Metagenome / Metatranscriptome Family F067141

Basic Information
Family ID	F067141
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	60 residues
Representative Sequence	CMLADAAAAGVQACLPKPDGFGMALHYLQRVPGVRGGVVVVGDRIGVAGAVEIAG
Number of Associated Samples	114
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.63 %
% of genes near scaffold ends (potentially truncated)	92.06 %
% of genes from short scaffolds (< 2000 bps)	89.68 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (96.825 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (24.603 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.095 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98. 1Perma_A_C_04343260 2JGI10213J12805_109517721 3JGI10214J12806_121286871 4JGI10214J12806_126503281 5JGI11615J12901_117915921 6JGI10216J12902_1035913603 7JGIcombinedJ13530_1070075871 8C688J18823_108490252 9C687J35503_101152611 10JGI25406J46586_101769052 11Ga0055472_100913252 12Ga0055440_102143322 13Ga0063454_1000748064 14Ga0062590_1007313662 15Ga0062590_1014269201 16Ga0062592_1007894731 17Ga0068997_101570861 18Ga0066388_1016630481 19Ga0068869_1014257752 20Ga0070689_1003487571 21Ga0070687_1005673491 22Ga0070692_108806482 23Ga0068867_1007746361 24Ga0070699_1005086611 25Ga0070696_1002532992 26Ga0066905_1000640623 27Ga0068866_106658712 28Ga0070715_107833862 29Ga0066653_101381041 30Ga0073934_108316492 31Ga0066710_1008496012 32Ga0099827_116339561 33Ga0115026_112238542 34Ga0114129_123564411 35Ga0111538_135068001 36Ga0105070_10023443 37Ga0126313_113392612 38Ga0126312_105886851 39Ga0126310_106627231 40Ga0126311_103473661 41Ga0134080_104938102 42Ga0137430_12538041 43Ga0137381_113279651 44Ga0137371_100601463 45Ga0164301_101687742 46Ga0164301_116693362 47Ga0164302_117490531 48Ga0164308_111742132 49Ga0157378_109306281 50Ga0134075_102298501 51Ga0075326_10540582 52Ga0134072_104849452 53Ga0132257_1006395031 54Ga0187776_111121832 55Ga0187788_102221571 56Ga0184616_100747462 57Ga0187765_100537362 58Ga0184619_100691551 59Ga0184625_104881382 60Ga0184625_104939781 61Ga0187774_103739001 62Ga0190265_109700252 63Ga0190268_112076282 64Ga0190268_113135171 65Ga0190268_120653062 66Ga0190270_114289202 67Ga0190270_119954192 68Ga0190270_126473591 69Ga0066669_105353961 70Ga0190264_108166541 71Ga0193696_11315302 72Ga0196980_10524492 73Ga0196959_100626432 74Ga0210334_102835171 75Ga0224512_103217211 76Ga0209322_101136521 77Ga0209619_101170622 78Ga0209324_107540111 79Ga0209341_102288632 80Ga0210143_10378632 81Ga0207692_101231562 82Ga0207670_105753241 83Ga0207689_108614121 84Ga0207689_113655362 85Ga0208287_10011473 86Ga0207708_105618402 87Ga0207648_101241721 88Ga0209159_11179231 89Ga0209286_12975832 90Ga0233416_103242461 91Ga0209253_106725752 92Ga0233417_100751211 93Ga0272482_102676772 94Ga0307293_101019792 95Ga0307307_103125452 96Ga0307315_101779361 97Ga0307319_101989702 98Ga0307290_100682282 99Ga0307290_103887302 100Ga0307299_100177993 101Ga0307284_101720361 102Ga0307292_104434191 103Ga0307308_103050362 104Ga0307304_101279272 105Ga0307304_105270361 106Ga0299907_101933052 107Ga0302299_104233562 108Ga0308187_102730991 109Ga0307498_101409221 110Ga0247727_100022501 111Ga0302322_1037819382 112Ga0310900_107460481 113Ga0315294_108451811 114Ga0310899_102116141 115Ga0307415_1005132432 116Ga0315281_101102751 117Ga0315273_110429752 118Ga0335081_116536732 119Ga0214472_100899411 120Ga0214472_104773191 121Ga0316622_1031796151 122Ga0316600_108085451 123Ga0247829_104523322 124Ga0364931_0258581_330_572 125Ga0364932_0405996_227_451 126Ga0373905_072692_38_238
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98. 1Perma_A_C_04343260 2JGI10213J12805_109517721 3JGI10214J12806_121286871 4JGI10214J12806_126503281 5JGIcombinedJ13530_1070075871 6C688J18823_108490252 7C687J35503_101152611 8Ga0055472_100913252 9Ga0055440_102143322 10Ga0068997_101570861 11Ga0070696_1002532992 12Ga0066905_1000640623 13Ga0068866_106658712 14Ga0066653_101381041 15Ga0073934_108316492 16Ga0066710_1008496012 17Ga0099827_116339561 18Ga0105070_10023443 19Ga0137430_12538041 20Ga0137371_100601463 21Ga0164301_116693362 22Ga0157378_109306281 23Ga0075326_10540582 24Ga0134072_104849452 25Ga0187788_102221571 26Ga0190268_112076282 27Ga0190268_113135171 28Ga0190268_120653062 29Ga0190270_126473591 30Ga0224512_103217211 31Ga0209619_101170622 32Ga0209324_107540111 33Ga0233417_100751211 34Ga0315294_108451811 35Ga0214472_100899411 36Ga0214472_104773191 37Ga0364931_0258581_330_572 38Ga0364932_0405996_227_451 39Ga0373905_072692_38_238
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54. 1Ga0066388_1016630481 2Perma_A_C_04343260 3JGIcombinedJ13530_1070075871 4JGI25406J46586_101769052 5Ga0055440_102143322 6Ga0062590_1007313662 7Ga0068997_101570861 8Ga0070687_1005673491 9Ga0070699_1005086611 10Ga0070696_1002532992 11Ga0066905_1000640623 12Ga0073934_108316492 13Ga0099827_116339561 14Ga0105070_10023443 15Ga0126313_113392612 16Ga0137430_12538041 17Ga0137381_113279651 18Ga0137371_100601463 19Ga0164301_101687742 20Ga0164301_116693362 21Ga0157378_109306281 22Ga0134072_104849452 23Ga0184616_100747462 24Ga0187765_100537362 25Ga0184619_100691551 26Ga0184625_104881382 27Ga0187774_103739001 28Ga0190265_109700252 29Ga0190268_120653062 30Ga0190270_114289202 31Ga0190270_126473591 32Ga0196959_100626432 33Ga0210334_102835171 34Ga0224512_103217211 35Ga0209322_101136521 36Ga0209619_101170622 37Ga0209341_102288632 38Ga0210143_10378632 39Ga0208287_10011473 40Ga0209286_12975832 41Ga0233416_103242461 42Ga0209253_106725752 43Ga0233417_100751211 44Ga0307293_101019792 45Ga0307284_101720361 46Ga0307308_103050362 47Ga0302299_104233562 48Ga0315294_108451811 49Ga0310899_102116141 50Ga0335081_116536732 51Ga0214472_100899411 52Ga0214472_104773191 53Ga0316622_1031796151 54Ga0316600_108085451 55Ga0364931_0258581_330_572 56Ga0364932_0405996_227_451 57Ga0373905_072692_38_238
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.92% β-sheet: 14.46% Coil/Unstructured: 56.63%
Feature Viewer
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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SCOP family	SCOP domain	Representative PDB	TM-score
d.96.2.2: DVU1097-like	d2o34a1	2o34	0.68285
d.153.1.1: Class II glutamine amidotransferases	d1ofda3	1ofd	0.68205
d.153.1.1: Class II glutamine amidotransferases	d1gdoa_	1gdo	0.66134
d.127.1.0: automated matches	d3tb5a_	3tb5	0.65967
d.153.1.1: Class II glutamine amidotransferases	d1te5a_	1te5	0.65502

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01653	DNA_ligase_aden	80.95
PF03120	DNA_ligase_OB	8.73
PF14520	HHH_5	3.17
PF12826	HHH_2	1.59
PF00763	THF_DHG_CYH	1.59
PF00398	RrnaAD	0.79
PF11838	ERAP1_C	0.79
PF02882	THF_DHG_CYH_C	0.79
PF02686	Glu-tRNAGln	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	89.68
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	2.38
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.79
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.79
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	0.79

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.14 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.94 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.56 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
Unclassified	root	N/A	3.17 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.92 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.79 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
Unclassified	root	N/A	3.17 %

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300027799\|Ga0233416_10324246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10075121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1393	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig50988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	887	Open in IMG/M
3300000858\|JGI10213J12805_10951772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	639	Open in IMG/M
3300000891\|JGI10214J12806_12128687	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300000891\|JGI10214J12806_12650328	All Organisms → cellular organisms → Bacteria → Terrabacteria group	548	Open in IMG/M
3300000953\|JGI11615J12901_11791592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300000956\|JGI10216J12902_103591360	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300001213\|JGIcombinedJ13530_107007587	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300001686\|C688J18823_10849025	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.79%
Environmental	Environmental	89.68%
Host-Associated	Host-Associated	9.52%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	16.67%
Bioremediation	Engineered → Bioremediation	0.79%
Plants	Host-Associated → Plants	9.52%
Terrestrial	Environmental → Terrestrial	73.02%

Habitat	Taxonomy	Distribution
Cave	Environmental → Terrestrial → Cave	0.79%
Floodplain	Environmental → Terrestrial → Floodplain	1.59%
Freshwater	Environmental → Aquatic → Freshwater	6.35%
Marine	Environmental → Aquatic → Marine	5.56%
Metal	Engineered → Bioremediation → Metal	0.79%
Peat	Environmental → Terrestrial → Peat	1.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.17%
Sediment	Environmental → Aquatic → Sediment	3.97%
Soil	Environmental → Terrestrial → Soil	69.05%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.79%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.79%
Lake	Environmental → Aquatic → Freshwater → Lake	3.97%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.79%
Loam	Environmental → Terrestrial → Soil → Loam	11.90%
Sand	Environmental → Terrestrial → Soil → Sand	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.59%
Sediment	Environmental → Aquatic → Marine → Sediment	0.79%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.97%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.59%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.97%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.79%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.38%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.59%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.59%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.17%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.17%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.59%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.79%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.59%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.38%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.38%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.79%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002530	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_3	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M

Showing 1 to 10 of 114 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_04343260	2124908032	Soil	AQTCMLADAAAAGVQAVLPKPGGFDQALRYLQQVRGVQGGVIVVGDRIGVAGAVEIAE
JGI10213J12805_109517721	3300000858	Soil	TLGRGRGDGPDGLVVIAGTCMLADAAAAGVQACLPKPDGFGMALHYLQRVPGVHGGVVVIGDRIGVSGRVEIAG*
JGI10214J12806_121286871	3300000891	Soil	GGPDGLAVIADSCMAADAAAAGVQALLPKEFGFAQAVRYLKSVPGVRGGVFVVGERIGVAGNLEIAG*
JGI10214J12806_126503281	3300000891	Soil	AGVQACLAKPDGFGMALHYLQQVPGVRGGVVVVGDRIGVAGAVEIAA*
JGI11615J12901_117915921	3300000953	Soil	AAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVVGDRIGVAGAVEIAA*
JGI10216J12902_1035913603	3300000956	Soil	DAAAAGVQACLPKPDGFGMALHYLQKVPGVTGAVVVVGDRIGVAGGVEIAG*
JGIcombinedJ13530_1070075871	3300001213	Wetland	VGVSTTLGRGRVAVDGLAVLAESCMLAEAAAAGVQAILPKPDGFHLSLAYLQKVPGVIGGLVVIGDRIGVAGGVEIAA*
C688J18823_108490252	3300001686	Soil	SCMLADAAAAGVQALLPKENGLASALLYLKKVRGVLGGVIVMGPRIGVAGSVEIAA*
C687J35503_101152611	3300002530	Soil	AAAGVRAILPKPDGFHLALTYLKRVPGVTGGVLVQGERIGVAGGVEIAA*
JGI25406J46586_101769052	3300003203	Tabebuia Heterophylla Rhizosphere	PDGLAVIADTCMAADAAAAGIQALLPKERGFAQAVRYLRDVPNVRGGVFVVGERIGVAGGVEIAG*
Ga0055472_100913252	3300003998	Natural And Restored Wetlands	CMLADAAAAGVQALLPKEDGFKLALRYLQQVPGVRGGVVVVGEEIGVAGGVEIARP*
Ga0055440_102143322	3300004020	Natural And Restored Wetlands	LAVLAESCMLADAAAAGVQAILPKENGFNGALAYLRQVKGVFGGVLLLGERIGVAGSVEIAA*
Ga0063454_1000748064	3300004081	Soil	MSVDRGRATVDGLAVLADSCMLADAAAAGVQALLPKENGLASALLYLKKVRGVLGGVIVMGPRIGVAGSVEIAA*
Ga0062590_1007313662	3300004157	Soil	GGPDGLAVIADSCMAADAAAAGVQALLPKKLGFAQAVRYLKTVPGVRGGVFVLGERIGLAGNLEIAG*
Ga0062590_1014269201	3300004157	Soil	GRGGGGPDGLAVIADSCMEADAAAAGVQALLPKKLGFAQAVRYLKTVPGVRGGVFVLGERIGVAGNLEIAG*
Ga0062592_1007894731	3300004480	Soil	LADAAAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVVGDRIGVAGAVEIAA*
Ga0068997_101570861	3300005204	Natural And Restored Wetlands	CMLADAAAAGVRAILPNERGFDGALAYLRQITGVHGGLVLVGERIGVVGSVEIAA*
Ga0066388_1016630481	3300005332	Tropical Forest Soil	CMLADAAAAGVQACLPKPDGFGMALHYLQRVPGVRGGVVVVGDRIGVAGAVEIAG*
Ga0068869_1014257752	3300005334	Miscanthus Rhizosphere	QSCMLADAAAAGVQACLNKPDGFGMALHYLQRVPGVSGGVVVVGDRIGVAGGVEIAG*
Ga0070689_1003487571	3300005340	Switchgrass Rhizosphere	DAAAAGVQALLPKDDGFKLALRYLQQVPGVRGGVVVVGAEIGVAGGVEIARP*
Ga0070687_1005673491	3300005343	Switchgrass Rhizosphere	CMLADAAAAGVQALLPKEDGFRKALQYLQQVPGVDGGVVVVGERIGVAGAVEIAH*
Ga0070692_108806482	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	AGVQAMLGKDEGFHAALAYLQQVPNVLGGVVVVGERIGVAGAVEIAA*
Ga0068867_1007746361	3300005459	Miscanthus Rhizosphere	SCMLADAAAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVVGDRIGVAGAVEIAA*
Ga0070699_1005086611	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DGLAVLAESCMLAGAAAAGVQAILPKENGLQGAMAYLKQVPGVIGGVVFLGERIGIAGGLELAA*
Ga0070696_1002532992	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GRGRGGEGPDGLAVIAASCMAADAAAAGVQAILPKEDGFHAALRYIERVPGVVGGVIVVGRKMGFAGKVEVAGA*
Ga0066905_1000640623	3300005713	Tropical Forest Soil	DVDGMAVLAESCMLAGAAAAGVQAILQREDGLQTALAYLKKVPGVIGGVVFLGERIGMAGGLELAA*
Ga0068866_106658712	3300005718	Miscanthus Rhizosphere	AVVAVSCMLADAAAAGVQACLPKQDGFGMALHYLQRVPGVRGGVVVSGDRIGVSGGVEIAG*
Ga0070715_107833862	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ADAAAAGVQACLPKPDGFGMALHYLQRVPGVMGAVVVVGERIGVAGGVEIAG*
Ga0066653_101381041	3300006791	Soil	ADAAAAGVQAILPKPDGFRTALDYLKRVPGVYGAVVILGERIGMMGGVEIAA*
Ga0073934_108316492	3300006865	Hot Spring Sediment	AVVADSCMIADAAAAGVQAILPKKNGFVSALTYLKQVRGVLGGVVVVGDHVGLAGAVEIAA*
Ga0066710_1008496012	3300009012	Grasslands Soil	VATVGGGFGNFNTLGRGHAAVDGLAILATSCMLADAVAAGVQAILPKPDGFRLALSYLKRVPGVHGGVVLQGERIGMAGGVEIAA
Ga0099827_116339561	3300009090	Vadose Zone Soil	ESCTMADAAAAGVQAILPKPDGFHLALQYIRQVPGVTGAVVVLGERIGVAGGVEIAA*
Ga0115026_112238542	3300009111	Wetland	AQTCMLADAAAAGVQACLPKPDGFGMALHYLQRVPGVLGGVVVIGERIGVAGKVEIAG*
Ga0114129_123564411	3300009147	Populus Rhizosphere	MLADAAAAGVQACLPKPDGFGMALHYLQRVPGVRGGVVVIGDRIGVAGAVEIAG*
Ga0111538_135068001	3300009156	Populus Rhizosphere	TGPDGLAVIADTCMAADAAAAGVQALLPKERGFAQAVRYLKGVPNVRGGVFVVGERIGLAGAVEIAG*
Ga0105070_10023443	3300009815	Groundwater Sand	CMLADAAAAGVQALLSKRDGLHLALEYLKKVPGVSGGVVIIGEHIGMTGGVEIAA*
Ga0126313_113392612	3300009840	Serpentine Soil	SVDRGRATVDGLAVLADSCMLADAAAAGVQALLPKENGLASALLYLKKVRGVLGGVIVMGQRIGVAGSVEIAA*
Ga0126312_105886851	3300010041	Serpentine Soil	PDGLAVIATSCMLADAAAAGVQALLPKENGLASALLYLKKVRGVLGGVIVIGQRIGVAGSVEIAA*
Ga0126310_106627231	3300010044	Serpentine Soil	AAGVQALLPKDDGFRKALQYLQQVQGVDGGVVVVGDRIGVAGGVEIAH*
Ga0126311_103473661	3300010045	Serpentine Soil	DAAAAGVQALLPKENGLASALLYLKKVRGVLGGVIVMGPRIGVAGSVEIAA*
Ga0134080_104938102	3300010333	Grasslands Soil	IAKSCMLADAAAAGVQACLPKPDGFGMALHYLQRVPGVRGGVVVVGDRIGVAGAVEIAG*
Ga0137430_12538041	3300012041	Soil	ESCMLADAVAAGVRAILPKENGFDGAMAYLGKIQGVFGAVVLLDGRIGVMGTVELAA*
Ga0137381_113279651	3300012207	Vadose Zone Soil	CMLADATAAGVQALLPKPDGFTLALHYLRQVPGVQGGVVVLGDRIGVAGGVEIAA*
Ga0137371_100601463	3300012356	Vadose Zone Soil	ADSCMTADAAAAGVQAILPKSDGLRSALKYLERVRGVMGGVVVVGERLGFAGSVEVSG*
Ga0164301_101687742	3300012960	Soil	MLADAAAAGVQACLPKPDGFGMALHYLQKVPGVMGAVIVVGERIGVAGGVEIAG*
Ga0164301_116693362	3300012960	Soil	ADAAAAGVQACLPKPDGFGMALHYLPRRPGATGAVVVVGERIGVAGGVELAG*
Ga0164302_117490531	3300012961	Soil	AAAAGVQACLPKPDGFGMALHYLQRVPGVTGAVVVVGERIGVAGGVEIAG*
Ga0164308_111742132	3300012985	Soil	DAAAAGVQACLPKPDGFGMALHYLQKVPGVMGAVVVVGERIGVAGGVEIAG*
Ga0157378_109306281	3300013297	Miscanthus Rhizosphere	DAAAAGGQAILPKENGFASALTYLRKVPGVLGGLVVVGERIGVAGGVEIAA*
Ga0134075_102298501	3300014154	Grasslands Soil	DAAAAGVQAILPKPDGFRTALDYLKRVPGVYGAVVILGERIGMMGGVEIAA*
Ga0075326_10540582	3300014271	Natural And Restored Wetlands	GGGGPDGLAVIADTCMLADAAAAGVQAVLGKPGGFHRALEYLREVPGVHGGVVVTGLDIGVAGGVEIAA*
Ga0134072_104849452	3300015357	Grasslands Soil	MAADAAAAGVQAILPKPNGFKTALKYLERVPEVTGGVIVVGDHLGFAGRVEVA*
Ga0132257_1006395031	3300015373	Arabidopsis Rhizosphere	GLAVLATSCMLADAAAAGVQALLPQEDGFKLALKYLQRVPGVRGGVVVLGEEIGVAGGVEIARP*
Ga0187776_111121832	3300017966	Tropical Peatland	IADSCMRADAAAAGVQALLSKEDGFKEALRYLQHVRGVQGGVVVVGEQIGVAGGVEIARS
Ga0187788_102221571	3300018032	Tropical Peatland	SGPDGLAVIADSCMRADAAAAGVQALLSKEDGFKEALRYLQHVRGVQGGVVVVGEQIGVAGGVEIARSA
Ga0184616_100747462	3300018055	Groundwater Sediment	QPRRGGVGIATGTGRGKAALDGLAVLADSCMLADAAAAGVQAIVPKADGFHLALAYLQKVPGVIGGVVISGDRIGVAGGVEIAA
Ga0187765_100537362	3300018060	Tropical Peatland	LAVIAETCMLADAAAAGVQAVLSKPDGFGMALRYLQAVPKVRGGVVVLGATIGVAGAVEIAG
Ga0184619_100691551	3300018061	Groundwater Sediment	AAAGVQALLPKDDGFKLALQYLRQVPGVRGGVVVVGERIGVAGGVEIAQS
Ga0184625_104881382	3300018081	Groundwater Sediment	GRSEVDGLAVLAESCMLAGAAAAGVQAILTKENGLHGALTYLKQVTGVIGGGVFLGERIGMAGGLELAA
Ga0184625_104939781	3300018081	Groundwater Sediment	LADAAAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVLGDRIGVAGAVEIAA
Ga0187774_103739001	3300018089	Tropical Peatland	TTLGRGRGHSGPDGLAVIADSCMRADAAAAGVQALLSKEDGFKEALRYLQHVRGVQGGVVVVGEQIGVAGGVEIAKSA
Ga0190265_109700252	3300018422	Soil	GRGRGGGGPDGLAVIADSCMAADAAAAGIQALLPKEFGFAQAVRYLKSVPGVRGGVFVVGERIGVAGNLEIAG
Ga0190268_112076282	3300018466	Soil	AGVQALLPKDNGLASALLYLKKVRGVLGGVVVVGQRIGVAGGVELAA
Ga0190268_113135171	3300018466	Soil	AAGVQALLPKEFGFAQAVRYLKGVPGVRGGVFVVGERIGVAGSVEIAG
Ga0190268_120653062	3300018466	Soil	AAAAGVQALLGKAGGLAQALQYLREVPGVHGGVIATGVDIGLSGGVEIAA
Ga0190270_114289202	3300018469	Soil	AAGVQAVLGKPGGFLQALQYLRQVPGVHGGVVVAGVEIGVAGAVEIAA
Ga0190270_119954192	3300018469	Soil	GGPDGLAVIADSCMAADAAAAGVQALLPKEFGFAQAVRYLKGVPGVRGGVFVVGERIGLAGNVEIAG
Ga0190270_126473591	3300018469	Soil	DGLAVIAGTCMLADAAAAGVQAMLGKDEGFHAALEYLQQVPNVLGGVVVVGERIGVAGAVEIAA
Ga0066669_105353961	3300018482	Grasslands Soil	RSCMLADAAAAGGQACLLKPEGFGMALHYLQRVPGVRGGVVVVGERIGVAGAVEIAG
Ga0190264_108166541	3300019377	Soil	AAGVQAVLGKPGGFLQALQYLRQVPGVHGGVVVAGAEIGVAGAVEIAA
Ga0193696_11315302	3300020016	Soil	GRGGRGPDGLAVIAQSCMLAAAAAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVVGDRIGVAGAVEIAA
Ga0196980_10524492	3300021066	Soil	VQALLPKDNGLASALLYLKKVRGVLGGVVVVGQRIGVAGGVELAA
Ga0196959_100626432	3300021184	Soil	IADSCALADAAAAGVQALLPKDNGLASALLYLKKVRGVLGGVVVVGQRIGVAGGVELAA
Ga0210334_102835171	3300021859	Estuarine	CMLADAAAAGVQAVLGKPDGFHLALQYLRHVPGVHGGVVVTGVEIGVAGGVEIAE
Ga0224512_103217211	3300022226	Sediment	DAAAAGVKAILAKPNGFRLALTYLRKVPGVFGGVILQGQQIGVAGGVEIAA
Ga0209322_101136521	3300025146	Soil	MLASPALEIIAAGVRAILPKPDGFHLALTYLKRVPGVTGGVLVQGERIGVAGGVEIAA
Ga0209619_101170622	3300025159	Soil	ARRAPGADGWAVLATSTMLAEAATAGLQALLPKPDGFRSALAYLQKVPGVLGGLVVSGERIGVAGGVEIAA
Ga0209324_107540111	3300025174	Soil	AATAGLQALLPKPDGLRTALAYLQRVPGVLGGVVVSGERIGVAGGVEIAA
Ga0209341_102288632	3300025325	Soil	AVLADSCMLADAAAAGVQAILPKENGLNGALAYLGQVRGVLGGVVLVGERIGVAGAVEIA
Ga0210143_10378632	3300025792	Natural And Restored Wetlands	CMLADAAAAGVQALLPKEDGFKLALRYLQQVPGVRGGVVVVGEEIGVAGGVEIARP
Ga0207692_101231562	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RSCMLADAAAAGVQACLPKPDGFGMALHYLQKVPGVMGAVVVVGERIGVAGGVEIAG
Ga0207670_105753241	3300025936	Switchgrass Rhizosphere	DAAAAGVQALLPKDDGFKLALRYLQQVPGVRGGVVVVGAEIGVAGGVEIARP
Ga0207689_108614121	3300025942	Miscanthus Rhizosphere	QSCMLADAAAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVVGDRIGVAGAVEIAA
Ga0207689_113655362	3300025942	Miscanthus Rhizosphere	VIAGTCMLADAAAAGVQAMLGKDEGFHAALAYLQQVPNVLGGVVVVGERIGVAGAVEIAA
Ga0208287_10011473	3300026044	Natural And Restored Wetlands	DTCMLADAAAAGVQAVLGKPGGFHRALEYLREVPGVHGGVVVTGLDIGVAGGVEIAA
Ga0207708_105618402	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	CMLADAAAAGVQALLPKEDGFKLALKYLQQVPGVRGGVVVVGSEIGVAGGVEIARP
Ga0207648_101241721	3300026089	Miscanthus Rhizosphere	SCMLADAAAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVVGDRIGVAGAVEIAA
Ga0209159_11179231	3300026343	Soil	AHSCMLADAAAAGVQACLLKPEGFGMALHYLQRVPGVRGGVVVVGERIGVAGAVEIAG
Ga0209286_12975832	3300027713	Freshwater Sediment	TGVGVATVLGQGRVPIDGLAVVAESCMLADAAAAGVQAIVPKPDGLRLALIYLQKVPGVRGGVVVQGERIGVAGAVEIAA
(restricted) Ga0233416_103242461	3300027799	Sediment	LAEAAAAGVQAILPKERGFNGALAYLREVRGVHGGVVLVGERIGVAGSVEIAA
Ga0209253_106725752	3300027900	Freshwater Lake Sediment	LGRGKAEVDGLAVLAESCMLAEAAAAGVQAILPKPDGFHLALTYLRKVPGVLGGVVIQGDRIGVAGGVEIAA
(restricted) Ga0233417_100751211	3300028043	Sediment	VVASSCMLADAAAAGVQAILPKPDGLRLALTYLRKVRGVSGGVVVRGEQIGVAGAVEIAA
Ga0272482_102676772	3300028578	Soil	RGGGGPDGLAVIADSCMAADAAAAGVQALLPKDFGFAQAVRYLKGVPGVRGGVFVVGERIGVAGNLEIAG
Ga0307293_101019792	3300028711	Soil	LANSCMLADAAAAGVQAILPKPDGFRTALDYLKKVPGIYGAVVVLGERIGMMGGVEIAA
Ga0307307_103125452	3300028718	Soil	LADAVAAGVQAILPKPDGFRLALSYLKRVPGVHGGVVLQGERIGMAGGVEIAA
Ga0307315_101779361	3300028721	Soil	QSCMLADAAAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVLGDRIGVAGAVEIAA
Ga0307319_101989702	3300028722	Soil	GLAVIADSCMEADAAAAGVQALLPKKLGFAQAVRYLQSVPGVRGGVFVVGERIGVAGNLEIAG
Ga0307290_100682282	3300028791	Soil	DAAAAGVQALLPKEDGFKLALQYLQQVPGVRGGVVVVGERIGVAGGVEIAQS
Ga0307290_103887302	3300028791	Soil	AQSCMLADAAAAGVQACLAKPDGFGMALHYLQQVPGVRGGVVVVGDRIGVAGAVEIAA
Ga0307299_100177993	3300028793	Soil	CMSADAAAAGVQALLPKKLGFAQAVRYLRTVPGVRGGVFVVGERIGVAGNLEIAG
Ga0307284_101720361	3300028799	Soil	GHASVDGLAILATSCMLADAVAAGVQAILPKPDGFRLALSYLKRVPGVHGGVVLQGERIGMAGGVEIAA
Ga0307292_104434191	3300028811	Soil	PDGLAVIADSCMSADAAAAGVQALLPKKLGFAQAVRYLRTVPGVRGGVFVMGERIGVAGNLEIAG
Ga0307308_103050362	3300028884	Soil	PSAVAAAGVQACLLKPEGFGMALHYLQQVPGVRGGVVVVGERIGVAGAVEIAG
Ga0307304_101279272	3300028885	Soil	GVGISTTLGRGHAAVDGLAILATSCMLADAVAAGVQAILPKPDGFRLALSYLKRVPGVHGGVVLQGERIGMAGGVEIAA
Ga0307304_105270361	3300028885	Soil	CMLADAAAAGVQAMLGKDEGFHAALEYLQQVPNVLGGVVVVGERIGVAGAVEIAA
Ga0299907_101933052	3300030006	Soil	RGRGGGGPDGLAVIADSCMAADAAAAGVQALLPKEFGFAQAVRYLKGVPGVRGGVFVVGERIGVAGNLEIAG
Ga0302299_104233562	3300030010	Fen	AAAGVQAVLGKPDGFGMALRYLQQVPSVLGGVVVVGDRIGVAGGVEIA
Ga0308187_102730991	3300031114	Soil	GSAAAAGVQAILPKPDGFRTALDYLKKVPGIYGAVVVLGERIGMMGGVEIAA
Ga0307498_101409221	3300031170	Soil	AGVQACLPKPDGFGMALHYLQKVPGVMGAVVVVGERIGVAGGVEIAG
Ga0247727_100022501	3300031576	Biofilm	AVIAQTCMLADAAAAGVQACLPKPDGFGMALHYLQRVPGVMGGVVVVGERIGVAGAVEIA
Ga0302322_1037819382	3300031902	Fen	AAGVQAVLGKPDGFGMALRYLQQVPSVLGGVVVVGDRIGVAGGVEIA
Ga0310900_107460481	3300031908	Soil	DGLAAVAVSCMLADAAAAGVQACLPKQDGFGMALHYLQRVPGVRGGVVVSGDRIGVSGGVEIAG
Ga0315294_108451811	3300031952	Sediment	RIAVDGLALIAESCMLADAAAAGVQAILPKDDGFRLALAYLKRVPGVRGGVVVQGDRIGVVGGVEISA
Ga0310899_102116141	3300032017	Soil	AAGVQALLPKERGFAQAVRYLKGVPNVRGGVFVVGERIGLAGAVEIAG
Ga0307415_1005132432	3300032126	Rhizosphere	GLAVIADTCMAADAAAAGVQALLPKERGFAQAVRYLKGVPGVRGGVFVVGERIGLAGRLEIAG
Ga0315281_101102751	3300032163	Sediment	TCMLADAAAAGVQAILPKSGGFDQALRYLQQVRGVQGGVIVVGDRIGVAGAVEIAE
Ga0315273_110429752	3300032516	Sediment	TTLGRGHAVVDGLAVLATSCMLADAAAAGVQAILPKPDGFRLALSYLKRVPGVYGGVVLQGERIGMAGGVEIAA
Ga0335081_116536732	3300032892	Soil	IADSCMLADAAAAGVQAILPKEDGFKLALQYLQRVPGVRGGVFVVGQQIGVAGGLEIAQS
Ga0214472_100899411	3300033407	Soil	AWGAAAAAAAAGVQAILPKPDGFGMALHYLQRVPGVRGAIVVLGDRIGVSGALEIAG
Ga0214472_104773191	3300033407	Soil	AVIAESCMLADAAAAGVQAIVPKEHGFAGALTYLKAVPGVVGGVVMVGERIGVAGGVEIV
Ga0316622_1031796151	3300033416	Soil	VATTLGQGSQLDGLAVLAESCMLADAAAAGVHAIVPKPDGFHLALTYLRKVPGVIGGIVVQGDRIGVAGGVEIAA
Ga0316600_108085451	3300033481	Soil	ESCMLADAAAAGVQAILPKQDGFRLALTYLKKVPGVRGGVVVQGARIGVAGGVEIAA
Ga0247829_104523322	3300033550	Soil	GGPDGLAVIAGTCMLADAAAAGVQAMLGKDEGFHAALEYLQQVPNVVGGVVVVGERIGVAGAVEIAA
Ga0364931_0258581_330_572	3300034176	Sediment	PAGFGVATSTPGGGGPDGLAVIAKTSMLAASATAGVQALLGKPNGLHSALRYLERVPGVFGGVVIEGERIGVAGAVELAS
Ga0364932_0405996_227_451	3300034177	Sediment	MTIGRGHAVVDGLAILADSCMVADAAAAGVQAILPKENGLRSALAYLKQVRGVLGGLVVIGDRIGVAGGVEIAA
Ga0373905_072692_38_238	3300034414	Sediment Slurry	VVDGLAVLASSCMLADATAAGVQAILSKRDGFRLALDYVKNVPGVHGGLVVLGDRIGLTGNVEIAA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters