Metagenome / Metatranscriptome Family F066598

Basic Information
Family ID	F066598
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	63 residues
Representative Sequence	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIERMERLRKQLEEDRKKMDHDNRKEE
Number of Associated Samples	97
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	19.05 %
% of genes from short scaffolds (< 2000 bps)	28.57 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (60.317 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (23.016 % of family members)
Environment Ontology (ENVO)	Unclassified (57.937 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.603 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1JGI25908J49247_100004175 2JGI25908J49247_100797911 3JGI25910J50241_100448312 4JGI25909J50240_10405472 5JGI25912J50252_100674702 6JGI25930J51415_10056106 7Ga0007787_105310263 8Ga0068877_102104472 9Ga0068876_105901301 10Ga0049081_100541975 11Ga0049081_103150291 12Ga0049080_100021626 13Ga0049080_100136293 14Ga0078894_101258705 15Ga0079957_100072128 16Ga0070749_100740545 17Ga0070749_107827951 18Ga0075464_101939323 19Ga0099851_13532061 20Ga0102874_12280692 21Ga0102877_11491852 22Ga0105747_12635822 23Ga0114340_10068219 24Ga0114340_10394855 25Ga0114351_101446912 26Ga0114351_11020375 27Ga0114351_12377061 28Ga0114355_11113232 29Ga0114841_10752393 30Ga0114337_11433504 31Ga0114363_10937862 32Ga0114364_10148381 33Ga0114364_10169745 34Ga0114364_11188603 35Ga0114876_10727212 36Ga0114876_12383622 37Ga0114880_10616684 38Ga0114880_10887713 39Ga0114880_11352282 40Ga0114880_11479792 41Ga0114880_12175552 42Ga0114880_12352622 43Ga0102860_11684353 44Ga0114968_103291212 45Ga0114966_106382622 46Ga0114970_102324932 47Ga0114974_105535692 48Ga0129333_114140982 49Ga0151620_10012073 50Ga0151620_11375412 51Ga0119955_11941922 52Ga0177922_112726953 53Ga0119954_10232073 54Ga0181338_10648442 55Ga0181364_10276724 56Ga0181352_10057252 57Ga0181352_10478151 58Ga0181358_10602001 59Ga0181357_12649372 60Ga0181348_10323605 61Ga0181348_12756692 62Ga0181355_12715702 63Ga0181359_10097706 64Ga0181359_10139441 65Ga0181359_11061541 66Ga0181359_11941411 67Ga0181359_12546461 68Ga0211734_110196682 69Ga0211733_106265462 70Ga0211729_107907973 71Ga0211729_112638593 72Ga0222712_100008738 73Ga0181353_11325013 74Ga0181354_11530342 75Ga0214917_1000105312 76Ga0214921_100160365 77Ga0214919_101783061 78Ga0255151_10281422 79Ga0256338_11362122 80Ga0208424_10424662 81Ga0255156_10841332 82Ga0255188_10153832 83Ga0255074_10389101 84Ga0255066_10362222 85Ga0255066_10384783 86Ga0255070_10542071 87Ga0255100_10718301 88Ga0255083_10409953 89Ga0255131_10198292 90Ga0255135_10095294 91Ga0255138_10551371 92Ga0209247_10113721 93Ga0255086_10039172 94Ga0255097_10274444 95Ga0255077_10445052 96Ga0255068_1256132 97Ga0208966_10607012 98Ga0255118_10426311 99Ga0208974_10092691 100Ga0208974_10104877 101Ga0208975_11388341 102Ga0208975_12005132 103Ga0208975_12130541 104Ga0209442_10125211 105Ga0209596_12420263 106Ga0209296_10580186 107Ga0209358_104257821 108Ga0209668_108682251 109Ga0209253_101377991 110Ga0209048_103238913 111Ga0315291_104808214 112Ga0315907_106796691 113Ga0315899_101041271 114Ga0315900_102191664 115Ga0315909_101021616 116Ga0315909_104897783 117Ga0315285_100990542 118Ga0315904_101355801 119Ga0315901_102342814 120Ga0315274_115535083 121Ga0315906_104702973 122Ga0315275_120645662 123Ga0334995_0118026_93_287 124Ga0334995_0180270_739_933 125Ga0335010_0594452_1_165 126Ga0335058_0000266_13010_13180
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1JGI25908J49247_100004175 2JGI25908J49247_100797911 3JGI25909J50240_10405472 4JGI25912J50252_100674702 5Ga0070749_107827951 6Ga0102877_11491852 7Ga0114351_101446912 8Ga0181359_12546461 9Ga0214921_100160365 10Ga0209253_101377991 11Ga0335058_0000266_13010_13180
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1Ga0334995_0118026_93_287 2JGI25910J50241_100448312 3Ga0049080_100021626 4Ga0049080_100136293 5Ga0070749_107827951 6Ga0102874_12280692 7Ga0114880_11479792 8Ga0114880_12352622 9Ga0119955_11941922 10Ga0181338_10648442 11Ga0181359_10097706 12Ga0211734_110196682 13Ga0214917_1000105312 14Ga0214921_100160365 15Ga0214919_101783061 16Ga0255151_10281422 17Ga0209596_12420263 18Ga0209048_103238913 19Ga0335058_0000266_13010_13180
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.39% β-sheet: 0.00% Coil/Unstructured: 32.61%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00182	Glyco_hydro_19	7.94
PF13884	Peptidase_S74	7.14
PF03837	RecT	1.59
PF09588	YqaJ	1.59
PF13392	HNH_3	1.59
PF00535	Glycos_transf_2	0.79
PF00254	FKBP_C	0.79
PF10926	DUF2800	0.79
PF03245	Phage_lysis	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	7.94
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	7.94
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	1.59

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	39.68 %
Unclassified	root	N/A	60.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.38 %
Unclassified	root	N/A	60.32 %
Viruses	superkingdom	All Organisms → Viruses	37.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.38 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	34.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Unclassified	root	N/A	60.32 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	34.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Unclassified	root	N/A	60.32 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Unclassified	root	N/A	60.32 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	34.13 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	34.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Unclassified	root	N/A	60.32 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	34.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Unclassified	root	N/A	60.32 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Unclassified	root	N/A	60.32 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	34.13 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10000417	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12867	Open in IMG/M
3300003393\|JGI25909J50240_1040547	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	991	Open in IMG/M
3300003499\|JGI25930J51415_1005610	Not Available	2661	Open in IMG/M
3300005582\|Ga0049080_10013629	All Organisms → cellular organisms → Bacteria → Proteobacteria	2828	Open in IMG/M
3300005805\|Ga0079957_1000721	All Organisms → cellular organisms → Bacteria	30140	Open in IMG/M
3300007546\|Ga0102874_1228069	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	567	Open in IMG/M
3300007548\|Ga0102877_1149185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	661	Open in IMG/M
3300007974\|Ga0105747_1263582	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	578	Open in IMG/M
3300008107\|Ga0114340_1006821	All Organisms → cellular organisms → Bacteria → Proteobacteria	5931	Open in IMG/M
3300008117\|Ga0114351_1014469	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9137	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	91.27%
Marine	Environmental → Aquatic → Marine	8.73%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	5.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.38%
Lake	Environmental → Aquatic → Freshwater → Lake	35.71%
Lentic	Environmental → Aquatic → Freshwater → Lentic	33.33%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.59%
River	Environmental → Aquatic → Freshwater → River	14.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.35%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.17%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.54%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	30.95%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	14.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.35%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.97%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.38%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.79%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.79%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	14.29%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.35%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.56%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	23.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.35%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.76%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.38%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.94%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.79%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	9.52%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.17%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M

Showing 1 to 10 of 97 entries

Previous1 2 3 4 5…10Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_100004175	3300003277	Freshwater Lake	MGFLIALICMVLVFCLMLPIITVIYFDTLAVQKESKAQIERMERLRKQLEEDRKKMDQANRKED*
JGI25908J49247_100797911	3300003277	Freshwater Lake	LVTPSDGPKDKMGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEERKQLEQRGESK*
JGI25910J50241_100448312	3300003388	Freshwater Lake	MGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEERKQLEQRGEPK*
JGI25909J50240_10405472	3300003393	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEYERQQLDRLKNESK*
JGI25912J50252_100674702	3300003412	Freshwater Lake	MGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEE
JGI25930J51415_10056106	3300003499	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0007787_105310263	3300004240	Freshwater Lake	GPKDKMGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKESKAQIERMERLRKQLEEERKQLEQRGESK*
Ga0068877_102104472	3300005525	Freshwater Lake	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKEE*
Ga0068876_105901301	3300005527	Freshwater Lake	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMGHDNRKEE*
Ga0049081_100541975	3300005581	Freshwater Lentic	LIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQDNRKED*
Ga0049081_103150291	3300005581	Freshwater Lentic	LVTPSDGPKDKMGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEERKQLEQRGEPK*
Ga0049080_100021626	3300005582	Freshwater Lentic	MGFLIALIAMVLVFCLMLPVISIIYFDTLAVQKESKAQIERMERLRKQLEEERKQLEQRGEPK*
Ga0049080_100136293	3300005582	Freshwater Lentic	MGFLVALVCMVIVFALMLPLIGSIYYDTLATQKESKAQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0078894_101258705	3300005662	Freshwater Lake	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIERMERLRKQLEEDRKKMGHDNRKEE*
Ga0079957_100072128	3300005805	Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLATQKESKAQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0070749_100740545	3300006802	Aqueous	MGFLIALIAMVIVFCLMLPIVGIMYFDTLATQKESKAQIERMERLRKQLEEERKKMDQVNRKED*
Ga0070749_107827951	3300006802	Aqueous	LVTAGDGSKDKMGFLIALVAMVLVFLLMMPVIGIMYFDTLSTQKESKAQIERMERLRKQLEDERKKMDQVNRKEE*
Ga0075464_101939323	3300006805	Aqueous	MGFLIALIAMVLVFCLMLPIVGIMYFDTLSTQRESKAQIERMERLRKQLEEERKKMDQANRKEN*
Ga0099851_13532061	3300007538	Aqueous	MVLVFCLMLPIITVIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMGHDNRKEE*
Ga0102874_12280692	3300007546	Estuarine	MGFLVALVAMVLVFVLLLPLIGSIYYDTLAAQKESKMQIERMERLCQQLEYERQQLDRQ
Ga0102877_11491852	3300007548	Estuarine	MGFLVALCCMVLVFVLLLPLLGSIYYDTLAVQRESKQQIERMERLRQQLEYERKQL
Ga0105747_12635822	3300007974	Estuary Water	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEHDRKELDRMKNESK*
Ga0114340_10068219	3300008107	Freshwater, Plankton	MVIVFALMLPLIGSIYYDTLATQKESKAQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0114340_10394855	3300008107	Freshwater, Plankton	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMD
Ga0114351_101446912	3300008117	Freshwater, Plankton	MGFLVALIAMVIVFALMLPKESKMQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0114351_11020375	3300008117	Freshwater, Plankton	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKED*
Ga0114351_12377061	3300008117	Freshwater, Plankton	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNE
Ga0114355_11113232	3300008120	Freshwater, Plankton	MGFLVALIALVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0114841_10752393	3300008259	Freshwater, Plankton	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQDNRKED*
Ga0114337_11433504	3300008262	Freshwater, Plankton	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKM
Ga0114363_10937862	3300008266	Freshwater, Plankton	MGFLIALVAMVLVFLLMMPVIGIMYFDTLSTQKESKAQIERMERLRKQLEDERKKMDQVNRKEE*
Ga0114364_10148381	3300008267	Freshwater, Plankton	IAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0114364_10169745	3300008267	Freshwater, Plankton	MVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0114364_11188603	3300008267	Freshwater, Plankton	LVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQDNRKED*
Ga0114876_10727212	3300008448	Freshwater Lake	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQIEEDRKKMDHDNRKEE*
Ga0114876_12383622	3300008448	Freshwater Lake	KMGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEERKQLEQRGESK*
Ga0114880_10616684	3300008450	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEHDRKELDRMKNDSK*
Ga0114880_10887713	3300008450	Freshwater Lake	MGFLVALVCMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0114880_11352282	3300008450	Freshwater Lake	MGFLVALVCMVIVFALMLPLIGSIYYDTLATQKESKMQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0114880_11479792	3300008450	Freshwater Lake	MGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEDRKKMDQANRKED*
Ga0114880_12175552	3300008450	Freshwater Lake	KDKMGFLIALIAMVLVFCLMLPVIGIMYFDTLSTQKESKAQIERMERLRKQLEEERKQLEQRGESK*
Ga0114880_12352622	3300008450	Freshwater Lake	MGFLIALVCMVLVFLLMLPLIGSIYYDTLAAQKENKVQIERMERLRQQLEYDRKQLERQKNDN
Ga0102860_11684353	3300009056	Estuarine	YGQKSKMGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEYERQQLDRLKNESK*
Ga0114968_103291212	3300009155	Freshwater Lake	MGFLIALICMVLVFCLMLPIITVIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQANRKED*
Ga0114966_106382622	3300009161	Freshwater Lake	MGFLIALIAMVLVFCLMLPIIGVMYFDTLSTQRESKAQIERMERLRKQLEEERKKMDQANRKED*
Ga0114970_102324932	3300009163	Freshwater Lake	MGFLIALIAMVLVFCLMLPIISVIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQANRKED*
Ga0114974_105535692	3300009183	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEYERKELDRLKNESK*
Ga0129333_114140982	3300010354	Freshwater To Marine Saline Gradient	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNES
Ga0151620_10012073	3300011268	Freshwater	MGFLVALIAMVIVFALMLPLIGSIYYDTLATQKESKMQIERMERLRQQLEQDRKDLDRMKNESK*
Ga0151620_11375412	3300011268	Freshwater	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDR*
Ga0119955_11941922	3300012006	Freshwater	MGFLVALIAMVIVFALMLPLIGSIYYDTLATQKESKAQIERMERLRQQLEQDRKALEQLKNDSK*
Ga0177922_112726953	3300013372	Freshwater	GFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKEE*
Ga0119954_10232073	3300014819	Freshwater	MGFLIALVAMVIVFCLMLPIVGIMYFDTLATQKESKAQIERMERLRKQLEEDRKRMDQANRKDE*
Ga0181338_10648442	3300015050	Freshwater Lake	MGFLVALVAMVLVFVLLLPLIGSIYYDTLAVQRESKLQIERMERLRQQLEYERKQLERLKNDNS
Ga0181364_10276724	3300017701	Freshwater Lake	CMVLVFCLMLPIITVIYFDTLAVQKESKAQIERMERLRKQLEEDRKKMDQANRKED
Ga0181352_10057252	3300017747	Freshwater Lake	MGFLIALIAMVLVFCLMLPVIGIMYFDTLSTQKESKAQIERMERLRKQLEEERKQLEQRGESK
Ga0181352_10478151	3300017747	Freshwater Lake	RVLVTPSDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIERMERLRKQLEEDRKKMGHDNRKEE
Ga0181358_10602001	3300017774	Freshwater Lake	SQMGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0181357_12649372	3300017777	Freshwater Lake	MGFLVALVAMVLVFVLLLPLLGSIYYDTLAAQKESKMQIERMERLRQQLEYERQQLDR
Ga0181348_10323605	3300017784	Freshwater Lake	LVTPSDGPKDKMGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEERKQLEQRGEPK
Ga0181348_12756692	3300017784	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKLQIERMERLRQQLEYERQQLDRMKNESK
Ga0181355_12715702	3300017785	Freshwater Lake	MGFLIALIAMVLVFCLMLPVISIIYFDTLAVQKESKAQIERMERLRKQLEEE
Ga0181359_10097706	3300019784	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEYERQQLDRLKNESK
Ga0181359_10139441	3300019784	Freshwater Lake	MGFLIALICMVLVFCLMLPIITVIYFDTLAVQKESKAQIERMERLRKQLEEDRKKMDQANRKED
Ga0181359_11061541	3300019784	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0181359_11941411	3300019784	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMK
Ga0181359_12546461	3300019784	Freshwater Lake	LVTPSDGPKDKMGFLIALIAMVLVFCLMLPVISIIYFDTLAVQKESKAQIERMES
Ga0211734_110196682	3300020159	Freshwater	MGFLIALIAMVLVFCLMLPIIGVMYFDTLSTQKESKAQIERMEKLRKQLEDERKKMDQVNRKED
Ga0211733_106265462	3300020160	Freshwater	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMGHDN
Ga0211729_107907973	3300020172	Freshwater	MGFLIALFAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEERKQLEQRGEPK
Ga0211729_112638593	3300020172	Freshwater	MGFLVALVCMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0222712_100008738	3300021963	Estuarine Water	MGFLVALIAMVIVFALMLPLIGSIYYDTLATQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0181353_11325013	3300022179	Freshwater Lake	QMGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEYERQQLDRLKNESK
Ga0181354_11530342	3300022190	Freshwater Lake	MGFLIALVCMVLVFVLMLPLIGSIYYDTLAAQKENKVQIERMERLRQQLEYDRKQLERS
Ga0214917_1000105312	3300022752	Freshwater	MGFLIALVAMVIVFCLMLPIVGIMYFDTLATQKESKAQIERMERLRKQLEEDRKRMDQANRKDE
Ga0214921_100160365	3300023174	Freshwater	MGFLIALVCMVLVFLLMLPIVGIMYFDTLSTQKESKAQIERMERLRKQLEEERKKLEQRGESK
Ga0214919_101783061	3300023184	Freshwater	MGFLVALCCMVLVFVLLLPVIGSIYYDTLAVQRESKMQIERMERLRQQLEFERKQFE
Ga0255151_10281422	3300024496	Freshwater	MGFLIALIAMVIVFCLMLPLVGIMYFDTLATQKESKAQIERMERLRKQLEEERKKMDQVNRKED
Ga0256338_11362122	3300024536	Freshwater	AGSKDKMGFLIALIAMVIVFCLMLPIVGIMYFDTLATQKESKAQIERMERLRKQLEEERKKMDQVNRKED
Ga0208424_10424662	3300025445	Aqueous	MGFLIALIAMVIVFCLMLPIVGIMYFDTLATQKESKAQIERMERLRKQLEEERKKMD
Ga0255156_10841332	3300026478	Freshwater	PSVGQKDKMGFLIALIAMVIVFCLMLPLVGIMYFDTLATQKESKAQIERMERLRKQLEEERKKMDQVNRKED
Ga0255188_10153832	3300027079	Freshwater	LVTPGDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKEE
Ga0255074_10389101	3300027121	Freshwater	VIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDKMKNESK
Ga0255066_10362222	3300027131	Freshwater	ERVLVTPSDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKEE
Ga0255066_10384783	3300027131	Freshwater	ALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDKMKNESK
Ga0255070_10542071	3300027133	Freshwater	ALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0255100_10718301	3300027152	Freshwater	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLD
Ga0255083_10409953	3300027153	Freshwater	PSDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKEE
Ga0255131_10198292	3300027285	Freshwater	MVIVFALMLPLIGSIYYDTLATQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0255135_10095294	3300027287	Freshwater	MGFLVALVCMVIVFALMLPLIGSIYYDTLATQKESKMQIERMERLRQQLEQDRKD
Ga0255138_10551371	3300027333	Freshwater	VCMVIVFALMLPLIGSIYYDTLATQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0209247_10113721	3300027468	Freshwater Lake	MGFLIALICMVLVFCLMLPIITVIYFDTLAVQKESKAQIERMERLRKQLEEERKQLEQRN
Ga0255086_10039172	3300027486	Freshwater	MGFLVALIAMVIVFALMLPLIGSIYYDTLATQKESKAQIERMERLRQQLEQDRKDLDKMKNESK
Ga0255097_10274444	3300027491	Freshwater	LVTPSDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDH
Ga0255077_10445052	3300027529	Freshwater	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDKMKNESK
Ga0255068_1256132	3300027579	Freshwater	LVTPSDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKM
Ga0208966_10607012	3300027586	Freshwater Lentic	LVTPSDGPKDKMGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEERKQLEQRGESK
Ga0255118_10426311	3300027593	Freshwater	KSKMGFLVALVCMVIVFALMLPLIGSIYYDTLATQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0208974_10092691	3300027608	Freshwater Lentic	MGFLIALIAMVLVFCLMLPVISIIYFDTLAVQKESKAQIDRMERLRKQLEEERKQL
Ga0208974_10104877	3300027608	Freshwater Lentic	LVALVCMVIVFALMLPLIGSIYYDTLATQKESKAQIERMERLRQQLEQDRKDLDRMKNES
Ga0208975_11388341	3300027659	Freshwater Lentic	SDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKEE
Ga0208975_12005132	3300027659	Freshwater Lentic	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDR
Ga0208975_12130541	3300027659	Freshwater Lentic	LIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKE
Ga0209442_10125211	3300027732	Freshwater Lake	MGFLIALIAMVLVFCLMLPLIGVIYFDTLSTQKQSLAQIERMERLRKQLEEERKQLEQRGESK
Ga0209596_12420263	3300027754	Freshwater Lake	MGFLIALICMVLVFCLMLPIITVIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQANRKED
Ga0209296_10580186	3300027759	Freshwater Lake	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEYERKELDRLKNESK
Ga0209358_104257821	3300027804	Freshwater Lake	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIERMERLRKQLEEDRKKMGHDNRKEE
Ga0209668_108682251	3300027899	Freshwater Lake Sediment	SQRVLVTPSDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEERKKMDQANRKEE
Ga0209253_101377991	3300027900	Freshwater Lake Sediment	SQRVLVTPSDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMGHDNRKEE
Ga0209048_103238913	3300027902	Freshwater Lake Sediment	MGFLVALCCMVLVFLLLLPLIGSMYYDTLAAQKESKAQIERMERLRKQLEEDRKQMEKHK
Ga0315291_104808214	3300031707	Sediment	VLVFCLMLPIITVIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQANRKED
Ga0315907_106796691	3300031758	Freshwater	MGFLIALVAMVLVFLLMMPVIGIMYFDTLSTQKESKAQIERMERLRKQLEDERKKMDQVNRKEE
Ga0315899_101041271	3300031784	Freshwater	IAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMGHDNRKEE
Ga0315900_102191664	3300031787	Freshwater	SVFHFTRYGQKSQMGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0315909_101021616	3300031857	Freshwater	MVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0315909_104897783	3300031857	Freshwater	GFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKDLDRMKNESK
Ga0315285_100990542	3300031885	Sediment	MGFLIALIAMVLVFCLMLPIISVIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQANRKED
Ga0315904_101355801	3300031951	Freshwater	LVTPGDGPKDKMGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKK
Ga0315901_102342814	3300031963	Freshwater	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLCKQLEEDRKKMDHDNRKEE
Ga0315274_115535083	3300031999	Sediment	MVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEYERKELDRLKNESK
Ga0315906_104702973	3300032050	Freshwater	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDHDNRKE
Ga0315275_120645662	3300032401	Sediment	KDQMGFLIALICMVLVFCLMLPIITVIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMDQANRKED
Ga0334995_0118026_93_287	3300034062	Freshwater	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIERMERLRKQLEEDRKKMDHDNRKEE
Ga0334995_0180270_739_933	3300034062	Freshwater	MGFLIALIAMVLVFCLMLPIISIIYFDTLAVQKESKAQIDRMERLRKQLEEDRKKMGQDNRKED
Ga0335010_0594452_1_165	3300034092	Freshwater	MGFLVALIAMVIVFALMLPLIGSIYYDTLAVQKESKMQIERMERLRQQLEQDRKD
Ga0335058_0000266_13010_13180	3300034121	Freshwater	MVLVFVLMLPLIGSIYYDTLAAQKESKAQVERMERLRKQLEEDRKLMNEERQRHEK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066598

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences