAAAWDSQAKEADKTPWLADTLTERGGELFARFATCYAELRALPRGVRRALQRQLARSSGLAAILPEYLQQGGRR
Ga0126378_120051581	3300010361	Tropical Forest Soil	MNYFDLYSSYPDHTIASAWDSQVKEAEKTPWLGDALTDCGEELFGRFAECYAELRALPRSARRSLQRRLACSGELAAILPEKFLRGGRRL
Ga0126377_110814912	3300010362	Tropical Forest Soil	MNYFDLNLLYGDRTIASAWDSQVKEADTTSWLTDTLKERGDELLSRVTACYAELRAMPRSARRTLQRHLARSSEIAAILPEYLQRGG
Ga0126379_128711301	3300010366	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEVDTTPWLADTLTECGGELFARFAVCYGELRALPRSARRTLQRQLACSTELAAILPEYLQQGGRRLQHRM
Ga0126379_135739541	3300010366	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWESQVKEADNTWLAGTLSECGDDLFARFAACYAELRALPRSARRGLQRQLARSSEL
Ga0136847_100205031	3300010391	Freshwater Sediment	MNYFDLYSSYPDRPIAGAWDSQVKEADNAPWLADLLPLHGSEIFLRFVACYAELRALPRGARRAHQRRLARSSEVAAILPEYLQQGGRR
Ga0136847_109372561	3300010391	Freshwater Sediment	MNYFDLYSSYPDRTIAAAWDSQVKEADACPWLVDSLTECGGELFLRFAACYAELRALPRGARRALQRRLARSSELAAILPEYLQQG*
Ga0134127_100353945	3300010399	Terrestrial Soil	MNYLDLYSSYPDRTIAGVWESQVKEAKDTPGLADALTHRGEELFARFVMCYAELKARPRSARRALQR
Ga0134121_124933332	3300010401	Terrestrial Soil	MNYLDLYSSYPDRTITSAWDTQLKYESKNPWLNEALRRCGDELFARFAACYADLRALPRGKRRRLQRRLARSTDFGAALPECL
Ga0134123_101296411	3300010403	Terrestrial Soil	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLSDALKQYSDDLFARFAACYADLRALPRGARRSLQRRIARSGKLA
Ga0137327_11353961	3300012173	Soil	MKYFDLYASYPDYTIAAAWDSQCKEADKARWLADTLAECESEVFARFAECYAELRALPRSARRALQRRLARSSELAVILPEHVRQG
Ga0137363_105649131	3300012202	Vadose Zone Soil	MNYFNLYSSYPDHTIAAAWDSQVKEADKPSWLADTLTECGDELFARFAACYTELSALPRSARRALQRRIARSGELAAILPEYL
Ga0137368_101326001	3300012358	Vadose Zone Soil	MNYLDLYSSYPDRTITAAWDSQVKEADRISWFADILTERSGELFSRFATCYAELRALPRGARRSLQRRLARSSALAAV
Ga0157324_10303822	3300012506	Arabidopsis Rhizosphere	MNYIDLYSSYSDPTIAAAWDSQLKEVDKTSWFAQQLATRESELFARFAACYADLRALPRSARRALQ
Ga0157306_103396412	3300012912	Soil	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNEALRRCGDELFARFAACYADLRALPRGARRRLQRRLARSTDFGAALPECLRQSGQRLQ
Ga0126375_111877742	3300012948	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEADNNPWLACTLTECGGELFARFAACYADLRALPRSARRALQRQLAHSSELAAILPEHLQH
Ga0164303_105485852	3300012957	Soil	MNYIDLYSSYSDPTIAAAWDSQVKEVDKTSWLAEKLATRESESFARFAACYADLRALPRSARRALQRRIARS
Ga0164301_113697941	3300012960	Soil	MNYIDLYSSYSDPTIAAAWDSQCKEAEKTPWLANSLAECSDELFARFAGYYSELHALPRAARRALQRRIARSSELAAIFPQYLQHRGRRLQH
Ga0164301_115785661	3300012960	Soil	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLREALKQYGDELFARFAACYADLRALPRGARRSLQRRIARSGKLAAILPEYFQQGGRRLQ
Ga0164302_107865262	3300012961	Soil	MNYLDLYSSYPDHTIAAAWDSQVKEADNTLWLADTLTECGDELSARFAACYAELRAMPRSARRALQRRIARSSELAAILPGYLQH
Ga0164308_120587121	3300012985	Soil	MNYFTLLSSYPDRMIAAWESQIKEEDYNPWLNDALKHSRDNLFARFAIHYAELLALPRGARRALQRRLARSGELGAILSAHQITRRLQFKMASSL
Ga0164304_114728101	3300012986	Soil	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLSDALKQYSDDLFARFAACYADLRALPRGARRSLQRRIARSGKLAAILPEYFQQGGRRLQHKM
Ga0164305_120330901	3300012989	Soil	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNQALMRYGDELFARFAACYMELRALPRAARRRLQRRLARSTDFGAALPECLRQSGQR
Ga0157371_111878672	3300013102	Corn Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVTCYAELKARPRSARRALQRQLARSSELATILPGYFHENGRRLQHKMAWSLAGA
Ga0157370_114783271	3300013104	Corn Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFASFVTCYAELKARPRSARRALQRQL
Ga0157378_101806361	3300013297	Miscanthus Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEADNTLWLADTLTECGDELSARFAACYAELRAMPRSARRALQRRIARSSELAAILPGYLQHRGRRLQHRMAW
Ga0163162_103675422	3300013306	Switchgrass Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEADNTLWLADTLTECGDELSARFAACYAELRALPRSARRALQRRIARSSEL
Ga0075321_10340511	3300014300	Natural And Restored Wetlands	MNYFDQYSSYPDHTIAAAWDYQVKEAAQTPGLGEIFLPRGSELFPRFAACYADLSALPRSARRSLQRKLARSSELATVLPAYLQQGGQRLQHRM
Ga0132257_1011049012	3300015373	Arabidopsis Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLSAALKQYGDELFARFAACYADLRALPRGARRSLQRRIARSGKLAAI
Ga0132257_1016494803	3300015373	Arabidopsis Rhizosphere	MNYLDLYSSYPDRIITSAWNSQLEYANKNPWLNEALKQYGDELFARFAACYADLRALPRGARRSLQRRIARSGKLAAILP
Ga0132257_1033843131	3300015373	Arabidopsis Rhizosphere	MNYFDLYSSYPDSTIAAAWNSQVKEADKTLCLAEELATRESELFARFAACYSELCALPRSARRSLQRRIARSGKLAAI
Ga0132257_1035606081	3300015373	Arabidopsis Rhizosphere	MNYFDLYSSYSDPTIATAWESQVKEVDKTSWLAEKLATRESELFARFAACYADLRALPRSARRALQRRI
Ga0132255_1025794083	3300015374	Arabidopsis Rhizosphere	MNYLDLYSSYPDRIITSAWNSQLEYANKNPWLNEALKQYGDELFARFAAYYSELCALPRSARRALQRRIARSSELAAILPE
Ga0132255_1034267472	3300015374	Arabidopsis Rhizosphere	MNYIDLYSSYSDPTIAAAWESQVKEVDKTSWFAEKLATRESELFARFAACYAELSALPRNARRALQRRIARSSELAAIFP
Ga0182037_109202372	3300016404	Soil	MNYLDLYSSYPDRSITAAWEAQLKYANKNPWFNEALRRYGDELFARFAACYADLRALPRGARRAIQRRIARSSNLPALLPEYVRQGGRHLQH
Ga0184634_100869512	3300018031	Groundwater Sediment	MNYFDLNSIYPEQTIVAAWDSQVAELTRTPRLAEIFQKSGSELFPRFAACYAELRALPRSARRALQHRIARSGELAALFPEWFRSGGGRARQYKLARSLA
Ga0184638_10793863	3300018052	Groundwater Sediment	MNYFDPYPLAADKSIVTAWDSEVARAAQTPWLAEALARAGSELFPRFADCYAQLRALPRGARRA
Ga0184626_102341021	3300018053	Groundwater Sediment	MNYFDLYSSYPDHTIAAAWDAQLAEAAQTPWFKEILLRRGKELFPRFVACYAELRALPRSARRALQRQI
Ga0184626_102742071	3300018053	Groundwater Sediment	MNYFDLYSSYPDRTIAGAWDSQVNEADNASWLSEMLPEHGSEIFLRFAACYAELRALPRSARRALQRR
Ga0184623_102873262	3300018056	Groundwater Sediment	MNHFDLYSTYPDQTIAAAWDSQVKEADKTPWLADTLTECGGELYSRFAACYAELSALPRSARRAIQRRIARSGELAAILPQYLQQGG
Ga0184624_101106143	3300018073	Groundwater Sediment	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLSAALKQYGDELFARFAACYADLRALPRGARRSLQRRIARSGKLAASLPEYFQ
Ga0184640_100230161	3300018074	Groundwater Sediment	MNYFDLYSSYPDQTITVAWDSQVKDAAQTLGLAEILLARGSELFPRFAACYAELRALPRGARRALQR
Ga0184640_103068502	3300018074	Groundwater Sediment	MNYFDLYSSYSDRTIAAAWDSQCKEADESPWLADTLTECGGELFSRFAACYAELRALPRSARRALQRRLAQS
Ga0184633_100059921	3300018077	Groundwater Sediment	MNYFDLYSYYPDHTIAAAWDSQIKEVNKAPWIAETLNRRSNELFPRFAACYAELRALPRGARRALQRRIARSNELAAMFPEKFLQG
Ga0184633_100901502	3300018077	Groundwater Sediment	MNYFDLNSIYPEQTIVAAWDSQVAELTRTPRLAEIFQKSGSELFPRFAACYAELRALPRSARRALQHRIARSGELAALFPE
Ga0184612_105449571	3300018078	Groundwater Sediment	MNYFDLYSLNPNHTIAAAWDSQVKEAAQTPGLAEIFLPRGSELFPRFAACYSDLSALPRSARRALQRRIARSGELAAILPEYLQQGGRRLQRRMAW
Ga0184627_104537431	3300018079	Groundwater Sediment	MNYFDLYSSYPDQTITVAWDSQVKDAAQTLGLAEILLARGSELFPRFAACYAELRALPRGAR
Ga0184639_101994342	3300018082	Groundwater Sediment	MNYFDLYSSYSDRTIAAAWDSQCKEADESPWLADTLTECGGELFSRFAACYAELRALPRSARRALQRRLARSSEVAAILPEYLQQGGRRLQHRMAWTL
Ga0190270_116003381	3300018469	Soil	MKYFDLSASYPDSTIAAAWDSQIKEADKTSWLAEKLVTRESELFARFAACYEDLRALSRNARRTLQRRIACS
Ga0173479_108166121	3300019362	Soil	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVMCYAELKARPRSARRALQRQLARSSELATILPGHFRQS
Ga0210378_101598671	3300021073	Groundwater Sediment	MNYFDLYSLNPNHTIAAAWDSQVKEAAQTPGLAEIFLPRGSELFPRFAACYSDLSALPRSARRALQ
Ga0210378_102916331	3300021073	Groundwater Sediment	MNYFNLYASYPEQTIAAAWDSQLSEAAQTPWFKELLLRRGGELFPRFAACYAELRVLPRSARRALQRQIARSSEP
Ga0210384_115500441	3300021432	Soil	MDYFTLYSSYPDHTIAAAWDSQVKEADKTPRLAGTLTECGDELFARFAECYAELRALPRSARRALQRRLARSGELAAILPEYLQR
Ga0207707_100751911	3300025912	Corn Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVTCYAELKARPRSARRALQRQLARSSELATILPGYFHQNGRRLQHKMAW
Ga0207660_110996112	3300025917	Corn Rhizosphere	MNYFDLYSSHPDHTIAAWDSQIKEANKFAWTAETLNRRGNELFPRFAACYAELCALPRGARRALQRKLARSSEMAAILP
Ga0207652_109630691	3300025921	Corn Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWINEALRRYGDELFARFATCYAELRALPRGARRALQRRLARSSELGAILPKYLQ
Ga0207706_109222031	3300025933	Corn Rhizosphere	MNYFDLYSSYSDPTIAAAWESQVREVDKTSWLAEKLATRESELFARFAACYADLRALPRGARRALQQRI
Ga0207709_102436522	3300025935	Miscanthus Rhizosphere	MNYFDLYSSYSDPTIAAAWDSQVKEVDKTSWIAENLAMRESELFARFAACYSELCALPRSARRALQR
Ga0207712_107847932	3300025961	Switchgrass Rhizosphere	MNYVDLYSSYPDSTIAAAWDSQVKEADKNPWLSEVLKQYGDELFARFAACYADLRALPRNGRRALQRRI
Ga0207668_113728931	3300025972	Switchgrass Rhizosphere	MNYLDLYSSFPDRTITSAWDAQLKYGSKNPWLNQALMRYGDELFARFAACYMELRALPRAARRRLQRRLARSTDFGAALPECLRQSG
Ga0207677_112518461	3300026023	Miscanthus Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVTCYAELKARPRSARRALQRQLARSSELATILPGY
Ga0208419_10296382	3300026032	Natural And Restored Wetlands	MKYFDLYASYPDYTIAAAWESQIKEADRSPWLADTLTESGDELFARFAACYAELRALPRSARRALQRRIARS
Ga0209982_10506261	3300027552	Arabidopsis Thaliana Rhizosphere	MNYFDLYSSYPNPTIAAAAWDSQLKEANKAPWIAEMLNQRGNEFFPRFEVCYGELRSLPRSARRGLQRQLACSSELAAILPEYLQQGG
Ga0209819_100554562	3300027722	Freshwater Sediment	MNYFDLYSSYPDRTIAAAWESQVKEADNTPWLGDTLTECGDELFARFAACYAELRTLPRSARRALQRQLARSSELAAILPEYLQHGGRRLQH
Ga0299906_111609972	3300030606	Soil	MNYFNLLSSYQDPTIAAAWQSQVKEAEKTPWLADALRQCGDELFARFAVRYMELRALPRGARRALQRRIARCTALTELSPEHLQHGGGRLQHRMAWSL
Ga0310888_103335152	3300031538	Soil	MKYFDLYGSYPYHTIAAAWDSRSKEADWESLLAETLTAGESELQARFGACYAELRALPRSARRALQRRIARSSQLA
Ga0307468_1019199661	3300031740	Hardwood Forest Soil	MNYFDLYSSYPDSTIAAAWNSQVKEADKTLCLAEELATRESELFARFAACYSELCALPRSARRALQREIARSG
Ga0310884_110039011	3300031944	Soil	MNYLDLYSSYPDHSIAAAWDSQVKEADKNPWLSEALKQYGDELFARFAACYADLRALPRGARRSLQRRIARSGKLAAI
Ga0306924_114839131	3300032076	Soil	MNYFDLYSSYPDRTIAAAWDSQVKEADTTPWLTECGDELFARFAACYAELRALPRDARRALQRQLARSSELAGILPEYLQQ
Ga0307472_1011978242	3300032205	Hardwood Forest Soil	MNYFDLYSSYSDPTIAAAWNSQVKEADKTLCLAEELATRESELFARFAACYSELCALPRSARRALQRRIAPLQRAGSDLAGILAAG
Ga0316624_114181682	3300033486	Soil	MNYFDLYSSYPDRTIATAWDSQVKEADKTSWLADKLATREGELFARFAACYAELRALPRSARRALQRRIARSSELAATLPEYLQQGGRRLQHRMAWSLAGAA
Ga0364925_0029551_2_259	3300034147	Sediment	MNYFDLYSSYPDRTIVAAWDSQVKEADNTPWLAGTLTEYGDELFARFAACHAELRALPRSARRALQRQLARSSELAAILPEYLQQG
Ga0364927_0220135_1_249	3300034148	Sediment	MNYFDLYSSYPDRTIVAAWDSQVKEADNTPWLAGTLTEYGDELFARFAACHAELRALPRSARRALQRQLARSSELAAILPEYL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067494

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences