Metagenome / Metatranscriptome Family F067142

Basic Information
Family ID	F067142
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	76 residues
Representative Sequence	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLNRVGRNSNQSAGDRSTA
Number of Associated Samples	103
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.98 %
% of genes near scaffold ends (potentially truncated)	15.87 %
% of genes from short scaffolds (< 2000 bps)	60.32 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (93.651 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.746 % of family members)
Environment Ontology (ENVO)	Unclassified (52.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.333 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1P1_DRAFT_00614720 2P3_DRAFT_01679930 3A2_c1_01053090 4A5_c1_01546590 5P1_C_01204450 6P1_C_00478390 7A_all_C_00588670 8A_all_C_01703420 9L02_03211590 10AL20A1W_11219321 11AL16A1W_101322571 12A30PFW6_10334157 13P5cmW16_10517622 14Ga0062595_1019183971 15Ga0066677_102058062 16Ga0065712_100321222 17Ga0065715_102160631 18Ga0070708_1000338035 19Ga0070699_1010602811 20Ga0070684_1007779732 21Ga0070695_1000755701 22Ga0070696_1019128152 23Ga0066795_100195332 24Ga0066795_100351131 25Ga0066794_100296593 26Ga0070715_107772211 27Ga0066797_10854432 28Ga0099793_102382422 29Ga0099795_102320492 30Ga0099795_106481751 31Ga0104324_1182162 32Ga0104325_1037122 33Ga0099829_100350414 34Ga0099827_115562041 35Ga0099792_105005222 36Ga0099792_108030322 37Ga0105241_109447432 38Ga0099796_102443712 39Ga0105239_105592131 40Ga0137393_109176982 41Ga0137463_10417453 42Ga0137463_11658582 43Ga0120164_10054784 44Ga0120114_10032304 45Ga0120161_10210843 46Ga0120118_11653851 47Ga0137364_100011854 48Ga0137383_100417652 49Ga0137382_104045771 50Ga0137363_102181112 51Ga0137362_101116083 52Ga0137376_1000337512 53Ga0137377_101927672 54Ga0137370_100053795 55Ga0137384_112819722 56Ga0137361_114772592 57Ga0137398_108254532 58Ga0137395_100200492 59Ga0137394_104223581 60Ga0137413_112734761 61Ga0137419_118777281 62Ga0120123_10485091 63Ga0120132_10073142 64Ga0167634_10348212 65Ga0167646_10017489 66Ga0167646_10049787 67Ga0184604_101461092 68Ga0184618_101962392 69Ga0193744_10045444 70Ga0193744_10432341 71Ga0193722_10013578 72Ga0193722_10157641 73Ga0193723_10154403 74Ga0193712_10902151 75Ga0193712_10996852 76Ga0193707_10063013 77Ga0193707_11017232 78Ga0193725_10445161 79Ga0193727_100108710 80Ga0193727_10249533 81Ga0193727_10253544 82Ga0193727_11791041 83Ga0193729_10124993 84Ga0193729_10268391 85Ga0193729_11466762 86Ga0193751_10122802 87Ga0193728_100199110 88Ga0193728_10676103 89Ga0193735_10134055 90Ga0193726_10054174 91Ga0193733_11940282 92Ga0193745_10098471 93Ga0193745_10918092 94Ga0193716_10121573 95Ga0206356_111227592 96Ga0193699_100107265 97Ga0193699_100252174 98Ga0193699_100867402 99Ga0193699_100930893 100Ga0193699_103944641 101Ga0193709_10963762 102Ga0233357_10403302 103Ga0247676_10623392 104Ga0247670_10444592 105Ga0207653_103381352 106Ga0207684_104265952 107Ga0207654_105637451 108Ga0207707_102187342 109Ga0209880_10163492 110Ga0209881_10769181 111Ga0209027_11453422 112Ga0209131_10569973 113Ga0209805_14406241 114Ga0209219_10173252 115Ga0209009_10264542 116Ga0209180_102867202 117Ga0209488_100110857 118Ga0209526_100695453 119Ga0137415_100037214 120Ga0307280_100253584 121Ga0307280_100750382 122Ga0307284_100615812 123Ga0307312_102493132 124Ga0307468_1012954022 125Ga0310810_100147067 126Ga0310811_100785925
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1P1_DRAFT_00614720 2A2_c1_01053090 3A5_c1_01546590 4A_all_C_01703420 5L02_03211590 6Ga0066677_102058062 7Ga0099829_100350414 8Ga0099792_105005222 9Ga0120164_10054784 10Ga0137364_100011854 11Ga0137377_101927672 12Ga0167646_10049787 13Ga0184604_101461092 14Ga0193744_10045444 15Ga0193712_10902151 16Ga0193725_10445161 17Ga0193699_100252174 18Ga0193699_103944641 19Ga0209881_10769181 20Ga0209027_11453422 21Ga0307280_100253584
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1Ga0137383_100417652 2A2_c1_01053090 3A_all_C_01703420 4L02_03211590 5Ga0062595_1019183971 6Ga0066677_102058062 7Ga0066794_100296593 8Ga0066797_10854432 9Ga0099795_102320492 10Ga0099795_106481751 11Ga0137463_10417453 12Ga0120161_10210843 13Ga0137377_101927672 14Ga0137370_100053795 15Ga0120123_10485091 16Ga0120132_10073142 17Ga0167646_10017489 18Ga0167646_10049787 19Ga0184604_101461092 20Ga0193744_10045444 21Ga0193727_10253544 22Ga0193727_11791041 23Ga0193751_10122802 24Ga0193726_10054174 25Ga0193716_10121573 26Ga0193699_100252174 27Ga0193699_103944641 28Ga0207653_103381352 29Ga0209880_10163492 30Ga0209027_11453422 31Ga0209219_10173252 32Ga0209526_100695453 33Ga0307468_1012954022 34Ga0310811_100785925
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.22% β-sheet: 0.00% Coil/Unstructured: 35.78%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF12680	SnoaL_2	14.29
PF01408	GFO_IDH_MocA	11.90
PF02639	DUF188	7.14
PF13637	Ank_4	4.76
PF01261	AP_endonuc_2	4.76
PF01872	RibD_C	4.76
PF13302	Acetyltransf_3	2.38
PF06439	3keto-disac_hyd	0.79
PF01906	YbjQ_1	0.79
PF02894	GFO_IDH_MocA_C	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1671	Uncharacterized conserved protein YaiI, UPF0178 family	Function unknown [S]	7.14
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	4.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	4.76
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.79
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.79
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.79
COG2067	Long-chain fatty acid transport protein	Lipid transport and metabolism [I]	0.79
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.79
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.65 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.65 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.65 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.38 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	28.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.97 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	28.57 %
Unclassified	root	N/A	6.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	3.17 %
Unclassified	root	N/A	6.35 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	25.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3.17 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.40 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3.17 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.40 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.40 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.38 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.40 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.38 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Unclassified	root	N/A	6.35 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_88109_len_2972_cov_11_983850	All Organisms → cellular organisms → Bacteria	3022	Open in IMG/M
2088090008\|P3_DRAFT_NODE_206780_len_2995_cov_17_761602	All Organisms → cellular organisms → Bacteria	3045	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig22810	All Organisms → cellular organisms → Bacteria	2656	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig70839	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
2140918006\|ConsensusfromContig50613	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
2140918006\|ConsensusfromContig90301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
2140918007\|ConsensusfromContig12250	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
2140918007\|ConsensusfromContig160054	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
2170459007\|GJ61VE201CMVCP	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300000880\|AL20A1W_1121932	All Organisms → cellular organisms → Bacteria	6333	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.03%
Host-Associated	Host-Associated	3.97%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.17%
Plants	Host-Associated → Plants	3.97%
Terrestrial	Environmental → Terrestrial	92.86%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.38%
Sediment	Environmental → Aquatic → Sediment	3.17%
Soil	Environmental → Terrestrial → Soil	92.86%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	10.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.29%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.59%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.38%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.38%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	7.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	6.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.43%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00614720	2088090004	Soil	MRSGFAAGLMGIGGILISFGTVIVVLAFLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA
P3_DRAFT_01679930	2088090008	Soil	MRSGFAAGLMGIGGILISFGTVIVVLALLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGRNSDQSARSERGSA
A2_c1_01053090	2124908043	Soil	MRSGLAAALMGIGGIFMSFGTVIVVLALFARHDNVRAELPTMTTVAAGSIVVGAVMFGAGYLLGRMGRPASDSTRADRSAA
A5_c1_01546590	2124908044	Soil	MGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA
P1_C_01204450	2140918006	Soil	MGIGGILISFGTVIVVLAFLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA
P1_C_00478390	2140918006	Soil	MRSGFAASLMGIGGILMSFGAVIVVLVLLARRGDPHTRSPSMITVATGSLVVGAVLFGAGYLLGRLGRNSDQSARSERGTA
A_all_C_00588670	2140918007	Soil	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA
A_all_C_01703420	2140918007	Soil	GIGGILMSFGAVIVVLALLARQADTRTELPTMITVAAGSLVVGAVLFGAGYLLGRLGRNSDQEESLISP
L02_03211590	2170459007	Grass Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARTGDTRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRVGRDSDRSLDSARTS
AL20A1W_11219321	3300000880	Permafrost	RSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA*
AL16A1W_101322571	3300000887	Permafrost	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTN*
A30PFW6_10334157	3300001361	Permafrost	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA*
P5cmW16_10517622	3300001664	Permafrost	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAGGSLIVGALMFGAGYLLGRIGRNSERPVSP*
Ga0062595_1019183971	3300004479	Soil	MRSGLAAALMGIGGILVSFGAVIVVLVLLARSGDTRGQLPAMTSVAVASLVIGAVMFGAGYLLGRVGRDSNRSLDSARTS*
Ga0066677_102058062	3300005171	Soil	MRSGLAAALMGIGGILLSFGTVILVLTIFARANDWRVQLPAMGSVATGSLVIGGVMFALGFLLGRVGRRADARSY*
Ga0065712_100321222	3300005290	Miscanthus Rhizosphere	MRSGIAATLMGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNS
Ga0065715_102160631	3300005293	Miscanthus Rhizosphere	MRSGIAATLMGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD*
Ga0070708_1000338035	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGIGGILLSFGAVIVVLAFFARQGGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSDQSAGDRSTA*
Ga0070699_1010602811	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGFAAGLMGIGGILASFGAVIVVLAFFARQGGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSDQSAGDRSTA*
Ga0070684_1007779732	3300005535	Corn Rhizosphere	MRSGIAATLMGFGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD*
Ga0070695_1000755701	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD*
Ga0070696_1019128152	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGLAAALMGIGGILLSFGAVIVVLALFARSGDTRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRVGRNSEASLTP*
Ga0066795_100195332	3300005938	Soil	MRSGFAAILMGIGGILMSFGTVIVVLALLARRGDPHTQSPAMMTVATGSLVVGAVLFGAGYLLGRVGRNSDQSARSERGTA*
Ga0066795_100351131	3300005938	Soil	MRSGFAAGLMGIGGILISFGTVIVVLALLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA*
Ga0066794_100296593	3300005947	Soil	MRSGFAAGLMGIGGILISFGTVIVVLAFLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA*
Ga0070715_107772211	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGLAATLMGIGGILLSFGAVIVVLAFFARTGDTRGQLPAMTTAALGSLIVGAVMFGAGYLLGRVGRDSDRSLDSSR
Ga0066797_10854432	3300006864	Soil	MRSGLAASLMGIGGILMSFGAVIVVLVLLARRGDPHSRSPSMIAVATGSLVVGAVLFGAGYLLGRLGRNSDQSARSERGTA*
Ga0099793_102382422	3300007258	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNRSAGDRSTA*
Ga0099795_102320492	3300007788	Vadose Zone Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGALLIGAVMFGAGYLLSRVGRNSDQSLDSARTG*
Ga0099795_106481751	3300007788	Vadose Zone Soil	LRTLKEDQMRSGLAAALMGIGGILVSFGAVIVVLALLARNGDTRGQLPAMTTVAVGSLLTEAVMFGAGYLLGRVGRDSDGSLDSARTG*
Ga0104324_1182162	3300007820	Soil	MRSGFAAGLMGIGGILISFGTVIVVLAFLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGRNSDQSARSERGSA*
Ga0104325_1037122	3300007822	Soil	MRSGFAAGLMGIGGILISFGTVIVVLAFLGRRGDTRPELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA*
Ga0099829_100350414	3300009038	Vadose Zone Soil	MRSGFSAGLMGIGGILLSFGAVIVVLAFFARQAGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0099827_115562041	3300009090	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGSGETRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0099792_105005222	3300009143	Vadose Zone Soil	VSFGAVIVVLALLARNGDTRGQLPAMTTVAVGSLLIGAIMFGAGYLLSRVGRNSDQSLDSARTG*
Ga0099792_108030322	3300009143	Vadose Zone Soil	MRSGLAAALMGIGGILMSFGAVIVVLALLARNGDTRGQLQAMTTVAVGSLLIGAVMFGAGYLLSRVGRNSDQSLDSARTG*
Ga0105241_109447432	3300009174	Corn Rhizosphere	VIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD*
Ga0099796_102443712	3300010159	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNQSAGDRSTA*
Ga0105239_105592131	3300010375	Corn Rhizosphere	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDQTLDSARTG*
Ga0137393_109176982	3300011271	Vadose Zone Soil	MRSGFSAGLMGIGGILLSFGAVIVVLAFFARQGGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0137463_10417453	3300011444	Soil	MRSGLAAGLMGIGGILISFGAVIVVLAFFARQGGETRLQLPAMTTVAVGSLVVGAVMFGAGYLLGRVGRQTDQSAGDRSAA*
Ga0137463_11658582	3300011444	Soil	MRSGFAAGLMGIGGILLSFGSVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFGAGFLLARLGGNSNQSGDRSTA*
Ga0120164_10054784	3300011987	Permafrost	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLL*
Ga0120114_10032304	3300011998	Permafrost	MRSGFAAGLMGIGGILLSFGSVIVVLAFFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARLGGNSNQSGDRSTA*
Ga0120161_10210843	3300012005	Permafrost	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRRTN*
Ga0120118_11653851	3300012010	Permafrost	MRSGFVAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARLGGNSNQSAGDRSNA*
Ga0137364_100011854	3300012198	Vadose Zone Soil	MRAGIAAMLMGIGGILITFGTVVIVLSFFARQGDTRLELPAMATLATGALVVGAVMLGAGFLLGRVGRSSPPIRNS*
Ga0137383_100417652	3300012199	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLNRVGRNSNQSAGDRSTA*
Ga0137382_104045771	3300012200	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGALVVGAVM
Ga0137363_102181112	3300012202	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNRSAGDRSTA*
Ga0137362_101116083	3300012205	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGSGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0137376_1000337512	3300012208	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNQSAGDRTTA*
Ga0137377_101927672	3300012211	Vadose Zone Soil	MRSGLVAGLMGIGGILIAFGAVIVVLAIFARQGETRHQLPAMTTLAVGSIVVGAVMFAAGFLLSRIGGGSDDSSGAALNRT*
Ga0137370_100053795	3300012285	Vadose Zone Soil	MRAGIAAMLMGIGGILITFGAVVIVLSFFARQGDTRLELPAMATLATGALVVGAVMLGAGFLLGRVGRSSPPIRNS*
Ga0137384_112819722	3300012357	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLNRVGRNSNQSAGDRS
Ga0137361_114772592	3300012362	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNRSAGDRSTA*
Ga0137398_108254532	3300012683	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPEMTTVALGSLVVGAVMFGAGFLLSRVG
Ga0137395_100200492	3300012917	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPEMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0137394_104223581	3300012922	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGA
Ga0137413_112734761	3300012924	Vadose Zone Soil	MRSGLAAALKGIGGILMSFGAVIVVLALFARNGDTGGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSDQSLDSARTG*
Ga0137419_118777281	3300012925	Vadose Zone Soil	MRSGLVAALMGIGGILLSFGAVIVVIALFARQGEWRHELPAMTTVAVGSLVIGGVMFGAG
Ga0120123_10485091	3300013770	Permafrost	MRSGLAAALMGIGGILMSFGAVIVVLALFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARLGGNSNQSGDRSTA*
Ga0120132_10073142	3300013832	Permafrost	MRSGFAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAGGSLIVGALMFGAGYLLGRIGRNSERPVSP*
Ga0167634_10348212	3300015090	Glacier Forefield Soil	MGIGGILMSFGAVIVVLALFAREGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA*
Ga0167646_10017489	3300015192	Glacier Forefield Soil	MRSGFAAGLMGIGGILLSFGTVIVVLSFFARHGGDTRSELPAMTTAAAGSLVVGAVLFGAGYLLGRLGRNSDQSARDRSTA*
Ga0167646_10049787	3300015192	Glacier Forefield Soil	MRSGFSAGLMGIGGILISFGTVIFVLALFARQGDTRGELPAMTMLATGSILVGAVLFGAGYLLGRIGRAPASP*
Ga0184604_101461092	3300018000	Groundwater Sediment	MRSGLAAGLMGIGWILISFGAVIAVLYVFARQGGDTLSELPAMATGAVASLVVGAVMFVVGYLLSRMGRSSDRRPDGSIA
Ga0184618_101962392	3300018071	Groundwater Sediment	MRSGFAAGLMGIGGILLSFGAVIVILAFFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARL
Ga0193744_10045444	3300019874	Soil	MGVGGILVSFGAVIVVLALFARQGDTSIELPAMTTVLTGSIVVGVVMFGAGYLLGRIGRSADSKQPERGAA
Ga0193744_10432341	3300019874	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARIGDTRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRTGRDSNRSLDSARTG
Ga0193722_10013578	3300019877	Soil	MGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNPSLDSARSG
Ga0193722_10157641	3300019877	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFG
Ga0193723_10154403	3300019879	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFGAGFLLARLGGNSNQSGDRSTA
Ga0193712_10902151	3300019880	Soil	MRSAISAGLMGVGGILVSFGAVIVVLSLFARQGETRIELPAMTTVLTGSIVVGAVMFGAGYV
Ga0193712_10996852	3300019880	Soil	GSGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNQSLDSARTG
Ga0193707_10063013	3300019881	Soil	MRSGLAAGLMGIGGILMSFGAVIVVLAFFARQGGETREQLPAMTTLAVGSLVVGAVLFGAGYLLGRVGRNSAQSAGDRSTA
Ga0193707_11017232	3300019881	Soil	MGVGGILVSFGAVIVVLSLFARQGETRIELPAMTTVLTGSIVVGAVMFGAGYLLGRIGRSSDKSKQPERGTA
Ga0193725_10445161	3300019883	Soil	MLTWCATTRYDYNSGLRKINEDPMRSGLAAALMGIGGILVSFGAVIVVLALFARHGDVRGQLPAMTTVAAGSLVVGAVMFAAGYLLGRMGR
Ga0193727_100108710	3300019886	Soil	MSFGAVIVVLALFARHGDVRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRVGRNSEASLTP
Ga0193727_10249533	3300019886	Soil	MGVGGILISFGAVIVVLSLFARQGDTRIELPAMTTVMTGSIVVGVVMFGAGYLLGRIGRSADQSKQPERGTA
Ga0193727_10253544	3300019886	Soil	MRSGISAGLMGVGGILVSFGAVIVVLSLFARQGETRIELPAMTTVLTGSIVIGVVMLGAGYILGRIGRGSDQSKQQERGTA
Ga0193727_11791041	3300019886	Soil	MRSGISAGLMGVGGILVSFGAVIVVLSLFARQGETRIELPAMTTVMTGSIVVGAVMFGAGYLLGRIGRSSGQSKQPERGAA
Ga0193729_10124993	3300019887	Soil	MRSGFAAGLMGIGGILLSFGAVIVILAFFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARLGGNSNQSGDRSTA
Ga0193729_10268391	3300019887	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNQSLDSARTG
Ga0193729_11466762	3300019887	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAIFAREGGATRLQLPEMTTVALGSLVVGAVMFGAGFLLSRVGGNSNQSASDRSTA
Ga0193751_10122802	3300019888	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAIFAREGGATRLQLPEMTTVALGSLVVGAVMFGAGFLLSRVGGNSDQCRPVEARP
Ga0193728_100199110	3300019890	Soil	MGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNQSLDSARTG
Ga0193728_10676103	3300019890	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFGAGFLLARLGGNSNQSGDRSTV
Ga0193735_10134055	3300020006	Soil	MGIGGILLSFGAVIVVLALFARNGETRGELPAMTTAAVGSLVIGAVMFGAGYLLGRVGRNSDRSLDSARTG
Ga0193726_10054174	3300020021	Soil	MRSGISAGLMGVGGILISFGAVIIVLSLFARQGDTRIELPAMTTLLTASIVVGAVMFGAGYLLGRIGRSAVTP
Ga0193733_11940282	3300020022	Soil	MGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLIVGAVMFGAGFLLSRVGGNSNQSAGDRSTA
Ga0193745_10098471	3300020059	Soil	MGIGGILMSFGAVIVVLALFARIGDTRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRTGRDSNRSLDSARTG
Ga0193745_10918092	3300020059	Soil	FAAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFGAGFLLARLGGNSNQSGDRSTA
Ga0193716_10121573	3300020061	Soil	MRSGLAAALMGIGGIFVSFGAVIAVLVLFARYDNVRGELPAMTTMSTASIVVGAVMFGAGYLLNRMGRSNSAREDRSAA
Ga0206356_111227592	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	IVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0193699_100107265	3300021363	Soil	MGIGGILMSFGAVIVVLALFARNSDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNQSLDSARTG
Ga0193699_100252174	3300021363	Soil	MRSGLTAALMGIGGIFVSFGAVIVVLSLFARQGETRGELPAMTTLATISIVGGAVLFGAGYLLGRVGRNSNQSDRPERTA
Ga0193699_100867402	3300021363	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSDRAPISP
Ga0193699_100930893	3300021363	Soil	GGILVSFGAVIVVLSLFARQGETRIELPAMTTVLTGSIVVGAVMFGAGYLLGRIGRSSDKSKQPERGTA
Ga0193699_103944641	3300021363	Soil	MRSGLIAGLMGIGGIFVSFGAVIVVLAIFTRQSEWRHELPTMTTVAVGSIVIGAVMFGAGFLLSR
Ga0193709_10963762	3300021411	Soil	MGIGGIFVSFGAVIVVLSLFARQGETGGELPAMTTLATISIVGGAVLFGAGYLLGRVGRNSNQSDRPERTA
Ga0233357_10403302	3300023056	Soil	MGIGGILLSFGVVIVVLALFARQGGGDTRLQLPAMTKVALGSLVVGGVMFGAGFLLNRIGGNSNQSSSDRSAA
Ga0247676_10623392	3300024249	Soil	LSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0247670_10444592	3300024283	Soil	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0207653_103381352	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGIAATLMGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0207684_104265952	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGIGGILLSFGAVIVVLAFFARQGGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSDQSAGDRSTA
Ga0207654_105637451	3300025911	Corn Rhizosphere	FGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0207707_102187342	3300025912	Corn Rhizosphere	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDQTLDSARTG
Ga0209880_10163492	3300026271	Soil	MRSGFAAILMGIGGILMSFGTVIVVLALLARRGDPHTQSPAMMTVATGSLVVGAVLFGAGYLLGRVGRNSDQSARSERGTA
Ga0209881_10769181	3300026273	Soil	MGIGGILMSFGAVIVVLVLLARRGDPHSRSPSMIAVATGSLVVGAVLFGAGYLLGRLGRNSDQSARSERGTA
Ga0209027_11453422	3300026300	Grasslands Soil	LAFGTVVVVLALFARNGDTRLQLPAMGTVATGSLVIGAAMFGAGFLLGRIGRDSSPSTPVRNS
Ga0209131_10569973	3300026320	Grasslands Soil	MGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNRSAGDRSTA
Ga0209805_14406241	3300026542	Soil	EELMRSGLAAALMGIGGILLSFGTVILVLTIFARANDWRVQLPAMGSVATGSLVIGGVMFALGFLLGRVGRRADARSY
Ga0209219_10173252	3300027565	Forest Soil	MRSGLAAGLMGIGGILLSFGAVIVVLALFARQGGGDTRLQLPAMTKVALGSLVVGGVMFGAGFLLNRIGGNSNQSSSDRSAA
Ga0209009_10264542	3300027667	Forest Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFLAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNQSAGDSGTA
Ga0209180_102867202	3300027846	Vadose Zone Soil	MRSGFSAGLMGIGGILLSFGAVIVVLAFFARQAGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA
Ga0209488_100110857	3300027903	Vadose Zone Soil	MGIGGILMSFGAVIVVLALLARNGDTRGQLQAMTTVAVGSLLIGAVMFGAGYLLSRVGRNSDQSLDSARTG
Ga0209526_100695453	3300028047	Forest Soil	MRSGFVAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVAVGSLVVGAVMFGAGFLLARLGGNSNQSARDRNTA
Ga0137415_100037214	3300028536	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNRSAGDRSTA
Ga0307280_100253584	3300028768	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIG
Ga0307280_100750382	3300028768	Soil	LAAALMGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNPSLDSARSG
Ga0307284_100615812	3300028799	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNPSLDSARTG
Ga0307312_102493132	3300028828	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNPSLDSARSG
Ga0307468_1012954022	3300031740	Hardwood Forest Soil	MRSGLAATLMGIGGILLSFGAVIVVLALFARTGDTRGQLPAMTAAAVVSLVGGAVMFGAGYLLGRAGRSSDRSLDSARTG
Ga0310810_100147067	3300033412	Soil	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVASLIIGAVMFGAGYLLGRVGRDSDRSLDSARTG
Ga0310811_100785925	3300033475	Soil	MRSGLAATLMGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVASLIIGAVMFGAGYLLGRVGRDSDRSLDSARTG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067142

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences