Metagenome / Metatranscriptome Family F066798

Basic Information
Family ID	F066798
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	85 residues
Representative Sequence	INPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Number of Associated Samples	94
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.57 %
% of genes near scaffold ends (potentially truncated)	45.24 %
% of genes from short scaffolds (< 2000 bps)	92.06 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Most Common Taxonomy
Group	Bacteria (50.794 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (10.318 % of family members)
Environment Ontology (ENVO)	Unclassified (56.349 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.841 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.67% β-sheet: 0.00% Coil/Unstructured: 33.33%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.47.2.1: t-snare proteins	d1vcsa1	1vcs	0.77857
f.13.1.0: automated matches	d4hyja_	4hyj	0.77345
a.207.1.1: Formin homology 2 domain (FH2 domain)	d1v9da_	1v9d	0.76781
a.24.2.0: automated matches	d4z9ha_	4z9h	0.7672
a.215.1.1: A middle domain of Talin 1	d1sj7a1	1sj7	0.76441

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF12244	DUF3606	47.62
PF06150	ChaB	8.73
PF03473	MOSC	3.97
PF04542	Sigma70_r2	3.17
PF08281	Sigma70_r4_2	2.38
PF08546	ApbA_C	1.59
PF00082	Peptidase_S8	1.59
PF00719	Pyrophosphatase	0.79
PF00497	SBP_bac_3	0.79
PF05690	ThiG	0.79
PF02597	ThiS	0.79
PF03466	LysR_substrate	0.79
PF16881	LIAS_N	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG4572	Cation transport regulator ChaB	Inorganic ion transport and metabolism [P]	8.73
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	3.17
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	3.17
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	3.17
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	3.17
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	1.59
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	0.79
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.79
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.79
COG2022	Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis)	Coenzyme transport and metabolism [H]	0.79
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.79
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.79 %
Unclassified	root	N/A	49.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.79 %
Unclassified	root	N/A	49.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.79 %
Unclassified	root	N/A	49.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.49 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7.94 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	4.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.21 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	4.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.59 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.21 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	4.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.59 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.21 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	4.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.59 %
Aromatoleum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.21 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	4.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.59 %
unclassified Aromatoleum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.21 %
Deinococcus hopiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis	4.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.59 %
Aromatoleum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.21 %
Deinococcus hopiensis KR-140	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis → Deinococcus hopiensis KR-140	4.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.59 %
Aromatoleum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003319\|soilL2_10118330	Not Available	1116	Open in IMG/M
