Metagenome / Metatranscriptome Family F067036

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067036
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	87 residues
Representative Sequence	MTFNSTSRSDEVEPNAVKALIEEAKLAEREGRWSEASTRYESLVRNPFADDRTRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAA
Number of Associated Samples	120
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.25 %
% of genes near scaffold ends (potentially truncated)	97.62 %
% of genes from short scaffolds (< 2000 bps)	91.27 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.476 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.873 % of family members)
Environment Ontology (ENVO)	Unclassified (29.365 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.063 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.18% β-sheet: 0.00% Coil/Unstructured: 39.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF02954	HTH_8	89.68
PF13424	TPR_12	3.17
PF13432	TPR_16	2.38
PF13414	TPR_11	0.79
PF13374	TPR_10	0.79
PF13176	TPR_7	0.79
PF13365	Trypsin_2	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	62.70 %
Unclassified	root	N/A	9.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	62.70 %
Unclassified	root	N/A	9.52 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	62.70 %
Unclassified	root	N/A	9.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	62.70 %
Unclassified	root	N/A	9.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_14072556	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300001526\|A105W1_1225484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300001534\|A15PFW1_10823180	Not Available	687	Open in IMG/M
3300002561\|JGI25384J37096_10113830	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300004114\|Ga0062593_100158673	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300004153\|Ga0063455_100992925	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300004643\|Ga0062591_102993914	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005167\|Ga0066672_10421153	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300005167\|Ga0066672_10946280	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005172\|Ga0066683_10028065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3220	Open in IMG/M
3300005175\|Ga0066673_10374707	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005179\|Ga0066684_10246925	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1170	Open in IMG/M
3300005328\|Ga0070676_10688803	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005329\|Ga0070683_100175505	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300005330\|Ga0070690_100688165	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005343\|Ga0070687_100997767	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300005345\|Ga0070692_10246246	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005354\|Ga0070675_101797681	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005356\|Ga0070674_101303855	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300005406\|Ga0070703_10397809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	599	Open in IMG/M
3300005438\|Ga0070701_10543131	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005439\|Ga0070711_100811205	Not Available	794	Open in IMG/M
3300005441\|Ga0070700_101591189	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005444\|Ga0070694_100605227	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005445\|Ga0070708_100082244	All Organisms → cellular organisms → Bacteria	2916	Open in IMG/M
3300005450\|Ga0066682_10843200	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005536\|Ga0070697_100295390	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300005539\|Ga0068853_102310933	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005545\|Ga0070695_100849642	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005552\|Ga0066701_10047053	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2349	Open in IMG/M
3300005569\|Ga0066705_10881688	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005574\|Ga0066694_10567091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300005578\|Ga0068854_101407869	Not Available	630	Open in IMG/M
3300005598\|Ga0066706_10223924	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300005718\|Ga0068866_10863799	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300005886\|Ga0075286_1061585	Not Available	540	Open in IMG/M
3300005938\|Ga0066795_10248693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300006032\|Ga0066696_11033981	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300006173\|Ga0070716_101163986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300006173\|Ga0070716_101741661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300006796\|Ga0066665_10761628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	766	Open in IMG/M
3300006796\|Ga0066665_11087745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300006797\|Ga0066659_11091247	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300006797\|Ga0066659_11421794	Not Available	579	Open in IMG/M
3300007258\|Ga0099793_10348167	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	724	Open in IMG/M
3300007822\|Ga0104325_110366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1197	Open in IMG/M
3300009012\|Ga0066710_104052496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300009038\|Ga0099829_10187475	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1668	Open in IMG/M
3300009090\|Ga0099827_11012815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300009100\|Ga0075418_10685621	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1104	Open in IMG/M
3300009148\|Ga0105243_13081882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300010373\|Ga0134128_12925260	Not Available	526	Open in IMG/M
3300010396\|Ga0134126_10960311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	959	Open in IMG/M
3300010397\|Ga0134124_11294361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	752	Open in IMG/M
3300011999\|Ga0120148_1027075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1250	Open in IMG/M
3300012004\|Ga0120134_1009629	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1455	Open in IMG/M
3300012010\|Ga0120118_1094852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
3300012091\|Ga0136625_1325632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300012201\|Ga0137365_10669637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300012202\|Ga0137363_10022699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4232	Open in IMG/M
3300012205\|Ga0137362_11527934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300012206\|Ga0137380_11436839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	574	Open in IMG/M
3300012208\|Ga0137376_10156027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1965	Open in IMG/M
3300012209\|Ga0137379_10681272	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300012683\|Ga0137398_10382529	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	957	Open in IMG/M
3300012918\|Ga0137396_11081808	Not Available	575	Open in IMG/M
3300012923\|Ga0137359_10657113	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300012929\|Ga0137404_11239226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	687	Open in IMG/M
3300012944\|Ga0137410_11760842	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300012951\|Ga0164300_10573063	Not Available	661	Open in IMG/M
3300012955\|Ga0164298_10381331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	904	Open in IMG/M
3300012986\|Ga0164304_10550640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	852	Open in IMG/M
3300013100\|Ga0157373_10251967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1249	Open in IMG/M
3300013296\|Ga0157374_10273279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1667	Open in IMG/M
3300013297\|Ga0157378_12627513	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300013307\|Ga0157372_10767011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1121	Open in IMG/M
3300014058\|Ga0120149_1131391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	683	Open in IMG/M
3300015162\|Ga0167653_1016433	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1453	Open in IMG/M
3300015372\|Ga0132256_100006990	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9709	Open in IMG/M
3300017997\|Ga0184610_1067657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1086	Open in IMG/M
3300018028\|Ga0184608_10307003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300018054\|Ga0184621_10035828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1607	Open in IMG/M
3300018061\|Ga0184619_10046108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1884	Open in IMG/M
3300018078\|Ga0184612_10446970	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	643	Open in IMG/M
3300018429\|Ga0190272_11190420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300018432\|Ga0190275_13166267	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300019875\|Ga0193701_1065349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300020001\|Ga0193731_1060679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	992	Open in IMG/M
3300020022\|Ga0193733_1177704	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300021344\|Ga0193719_10073650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1483	Open in IMG/M
3300021363\|Ga0193699_10014839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2814	Open in IMG/M
3300021951\|Ga0222624_1435149	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300021968\|Ga0193698_1028051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	742	Open in IMG/M
3300023261\|Ga0247796_1082616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300024178\|Ga0247694_1024276	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	681	Open in IMG/M
3300024330\|Ga0137417_1378327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300025910\|Ga0207684_11108360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300025912\|Ga0207707_10874369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	744	Open in IMG/M
3300025916\|Ga0207663_11545933	Not Available	534	Open in IMG/M
3300025930\|Ga0207701_10250933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1545	Open in IMG/M
3300025934\|Ga0207686_10991618	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	681	Open in IMG/M
3300025939\|Ga0207665_11017992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300025993\|Ga0208415_1015155	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	734	Open in IMG/M
3300026089\|Ga0207648_11597460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300026325\|Ga0209152_10246635	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300026327\|Ga0209266_1025445	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3209	Open in IMG/M
3300026529\|Ga0209806_1124424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1036	Open in IMG/M
3300026538\|Ga0209056_10244437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1279	Open in IMG/M
3300026542\|Ga0209805_1211732	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300027645\|Ga0209117_1030976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1671	Open in IMG/M
3300028716\|Ga0307311_10147845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	675	Open in IMG/M
3300028717\|Ga0307298_10064178	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300028784\|Ga0307282_10481108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	603	Open in IMG/M
3300028787\|Ga0307323_10145521	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	855	Open in IMG/M
3300028799\|Ga0307284_10028708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1846	Open in IMG/M
3300028824\|Ga0307310_10549747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300030972\|Ga0075400_10807541	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300031114\|Ga0308187_10492907	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300031231\|Ga0170824_103600842	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300031469\|Ga0170819_16633194	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031740\|Ga0307468_100887280	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	771	Open in IMG/M
3300031740\|Ga0307468_100995869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	737	Open in IMG/M
3300032180\|Ga0307471_100468261	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1403	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.30%
Host-Associated	Host-Associated	12.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.75%
Plants	Host-Associated → Plants	12.70%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.52%
Sediment	Environmental → Aquatic → Sediment	3.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.17%
Freshwater	Environmental → Aquatic → Freshwater	1.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.90%
Loam	Environmental → Terrestrial → Soil → Loam	17.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.59%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001526	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-5cm-1A)- 1 week illumina	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007822	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-8-2 Soapdenovo	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030972	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_140725561	3300000363	Soil	MSVRITPRSWELEAPQIKAFIEAAKLAEREGRWSEAALSYETLVRDPMASDLTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGL
A105W1_12254842	3300001526	Permafrost	VKARSTPGSRESESPHISDLVEQAKLAEREGRWSDAAVSYESLVRDPLANDQTRLSALRWLGRVYLEQGNRGAAMDVLEAAVAA
A15PFW1_108231801	3300001534	Permafrost	MKVRSTSVSDEVELPEIGALVDEAKLAEREGRWSDASARYEALVRNPFANDYTRLSSLRWLGRAYL
JGI25384J37096_101138302	3300002561	Grasslands Soil	MTVTSTSRSDEVESNAVKALIEEAKLAEREGRWSEASTRYESLVRNPFADDRTRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAATQAGSPSAIAQALNVVA
Ga0062593_1001586731	3300004114	Soil	VSVRSPARARQLETPAIQAFIDEAKQAEREGRWSDAAHSYEGLVRHRLANHYTRLSALRWLGRVYLEQGNRGAAIDVLEAAVA
Ga0063455_1009929251	3300004153	Soil	MTSRSTSRRSEVESGAVKALIEEAKLAEKEGRWTDAASRYESLVRNSSADPQHRLSALRWLARAYLEQGN
Ga0062591_1029939141	3300004643	Soil	MKRRKTPPSERLEPAGIRALIDVAKAAERDGRWTEASAQYESLVRNPLAGVETRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQAGSRS
Ga0066672_104211531	3300005167	Soil	MTVNSTSRSSEVESSAVKALIEEAKLAERDGRWSEASTRYESLVRNPFADDPTRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAATQAGSPSAIAQ
Ga0066672_109462802	3300005167	Soil	MNQNSTSRDDEVDSRGIRVLIDEAKLAEREGRWSDAAARYEGLVRNPFADDHDRLSALRWLGRAYLEQGNRGAA
Ga0066683_100280655	3300005172	Soil	MTVTSTSRSDEVESNAVKALIEEAKLAEREGRWSEASTRYESLVRNPFADDRTRLSALRWLGRAYLEQGNRGA
Ga0066673_103747072	3300005175	Soil	MKQSSTSRNDEVESQGVRALIDEAKLAEREGRWNDAAARYEALVRNPFAGDQDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAANQAHSPSAIAQALNVVAIVHQTGGDLDLAESM
Ga0066684_102469252	3300005179	Soil	MIAQGSTSRSNEVESQAVRALIDEAKLAEREGRWNDAAARYEGLVRNPFAGDQDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQADSQSAIAQALNVIAIVHQTGGDLDLAES
Ga0070676_106888031	3300005328	Miscanthus Rhizosphere	MRVGSTSRFDEVESNAVKVLIDEAKLAEREGRWSEAALRYEGLIRNPFADDLTRLAALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGSQSAIAQALNVVAIVHQT
Ga0070683_1001755051	3300005329	Corn Rhizosphere	MKRRKTPPSERLEPAGIRALIDVAKAAERDGRWTEASAQYESLVRNPLAGVETRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQAGSR
Ga0070690_1006881651	3300005330	Switchgrass Rhizosphere	MNEHSTSRAGEVETVTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQARSQSSIAQALNVVAIAH
Ga0070687_1009977671	3300005343	Switchgrass Rhizosphere	MNAHSTSRLGEVESGTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQGNRGAAMDVLEAAVAA
Ga0070692_102462462	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNEHSTSRAGEVETVTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQ
Ga0070675_1017976811	3300005354	Miscanthus Rhizosphere	MNEHSTSRAGEVETVTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQGNRGAAMDVLEAAVA
Ga0070674_1013038551	3300005356	Miscanthus Rhizosphere	MNEHSTSRAGEVETVTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQARSQSSIAQAL
Ga0070703_103978092	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSTPRQGEVESVEINALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGIAYLEQGNRGAAIDV
Ga0070701_105431312	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTSRSTSRSREVESQAVKDLIEQAKLAEKEGRWTDAALRYETLVRHAGADHQDRLCALRWLGRAYLEQGNRGAAIDVLEAAVAAA
Ga0070711_1008112051	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTARSTSRDGEVESQAIQALVEEAKVAEREGRWTDASHRYELLVRNPFADDVTRLSALRWLGRVYLELGNRGAA
Ga0070700_1015911892	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRSTSRSGEVETQAVKALVEEAKRAEREGRWNDAAAGYESLVRHSSADPQDRLSALRWLGRAYLEQGNRGAAIDVLE
Ga0070694_1006052272	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNAHSTSRLGEVESGTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQ
Ga0070708_1000822441	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRVRYTPRSNEVESPEIKVLIEAAKLAEREGRWSDASVRYEALVRNPFASDHTRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAATQAGSPSAI
Ga0066682_108432002	3300005450	Soil	MSVQSTSRSDEVELQAIKAFIEDAKLAEREGRWSEASIKYENLVRNPFADDLTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAA
Ga0070681_106589582	3300005458	Corn Rhizosphere	MTRRSTSRCGEVETQAVKALVEEAKRAEREGRWNDAAAGYESLVRHSSADPQDRLSALRWLGRAYLEQGNRGA
Ga0070697_1002953901	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSVRRTARSAKEATPQIKALVESAKLAEREGRWSDAALSYESLVRDPLADDQTRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATAAGSPSKIAQAL
Ga0068853_1023109331	3300005539	Corn Rhizosphere	MTRRSTSRCGEVETQAVKALVEEAKRAEREGRWNDAAAGYESLVRHSSADPQDRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAATQA
Ga0070695_1008496421	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTQEQGSTSRSDEMDSQAIRALIDEAKLAEREGRWNDAAARYEGLVRNPFAEEQDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAASQAHSPSAIAQAMNVVAIVHQTGGD
Ga0066701_100470531	3300005552	Soil	MTVTSTSRSDEVESNAVKALIEEAKLAEREGRWSEASTRYESLVRNPFADDRTRLSALRWLGRAYLEQGN
Ga0066705_108816881	3300005569	Soil	MIAQGSTSRSNEVESQAVRALIDEAKLAEREGRWNDAAARYEGLVRNPFAGDQDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQADSQSAIAQALNVIAIVHQTGGDLDLAESMY
Ga0066694_105670911	3300005574	Soil	MMQGSTSRNDEVESQGIRVLIDEAKAAEREGRWSDAAAHYEGLVRNPFADDQDRLSALRWLGRAYLEQ
Ga0068854_1014078691	3300005578	Corn Rhizosphere	MSRRSTPRQGEVESVEINALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLE
Ga0066706_102239242	3300005598	Soil	MRQNSTSRTNEVEFQATRALIDDAKLAEREGRWGDAAARYEGLVRNPFAGDEDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSAIAQALNVVAIVHQTGGDLDLAESM
Ga0068866_108637992	3300005718	Miscanthus Rhizosphere	MNAHSTSRAGEVESGTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDMDRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQARSQSS
Ga0075286_10615852	3300005886	Rice Paddy Soil	MSVSSTSRPDEVDAGGVKSLIDEAKQAEREGRWSEAALRYEALVRNPFADDHTRLSALRWLGRVYLEQGN
Ga0066795_102486931	3300005938	Soil	MSVRSTPRSWELEAPQIQAFIDEAKLAEREGRWSDAALSYESLVRDPLANELTRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSKIAQALNVVAIVHQTSG
Ga0066696_110339811	3300006032	Soil	MIAQGSTSRSNEVESQAVRALIDEAKLAEREGRWNDAAARYEGLVRNPFAGDQDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQADSQSAIAQ
Ga0070716_1011639862	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSTPRQGEVESVEINALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLEQGNRGAAIDVLEAA
Ga0070716_1017416612	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNQSSTSRDNEVDSRGIRVLIDEAKLAEREGRWSDAAARYEGLVRNPFADDQDRLSALRWLGRAYLEQGNRGAAMDVLEA
Ga0066665_107616282	3300006796	Soil	MTFNSTSRSDEVEPNAVKALIEEAKLAEREGRWSEASTRYESLVRNPFADDRTRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAA
Ga0066665_110877451	3300006796	Soil	MRQNSTSRTNEVEFQATRALIDDAKLAEREGRWGDAAARYEGLVRNPFAGDEDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSAIAQALNVVAIVHQ
Ga0066659_110912471	3300006797	Soil	MKDVSTSHNEVEERGIRALIEEAKLAEREGRWSEAAGRYEALVRNPFAQEQDRLSALRWLGRVYLEQGNRGAAMDV
Ga0066659_114217942	3300006797	Soil	MRQNSTSRTNEVEFQATRALIDDAKLAEREGRWGDAAARYEGLVRNPFAGDEDRLSALRWLGRVYLE
Ga0099793_103481671	3300007258	Vadose Zone Soil	VKLRSTPGSRESESPGIRDLVDQAKLAEREGRWSDAAVTYEILVRDPLANEQTRLSALRWLGRVYLEQGNRGAAM
Ga0104325_1103661	3300007822	Soil	VKPRSTPGSRESESPQIKALVDQAKLAEREGRWSHAAESYESLVRDPLANEQTRLSALRWLGRVYLEQGNRGAAMDVQIGKHTSELQSHS
Ga0066710_1040524962	3300009012	Grasslands Soil	MKGHSTSRNGEVESQGVRALIEEAKQAEREGRWSDAAARYEGLVRNPFAGDEDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSP
Ga0099829_101874753	3300009038	Vadose Zone Soil	MSVRYTPRSNEAESPEIRALIEAAKLAEREGHWSDASVRYEALVRNPFASDHTRLSALRWLGRAYLEQGNRGAAIDVLEAAVA
Ga0099827_110128152	3300009090	Vadose Zone Soil	MRVRYTPRSNEVESPEIRVLIEAAKLAEREGRWSDASVRYEALVRNPFASDHTRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAATQAGSPSA
Ga0075418_106856212	3300009100	Populus Rhizosphere	VTARSTSRKGEVETRGIESIVEEAKLAEREGRWSDASQRYERLVRDPFADHTTRLSALRWLGRAYLELGNRGAAMDVLEAAVAAATQSGSPSAIAQALNVVAIVHQTG
Ga0105243_130818822	3300009148	Miscanthus Rhizosphere	MNAHSTSRAGEVESGTIKTLIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQGNRGAAMDVL
Ga0134128_129252601	3300010373	Terrestrial Soil	VESVEINALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLE
Ga0134126_109603111	3300010396	Terrestrial Soil	MKQRSTSRNDEVESEGVRVLIDEAKQAEREGRWSDAAARYEGLVRNPFAGDHDRLSALRWLGRVYLEQGNRGAA
Ga0134124_112943611	3300010397	Terrestrial Soil	MTRRSTSRSGEVETQAVKALVEEAKRAEREGRWNDAAARYESLVRHSSADPQDRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAATQAG
Ga0120148_10270751	3300011999	Permafrost	VKLRSTPGSRESESPQIKALVDEAKLAEREGRWSDAAVYYESLVRDPLAHDHTRLSALRWLGRVYLEQGN
Ga0120134_10096291	3300012004	Permafrost	VKLRSTPGSRESESPQIKALVDQAKLAEREGRWTDAAVYYESLVRDPLAHDLTRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSKIAQAL
Ga0120118_10948522	3300012010	Permafrost	VKLRSTPGSRESESPQIKALVDEAKLAEREGRWSDAAVYYESLVRDPLAHDHTRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSKIAQA
Ga0136625_13256322	3300012091	Polar Desert Sand	MTATPSGDINAVESPAVRALIDEAKTAEREGRWRDASAHYESLVRDPNTHVYTRLAALRWLGRAYLEQGNRGASIDVLEAAVAAATQEGSPSLITHALNVVAIVHQTGGDLDK
Ga0137365_106696372	3300012201	Vadose Zone Soil	MSLQSTSRSDEVELQVIKALIEEAKLAEREGRWNEASIKYENLVRNPFADDLTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGSSSAIAQALNVV
Ga0137363_100226991	3300012202	Vadose Zone Soil	MRVRYTPRSNEVESPEIRVLIEAAKLAEREGRWSDASVRYEALVRNPFASDHTRLSALRWLGRAYLEQGNRGAAIDVLEAAVAAATQ
Ga0137362_115279341	3300012205	Vadose Zone Soil	MSDRSTSRSDEVESQAIKALIDEAKLAERERRWSDASIRYESLVRNPFADDQVRLAALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGSQSAIAQALNV
Ga0137380_114368392	3300012206	Vadose Zone Soil	MKQNSTSRPDEVESQGITATGIRALIEEAKLAEREGRWGDAAARYEGLVRNPFADDQDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSATAQAWNV
Ga0137376_101560271	3300012208	Vadose Zone Soil	VRSRSTPRSWERETPQIRAFIEEAKRAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAID
Ga0137379_106812722	3300012209	Vadose Zone Soil	MKQNSTSRPDEVESQGITATGIRALIEEAKLAEREGRWGDAAARYEGLVRNPFADDQDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSATAQALNVVAIVHQTGGDLDLAE
Ga0137398_103825292	3300012683	Vadose Zone Soil	VESVEIDALVDEAKRAEREGRWSEASARYEALVRNPFASDETRLCALRWLGRAYLEQGNRGAAIDVLE
Ga0137396_110818082	3300012918	Vadose Zone Soil	MSDRSTSRSDEVESQAIKALIDEAKIAERERRWSDASIRYESLVRNPFADDQIRLAALRWLGRVYLE
Ga0137359_106571132	3300012923	Vadose Zone Soil	MRVRYTPRSNEVESPEIRVLVEAAKLAEREGRWSDASVRYEALVRNPFASDHTRLSALRWLGRAYLEQGNRGAAIDVLE
Ga0137404_112392261	3300012929	Vadose Zone Soil	MSDRSTSRSDEVESQAIKALIDEAKLAERERRWNDASLRYENLVRNPFANDQVRLAALRWLGRVYLEQGNRGAAIDVLEAAVAAATQA
Ga0137410_117608422	3300012944	Vadose Zone Soil	MSDRSTSRSDEVESQAIKALIDEAKVAERERRWSDASIRYESLVRNPFADDQIRLAALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGSQS
Ga0164300_105730631	3300012951	Soil	MTARSTSRESEVESQAIQSLVEEAKVAEREGRWTDAAHRYELLVRNPFADDETRLSALRW
Ga0164298_103813311	3300012955	Soil	MTDRSTSRADEVDSGVVQVLIDEAKLAEREGRWSEAALRYEALVRNPFADDQIRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGSPSAIAQALNVV
Ga0164304_105506401	3300012986	Soil	MTDRSTSRADEVDSGVVQVLIDEAKLAEREGRWSEAALRYEALVRNPFADDQIRLSALRWLGRVYLEQGNRGAAIDVLEAAVAA
Ga0157373_102519672	3300013100	Corn Rhizosphere	MRVRSTSRSGEVEASGIRVLIDEAKLAERDGRWSEAALRYEALVRNPFADDQTRLSALRWLGRVYLEQGNRGA
Ga0157374_102732791	3300013296	Miscanthus Rhizosphere	VESVEINALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLEQGNRGAAIDVLEAAVAAATQAGSK
Ga0157378_113707142	3300013297	Miscanthus Rhizosphere	MSRRSTPRQGEVESVEINALVDEAKRAEREGRWSEASARYEALVRNPFANDETRLCALRWLGR
Ga0157378_126275132	3300013297	Miscanthus Rhizosphere	MTDVSTSRDDEVESQGIRALIDDAKLAERERRWSDAAGRYEALVRSPFAKEQDRLSALRWLGRVYLEQGNRGAAM
Ga0157372_107670112	3300013307	Corn Rhizosphere	MTARSTSRDGEVEATAIKAIVEEAKLAEREGRWSDASHRYEQLVRNPFADDVTRLSALRWLGRCYLEQGNRGAAMDVLEAAVAAATQAGSASA
Ga0120149_11313911	3300014058	Permafrost	VKPRSTPGSRESESPQIKALVDQAKLAEREGRWTDAAVGYESLVRDPLANEQTRLSALRWLGRVYLEQGNRGAAMDVLEAAA
Ga0167653_10164331	3300015162	Glacier Forefield Soil	LESPQIKALVDQAKLAEREGRWSDAAVFYESLVRDPLANDQTRLSALRWLGRVYLEQGNRGAA
Ga0132256_1000069901	3300015372	Arabidopsis Rhizosphere	MTSRSTSRSREVESQAVKALIEEAKLAEKEGRWTDAALRYETLVRHAGADHQDRLCALRWLGRAYLEQGNRGAAIDVLEAAVA
Ga0184610_10676572	3300017997	Groundwater Sediment	VKSRSTPRSWERETPQIRAFIEEAKRAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAASQAGSKSAIAQALNVVAIVH
Ga0184608_103070032	3300018028	Groundwater Sediment	VSVRSSPARSRQVETPAIQAFIDQAKLAEREGRWTDAAQSYEGLVRHRFANHHTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGS
Ga0184621_100358283	3300018054	Groundwater Sediment	VSVRSSPARSRQVETPAIQAFIDQAKLAEREGRWTDAAQSYEGLVRHRFANHHTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGSPSAIAQALNVVAIVHQTGGDLDRA
Ga0184619_100461083	3300018061	Groundwater Sediment	VRSRSTPRSWERETPQVRAFIEEAKRAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAASQAG
Ga0184612_104469701	3300018078	Groundwater Sediment	MSVRSTPRSWELEAPQIKALIEAAKLAEREGRWSEAALSYETLVRDPLAKDLTRLSALRWLGRVYLEQGNRGAAIDV
Ga0190272_111904201	3300018429	Soil	MSVRSTPRSWELEAPQIKAFIEAAKLAEREGRWSEAALSYETLVRDPMASDQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAATQAGSETAIAQALNVV
Ga0190275_131662671	3300018432	Soil	MTATPTTAILAAESAAVKALIDDAKTAEREGRWSDASARYETLVRDPTSHVQTRLAALRWLGRAYLEQGNRGAA
Ga0193701_10653491	3300019875	Soil	VRSRSTPRSWERETTQIRAFIEEAKRAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAASQAGSKSAIAQALNVVAIVHQTGGDLDR
Ga0193718_10385321	3300019999	Soil	MTRRSTPRQGEVESVEISALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGR
Ga0193731_10606792	3300020001	Soil	MTRRSTPRQGEVESVEISALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLEQG
Ga0193733_11777042	3300020022	Soil	VKLRSTPGSREAESPQIKALVEQAKLAEREGRWSDAAVSYESLVRDPLANEQTRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSKIAQALN
Ga0193719_100736502	3300021344	Soil	MSVRSTARSAKELAPAIKAFVEDAKLAEREGRWSDAALNYESLVRDPLADEQTRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAAT
Ga0193699_100148391	3300021363	Soil	MRVRSTPRTNEVESSEIKALVDEAKLAEREGRWSDASARYEALVRNSFASDHTRLSALRWLGRAYLEHGNRG
Ga0222624_14351492	3300021951	Groundwater Sediment	VRSRSTPRSWERETPQIRAFIEEAKRAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAASQAGSKSA
Ga0193698_10280511	3300021968	Soil	VKPRSTPGSRESESPQIKALVDQAKLAEREGRWSHAAECYESLVRDPLANEQTRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSP
Ga0247796_10826161	3300023261	Soil	MNAHSTTRAGEVESGTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQARSQSSIAQALNVVAIAHQTGGDLD
Ga0247694_10242761	3300024178	Soil	MSRRSTPRQGEVESVEINALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLEQGNRGA
Ga0137417_13783272	3300024330	Vadose Zone Soil	MRVRYTPRSNEVESPEISVLIEAAKLAEREGRWSDASVRYEALVRNPFASDHTRLSALRWLGRAYLEQGNRGAA
Ga0207684_111083601	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRQNSTSRTDEVEFQAIRALIDDAKLAEREGRWGDAAARYEGLVRNPFAGDEDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSAIAQ
Ga0207707_108743692	3300025912	Corn Rhizosphere	MTDVSTSRTDEVESQGIRALIDDAKLAERERRWSDAAGRYEALVRSPFAKEQDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSAIAQALNV
Ga0207663_115459331	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTARSTSRDGEVESQAIQALVEEAKVAEREGRWTDASHRYELLVRNPFADDVTRLSALRWLGRVYLELG
Ga0207701_102509331	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNAHSTSRLGEVESGTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDLDRLSALRWLGRAYLEQGNRGAAMDVLE
Ga0207686_109916181	3300025934	Miscanthus Rhizosphere	MTRRSTSRSGEVETQAVKALVEEAKRAEREGRWNDAAARYESLVRHSSADPQDRLSALRWLGRAYLEQGNRGAAIDVLEAAV
Ga0207665_110179922	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MNQSSTSRDNEVDSRGIRVLIDEAKLAEREGRWSDAAARYEGLVRNPFADDQDRLSALRWLGRAYLEQGNRGAAMDVLEAAD
Ga0208415_10151551	3300025993	Rice Paddy Soil	MSVSSTSRPDEVDAGGVKSLIDEAKQAEREGRWSEAALRYEALVRNPFADDHTRLSALRWLGRVYLEQGNRGAAIDVLE
Ga0207648_115974601	3300026089	Miscanthus Rhizosphere	MSVRITPRSWELEAPQIKAFIEAAKLAEREGRWSEAALSYETLVRDPMASDLTRLSALRWLGRVYLEQGNRGAA
Ga0209152_102466351	3300026325	Soil	MRQNSTSRNNEVEFQAIRALIDDAKLAEREGRWGDAAARYEGLVRNPFAGDEDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSAIA
Ga0209266_10254455	3300026327	Soil	MTVTSTSRSDEVESNAVKALIEEAKLAEREGRWSEASTRYESLVRNPFADDRTRLSALRWLGRAYLEQG
Ga0209806_11244242	3300026529	Soil	MRQNSTSRNNEVEFQAIRALIDDAKLAEREGRWGDAAARYEGLVRNPFAGDEDRLSALRWLGRVYLEQGNRGAAMDVLEAAVAAATQAGSPSAIAQALNVVAIVHQTGGDLDL
Ga0209056_102444371	3300026538	Soil	MTVNSTSRSSEVESSAVKALIEEAKLAERDGRWSEASTRYESLVRNPFADDPTRLSALRWLGRAYLEQGNRGAAIDVLEAA
Ga0209805_12117321	3300026542	Soil	MNQTSTSRDDEVDSRGIRVLIDEAKLAEREGRWSDAAARYEGLVRNPFADDHDRLSALRWLGRAYLEQGNRGAAMDVL
Ga0209117_10309761	3300027645	Forest Soil	MVDEAKLAEREGRWSDAAVSYESLVRDPLANEQTRLSALRWLGRVYLEQGNRGAAMDVLE
Ga0307311_101478452	3300028716	Soil	VRSRSTPRSWERETTQIRAFIEEAKGAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAASQAGSKSAIAQAL
Ga0307298_100641781	3300028717	Soil	VRSRSTPRSWERETTQIRAFIEEAKGAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAASQA
Ga0307282_104811082	3300028784	Soil	MTRRSTPRQGEVESVEISALVDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLEQGNRGAAIDVLEAAVAAATQAGSKSAIAH
Ga0307323_101455211	3300028787	Soil	VRSRSTPRSWERETPQIRAFIEEAKRAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAASQAGSKSAIAQAL
Ga0307284_100287083	3300028799	Soil	MSLRSTVRSAKKEGSEIQALVDEAKLAEREGRWSEAALSYERLVRDPVADDQTRLCALRWLGRVYLEQGNRGAAIDVLEA
Ga0307310_105497471	3300028824	Soil	MKRRKTPPTERLEPAGIRALIDVAKAAERDGRWTEASAQYESLVRNPLAGVETRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQAGSRSAIAQALNVVAIVHQTG
Ga0075400_108075412	3300030972	Soil	MKRRKTPRTERLEPAGIRVLIDVAKAAERDGRWTEASAQYESLVRNPLAGVETRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQAGSRSAIAQALNVVAIVHQTGGDLDHA
Ga0308187_104929071	3300031114	Soil	VRSRSTPRSWERETTQIRAFIEEAKRAEREGRWSDAALSYETLVRDPLANHQTRLSALRWLGRVYLEQGNRGAAIDVLEAAVAAASQA
Ga0170824_1036008422	3300031231	Forest Soil	MSRRSTPRQGEVESVEISALIDEAKRAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLEQGNRGAAIDVLEAAVAAATQAGSKSAIA
Ga0170819_166331941	3300031469	Forest Soil	MTRRSTPRQGEVESVEISALIDEAKWAEREGRWSDASARYEALVRNPFANDETRLCALRWLGRAYLEQGNRGAAIDVLEAA
Ga0307468_1008872801	3300031740	Hardwood Forest Soil	MNAHSTSRAGEVESGTIKALIGEAKLAERERRWSDAAVRYEGLVRNPLADDMDRLSALRWLGRAYLEQGNRGAAMDVLEAAVAAATQARSQSSIAQALNVVAIAHQTGGDLDRAE
Ga0307468_1009958691	3300031740	Hardwood Forest Soil	MNQSSTSRDNEVDSRGIRVLIDEAKLAEREGRWSDAAARYEGLVRNPFADDQDRLSALRWLGRAYLEQGNRGA
Ga0307471_1004682611	3300032180	Hardwood Forest Soil	MRVRYTPRSNEIESPEIRTLVEAAKLAEREGRWSDASVRYEALVRNPFASDHTRLSALRWLGRAYLEQGNRGAAID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067036

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences