Metagenome / Metatranscriptome Family F067349

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Overview

Basic Information
Family ID	F067349
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	93 residues
Representative Sequence	MPAPNRLSILISAALAVATPLLAGSMAWRLLDDDRRSGLIYVLVYWPSILLDRLPAAAAEAFTLSALPTVLLYFAGYLLLCQGVRALWRRRR
Number of Associated Samples	99
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.00 %
% of genes near scaffold ends (potentially truncated)	32.80 %
% of genes from short scaffolds (< 2000 bps)	72.00 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (12.800 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (31.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00583	Acetyltransf_1	14.40
PF05656	DUF805	14.40
PF07021	MetW	7.20
PF01809	YidD	6.40
PF00378	ECH_1	4.80
PF11253	DUF3052	1.60
PF12146	Hydrolase_4	1.60
PF01546	Peptidase_M20	1.60
PF00561	Abhydrolase_1	1.60
PF00486	Trans_reg_C	0.80
PF01494	FAD_binding_3	0.80
PF13304	AAA_21	0.80
PF00990	GGDEF	0.80
PF13508	Acetyltransf_7	0.80
PF02518	HATPase_c	0.80
PF00246	Peptidase_M14	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	14.40
COG0759	Membrane-anchored protein YidD, putatitve component of membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	6.40
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.60
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.80
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.80
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.80

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.80 %
Unclassified	root	N/A	35.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.80 %
Unclassified	root	N/A	35.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.40 %
Unclassified	root	N/A	35.20 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.20 %
Unclassified	root	N/A	35.20 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.40 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	49.60 %
Unclassified	root	N/A	35.20 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	41.60 %
Unclassified	root	N/A	35.20 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.40 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	6.40 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.40 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.60 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas	4.80 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Palaeoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Ephemeroptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Furcatergalia	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Scapphodonta	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Ephemeridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Ephemera	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Pelomonas puraquae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	4.80 %
Ephemera danica	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica	2.40 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.80 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002705\|JGI25156J39149_1011760	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica	1962	Open in IMG/M
3300002705\|JGI25156J39149_1032882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	762	Open in IMG/M
3300003761\|Ga0055535_1000252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	56714	Open in IMG/M
3300005327\|Ga0070658_10156064	All Organisms → cellular organisms → Bacteria → Proteobacteria	1913	Open in IMG/M
3300005327\|Ga0070658_10176776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1795	Open in IMG/M
3300005327\|Ga0070658_10952235	Not Available	746	Open in IMG/M
3300005339\|Ga0070660_100122752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2073	Open in IMG/M
3300005344\|Ga0070661_100720724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	814	Open in IMG/M
3300005364\|Ga0070673_100059602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3022	Open in IMG/M
3300005364\|Ga0070673_101251636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	696	Open in IMG/M
3300005454\|Ga0066687_10248108	All Organisms → cellular organisms → Bacteria → Proteobacteria	992	Open in IMG/M
3300005513\|Ga0077120_1026662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4119	Open in IMG/M
3300005519\|Ga0077119_10008421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	11121	Open in IMG/M
3300005519\|Ga0077119_10032051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4147	Open in IMG/M
3300005519\|Ga0077119_10075334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2030	Open in IMG/M
3300005519\|Ga0077119_10139093	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300005563\|Ga0068855_100213595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2167	Open in IMG/M
3300005640\|Ga0075035_1000137	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300009176\|Ga0105242_10365830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1336	Open in IMG/M
3300009500\|Ga0116229_10517233	Not Available	987	Open in IMG/M
3300009510\|Ga0116230_10348376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1162	Open in IMG/M
3300009660\|Ga0105854_1067449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1095	Open in IMG/M
3300009709\|Ga0116227_10200353	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica	1551	Open in IMG/M
3300009709\|Ga0116227_10349035	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica	1130	Open in IMG/M
3300009709\|Ga0116227_10760901	Not Available	731	Open in IMG/M
3300009787\|Ga0116226_10114966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2789	Open in IMG/M
3300009787\|Ga0116226_10961294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	825	Open in IMG/M
3300010152\|Ga0126318_10687344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	708	Open in IMG/M
3300010331\|Ga0123336_10081974	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300010869\|Ga0126359_1621428	Not Available	507	Open in IMG/M
3300010877\|Ga0126356_10571427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1694	Open in IMG/M
3300014168\|Ga0181534_10884571	Not Available	533	Open in IMG/M
3300014745\|Ga0157377_10819664	Not Available	688	Open in IMG/M
3300014969\|Ga0157376_11442968	Not Available	720	Open in IMG/M
3300015262\|Ga0182007_10028598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1913	Open in IMG/M
3300015262\|Ga0182007_10214295	Not Available	678	Open in IMG/M
3300021181\|Ga0210388_11486963	Not Available	566	Open in IMG/M
3300021403\|Ga0210397_10080897	All Organisms → cellular organisms → Bacteria → Proteobacteria	2153	Open in IMG/M
3300021405\|Ga0210387_10326781	Not Available	1352	Open in IMG/M
3300021432\|Ga0210384_10000008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	331856	Open in IMG/M
3300021475\|Ga0210392_10693968	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300021478\|Ga0210402_10528394	All Organisms → cellular organisms → Bacteria → Proteobacteria	1095	Open in IMG/M
3300022561\|Ga0212090_10401161	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300022908\|Ga0247779_1012903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2573	Open in IMG/M
3300025147\|Ga0209511_1323638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	528	Open in IMG/M
3300025230\|Ga0209563_108929	All Organisms → cellular organisms → Bacteria → Proteobacteria	1551	Open in IMG/M
3300025242\|Ga0209258_100080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	255287	Open in IMG/M
3300025250\|Ga0209026_1015848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1230	Open in IMG/M
3300025256\|Ga0209759_1000827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	24481	Open in IMG/M
3300025256\|Ga0209759_1004836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4899	Open in IMG/M
3300025909\|Ga0207705_10102359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2108	Open in IMG/M
3300025909\|Ga0207705_10111321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2023	Open in IMG/M
3300025919\|Ga0207657_10055442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3423	Open in IMG/M
3300025919\|Ga0207657_10870499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	695	Open in IMG/M
3300025932\|Ga0207690_10049437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2803	Open in IMG/M
3300025934\|Ga0207686_10356363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1103	Open in IMG/M
3300025942\|Ga0207689_11325601	Not Available	604	Open in IMG/M
3300025960\|Ga0207651_10115440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2024	Open in IMG/M
3300025960\|Ga0207651_11405313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	628	Open in IMG/M
3300026089\|Ga0207648_10311753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1412	Open in IMG/M
3300027807\|Ga0209208_10469933	Not Available	594	Open in IMG/M
3300028562\|Ga0302151_10000089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	54330	Open in IMG/M
3300028562\|Ga0302151_10095423	Not Available	1045	Open in IMG/M
3300028666\|Ga0265336_10000030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	169335	Open in IMG/M
3300028762\|Ga0302202_10416673	Not Available	620	Open in IMG/M
3300028765\|Ga0302198_10016859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5491	Open in IMG/M
3300028789\|Ga0302232_10482233	Not Available	610	Open in IMG/M
3300028813\|Ga0302157_10238580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1021	Open in IMG/M
3300028865\|Ga0302291_10094522	Not Available	992	Open in IMG/M
3300028882\|Ga0302154_10233725	Not Available	922	Open in IMG/M
3300029882\|Ga0311368_10082773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2793	Open in IMG/M
3300029910\|Ga0311369_10209347	All Organisms → cellular organisms → Bacteria → Proteobacteria	1808	Open in IMG/M
3300029911\|Ga0311361_11470602	Not Available	517	Open in IMG/M
3300029945\|Ga0311330_10919825	Not Available	652	Open in IMG/M
3300029951\|Ga0311371_10358575	All Organisms → cellular organisms → Bacteria → Proteobacteria	2011	Open in IMG/M
3300029951\|Ga0311371_11985608	Not Available	618	Open in IMG/M
3300029951\|Ga0311371_12413280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	539	Open in IMG/M
3300029952\|Ga0311346_11369110	Not Available	538	Open in IMG/M
3300029953\|Ga0311343_10990109	Not Available	662	Open in IMG/M
3300029954\|Ga0311331_10569397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1082	Open in IMG/M
3300029987\|Ga0311334_11028781	Not Available	686	Open in IMG/M
3300029988\|Ga0302190_10225651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas puraquae	759	Open in IMG/M
3300029990\|Ga0311336_10692085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	874	Open in IMG/M
3300029994\|Ga0302283_1334806	Not Available	516	Open in IMG/M
3300030000\|Ga0311337_11698895	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300030002\|Ga0311350_10389740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1248	Open in IMG/M
3300030010\|Ga0302299_10361753	Not Available	746	Open in IMG/M
3300030114\|Ga0311333_10556111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	946	Open in IMG/M
3300030339\|Ga0311360_11267203	Not Available	579	Open in IMG/M
3300030503\|Ga0311370_11397998	Not Available	740	Open in IMG/M
3300030519\|Ga0302193_10457462	Not Available	637	Open in IMG/M
3300030520\|Ga0311372_10008256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	23277	Open in IMG/M
3300030520\|Ga0311372_10537922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1697	Open in IMG/M
3300030520\|Ga0311372_12606781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	563	Open in IMG/M
3300030521\|Ga0307511_10211910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	987	Open in IMG/M
3300030646\|Ga0302316_10329144	Not Available	616	Open in IMG/M
3300030687\|Ga0302309_10276589	Not Available	839	Open in IMG/M
3300030838\|Ga0311335_10926122	Not Available	620	Open in IMG/M
3300031232\|Ga0302323_102056748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	649	Open in IMG/M
3300031232\|Ga0302323_102131002	Not Available	638	Open in IMG/M
3300031232\|Ga0302323_103317679	Not Available	513	Open in IMG/M
3300031235\|Ga0265330_10482085	Not Available	527	Open in IMG/M
3300031521\|Ga0311364_12308337	Not Available	525	Open in IMG/M
3300031572\|Ga0318515_10029190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2679	Open in IMG/M
3300031730\|Ga0307516_10029419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5555	Open in IMG/M
3300031765\|Ga0318554_10455577	Not Available	725	Open in IMG/M
3300031770\|Ga0318521_10063082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1951	Open in IMG/M
3300031793\|Ga0318548_10107544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1340	Open in IMG/M
3300031833\|Ga0310917_11174334	Not Available	511	Open in IMG/M
3300031835\|Ga0318517_10371785	Not Available	646	Open in IMG/M
3300031879\|Ga0306919_10278766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1264	Open in IMG/M
3300031890\|Ga0306925_10135442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2645	Open in IMG/M
3300031902\|Ga0302322_100157432	All Organisms → cellular organisms → Bacteria → Proteobacteria	2441	Open in IMG/M
3300031918\|Ga0311367_10757949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	984	Open in IMG/M
3300031918\|Ga0311367_12374737	Not Available	506	Open in IMG/M
3300031938\|Ga0308175_101706828	Not Available	705	Open in IMG/M
3300031946\|Ga0310910_11500499	Not Available	517	Open in IMG/M
3300031954\|Ga0306926_10033697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6030	Open in IMG/M
3300032035\|Ga0310911_10015785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3542	Open in IMG/M
3300032074\|Ga0308173_10018752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4580	Open in IMG/M
3300032074\|Ga0308173_12063550	Not Available	538	Open in IMG/M
3300034170\|Ga0370487_0004029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3687	Open in IMG/M
3300034170\|Ga0370487_0009887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2585	Open in IMG/M
3300034170\|Ga0370487_0328150	Not Available	521	Open in IMG/M
3300034281\|Ga0370481_0282460	Not Available	599	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.60%
Host-Associated	Host-Associated	38.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.60%
Plants	Host-Associated → Plants	38.40%
Aquatic	Environmental → Aquatic	4.00%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	33.60%
Soil	Environmental → Terrestrial → Soil	23.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.60%
Roots	Host-Associated → Plants → Roots	11.20%
Peat Moss	Host-Associated → Plants → Peat Moss	6.40%
Freshwater	Environmental → Aquatic → Freshwater	4.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.20%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	33.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.80%
Epiphytes	Host-Associated → Plants → Roots → Epiphytes	7.20%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	6.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.20%
Ice	Environmental → Aquatic → Freshwater → Ice	2.40%
Endophytes	Host-Associated → Plants → Roots → Endophytes	2.40%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	33.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.80%
Unclassified	Host-Associated → Plants → Roots → Epiphytes → Unclassified	7.20%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.20%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	2.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.40%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.60%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	12.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.20%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	11.20%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.00%
Arabidopsis Root	Host-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root	7.20%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	6.40%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.20%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.40%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	2.40%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.60%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.60%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.80%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002705	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS	Host-Associated	Open in IMG/M
3300003761	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005513	Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005519	Combined assembly of arab plate scrape CL_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010331	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300025147	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025230	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025242	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025250	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes)	Host-Associated	Open in IMG/M
3300025256	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25156J39149_10117601	3300002705	Arabidopsis Root	PDRPSILISAALAVATPFLGGAMAWRLLDDDGRSGLVYVLVYWPSILLDALPPVVADAFTVSALPTVLLYFAGYLLLCQGVRAAWKRIAAIRFYRRHA*
JGI25156J39149_10328822	3300002705	Arabidopsis Root	MPAPNRLSILISAALAVATPLLAGAHAWRLVDEGRRRDAADVLLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRSIR*
Ga0055535_100025230	3300003761	Arabidopsis Root	MAAPDRPSILISAALAVATPFLGGAMAWRLLDDDGRSGLVYVLVYWPSILLDALPPVVADAFTVSALPTVLLYFAGYLLLCQGVRAAWKRIAAIRFYRRHA*
Ga0070658_101560642	3300005327	Corn Rhizosphere	MPAPNRLSVLISAALAVATPLLAGAHAWQLVDEDRRWGAGDVLLYWPSLLLDELPPRAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRWIR*
Ga0070658_101767764	3300005327	Corn Rhizosphere	MPAPNRPCILVSAALAVATPFVAGAQAWRLLDEGRRWGAVDVLLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLCRFARTLWRLIRRP*
Ga0070658_109522351	3300005327	Corn Rhizosphere	ASQWRRMPAPNRLSVLISAALAVATPLLAGAHAWRLVDEGRRWDAGDLLLYWPSLLLDQLPPRAAEAFQLSALPTVLLYFCGYLLLCQLGRTLWRSLR*
Ga0070660_1001227523	3300005339	Corn Rhizosphere	VQASQWRRMPAPNRLSVLISAALAVATPLLAGAHAWRLVDEGRRWDAGDLLLYWPSLLLDQLPPRAAEAFQLSALPTVLLYFCGYLLLCQLGRTLWRSLR*
Ga0070661_1007207242	3300005344	Corn Rhizosphere	MSAPNRLSVLISAALAVATPLLAGAHAWQLVDEDRRWGAGDVLLYWPSLLLDELPPRAAETFQRSALPTVLLYFGGYLLLCQLARTLWRWIR*
Ga0070673_1000596022	3300005364	Switchgrass Rhizosphere	MPAPNRLSILISAALAVATPLLAGANAWRLVDEGRRWSAGDALLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRLIR*
Ga0070673_1012516361	3300005364	Switchgrass Rhizosphere	MPAPNRLSVLISAALAVATPLLAGAHAWQLVDEDRRWGAGDVLLYWPSLLLDELPPRAAETFQRSALPTVLLYFGGYLLLCQLARTLWRWIR*
Ga0066687_102481081	3300005454	Soil	LPGLVLGAGMPAPQWRRMPAPNRLSILICAALAVATPLLAGANAWRLVDEGRRWTAGDALLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLSHLARTLWRLIR*
Ga0077120_10266625	3300005513	Arabidopsis Rhizosphere	MQASQWRRMLAPNRLSVLISAALAVATPLLAGAHAWRLVDEEHHWDGGDVLLYWPSLLLDQLPPLAAEAFQRSALPTVLLYFFGYLLMCQLARTLWRSIR*
Ga0077119_1000842110	3300005519	Arabidopsis Root	MPRMPAPSRVTILTCAALAVASPLVAGAQAWRLVDEEPRSGACYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFAGYLALGWGVQALWRRLR*
Ga0077119_100320516	3300005519	Arabidopsis Root	MPAPNRLSVLICAALAVATPLLAGARAWQLVDESPHAGVGYVLLYWPSLLLEQLPVPAAEAFQRSALPTVLLYFGGYLLLCQLARALWRLIR*
Ga0077119_100753343	3300005519	Arabidopsis Root	MAAPTRLTVLVSAALAVASPLVAGGMAWGYLDEDSRHGLVYWLTYWPSILLDLLPPRAAEAFTLSALPTVLLYFGGYLALCEGVRALWRRWR*
Ga0077119_101390933	3300005519	Arabidopsis Root	MSVANRLTVLIAAALAVATPLVAGARAWRLVDEEPRSGALYLLLYWPSILIDQLPARAAQAFTLSALPTVLLYFGGYLALGLGVQALWRGLR*
Ga0068855_1002135953	3300005563	Corn Rhizosphere	MPAPNRLSVLISAALAVATPLLAGAHAWRLVDEGRRWDAGDLLLYWPSLLLDQLPPRAAEAFQLSALPTVLLYFCGYLLLCQLGRTLWRSLR*
Ga0075035_10001371	3300005640	Permafrost Soil	MSAPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDLLPNAAADAFTLSALPTVLLYFAGYLLLCQGVRAVWRASR*
Ga0105242_103658302	3300009176	Miscanthus Rhizosphere	MAAPTRLTILLSAALAVASPLVAGAMAWGYLDEDRRHGLAYWLVYWPSILLDLLPARAAEAFTLSALPTVLLYFGGYLAVCEGVRALWHRIR*
Ga0116229_105172332	3300009500	Host-Associated	MAAPNRSSILISAALAVATPLLAGTMAWRLVDEEPRSGPLFVLTYWPSLLLDLLPDRAAQAFTYSALPTVLLYFGGYLLLCQGVRSLWRRLRSAAAR*
Ga0116230_103483763	3300009510	Host-Associated	MRQARISAGATREWQPMAAPNRSSILISAALAVATPLLAGTMAWRLVDEEPRGGLLFVLTYWPSLLLDLLPDRAAQAFTYSALPTVLLYFGGYLLLCQLLRSLWHRLRSGAAR*
Ga0105854_10674492	3300009660	Permafrost Soil	MPAPNRLSILISAALAVATPLLAGAMAWHYLDDDRRSGWIYVLVYWPSILLDRLPARAAEAFTLSALPTVLLYFAGYLLLCQGARALWRRLS*
Ga0116227_102003533	3300009709	Host-Associated	MRQARISAGATREWQPMAAPNRSSILISAALAVATPLLAGTMAWRLVDEEPRSGPLFVLTYWPSLLLDLLPDRAAQAFTYSALPTVLLYFGGYLLLCQGVRSLWRRLRSAAAR*
Ga0116227_103490352	3300009709	Host-Associated	MTALHRPSILISAALAVATPLVAGSQAWSYLDESNRHGVAYVVLYWPSILLSHLPPAATRAFTLSALPMVLMYFAGYLLVCRVVRAAFRRAGT*
Ga0116227_107609012	3300009709	Host-Associated	MPAPNRLSILISAALAVCTPLLGGAMAWRLLDDDGRTGPAYVLVYWPSILLDALPDVVAEAFTVSALPTVLLYFGGYLLLCQALRACWRALR*
Ga0116226_101149664	3300009787	Host-Associated	MRQARISAGATREWQPMAAPNRSSILISAALAVATPLLAGTMAWRLVDEEPRSGPLFVLTYWPSLLLDLLPDRAAQAFTDSALPTVLLYFGGYLLLFQGVRSLWRRLRSAAAR*
Ga0116226_109612941	3300009787	Host-Associated	TREWQPMAAPNRSSILISAALAVATPLLAGTMAWRLVDEEPRSGPLFVLTYWPSLLLDLLPDRAAQAFTYSALPTVLLYFGGYLLLCQLVRSLWRRLRSAAAR*
Ga0126318_106873442	3300010152	Soil	MQASQWRCMSAPNRLSVLISAALAVATPLLAGARAWRLVDESRRWDAGDVLLYWPSLLLDQLPARAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRSIR*
Ga0123336_100819744	3300010331	Glacier Valley	MVAPNRPSILISAALAVATPLLGGAMAWRLLDDAGRSGLVYVLVYWPSILIDALPTVAADAFTESALPTVLLYFGGYLLVCQAVRSLWRRVR*
Ga0126359_16214281	3300010869	Boreal Forest Soil	MAAPNRLSILISAALAVATPLVAGAMAWSYLDEDRRSGPVFVLLYWPSILLDRLPPRAADAFTVSALPTVLLYFAGYLLLCQGVLALWRRVR*
Ga0126356_105714273	3300010877	Boreal Forest Soil	MPAPNRLSILISAALAVATPLLAGAMAWHYLDDDRRSGWIYVLVYWPSILLDRLPARAADAFTLSALPTVLLYFAGYLLLCQGARALWRRLP*
Ga0181534_108845712	3300014168	Bog	MAAPDRPSILISAALAVCTPLLGGAMAWRLLDDDGRTGPAYVLVYWPSILLDALPDVVAEAFTVSALPTVLLYFGGYLLLCQALRACWRALR*
Ga0157377_108196642	3300014745	Miscanthus Rhizosphere	MPAPNRLSVLISAALAVTTPLLAGAHAWRLVDESRRWDAADVLLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRSIR*
Ga0157376_114429681	3300014969	Miscanthus Rhizosphere	MAAPTRLTILLSAALAVASPLVAGAMAWGYLDEDRRHGLAYWLVYWPSILLDLLPARAAEAFTLSALPTVLLYFGGYLAVCEGVRALWHRT
Ga0182007_100285982	3300015262	Rhizosphere	MPAPNRLSVLISAALAVATPLLAGAGAWQLVDEAPHAGVGYLLLYWPSLLLEQLPARAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRLIR*
Ga0182007_102142952	3300015262	Rhizosphere	MPAPNRLSVLISAALAVATPLLAGARAWRLVDEGRRWDAGDLLLYWPSLLLDQLPPRAAEAFQLSALPTVLLYFCGYLLLCQLGRTLWRSLR*
Ga0210388_114869631	3300021181	Soil	APNRFSVLVSAALAVATPLLAGSMAWRLVDEEPRSGPGYVLLYWPSLLFDLLPARAADAFNFSALPTVLLYFGGYLLLCQLARTLWRWMR
Ga0210397_100808973	3300021403	Soil	MPAPNRFSVLVSAALAVATPLLAGSMAWRLVDEEPRSGPGYVLLYWPSLLFDLLPARAADAFNFSALPTVLLYFGGYLLLCQLARTLWRWMR
Ga0210387_103267812	3300021405	Soil	MPSNRLSILLSAALAVATPFLAGSMAWGYVDEDRRSGVVYVLLYWPSILIDSLPARFAEGFTRSALPTVLLYFGGYLLLCQGARALWRRVR
Ga0210384_1000000815	3300021432	Soil	MAAPNRPSILISAALAVATPFLGGAMAWRLLDDDGRSGLVYVLVYWPSILLDALPGVVADAFTVSALPTVLLYFGGYLLLCQGVRALWRRPR
Ga0210392_106939682	3300021475	Soil	MHAPDRLSILISAALAVATPLLAGAMAWHYLDDDRRAGWIYVLVYWPSILLDRLPARAAEAFTLSALPTVLLYFAGYLLLCQGARALWRRLP
Ga0210402_105283942	3300021478	Soil	MPAPNRPCILISAALAVATPLLAGAMAWRLVDEEPRSGVGYVLLYWPSLLLAQLPPRAAEAFQLSALPTVLLYFGGYLLLCQLARTLWRRIR
Ga0212090_104011612	3300022561	Glacier Valley	MVAPNRPSILISAALAVATPLLGGAMAWRLLDDAGRSGLVYVLVYWPSILIDALPTVAADAFTESALPTVLLYFGGYLLVCQAVRSLWRRVR
Ga0247779_10129031	3300022908	Plant Litter	MPAPTRFCILICAALAVATPLLAGAMAWGVLDEDRRHGPVFWLVFWPSALIDLLPRRAAEAFTLSALPTVLLYFGGYLALCRLAGALWRRIR
Ga0209511_13236381	3300025147	Glacier Valley	SSILISAALAVATPLLGGAMAWRLLDDAGRSGLVYVLVYWPSILIDALPTVAADAFTESALPTVLLYFGGYLLVCQAVRSLWRRVR
Ga0209563_1089293	3300025230	Arabidopsis Root	MQASQWRRMLAPNRLSVLISAALAVATPLLAGAHAWRLVDEEHHWDGGDVLLYWPSLLLDQLPPLAAEAFQRSALPTVLLYFFGYLLMCQLARTLWRSIR
Ga0209258_10008026	3300025242	Arabidopsis Root	MAAPDRPSILISAALAVATPFLGGAMAWRLLDDDGRSGLVYVLVYWPSILLDALPPVVADAFTVSALPTVLLYFAGYLLLCQGVRAAWKRIAAIRFYRRHA
Ga0209026_10158483	3300025250	Arabidopsis Root	MPAPNRLSVLICAALAVATPLLAGARAWQLVDESPHAGVGYVLLYWPSLLLEQLPVPAAEAFQRSALPTVLLYFGGYLLLCQLARALWRLIR
Ga0209759_100082712	3300025256	Arabidopsis Root	MPAPNRLSILISAALAVATPLLAGAHAWRLVDEGRRRDAADVLLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRSIR
Ga0209759_10048365	3300025256	Arabidopsis Root	MPRMPAPSRVTILTCAALAVASPLVAGAQAWRLVDEEPRSGACYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFAGYLALGWGVQALWRRLR
Ga0207705_101023594	3300025909	Corn Rhizosphere	MPAPNRLSVLISAALAVATPLLAGAHAWQLVDEDRRWGAGDVLLYWPSLLLDELPPRAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRWIR
Ga0207705_101113214	3300025909	Corn Rhizosphere	MPAPNRPCILVSAALAVATPFVAGAQAWRLLDEGRRWGAVDVLLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLCRFARTLWRLIRRP
Ga0207657_100554423	3300025919	Corn Rhizosphere	VQASQWRRMPAPNRLSVLISAALAVATPLLAGAHAWRLVDEGRRWDAGDLLLYWPSLLLDQLPPRAAEAFQLSALPTVLLYFCGYLLLCQLGRTLWRSLR
Ga0207657_108704991	3300025919	Corn Rhizosphere	MQASQWHRMPAPNRLSVLISAALAVATPLLAGARAWRLVDEQRHWSAGDLLLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRSIR
Ga0207690_100494375	3300025932	Corn Rhizosphere	MPAPNRLSVLISAALAVATPLLAGAHAWRLVDEGRRWDAGDLLLYWPSLLLDQLPPRAAEAFQLSALPTVLLYFCGYLLLCQLGRTLWRSLR
Ga0207686_103563632	3300025934	Miscanthus Rhizosphere	MAAPTRLTILLSAALAVASPLVAGAMAWGYLDEDRRHGLAYWLVYWPSILLDLLPARAAEAFTLSALPTVLLYFGGYLAVCEGVRALWHRIR
Ga0207689_113256012	3300025942	Miscanthus Rhizosphere	MFVAVASPLVAGAMAWGYLDEDRRHGLAYWLVYWPSILLDLLPARAAEAFTLSALPTVLLYFGGYLAVCEGVRALWHRIR
Ga0207651_101154402	3300025960	Switchgrass Rhizosphere	MPAPNRLSILISAALAVATPLLAGANAWRLVDEGRRWSAGDALLYWPSLLLDQLPPRAAEAFQRSALPTVLLYFGGYLLLCQLARTLWRLIR
Ga0207651_114053131	3300025960	Switchgrass Rhizosphere	ARLPAWGVHEASQWRRMPAPNRLSVLISAALAVATPLLAGAHAWQLVDEDRRWGAGDVLLYWPSLLLDELPPRAAETFQRSALPTVLLYFGGYLLLCQLARTLWRWIR
Ga0207648_103117531	3300026089	Miscanthus Rhizosphere	MAAPTRLTILLSAALAVASPLVAGAMAWGYLDEDRRHGLAYWLVYWPSILLDLLPARAAEAFTLSALPTVLLYFGGYLA
Ga0209208_104699332	3300027807	Host-Associated	TPLLAGTMAWRLVDEEPRGGLLFVLTYWPSLLLDLLPDRAAQAFTYSALPTVLLYFGGYLLLCQLLRSLWHRLRSGAAR
Ga0302151_1000008931	3300028562	Bog	MVAPNRPSILISAALAVCTPLLGGSMAWRLLDDDGRTGLVYVLVYWPSILLDALPGVIADAFTVSALPTVLLYFGGYLLLCQAMRASWRALR
Ga0302151_100954232	3300028562	Bog	MPTPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDQLPTAAADAFTLSALPTVLLYFAGYLLLCQGVRAAWRASR
Ga0265336_1000003075	3300028666	Rhizosphere	MAAPHRLDILISAALAVATPLLAGPRAWRLLDEQAHPGALDVLLFWPSLLIDQLPARAAEAFTLSALPTVLLYFGGYLLLCQGARALWRRAR
Ga0302202_104166732	3300028762	Bog	MSAPNRLSILISAALAVATPRLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDLLPTAAADAFTLSALPTVLLYFAGYLLLCQ
Ga0302198_100168596	3300028765	Bog	MVAPNRPIILISAALAVCTPLLGGSMAWRLLDDDGRTGLVYVLVYWPSILLDALPGVIADAFTVSALPTVLLYFGGYLLLCQAMRASWRALR
Ga0302232_104822331	3300028789	Palsa	MSAPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDQLPTAAADAFTLSALPTVLLYFAGY
Ga0302157_102385803	3300028813	Bog	AHCRRGTREWQPMAAPNRSSILISAALAVATPLLAGTMAWRLVDEEPHRGPLFVLTYWPSLMLDLLPDRAAQAFTYSALPTVLLYFGGYLLLCQLVRSLWRRLRSAAAR
Ga0302291_100945223	3300028865	Fen	MRAPNRLSILVSAALAVATPLLAGAMAWRLLDDDGRSGLVYVLVYWPSILLDHLPPAAAEAFTLSALPTVLLYFAGYLLLCQAVRSLWRRAR
Ga0302154_102337252	3300028882	Bog	MAAPDRLSILISAALAVVTPFLAGAMAWGYLDEDRRSGIVYVLLYWPSILIDRLPARLADGFTRSALPTVLLYFGGYLVLCQGVRAVWRRLR
Ga0311368_100827735	3300029882	Palsa	MSAPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDQLPTAAADAFTLSALPTVLLYFAGYLLLCQGVRAVWRASR
Ga0311369_102093473	3300029910	Palsa	MSAPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDQWPTAAADAFTLSALPTVLLYFAGYLLLCQGVRAARRASR
Ga0311361_114706021	3300029911	Bog	MSAPNRLSILISAALAVATPRLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDLLPTAAADAFTLSALPTVLLYFAGYLLLCQGVRAVWRASR
Ga0311330_109198252	3300029945	Bog	MAAPDRPSILVSAALAVATPFLGGAMAWRLLDDDGRSGLVYVLVYWPSILLDALPGVVADAFTVSALPTVLLYFGGYLLLCQAVRAFWRRRR
Ga0311371_103585754	3300029951	Palsa	MSAPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDQLPTAAADAFTLSALPTVLLYFAGYLLLCQGVRAARRASR
Ga0311371_119856081	3300029951	Palsa	MTAPNRLGIQLSAAQAVATPLLAGSMAWRLLDDDRRTGVVYVLLYWPSILIDCMPPRFAEGFTRSALPTVLLYFGGYLLLCQAARAVWRRVR
Ga0311371_124132801	3300029951	Palsa	LSVLLCAALAVATPLLAGSMAWRLLDDDRRSGAVYVVLYWPSILIDCLPARFAEGFTRSALPTVLLYFGGYLLLCQGARALWRHVR
Ga0311346_113691101	3300029952	Bog	EWWPMAAPNRPSILISAALAVCTPLLGGAMAWRLLDDDGRTGPAYVLVYWPSILLDALPAVVAEAFTVSALPTVLLYFGGYLLLCQALRACWRALR
Ga0311343_109901092	3300029953	Bog	EAQREWRHMSAPNRLSILISAALAVATPRLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDLLPTAAADAFTLSALPTVLLYFAGYLLLCQGVRAAWRASR
Ga0311331_105693971	3300029954	Bog	SILISAALAVATPLLAGTMAWRLVDEEPHRGPLFVLTYWPSLLLDLLPDRAAQAFTYSALPTVLLYFGGYLLLCQLVRSLWRRLRSAAAR
Ga0311334_110287812	3300029987	Fen	MPAPNRLSILVSAALAVATPLVAGAMAWRLLDEDGRSGLVYVLVYWPSILLDHLPPAAAEAFTLSALPTVLLYFAGYLLLCQAVRSLWRRAR
Ga0302190_102256511	3300029988	Bog	SHDRGARREWRPMVAPNRPSILISAALAVCTPLLGGSMAWRLLDDDGRTGLVYVLVYWPSILLDALPGVIADAFTVSALPTVLLYFGGYLLLCQAMRASWRALR
Ga0311336_106920852	3300029990	Fen	MPAPNRPSILISAALAVATPLLAGASAWHYLDEDRRTGLIYVLLYWPSILIDALPARAAEAFTLSALPTVLLYFGGYLLLCQAARAVWRRLR
Ga0302283_13348061	3300029994	Fen	MSAPNRLSILISAALAVATPRLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDQLPTAAADAFTLSALPTVLLYF
Ga0311337_116988952	3300030000	Fen	MPAPNRPSILISAALAVATPLLAGASAWHYLDEDRRTGLIYVLLYWPSILIDALPARAAEAFTLSALPTVLLYFGGYLLRCQAARAVWRRLR
Ga0311350_103897403	3300030002	Fen	MTAPNRLSILVSAALAVATPLLAGAMAWRLLDEDGRSGLVYVLVYWPSILLDHLPPAAAEAFTLSALPTVLLYFAGYLLLCQAVRSLWRRAR
Ga0302299_103617532	3300030010	Fen	MPAPNRPSILISAALAVATPLLAGASAWHYLDEDRRTGLIYVLLYWPSILIDALPARAAEAFTLSALPTVLLYFGGYLLLCQAARGVWRRLR
Ga0311333_105561113	3300030114	Fen	MRAPNRLSILVSAALAVATPLLAGAMAWRLLDDDGRSGLVYVLVYWPSILLDQLPPAAADAFTLSALPTVLIYFAGYLLLCLGVRSLWRRAR
Ga0311360_112672032	3300030339	Bog	MPAPNRPSILISAALAVATPLLAGASAWHYLDEDRRTGLIYVLLYWPSILIDALPARAAEAFTLSALPTVLLYFGGYLLLCQA
Ga0311370_113979982	3300030503	Palsa	MSAPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDQLPTAAADAFTLSALPTVLLYFAGYLLLCQ
Ga0302193_104574622	3300030519	Bog	MSAPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDLLPTAAADAFTLSALPTVLLYFAGYLLLCQGVRAAWRASR
Ga0311372_100082564	3300030520	Palsa	MSAPNRLSILISAALAVATPLLAGSMAWRLLDDDGRSGLVYVLVFWPSILLDQLPTAAADAFTLSALPTVLLYFAGYLLLCQGVRAAWRASR
Ga0311372_105379224	3300030520	Palsa	MPAPNRSSILICTALAVATPLLAGRMAWRLLDDDRRSGVAYVLLYWPSILIDSLPTRFAEGFTRSALPTVLLYFGGYLLLSQGVRAGWRRWR
Ga0311372_126067811	3300030520	Palsa	RLGILLSAALAVATPLLAGSMAWRLLDDDRRTGVVYVLLYWPSILIDCMPPRFAEGFTRSALPTVLLYFGGYLLLCQAARAVWRRVR
Ga0307511_102119102	3300030521	Ectomycorrhiza	MPAPTRTSILVSAALAVASPLVAGAQAWRLVDEEPRSGALYVLMYWPSLLLDQLPPRAAEAFTLSALPTVLLYFAGYLALCEGVRALWRRIRSIGVEKRIAP
Ga0302316_103291442	3300030646	Palsa	ALAVATPLLAGAMAWRLVDEEPRSGAGYLLLYWPSLLLEQLPARAAEAFQLSALPTVLLYFAGYLLLCQLARSLWRRIR
Ga0302309_102765892	3300030687	Palsa	MPAPNRLSILMSAALAVATPLLAGAMAWRLVDEEPRSGAGYLLLYWPSLLLEQLPARAAEAFQLSALSTVLLYFAGYLLLCQLARSLWRRIR
Ga0311335_109261222	3300030838	Fen	MPASNRPSILISAALAVATPLLAGASAWHYLDDDRRTGLIYVLLYWPSILIDALPPRAAEAFTLSALPTVLLYFGGYLLLCQAARAVWRRLR
Ga0302323_1020567482	3300031232	Fen	SGASQWRRMRAPNRLSILVSAALAVATPLLAGAMAWRLLDDDGRSGLVYVLVYWPSILLDQLPPAAADAFTLSALPTVLIYFAGYLLLCLGVRSLWRRAR
Ga0302323_1021310021	3300031232	Fen	LSAASAIATPLLGGSMAWRQLDDDRRGGLVDALVYWPSILIDHLPAAAAEAFTRSALPTVLLYFAGYLLLCQAVRAVWRAWR
Ga0302323_1033176792	3300031232	Fen	MPAPNRLSILVSAALAVATPLLAGAMAWRLLDDDGRSGLVYVLVYWPSILLDHLPPAAAEAFTLSALPTVLLYFA
Ga0265330_104820851	3300031235	Rhizosphere	MAAPNRLCILISAALAVATPLLSGTRAWSLVDEEPRSGVLYVLLFWPSILLDHLPAAAAAAFTLSALPTVLLYFAGYLLLCQGARALWRRVR
Ga0311364_123083371	3300031521	Fen	PSKTQANGPARPRAGPFPFGAPPGAPGRAGASQWRRMPAPNRLSILVSAALAVATPLVAGAMAWRLLDEDGRSGLVYVLVYWPSILLDHLPPAAAEAFTLSALPTVLLYFAGYLLLCQAVRSLWRRAR
Ga0318515_100291905	3300031572	Soil	MPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGVGVQTLWRRLR
Ga0307516_100294196	3300031730	Ectomycorrhiza	MAAPNRLSILISAALAVATPLLAGAMAWHYLDDDRRSGLIYVLVYWPSILLDRLPERAAEAFTLSALPTVLLYFAGYLLLCQVARALWRRIAG
Ga0318554_104555771	3300031765	Soil	MPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGLGLQTLWRR
Ga0318521_100630824	3300031770	Soil	VASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGVGVQTLWRRLR
Ga0318548_101075441	3300031793	Soil	MPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALG
Ga0310917_111743341	3300031833	Soil	RHDPSQWRRMPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGVGVQTLWRRLR
Ga0318517_103717851	3300031835	Soil	MPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGVGVQTLWR
Ga0306919_102787661	3300031879	Soil	LTVLTCAALAVASPLVAGAQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGVGVQTLWRRLR
Ga0306925_101354421	3300031890	Soil	RRPGSRHDPSQWRRMPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGVGVQTLWRRLR
Ga0302322_1001574321	3300031902	Fen	FGAQPGAPGRAGASQWRRMPAPNRLSILVSAALAVATPLLAGAMAWRLLDDDGRSGLVYVLVYWPSILLDHLPPAAAEAFTLSALPTVLLYFAGYLLLCQAVRSLWRRAR
Ga0311367_107579491	3300031918	Fen	RAGARRAQRLRSWPAGAPQWRRMPAPNRLSILISAALAAATPLLAGAMAWRLLDDGGRSGLVYLLVYWPSILLDHLPAAAADAFTLSALPTVLLYFAGYLVLCQGVRSAWRCMR
Ga0311367_123747371	3300031918	Fen	MPAPNRLSILVSAALAVATPLLAGAMAWRLLDDDGRSGLVYGLVYWPSILLDHLPPAAAEAFTLSALPTVLIYFAGYLALCQLVRSMWRRAR
Ga0308175_1017068282	3300031938	Soil	MPVPNRPSILVSAALAVATPLLAGANAWRLVDEDRPRGAADLLLYWPSFLLDQLPPRAADAFQRSALPTVLLYFGGYLLLCQLARTLWRLIR
Ga0310910_115004992	3300031946	Soil	MPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDALPPRAAEAFTLSALPTVLLYFGGYLALGLGLQTL
Ga0306926_100336974	3300031954	Soil	MPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPRILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGVGVQTLWRRLR
Ga0310911_100157856	3300032035	Soil	PGSRHDPSQWRRMPAPSRLTVLTCAALAVASPLVAGSQAWRLVDEEPRSGALYLLLYWPSILIDQLPPRAAEAFTLSALPTVLLYFGGYLALGVGVQTLWRRLR
Ga0308173_100187521	3300032074	Soil	MSAPNRLSVLISAALAVATPLVAGARAWRLVGAEPGSGVLHVLLYWPSLLLDRLPARANEVLTLSALPTVLVYFGGYLLACHGARALWRRLR
Ga0308173_120635502	3300032074	Soil	MPVPNRPSILVSAALAVATPLLAGANAWRLVDEDRPRGAADLLLYWPSFLLDQLPPRAADAFQRSALPTVLLYFGGYLLLCQLART
Ga0370487_0004029_911_1189	3300034170	Untreated Peat Soil	MPAPNRLSILISAALAVATPLLAGSMAWRLLDDDRRSGLIYVLVYWPSILLDRLPAAAAEAFTLSALPTVLLYFAGYLLLCQGVRALWRRRR
Ga0370487_0009887_760_1038	3300034170	Untreated Peat Soil	MPAPNRLDILISAALAVATPLLAGSMAWRLLDDDRRSGAVYVLVYWPSIVLDHLPAAAAEAFTLSALPTVLLYFAGYLLLCQGLRALWRRRR
Ga0370487_0328150_210_488	3300034170	Untreated Peat Soil	MAAPDRPSILISAALAVCTPFLGGAMAWRLLDDDGRTGLVYVLVYWPSILLDALPAVVADAFTVSALPTVLLYFAGYLLLFRALRATWRGLR
Ga0370481_0282460_50_328	3300034281	Untreated Peat Soil	MAASPRLDILISAALAVATPLLAGTRAWRLLDEQAHPGPLDVLLFWPSLLIDQLPARAAEAFTLSALPTVLLYFGGYLLLCQGARALWRRAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067349

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences