Metagenome Family F066880

Basic Information
Family ID	F066880
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	115 residues
Representative Sequence	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN
Number of Associated Samples	112
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.02 %
% of genes near scaffold ends (potentially truncated)	29.37 %
% of genes from short scaffolds (< 2000 bps)	77.78 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (86.508 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (15.079 % of family members)
Environment Ontology (ENVO)	Unclassified (57.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (75.397 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.59% β-sheet: 14.53% Coil/Unstructured: 41.88%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF03401	TctC	26.98
PF00775	Dioxygenase_C	13.49
PF10282	Lactonase	3.17
PF13649	Methyltransf_25	2.38
PF02910	Succ_DH_flav_C	1.59
PF00903	Glyoxalase	1.59
PF08241	Methyltransf_11	0.79
PF02615	Ldh_2	0.79
PF02353	CMAS	0.79
PF13847	Methyltransf_31	0.79
PF13376	OmdA	0.79
PF06808	DctM	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	26.98
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	13.49
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.79
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.79
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.79
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.51 %
Unclassified	root	N/A	13.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.51 %
Unclassified	root	N/A	13.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.51 %
Unclassified	root	N/A	13.49 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.11 %
Unclassified	root	N/A	13.49 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.59 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	42.86 %
Unclassified	root	N/A	13.49 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	26.19 %
Unclassified	root	N/A	13.49 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.79 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.49 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	11.11 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.79 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.79 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.49 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	11.11 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.79 %
Kluyvera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Kluyvera	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.49 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	11.11 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.79 %
Kluyvera ascorbata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Kluyvera → Kluyvera ascorbata	0.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.49 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	11.11 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.79 %
Streptomyces tsukubensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces tsukubensis	0.79 %
Kluyvera ascorbata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Kluyvera → Kluyvera ascorbata	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002128\|JGI24036J26619_10098285	Not Available	595	Open in IMG/M
3300004114\|Ga0062593_100665956	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300004157\|Ga0062590_101393048	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300004463\|Ga0063356_103705006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	658	Open in IMG/M
3300004643\|Ga0062591_100557324	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300005290\|Ga0065712_10376788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Kluyvera → Kluyvera ascorbata	757	Open in IMG/M
3300005293\|Ga0065715_10268313	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300005293\|Ga0065715_10462942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	810	Open in IMG/M
3300005294\|Ga0065705_10675436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	660	Open in IMG/M
3300005328\|Ga0070676_11000612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	627	Open in IMG/M
3300005328\|Ga0070676_11069042	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300005331\|Ga0070670_100162726	All Organisms → cellular organisms → Bacteria → Proteobacteria	1934	Open in IMG/M
3300005331\|Ga0070670_100486316	All Organisms → cellular organisms → Bacteria → Proteobacteria	1096	Open in IMG/M
3300005331\|Ga0070670_101497643	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300005333\|Ga0070677_10087572	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300005333\|Ga0070677_10341017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	773	Open in IMG/M
3300005334\|Ga0068869_100448133	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300005335\|Ga0070666_10304444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1135	Open in IMG/M
3300005338\|Ga0068868_100142843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1966	Open in IMG/M
3300005340\|Ga0070689_100519242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300005345\|Ga0070692_10150119	All Organisms → cellular organisms → Bacteria → Proteobacteria	1327	Open in IMG/M
3300005347\|Ga0070668_100036633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3744	Open in IMG/M
3300005353\|Ga0070669_100225684	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300005354\|Ga0070675_101400839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	644	Open in IMG/M
3300005355\|Ga0070671_100557315	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005355\|Ga0070671_100560653	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300005356\|Ga0070674_100073134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2429	Open in IMG/M
3300005356\|Ga0070674_100737355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	845	Open in IMG/M
3300005364\|Ga0070673_100307907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1396	Open in IMG/M
3300005365\|Ga0070688_100051655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2565	Open in IMG/M
3300005366\|Ga0070659_101987183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces tsukubensis	522	Open in IMG/M
3300005441\|Ga0070700_100248797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1274	Open in IMG/M
3300005456\|Ga0070678_101113355	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300005466\|Ga0070685_10824116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	686	Open in IMG/M
3300005543\|Ga0070672_100171179	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300005548\|Ga0070665_100178168	All Organisms → cellular organisms → Bacteria → Proteobacteria	2126	Open in IMG/M
3300005577\|Ga0068857_100158539	All Organisms → cellular organisms → Bacteria → Proteobacteria	2053	Open in IMG/M
3300005578\|Ga0068854_100084645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2347	Open in IMG/M
3300005615\|Ga0070702_100576263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	840	Open in IMG/M
3300005617\|Ga0068859_100133495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2554	Open in IMG/M
3300005718\|Ga0068866_10777287	Not Available	664	Open in IMG/M
3300005841\|Ga0068863_100425891	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300005844\|Ga0068862_101943860	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300006237\|Ga0097621_100502337	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300006358\|Ga0068871_100255192	All Organisms → cellular organisms → Bacteria → Proteobacteria	1528	Open in IMG/M
3300006871\|Ga0075434_101214221	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300006880\|Ga0075429_100617840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	950	Open in IMG/M
3300009094\|Ga0111539_10588939	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300009176\|Ga0105242_10064518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3019	Open in IMG/M
3300009177\|Ga0105248_10204499	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300009177\|Ga0105248_12750108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	561	Open in IMG/M
3300009553\|Ga0105249_10281390	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300010397\|Ga0134124_10300425	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300010403\|Ga0134123_10209221	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300011119\|Ga0105246_10182849	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300012885\|Ga0157287_1088515	Not Available	556	Open in IMG/M
3300012892\|Ga0157294_10238624	Not Available	554	Open in IMG/M
3300012893\|Ga0157284_10154163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	655	Open in IMG/M
3300012897\|Ga0157285_10250250	Not Available	581	Open in IMG/M
3300012901\|Ga0157288_10071961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	869	Open in IMG/M
3300012905\|Ga0157296_10054652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	953	Open in IMG/M
3300012908\|Ga0157286_10097289	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012913\|Ga0157298_10112591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	757	Open in IMG/M
3300012914\|Ga0157297_10285887	Not Available	614	Open in IMG/M
3300012984\|Ga0164309_11032392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	680	Open in IMG/M
3300013297\|Ga0157378_10639092	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300013306\|Ga0163162_10158709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2383	Open in IMG/M
3300013308\|Ga0157375_11824991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	721	Open in IMG/M
3300014325\|Ga0163163_11478095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	741	Open in IMG/M
3300014745\|Ga0157377_10782475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	702	Open in IMG/M
3300014745\|Ga0157377_11614354	Not Available	520	Open in IMG/M
3300014968\|Ga0157379_10166028	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300014969\|Ga0157376_10872102	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300014969\|Ga0157376_11175321	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300015200\|Ga0173480_10713496	Not Available	630	Open in IMG/M
3300015201\|Ga0173478_10057091	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300015372\|Ga0132256_100404215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1468	Open in IMG/M
3300015374\|Ga0132255_102214863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	838	Open in IMG/M
3300017792\|Ga0163161_10119325	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300017965\|Ga0190266_10001449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4452	Open in IMG/M
3300018067\|Ga0184611_1117809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	930	Open in IMG/M
3300018073\|Ga0184624_10183768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	929	Open in IMG/M
3300018083\|Ga0184628_10228787	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300018476\|Ga0190274_13196154	Not Available	551	Open in IMG/M
3300019356\|Ga0173481_10358769	Not Available	699	Open in IMG/M
3300019362\|Ga0173479_10423046	Not Available	649	Open in IMG/M
3300020034\|Ga0193753_10219059	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300021082\|Ga0210380_10183017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	944	Open in IMG/M
3300022886\|Ga0247746_1111785	Not Available	675	Open in IMG/M
3300025315\|Ga0207697_10017585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2937	Open in IMG/M
3300025893\|Ga0207682_10005335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5247	Open in IMG/M
3300025899\|Ga0207642_10133679	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300025901\|Ga0207688_10003994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8035	Open in IMG/M
3300025903\|Ga0207680_10058341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2339	Open in IMG/M
3300025907\|Ga0207645_10003360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12184	Open in IMG/M
3300025908\|Ga0207643_10019228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3742	Open in IMG/M
3300025918\|Ga0207662_10141906	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300025923\|Ga0207681_10207982	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300025926\|Ga0207659_10098046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2203	Open in IMG/M
3300025930\|Ga0207701_10189071	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300025930\|Ga0207701_10226024	All Organisms → cellular organisms → Bacteria → Proteobacteria	1638	Open in IMG/M
3300025931\|Ga0207644_10092612	All Organisms → cellular organisms → Bacteria	2255	Open in IMG/M
3300025931\|Ga0207644_10812192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	782	Open in IMG/M
3300025934\|Ga0207686_10060085	All Organisms → cellular organisms → Bacteria → Proteobacteria	2404	Open in IMG/M
3300025936\|Ga0207670_10264412	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300025937\|Ga0207669_11599890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	556	Open in IMG/M
3300025941\|Ga0207711_10009761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7985	Open in IMG/M
3300025960\|Ga0207651_10028113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3542	Open in IMG/M
3300025960\|Ga0207651_10391275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1180	Open in IMG/M
3300025972\|Ga0207668_10158868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1759	Open in IMG/M
3300025986\|Ga0207658_10511764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1070	Open in IMG/M
3300026023\|Ga0207677_12207514	Not Available	512	Open in IMG/M
3300026067\|Ga0207678_10794822	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300026075\|Ga0207708_10033100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3926	Open in IMG/M
3300026089\|Ga0207648_10019376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6141	Open in IMG/M
3300026116\|Ga0207674_10069330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3547	Open in IMG/M
3300026118\|Ga0207675_100018519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6494	Open in IMG/M
3300028379\|Ga0268266_10116838	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300028380\|Ga0268265_10421454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1239	Open in IMG/M
3300028380\|Ga0268265_11068061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	800	Open in IMG/M
3300028802\|Ga0307503_10058856	Not Available	1499	Open in IMG/M
3300031716\|Ga0310813_10924076	Not Available	792	Open in IMG/M
3300031854\|Ga0310904_11189883	Not Available	549	Open in IMG/M
3300034149\|Ga0364929_0046060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1317	Open in IMG/M
3300034150\|Ga0364933_011541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2052	Open in IMG/M
3300034268\|Ga0372943_0880643	Not Available	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	63.49%
Environmental	Environmental	36.51%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	63.49%
Terrestrial	Environmental → Terrestrial	33.33%
Aquatic	Environmental → Aquatic	3.17%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.48%
Soil	Environmental → Terrestrial → Soil	31.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.63%
Sediment	Environmental → Aquatic → Sediment	2.38%
Roots	Host-Associated → Plants → Roots	2.38%
Floodplain	Environmental → Terrestrial → Floodplain	1.59%
Freshwater	Environmental → Aquatic → Freshwater	0.79%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	26.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.49%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.38%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	26.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.38%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	15.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	9.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24036J26619_100982852	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATG
Ga0062593_1006659562	3300004114	Soil	MIKYLQWFGPSASFSTRARSLDLSLCILILAGCATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0062590_1013930481	3300004157	Soil	MQSARDNTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN*
Ga0063356_1037050062	3300004463	Arabidopsis Thaliana Rhizosphere	AMTSSMQSARDNTATGSAPACPAVMRSLGLSLFVLFVTACATGARDDFKLRRDIAGLHLVKMPLEDAKSRLAARGFVCEKDTVPYEGSLLRSLYCVRTIAGIGCRDDEHVTLEYSVESSLVDRFATGRKNGCN*
Ga0062591_1005573242	3300004643	Soil	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN*
Ga0065712_103767881	3300005290	Miscanthus Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0065715_102683132	3300005293	Miscanthus Rhizosphere	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKYTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGR
Ga0065715_104629422	3300005293	Miscanthus Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0065705_106754361	3300005294	Switchgrass Rhizosphere	ACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070676_110006122	3300005328	Miscanthus Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLE
Ga0070676_110690421	3300005328	Miscanthus Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLE
Ga0070670_1001627262	3300005331	Switchgrass Rhizosphere	MTSPMQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN*
Ga0070670_1004863162	3300005331	Switchgrass Rhizosphere	MQSARDNTAAGSAPAFSAAVRSLTLALFILFVSACATGARDDFKLRRDIDGLHLVKMPIDGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070670_1014976432	3300005331	Switchgrass Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLE
Ga0070677_100875722	3300005333	Miscanthus Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070677_103410172	3300005333	Miscanthus Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGLGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0068869_1004481331	3300005334	Miscanthus Rhizosphere	NTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN*
Ga0070666_103044442	3300005335	Switchgrass Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0068868_1001428431	3300005338	Miscanthus Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070689_1005192421	3300005340	Switchgrass Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070692_101501192	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070668_1000366332	3300005347	Switchgrass Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070669_1002256843	3300005353	Switchgrass Rhizosphere	MQSARDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070675_1014008391	3300005354	Miscanthus Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTL
Ga0070671_1005573151	3300005355	Switchgrass Rhizosphere	MQSARDNIASSLGVSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070671_1005606532	3300005355	Switchgrass Rhizosphere	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEY
Ga0070674_1000731342	3300005356	Miscanthus Rhizosphere	MTSPMQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070674_1007373552	3300005356	Miscanthus Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSAYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070673_1003079072	3300005364	Switchgrass Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070688_1000516555	3300005365	Switchgrass Rhizosphere	MTSPMQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070659_1019871831	3300005366	Corn Rhizosphere	MQSARDNIASGLGVSLFILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070700_1002487972	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070678_1011133552	3300005456	Miscanthus Rhizosphere	LSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN*
Ga0070685_108241161	3300005466	Switchgrass Rhizosphere	CATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070672_1001711792	3300005543	Miscanthus Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0070665_1001781683	3300005548	Switchgrass Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0068857_1001585391	3300005577	Corn Rhizosphere	SARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0068854_1000846452	3300005578	Corn Rhizosphere	MTSPMQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0070702_1005762631	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MQSARDNIASSLGVSLLILLGSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0068859_1001334955	3300005617	Switchgrass Rhizosphere	ACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0068866_107772872	3300005718	Miscanthus Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0068863_1004258912	3300005841	Switchgrass Rhizosphere	MTSPMQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0068862_1019438602	3300005844	Switchgrass Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTL
Ga0097621_1005023373	3300006237	Miscanthus Rhizosphere	MTSPIQSARDNIASRLGVSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0068871_1002551923	3300006358	Miscanthus Rhizosphere	MTSPMQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0075434_1012142212	3300006871	Populus Rhizosphere	MQSARDNIASRLGVSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSAYCVRTIKGIGCRDDEHVTLEYVAESSPVDRFATGCKNGCN*
Ga0075429_1006178402	3300006880	Populus Rhizosphere	MQSARDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0111539_105889392	3300009094	Populus Rhizosphere	MQSARDNIASSLGVSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0105242_100645185	3300009176	Miscanthus Rhizosphere	MQSARENTARSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0105248_102044991	3300009177	Switchgrass Rhizosphere	MQLARESTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLIKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN*
Ga0105248_127501082	3300009177	Switchgrass Rhizosphere	MRLGFCVIALFIAGCATGPRDDFKLRRDIAGLNLVKMPITDAGARLGGQGFTCEKDTEPYAGSLLRSVYCVRVIPGIGCKDDEHVTLEFRADSSLVERVTTGRKNGCN*
Ga0105249_102813903	3300009553	Switchgrass Rhizosphere	MQSARDNIASRLGVSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0134124_103004253	3300010397	Terrestrial Soil	GLSLLILLVSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0134123_102092211	3300010403	Terrestrial Soil	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0105246_101828492	3300011119	Miscanthus Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157287_10885152	3300012885	Soil	FGPSASLSTRARRLGLSLCILILAGCAIGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157294_102386241	3300012892	Soil	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIKGLGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157284_101541631	3300012893	Soil	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSAYCVRTIKGIGCRDDEHVTLEYVAE
Ga0157285_102502501	3300012897	Soil	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157288_100719612	3300012901	Soil	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSAYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157296_100546522	3300012905	Soil	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157286_100972891	3300012908	Soil	MQLARESTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157298_101125912	3300012913	Soil	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157297_102858871	3300012914	Soil	NLRVACGRKAAPVMIKYLQWFGPSASFSTRARSLDLSLCILILAGCAIGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRYDEHVTLEYFAESSLVDRFATGRKNGCN*
Ga0164309_110323921	3300012984	Soil	MQLARESTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0157378_106390923	3300013297	Miscanthus Rhizosphere	MQSARDNIASRLGVSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0163162_101587092	3300013306	Switchgrass Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIESAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157375_118249911	3300013308	Miscanthus Rhizosphere	MQSARDNIASRLGVSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRADEPVTLEYVAESSLVDRFASGRKNGCN*
Ga0163163_114780952	3300014325	Switchgrass Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFA
Ga0157377_107824752	3300014745	Miscanthus Rhizosphere	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0157377_116143541	3300014745	Miscanthus Rhizosphere	MTSPMQSARDNTAAGSAPAFSAAVRSLTLALFILFVSACATGARDDFKLRRDIDGLHLVKMPIDGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0157379_101660283	3300014968	Switchgrass Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0157376_108721022	3300014969	Miscanthus Rhizosphere	MISNVMRLGFCVIALFIAGCATGPRDDFKLRRDIAGLNLVKMPITDAGARLGGQGFTCEKDTEPYAGSLLRSVYCVRVIPGIGCKDDEHVTLEFRADSSLVERVTTGRKNGCN*
Ga0157376_111753211	3300014969	Miscanthus Rhizosphere	MQSARENTTSSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN*
Ga0173480_107134962	3300015200	Soil	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGLGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0173478_100570912	3300015201	Soil	MQSAKDNTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0132256_1004042152	3300015372	Arabidopsis Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSAYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN*
Ga0132255_1022148632	3300015374	Arabidopsis Rhizosphere	MQSARDNTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN*
Ga0163161_101193252	3300017792	Switchgrass Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSAYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0190266_100014492	3300017965	Soil	MTLPMQSARENTTSSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKTRLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGC
Ga0184611_11178092	3300018067	Groundwater Sediment	MTSSMQLARESTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKYTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGC
Ga0184624_101837682	3300018073	Groundwater Sediment	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN
Ga0184628_102287871	3300018083	Groundwater Sediment	SSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN
Ga0190274_131961542	3300018476	Soil	ESLRDACDEKATPVMSHYLMWFVPPANFSTRARSLGLSLCILSLAACATGARDDFKLRRDIDGLHLVKMSIEGAKARLATHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYSVESSLVDRFATGRKNGCN
Ga0173481_103587691	3300019356	Soil	MQSARENTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN
Ga0173479_104230461	3300019362	Soil	MQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN
Ga0193753_102190592	3300020034	Soil	MRISFWIIAACISACATGPRDDYKLRRDIAGLNLVKMPITDARTRLAGQGFACEKETEPYAGSLHKSVYCARVIPGIGCKDDEHVTLEFRADTGLVERVTTGRKNGCN
Ga0210380_101830172	3300021082	Groundwater Sediment	LSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN
Ga0247746_11117851	3300022886	Soil	MIKYLQWFGPSASFSTRARSLDLSLCILILAGCATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN
Ga0207697_100175854	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPMQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGC
Ga0207682_100053356	3300025893	Miscanthus Rhizosphere	MTSPMQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGC
Ga0207642_101336792	3300025899	Miscanthus Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0207688_100039947	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPMQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGC
Ga0207680_100583413	3300025903	Switchgrass Rhizosphere	MQSARDNIASSLGVSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASG
Ga0207645_100033608	3300025907	Miscanthus Rhizosphere	LSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN
Ga0207643_100192284	3300025908	Miscanthus Rhizosphere	MTSPMQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGC
Ga0207662_101419063	3300025918	Switchgrass Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0207681_102079821	3300025923	Switchgrass Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN
Ga0207659_100980461	3300025926	Miscanthus Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNG
Ga0207701_101890712	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPMQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGC
Ga0207701_102260241	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MIKYLQWFGPSASFSTRARSLDLSLCILILAGCATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYV
Ga0207644_100926124	3300025931	Switchgrass Rhizosphere	MQSARENTARSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN
Ga0207644_108121922	3300025931	Switchgrass Rhizosphere	LGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0207686_100600854	3300025934	Miscanthus Rhizosphere	LSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0207670_102644121	3300025936	Switchgrass Rhizosphere	MTSPMQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGC
Ga0207669_115998902	3300025937	Miscanthus Rhizosphere	QSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN
Ga0207711_100097612	3300025941	Switchgrass Rhizosphere	MTSPMQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGC
Ga0207651_100281133	3300025960	Switchgrass Rhizosphere	MTSPMQSARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGC
Ga0207651_103912752	3300025960	Switchgrass Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0207668_101588683	3300025972	Switchgrass Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRK
Ga0207658_105117643	3300025986	Switchgrass Rhizosphere	TSPMQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0207677_122075141	3300026023	Miscanthus Rhizosphere	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRK
Ga0207678_107948222	3300026067	Corn Rhizosphere	VSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0207708_100331005	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPMQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGC
Ga0207648_100193763	3300026089	Miscanthus Rhizosphere	MTSPMQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGC
Ga0207674_100693306	3300026116	Corn Rhizosphere	MTSPMQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGC
Ga0207675_1000185198	3300026118	Switchgrass Rhizosphere	MTSPMQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGC
Ga0268266_101168383	3300028379	Switchgrass Rhizosphere	MQSARDNIASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAANGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0268265_104214542	3300028380	Switchgrass Rhizosphere	MQSAKDNTASSLGLSLLILLGSACATGARDDFKLRRDIDGLHLVKLPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFASGRKNGCN
Ga0268265_110680611	3300028380	Switchgrass Rhizosphere	ARENTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIRGIGCRDDEHVTLEYGAESSLVDRFATGRKNGCN
Ga0307503_100588561	3300028802	Soil	MQLARESTASSLGLSLLILLVSACATGARDDFKLRRDIDGLHLVKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRK
Ga0310813_109240762	3300031716	Soil	MQSARDNTAAGSAPAFSAAVRSLTLALFILFVSACATGARDDFKLRRDIDGLHLVKMPIDGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIKG
Ga0310904_111898831	3300031854	Soil	MQSARDNTASRLGLSLLILLVSACATGARDDFKLRRDIDGLHLAKMPIEGAKARLAAHGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRF
Ga0364929_0046060_405_758	3300034149	Sediment	MQLARESTASSLGLSLLILLVSACATGARDDFKLRRDIAGLHLVKMPIEGAKARLAAQGFVCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDQFATGRKNGCN
Ga0364933_011541_579_932	3300034150	Sediment	MQLARESTASSLGLSLLILLVSACATGARDDFKLRRDIAGLHLVKMPIEGAKARLAAHGFLCEKDTVPYEGSFLRSVYCVRTIKGIGCRDDEHVTLEYVAESSLVDRFATGRKNGCN
Ga0372943_0880643_253_579	3300034268	Soil	MRVTLCLIALIFSGCATGPRDDYKLRRDIADLHIVNMPIEEARALLAGRAFICEKDTVPYEGSFLRAVYCARPVQGIGCRDDEHVTLEYRLDTKLVDRVASGRKNGCN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066880

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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