3300004798\|Ga0058859_11020213	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005093\|Ga0062594_100851522	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005093\|Ga0062594_101206212	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005329\|Ga0070683_101237944	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005331\|Ga0070670_100209477	Not Available	1695	Open in IMG/M
3300005331\|Ga0070670_100861666	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005331\|Ga0070670_102233552	Not Available	504	Open in IMG/M
3300005333\|Ga0070677_10035029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1943	Open in IMG/M
3300005339\|Ga0070660_101082664	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005340\|Ga0070689_100288423	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300005347\|Ga0070668_100106622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2226	Open in IMG/M
3300005353\|Ga0070669_100148737	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300005354\|Ga0070675_100310766	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300005356\|Ga0070674_100620236	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300005364\|Ga0070673_101872812	Not Available	569	Open in IMG/M
3300005367\|Ga0070667_100588661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis → Deinococcus hopiensis KR-140	1024	Open in IMG/M
3300005367\|Ga0070667_100612102	Not Available	1004	Open in IMG/M
3300005367\|Ga0070667_101445528	Not Available	645	Open in IMG/M
3300005441\|Ga0070700_100564541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis → Deinococcus hopiensis KR-140	886	Open in IMG/M
3300005441\|Ga0070700_101165376	Not Available	642	Open in IMG/M
3300005456\|Ga0070678_100462965	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300005539\|Ga0068853_102391915	Not Available	512	Open in IMG/M
3300005543\|Ga0070672_101110672	Not Available	703	Open in IMG/M
3300005548\|Ga0070665_100169100	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300005564\|Ga0070664_100726528	Not Available	926	Open in IMG/M
3300005616\|Ga0068852_100611892	Not Available	1094	Open in IMG/M
3300005616\|Ga0068852_100808658	Not Available	952	Open in IMG/M
3300005617\|Ga0068859_100531287	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005617\|Ga0068859_101497081	Not Available	745	Open in IMG/M
3300005719\|Ga0068861_100882198	Not Available	846	Open in IMG/M
3300005719\|Ga0068861_102492264	Not Available	521	Open in IMG/M
3300005841\|Ga0068863_100177450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2044	Open in IMG/M
3300005841\|Ga0068863_100891126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis → Deinococcus hopiensis KR-140	890	Open in IMG/M
3300005843\|Ga0068860_100089512	All Organisms → cellular organisms → Bacteria → Proteobacteria	2930	Open in IMG/M
3300005843\|Ga0068860_101815506	Not Available	631	Open in IMG/M
3300005843\|Ga0068860_102035715	Not Available	596	Open in IMG/M
3300005844\|Ga0068862_100496366	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300006417\|Ga0069787_13047009	Not Available	512	Open in IMG/M
3300006755\|Ga0079222_10846162	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300006806\|Ga0079220_10368797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	922	Open in IMG/M
3300006844\|Ga0075428_102514408	Not Available	527	Open in IMG/M
3300006854\|Ga0075425_100276189	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300006904\|Ga0075424_100735274	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300009094\|Ga0111539_10396545	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300009094\|Ga0111539_12994163	Not Available	546	Open in IMG/M
3300009156\|Ga0111538_12583144	Not Available	637	Open in IMG/M
3300009162\|Ga0075423_13049269	Not Available	513	Open in IMG/M
3300009551\|Ga0105238_12983159	Not Available	508	Open in IMG/M
3300009553\|Ga0105249_10294263	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300009840\|Ga0126313_11860181	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009870\|Ga0131092_10562182	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300010051\|Ga0133939_1000017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	248688	Open in IMG/M
3300010154\|Ga0127503_10028425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis → Deinococcus hopiensis KR-140	1263	Open in IMG/M
3300011332\|Ga0126317_10400737	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012212\|Ga0150985_105820776	Not Available	885	Open in IMG/M
3300012212\|Ga0150985_109629525	Not Available	1236	Open in IMG/M
3300012212\|Ga0150985_116385936	Not Available	638	Open in IMG/M
3300012212\|Ga0150985_120810051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis → Deinococcus hopiensis KR-140	931	Open in IMG/M
3300012469\|Ga0150984_107812470	Not Available	566	Open in IMG/M
3300012469\|Ga0150984_108800948	Not Available	547	Open in IMG/M
3300012902\|Ga0157291_10342504	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012988\|Ga0164306_11242699	Not Available	627	Open in IMG/M
3300013306\|Ga0163162_10261501	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300013306\|Ga0163162_12304062	Not Available	619	Open in IMG/M
3300013308\|Ga0157375_10276732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1841	Open in IMG/M
3300013308\|Ga0157375_11147906	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300013308\|Ga0157375_11352024	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300014325\|Ga0163163_10862705	Not Available	969	Open in IMG/M
3300014745\|Ga0157377_10584592	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300014969\|Ga0157376_13080246	Not Available	505	Open in IMG/M
3300015077\|Ga0173483_10713701	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300015371\|Ga0132258_10373001	All Organisms → cellular organisms → Bacteria → Proteobacteria	3536	Open in IMG/M
3300015371\|Ga0132258_12999554	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300015374\|Ga0132255_104204800	Not Available	611	Open in IMG/M
3300017792\|Ga0163161_11348924	Not Available	621	Open in IMG/M
3300018060\|Ga0187765_10145715	Not Available	1332	Open in IMG/M
3300018476\|Ga0190274_10810549	Not Available	994	Open in IMG/M
3300018476\|Ga0190274_11649668	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300018476\|Ga0190274_12708711	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300018481\|Ga0190271_10602657	All Organisms → cellular organisms → Bacteria → Proteobacteria	1217	Open in IMG/M
3300018481\|Ga0190271_11991087	Not Available	690	Open in IMG/M
3300018481\|Ga0190271_12812178	Not Available	584	Open in IMG/M
3300019356\|Ga0173481_10781854	Not Available	525	Open in IMG/M
(restricted) 3300021517\|Ga0224723_1120110	Not Available	815	Open in IMG/M
3300025321\|Ga0207656_10043688	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300025893\|Ga0207682_10079780	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300025893\|Ga0207682_10258411	Not Available	812	Open in IMG/M
3300025899\|Ga0207642_10931425	Not Available	557	Open in IMG/M
3300025901\|Ga0207688_10173438	Not Available	1283	Open in IMG/M
3300025901\|Ga0207688_10465930	Not Available	789	Open in IMG/M
3300025926\|Ga0207659_10514903	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300025933\|Ga0207706_10219770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1664	Open in IMG/M
3300025937\|Ga0207669_10621740	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300025961\|Ga0207712_10146136	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300025981\|Ga0207640_11832704	Not Available	549	Open in IMG/M
3300025986\|Ga0207658_10269818	Not Available	1454	Open in IMG/M
3300025986\|Ga0207658_10383501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis → Deinococcus hopiensis KR-140	1231	Open in IMG/M
3300025986\|Ga0207658_12115019	Not Available	511	Open in IMG/M
3300026023\|Ga0207677_10703467	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300026041\|Ga0207639_11402592	Not Available	656	Open in IMG/M
3300026088\|Ga0207641_10196846	All Organisms → cellular organisms → Bacteria → Proteobacteria	1855	Open in IMG/M
3300026142\|Ga0207698_11134087	Not Available	795	Open in IMG/M
3300028380\|Ga0268265_10098046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2360	Open in IMG/M
3300028381\|Ga0268264_10416129	Not Available	1295	Open in IMG/M
3300028587\|Ga0247828_10226482	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300030783\|Ga0102752_1389783	Not Available	517	Open in IMG/M
3300031082\|Ga0308192_1092887	Not Available	505	Open in IMG/M
3300031092\|Ga0308204_10125861	Not Available	735	Open in IMG/M
3300031548\|Ga0307408_101108100	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031548\|Ga0307408_101402961	Not Available	658	Open in IMG/M
3300031731\|Ga0307405_10950749	Not Available	730	Open in IMG/M
3300031938\|Ga0308175_100481340	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300031939\|Ga0308174_11039692	Not Available	695	Open in IMG/M
3300031996\|Ga0308176_10940656	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300031996\|Ga0308176_11741571	Not Available	665	Open in IMG/M
3300032074\|Ga0308173_10113460	All Organisms → cellular organisms → Bacteria	2132	Open in IMG/M
3300032126\|Ga0307415_101839383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	587	Open in IMG/M
3300032770\|Ga0335085_12132724	Not Available	565	Open in IMG/M
3300032782\|Ga0335082_10045110	All Organisms → cellular organisms → Bacteria → Proteobacteria	4598	Open in IMG/M
3300032829\|Ga0335070_11357649	Not Available	650	Open in IMG/M
3300032893\|Ga0335069_10305508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	1892	Open in IMG/M
3300032893\|Ga0335069_10775980	Not Available	1082	Open in IMG/M
3300032954\|Ga0335083_10000531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	57671	Open in IMG/M
3300032955\|Ga0335076_11643491	Not Available	531	Open in IMG/M
3300034165\|Ga0364942_0118880	Not Available	858	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	65.08%
Environmental	Environmental	32.54%
Engineered	Engineered	2.38%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	64.29%
Terrestrial	Environmental → Terrestrial	30.16%
Aquatic	Environmental → Aquatic	2.38%
Wastewater	Engineered → Wastewater	2.38%
Human	Host-Associated → Human	0.79%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.71%
Soil	Environmental → Terrestrial → Soil	29.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	27.78%
Freshwater	Environmental → Aquatic → Freshwater	2.38%
Floodplain	Environmental → Terrestrial → Floodplain	0.79%
Digestive System	Host-Associated → Human → Digestive System	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.79%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.79%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.79%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.56%
Loam	Environmental → Terrestrial → Soil → Loam	3.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.59%
Lake	Environmental → Aquatic → Freshwater → Lake	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.79%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.79%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.79%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.59%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.79%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.79%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Activated Sludge	0.79%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	10.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.38%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.79%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.79%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.79%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater	0.79%
Enhanced Biological Phosphorus Removal Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Activated Sludge → Enhanced Biological Phosphorus Removal Bioreactor	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006417	Combined Assembly of Gp0110018, Gp0110022, Gp0110020	Engineered	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010051	Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196	Engineered	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021517 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR2_MetaG	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300030783	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 3C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
soilL2_101183302	3300003319	Sugarcane Root And Bulk Soil	MLEAMAEARALNESGEKGRQFRRCLQVARDNYDRLLAELITAEPSTAQYARGLADSMGNHLTELERLLEPSPSQREV*
Ga0058859_110202133	3300004798	Host-Associated	GRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM
Ga0062594_1008515223	3300005093	Soil	MLEAMAEARALNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM*
Ga0062594_1012062121	3300005093	Soil	AEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070683_1012379441	3300005329	Corn Rhizosphere	PLSNPDTMARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070670_1002094773	3300005331	Switchgrass Rhizosphere	MARTPLNPEELARISGAMLQAMAEARALNEAGDTGARFCECVSQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAESRLH*
Ga0070670_1008616664	3300005331	Switchgrass Rhizosphere	KGRQFRRCLQVARDNYDRLLAELITAEPSTAQYARGLADSMGNHLNELERLVEPTPSRGEM*
Ga0070670_1022335522	3300005331	Switchgrass Rhizosphere	MLAAMAEARALNDAGEKGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASS
Ga0070677_100350294	3300005333	Miscanthus Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070660_1010826643	3300005339	Corn Rhizosphere	SINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070689_1002884234	3300005340	Switchgrass Rhizosphere	LNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM*
Ga0070668_1001066223	3300005347	Switchgrass Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070669_1001487376	3300005353	Switchgrass Rhizosphere	MLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070675_1003107664	3300005354	Miscanthus Rhizosphere	ALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070674_1006202361	3300005356	Miscanthus Rhizosphere	DGTPILESFRPRSLERGMLEAMAEARALNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM*
Ga0070673_1018728122	3300005364	Switchgrass Rhizosphere	LRRERLSNPDTMARQSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070667_1005886611	3300005367	Switchgrass Rhizosphere	NPDTMARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070667_1006121021	3300005367	Switchgrass Rhizosphere	MLQAMAEARALDEAGDHGKRFCACVNLARDNYDRLLAQLISAEPTTAQYARGLADSMGNHLGELERLLESPSDSVE*
Ga0070667_1014455282	3300005367	Switchgrass Rhizosphere	MLQAMAEARTLNEAGDHGKRFCACVNIARDNYDRLLAQLISAEPATAQYARGLADSMGNHLSELE
Ga0070700_1005645411	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PDTMARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070700_1011653762	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SGAMLQAMAEARALNEAGDTGARFCECVSQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAESRLH*
Ga0070678_1004629654	3300005456	Miscanthus Rhizosphere	MLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSDLERLADPASSQREM*
Ga0068853_1023919151	3300005539	Corn Rhizosphere	MLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070672_1011106723	3300005543	Miscanthus Rhizosphere	MARHHINPEELAKICGAMLQAMAEARTLMEAGDLGDQFRARLTLARDSYDRLLAHLISAEPSTAQYARGLADSMGNHLAELEAALAPSTSDMH*
Ga0070665_1001691002	3300005548	Switchgrass Rhizosphere	MARQSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0070664_1007265282	3300005564	Corn Rhizosphere	MLAAMAEARALNDSGERGRQFRRCLEIARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLGELERLADSTSSQREM*
Ga0068852_1006118922	3300005616	Corn Rhizosphere	MLEAMAEARALNEAGEKGRRFRRCIEVARDNYDRLLAQLIAAEPSTAQYARGLADSMGNHLSELERLADPASSQREM*
Ga0068852_1008086581	3300005616	Corn Rhizosphere	LSNPDTMARHSINPSDLARLSGAMLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSDLERLADPASSQREM*
Ga0068859_1005312871	3300005617	Switchgrass Rhizosphere	ERLSNPDTMARQSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0068859_1014970812	3300005617	Switchgrass Rhizosphere	MLQAMAEARTLNEAGDHGKRFCACVNIARDNYDRLLAQLISAEPATAQYARGLADSMGNHLSELERLLEAQSDPND*
Ga0068861_1008821982	3300005719	Switchgrass Rhizosphere	MLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0068861_1024922642	3300005719	Switchgrass Rhizosphere	MARHPLNPEELARISGAMLQAMAEARALNEAGDVGARFCECVSRARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAESRLQ*
Ga0068863_1001774501	3300005841	Switchgrass Rhizosphere	MARNPLNPEELARISGAMLQAMAEARALNEAGDTGPRFCEFVSRARESYDCLLAQLISAEPTTAQYARGLADSMGNHLSELE
Ga0068863_1008911264	3300005841	Switchgrass Rhizosphere	DEAGDHGKRFCACVNLARDNYDRLLAQLISAEPTTAQYARGLADSMGNHLGELERLLESPSDSVE*
Ga0068860_1000895128	3300005843	Switchgrass Rhizosphere	MARTPLNPEELARISGAMLQAMAEARALNEAGDTGARFCECVCQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAESRLH*
Ga0068860_1018155061	3300005843	Switchgrass Rhizosphere	TGAELRRRVLSNPRTMARRSLNPSDLARLSGAMLEAMAEARALNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM*
Ga0068860_1020357152	3300005843	Switchgrass Rhizosphere	MARNPLNPEELARISGAMLQAMAEARALNEAGDTGPRFCEFVSRARESYDCLLAQLISAEPTTAQYARGLADSMGNHLSELERLLDPAESRLH*
Ga0068862_1004963661	3300005844	Switchgrass Rhizosphere	AEARALNEAGDTGARFCECVSQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAESRLH*
Ga0069787_130470091	3300006417	Enhanced Biological Phosphorus Removal Bioreactor	MLQAMAEARALTDLGDTGERFCACVSQARDSYDRLLEQLISAEPSTAQYARGLADSMGNHLTELERLLDPPAPELH*
Ga0079222_108461623	3300006755	Agricultural Soil	PSDLARLSGAMLEAMAEARALNESGEKGRQFRRCLQVARDNYDRLLAELISAEPGTAQYARGLADSMGNHLSELERLVEPSPSRHEM*
Ga0079220_103687974	3300006806	Agricultural Soil	DPVELARVSGAMLQAMAEARALNEAGDNGKRFYACVNLARDNYDRLLAQLISAEPATAQYARGLADSMGNHLSELERLLAAADGRD*
Ga0075428_1025144081	3300006844	Populus Rhizosphere	MLEAMAEARALNESGEKGRQFRRCLQVARDNYDRLLAELITAEPSTAQYARGLADSMGNHLTELERLLEPSSQREV*
Ga0075425_1002761892	3300006854	Populus Rhizosphere	MARSPINPSELARVSGAMLQAMAEARALNEAGDLGKRFHACVIAARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELEQLLEQSSQDID*
Ga0075424_1007352743	3300006904	Populus Rhizosphere	LMARSPINPSELARVSGAMLQAMAEARALNEAGDLGKRFHACVIAARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELEQLLEQSSQDID*
Ga0111539_103965455	3300009094	Populus Rhizosphere	ESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM*
Ga0111539_129941631	3300009094	Populus Rhizosphere	MARQPLNPEELARISGAMLQAMAEARALNEAGDTGARFCECVIQARESYDLLLAQLIAAEPTTAQCARGLAESMGNHLSELERLLEPAESRLH*
Ga0111538_125831442	3300009156	Populus Rhizosphere	MARNPLNPEELARISGAMLQAMAEARALNEAGDTGARFCECVNQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLE
Ga0075423_130492692	3300009162	Populus Rhizosphere	MARSPINPSELARVSGAMLQAMAEARALNEAGDLGKRFHACVIAARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELEQLLEQSSQ
Ga0105238_129831591	3300009551	Corn Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSDLERLADPASSQREM*
Ga0105249_102942632	3300009553	Switchgrass Rhizosphere	MARHPINPDDLARVSGAMLQAMAEARTLNEAGDHGKRFCACVNIARDNYDRLLAQLISAEPATAQYARGLADSMGNHLSELERLLEAQSDPND*
Ga0126313_118601812	3300009840	Serpentine Soil	SNPDTMARHSINPSDLARLSGAMLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSTSSQREM*
Ga0131092_105621821	3300009870	Activated Sludge	MLEAMAEARALNESGEKGRQFRRCLQIARDNYDRLLAELITAEPSTAQYARGLADSMGNHLSELERLVEPSPSRGEA*
Ga0133939_1000017174	3300010051	Industrial Wastewater	MARHPLDPGTLAHISGAMLQAMAEARALNAAGDTGPRFRACVSQARDSYDLLLAHLIAAEPATAQYARGLADSMGNHLMELERLLAPSASELH*
Ga0127503_100284252	3300010154	Soil	MARTPLNPEELARISGAMLQAMAEARALNDAGDTGARFCECVSQARESYDRLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAEPPLH*
Ga0126317_104007373	3300011332	Soil	MARHSINPSDLARLSGAMLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0150985_1058207762	3300012212	Avena Fatua Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSTSSQREM*
Ga0150985_1096295252	3300012212	Avena Fatua Rhizosphere	VSRNPIDPEELARISGAMLQAMAEARALNEAGDNGKRFCACINIARDNYDRLLAQLISAEPTTAQYARGLADSMGNHLGELERLLQRASSDAN*
Ga0150985_1163859361	3300012212	Avena Fatua Rhizosphere	MPRSPIDPEELARISGAMLQAMAEARALNEAGDTGKRFSACINIARDNYDRLLAQLISAEPATAQYARGLADSMGNHLGELERLLQRASSDAN*
Ga0150985_1208100511	3300012212	Avena Fatua Rhizosphere	MLEAMAEARALNESGETGRQFRRCLEIARDNYDRLLAELIAAEPATAQYARGLADSMGNHLSELERLLEPSSPREM*
Ga0150984_1078124702	3300012469	Avena Fatua Rhizosphere	MARQSLNPSDLARLSGAMLEAMAEARALNEAGEKGRRFRRCIEVARDNYDRLLAQLIAAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0150984_1088009481	3300012469	Avena Fatua Rhizosphere	MARQPINPAELARLSGAMLSAMAEAKALEESGDTGSRFHACVALARDNYDLLLEQLISAEPTTAQYARGLADSMGNHLMELEELI
Ga0157291_103425043	3300012902	Soil	EKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM*
Ga0164306_112426992	3300012988	Soil	MARQSLNPSDLARLSGAMLEAMAEARALNEAGEKGRRFRRCIEVARDNYDRLLAQLIAAEPSTAQYARGLADSMGNHLSELERLADPASSQREM*
Ga0163162_102615015	3300013306	Switchgrass Rhizosphere	AEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0163162_123040622	3300013306	Switchgrass Rhizosphere	MARSPLNPEELARISGAMLQAMAEARALNEAGDTGARFCECVNQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLS
Ga0157375_102767325	3300013308	Miscanthus Rhizosphere	LNPEELARISGAMLQAMAEARALNEAGDTGARFCECVSQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAES
Ga0157375_111479061	3300013308	Miscanthus Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELER
Ga0157375_113520243	3300013308	Miscanthus Rhizosphere	SGAMLEAMAEARALNEAGEKGRRFRRCIEVARDNYDRLLAQLIAAEPSTAQYARGLADSMGNHLSELERLADPASSQREM*
Ga0163163_108627052	3300014325	Switchgrass Rhizosphere	MARQPINPDDLARVSGAMLQAMAEARTLNEAGDHGKRFCACVNIARDNYDRLLAQLISAEPATAQYARGLADSMGNHLSELERLLEAQSDPND*
Ga0157377_105845923	3300014745	Miscanthus Rhizosphere	MARQSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM*
Ga0157376_130802462	3300014969	Miscanthus Rhizosphere	GAMLQAMAEARALNEAGDTGPRFCEFVSRARESYDCLLAQLISAEPTTAQYARGLADSMGNHLSELERLLDPAESRLH*
Ga0173483_107137011	3300015077	Soil	GEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM*
Ga0132258_103730014	3300015371	Arabidopsis Rhizosphere	MTRRSLNPSDLARFSGAMLEAMAEARALNESGEKGRQFRRCLEVARDNYDRLLAELIAAEPSTAQYARGLADSMGNHLSELERLVEPSSSRREV*
Ga0132258_129995544	3300015371	Arabidopsis Rhizosphere	GEKGRQFRRCLEVARDNYDRLLAELITAEPATAHYARGLADSMGNHLSELERLVEPSPSRHEM*
Ga0132255_1042048002	3300015374	Arabidopsis Rhizosphere	MARQQINPDELARISGAMLQAMAEARALNEAGDNGQRFAACVSAARDSYDRLLAQLIAAEPTTAQYARGLADSMGNHLSELERLLEPRME*
Ga0163161_113489242	3300017792	Switchgrass Rhizosphere	MARHPLNPEELARISGAMLQAMAEARALNEAGDTGARFCECVNQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAESRLH
Ga0187765_101457153	3300018060	Tropical Peatland	AEARALNDAGETGERFSACVSKARDHYDRLLAQLIAAEPATAQYARGLADSMGNHLSELERLLDPPSKAELE
Ga0190274_108105493	3300018476	Soil	MLAAMAEARALNDAGERGRQFRRCLEIARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0190274_116496682	3300018476	Soil	LAQFARHTGRMPRHHINPEELAKICGAMLQAMAEARTLNETGDTGERFRACLSQARDSYDRLLAHLISAEPSTAQYARGLADSMGNHLAELEAIMSRATSDMH
Ga0190274_127087111	3300018476	Soil	EAMAEARALNESGEKGRQFRRCLEIARDNYDRLLAELIAAEPGTAQYARGLADSMGNHLTELERLVEPSSSRREM
Ga0190271_106026572	3300018481	Soil	MPRHHINPEELAKICGAMLNAMAEARTLNEMGETGERFRACLTQARDSYDRLLAHLISAEPSTAQYARGLADSMGNHLAELEGVLARASSDTG
Ga0190271_119910872	3300018481	Soil	MPKHHINPEELAKICGQMLQAMAEARTLNETGDTGERFRSCLSQARDSYDRLLAHLIAAEPSTAQYARGLADSMGNHLAELEDVMARATSDMH
Ga0190271_128121781	3300018481	Soil	MPRHHINPEELAKICGSMLQAMAEARTLNEAGDIGSERFRACLTQARDSYDRLLAHLIAAEPSTAQYARGLADSMGNHLAELEAVLARPTSDMH
Ga0173481_107818542	3300019356	Soil	PSDLARLSGAMLEAMAEARALNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM
(restricted) Ga0224723_11201103	3300021517	Freshwater Sediment	LQAMAEARARSDSGDTGAHFHRCLRVARDSYDRLLSELIAAEPSTAQYARGLADSMGNHLSELERIGHRGNDAAA
Ga0207656_100436882	3300025321	Corn Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0207682_100797804	3300025893	Miscanthus Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0207682_102584112	3300025893	Miscanthus Rhizosphere	MLEAMAEARALNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM
Ga0207642_109314252	3300025899	Miscanthus Rhizosphere	MARTPLNPEELARISGAMLQAMAEARALNEAGDTGARFCECVSQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAESRLH
Ga0207688_101734381	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	RLSGAMLEAMAEARALNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM
Ga0207688_104659301	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0207659_105149033	3300025926	Miscanthus Rhizosphere	INPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLDVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0207706_102197705	3300025933	Corn Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQRE
Ga0207669_106217401	3300025937	Miscanthus Rhizosphere	LSGAMLEAMAEARALNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM
Ga0207712_101461363	3300025961	Switchgrass Rhizosphere	MLQAMAEARTLNEAGDHGKRFCACVNIARDNYDRLLAQLISAEPATAQYARGLADSMGNHLSELERLLEAQSDPND
Ga0207640_118327041	3300025981	Corn Rhizosphere	MLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSDLERLADPASSQREM
Ga0207658_102698182	3300025986	Switchgrass Rhizosphere	MLQAMAEARALDEAGDHGKRFCACVNLARDNYDRLLAQLISAEPTTAQYARGLADSMGNHLGELERLLESPSDSVE
Ga0207658_103835011	3300025986	Switchgrass Rhizosphere	NEAGDHGKRFCACVNIARDNYDRLLAQLISAEPATAQYARGLADSMGNHLSELERLLEAQSDPND
Ga0207658_121150191	3300025986	Switchgrass Rhizosphere	NPDTMARHSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0207677_107034671	3300026023	Miscanthus Rhizosphere	ARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0207639_114025922	3300026041	Corn Rhizosphere	MARQSINPSDLARLSGAMLAAMAEARALNEAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0207641_101968465	3300026088	Switchgrass Rhizosphere	MARNPLNPEELARISGAMLQAMAEARALNEAGDTGPRFCEFVSRARESYDCLLAQLISAEPTTAQYARGLADSMGNHLSELERLLDPAESRLH
Ga0207698_111340872	3300026142	Corn Rhizosphere	MLEAMAEARALNEAGEKGRRFRRCIEVARDNYDRLLAQLIAAEPSTAQYARGLADSMGNHLSELERLADPASSQREM
Ga0268265_100980466	3300028380	Switchgrass Rhizosphere	RVMARHPINPDDLARVSGAMLQAMAEARTLNEAGDHGKRFCACVNIARDNYDRLLAQLISAEPATAQYARGLADSMGNHLSELERLLEAQSDPND
Ga0268264_104161293	3300028381	Switchgrass Rhizosphere	MARTPLNPEELARISGAMLQAMAEARALNEAGDTGARFCECVCQARESYDLLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPAESRLH
Ga0247828_102264821	3300028587	Soil	LNPSDLARLSGAMLEAMAEARALNESGEKGRQFRRCLEVARDSYDRLLAALIAAEPGTAQYARGLADSMGNHLNELERLVEPSSSRREM
Ga0102752_13897831	3300030783	Soil	MARQPLDPAELARISGAMLEAMAEARALNEVGDTGARFCACVCQARESYDRMLEQLIAAEPTTAQYARGLADSMGNHLSELERLLEPPESSFH
Ga0308192_10928871	3300031082	Soil	MARHHINPEELAKICGAMLQAMAEARTLKETGDVGDQFRACLTQARDSYDRLLAHLISAEPSTAQYARGLADSMGNHLAELEAVLARSISDAH
Ga0308204_101258612	3300031092	Soil	MARHSINPSDLARLSGAMLAAMAEARALNDAGERGRQFRRCLELARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQRET
Ga0307408_1011081001	3300031548	Rhizosphere	ARLSGAMLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0307408_1014029612	3300031548	Rhizosphere	MARQSINPSDLARLSGAMLAAMAEARALNDAGERGRQFRRCLEIARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSTSSQREM
Ga0307405_109507492	3300031731	Rhizosphere	MARHSINPSDLARLSGAMLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPTTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0308175_1004813403	3300031938	Soil	MLEAMAEARALNESGEKGRQFRRCLEVARDNYDRLLAELITAEPSTAQYARGLADSMGNHLTELERLVESTSSRREM
Ga0308174_110396922	3300031939	Soil	ARVSGAMLQAMAEARALDDAGDHGKRFCACVNVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLLDSPPANFE
Ga0308176_109406561	3300031996	Soil	MLAAMAEARALNDAGERGRQFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0308176_117415712	3300031996	Soil	RVSGAMLQAMAEARALDDAGDHGKRFSACVNVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLLDSPPASFD
Ga0308173_101134605	3300032074	Soil	MLEAMAEARALNEAGEKGRRFRRCLEVARDNYDRLLAQLISAEPSTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0307415_1018393833	3300032126	Rhizosphere	ERGRQFRRCLEVARDNYDRLLAQLISAEPTTAQYARGLADSMGNHLSELERLADSASSQREM
Ga0335085_121327241	3300032770	Soil	NTARQSRSKKFMARQPLNPAELARLSGAMLQAMAEARALNDAGETGERFSACVSKARDHYDRLLAQLIAAEPATAQYARGLADSMGNHLSELERLLDPPSEAELE
Ga0335082_100451107	3300032782	Soil	MLQAMAEARALNDAGETGERFSACVSKARDHYDRLLAQLIAAEPATAQYARGLADSMGNHLSELERLLDPPSEAELE
Ga0335070_113576491	3300032829	Soil	MARQPLDPAELARLSGAMLQAMAEARALNDAGENGERFSACVTKARDHYDRLLAQLIAAEPATAQYARGLADSMGNHLSELERLLDPPSEAELG
Ga0335069_103055081	3300032893	Soil	MTFMARQPLDPDELARLSGAMLQAMAEARALNDAGENGERFSACVTRARDHYDRLLAQLIAAEPATAQYARGLADSMGNHLSELERLLDPPSEAELE
Ga0335069_107759802	3300032893	Soil	MARQPLNPAELARLSGAMLQAMAEARALNDAGETGQRFSACVSKARDQYDRLLAQLIAAEPATAQYARGLADSMGNHLNELERLLDPPSEAPTYARRSNE
Ga0335083_1000053149	3300032954	Soil	MARQPLNPAELARLSGAMLQAMAEARALNDAGETGERFSACVSKARDHYDHLLAQLIAAEPATAQYARGLADSMGNHLSELERLLDPPSEAELE
Ga0335076_116434912	3300032955	Soil	SGAMLQAMAEARALNDAGETGERFSACVSKARDHYDHLLAQLIAAEPATAQYARGLADSMGNHLSELERLLDPPSEAELE
Ga0364942_0118880_534_818	3300034165	Sediment	MARHPINPDELARISGAMLQAMAEARALNEAGDTGQRFCACVSQARDNYDRLLAQLISAEPTTAQYARGLADSMGNHLSELERLLEPPSETERD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters