Metagenome Family F066543

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066543
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	116 residues
Representative Sequence	VPWPVFLRGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN
Number of Associated Samples	94
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.52 %
% of genes near scaffold ends (potentially truncated)	71.43 %
% of genes from short scaffolds (< 2000 bps)	79.37 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.635 % of family members)
Environment Ontology (ENVO)	Unclassified (26.190 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.19% β-sheet: 11.11% Coil/Unstructured: 54.70%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF10604	Polyketide_cyc2	24.60
PF04020	Phage_holin_4_2	19.84
PF00440	TetR_N	6.35
PF13305	TetR_C_33	3.97
PF13245	AAA_19	2.38
PF08031	BBE	2.38
PF00239	Resolvase	1.59
PF10648	Gmad2	1.59
PF14528	LAGLIDADG_3	1.59
PF00083	Sugar_tr	0.79
PF14306	PUA_2	0.79
PF00211	Guanylate_cyc	0.79
PF13538	UvrD_C_2	0.79
PF10823	DUF2568	0.79
PF01022	HTH_5	0.79
PF10012	DUF2255	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	19.84
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.38
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.59
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.59
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.06 %
Unclassified	root	N/A	33.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.27 %
Unclassified	root	N/A	33.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.17 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	6.35 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.59 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	6.35 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.59 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.79 %
Carbonactinosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Marmoricola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola	6.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.59 %
Carbonactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae → Carbonactinospora	0.79 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Marmoricola pocheonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	6.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.59 %
Carbonactinospora thermoautotrophica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae → Carbonactinospora → Carbonactinospora thermoautotrophica	0.79 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_119317180	Not Available	1004	Open in IMG/M
3300003373\|JGI25407J50210_10032887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1341	Open in IMG/M
3300003373\|JGI25407J50210_10071172	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300004479\|Ga0062595_100139823	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300005562\|Ga0058697_10133686	Not Available	1066	Open in IMG/M
3300005981\|Ga0081538_10000556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41334	Open in IMG/M
3300005981\|Ga0081538_10004493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12846	Open in IMG/M
3300005981\|Ga0081538_10017588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5417	Open in IMG/M
3300005981\|Ga0081538_10017728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5388	Open in IMG/M
3300005985\|Ga0081539_10017084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5122	Open in IMG/M
3300006845\|Ga0075421_100193551	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300006847\|Ga0075431_101849060	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300006853\|Ga0075420_100300346	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300006871\|Ga0075434_101078526	Not Available	817	Open in IMG/M
3300006969\|Ga0075419_10207429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae → Carbonactinospora → Carbonactinospora thermoautotrophica	1299	Open in IMG/M
3300007004\|Ga0079218_12668854	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300009094\|Ga0111539_10036781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5916	Open in IMG/M
3300009156\|Ga0111538_10039583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6079	Open in IMG/M
3300009156\|Ga0111538_12104008	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300009553\|Ga0105249_10514840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1243	Open in IMG/M
3300009789\|Ga0126307_10044619	All Organisms → cellular organisms → Bacteria	3452	Open in IMG/M
3300009789\|Ga0126307_10722339	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300009805\|Ga0105079_1041653	Not Available	523	Open in IMG/M
3300009814\|Ga0105082_1104497	Not Available	537	Open in IMG/M
3300009816\|Ga0105076_1088619	Not Available	591	Open in IMG/M
3300009817\|Ga0105062_1025308	Not Available	1017	Open in IMG/M
3300009818\|Ga0105072_1041226	Not Available	869	Open in IMG/M
3300009821\|Ga0105064_1033947	Not Available	960	Open in IMG/M
3300009840\|Ga0126313_10026721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3915	Open in IMG/M
3300009840\|Ga0126313_10922934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	713	Open in IMG/M
3300010037\|Ga0126304_10028178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3277	Open in IMG/M
3300010038\|Ga0126315_10093738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1712	Open in IMG/M
3300010040\|Ga0126308_11255651	Not Available	525	Open in IMG/M
3300010040\|Ga0126308_11322565	Not Available	512	Open in IMG/M
3300010041\|Ga0126312_10012797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5624	Open in IMG/M
3300010041\|Ga0126312_10252009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	1240	Open in IMG/M
3300010042\|Ga0126314_10659638	Not Available	765	Open in IMG/M
3300010042\|Ga0126314_11176812	Not Available	572	Open in IMG/M
3300010044\|Ga0126310_10683754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300010044\|Ga0126310_10744824	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300010044\|Ga0126310_11224677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	604	Open in IMG/M
3300010044\|Ga0126310_11288546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300010166\|Ga0126306_10017856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4641	Open in IMG/M
3300010166\|Ga0126306_11044019	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012204\|Ga0137374_10284612	Not Available	1365	Open in IMG/M
3300012360\|Ga0137375_11470484	Not Available	502	Open in IMG/M
3300014487\|Ga0182000_10183826	Not Available	787	Open in IMG/M
3300014497\|Ga0182008_10293573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300015265\|Ga0182005_1138981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300017965\|Ga0190266_10427962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300018000\|Ga0184604_10019384	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300018027\|Ga0184605_10519068	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300018052\|Ga0184638_1022233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2251	Open in IMG/M
3300018072\|Ga0184635_10017161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2614	Open in IMG/M
3300018073\|Ga0184624_10391698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	618	Open in IMG/M
3300018076\|Ga0184609_10012089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3247	Open in IMG/M
3300018076\|Ga0184609_10033348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2128	Open in IMG/M
3300018078\|Ga0184612_10163286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1164	Open in IMG/M
3300018082\|Ga0184639_10451988	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300018465\|Ga0190269_10195917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300018466\|Ga0190268_10511133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	819	Open in IMG/M
3300018469\|Ga0190270_10412588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1255	Open in IMG/M
3300018481\|Ga0190271_12003115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	688	Open in IMG/M
3300019767\|Ga0190267_10891782	Not Available	607	Open in IMG/M
3300019869\|Ga0193705_1027915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1217	Open in IMG/M
3300021073\|Ga0210378_10009037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4283	Open in IMG/M
3300021078\|Ga0210381_10356347	Not Available	535	Open in IMG/M
3300022756\|Ga0222622_10290599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300026652\|Ga0208713_100039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1895	Open in IMG/M
3300027056\|Ga0209879_1077051	Not Available	525	Open in IMG/M
3300027332\|Ga0209861_1042909	Not Available	667	Open in IMG/M
3300027718\|Ga0209795_10047838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1310	Open in IMG/M
3300027718\|Ga0209795_10224931	Not Available	525	Open in IMG/M
3300027750\|Ga0209461_10160083	Not Available	553	Open in IMG/M
3300027809\|Ga0209574_10326242	Not Available	530	Open in IMG/M
3300027909\|Ga0209382_12270584	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300027949\|Ga0209860_1001694	All Organisms → cellular organisms → Bacteria	3202	Open in IMG/M
3300027961\|Ga0209853_1151968	Not Available	559	Open in IMG/M
3300028578\|Ga0272482_10145581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	700	Open in IMG/M
3300028707\|Ga0307291_1015828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1679	Open in IMG/M
3300028709\|Ga0307279_10027091	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300028710\|Ga0307322_10095054	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300028714\|Ga0307309_10159520	Not Available	575	Open in IMG/M
3300028716\|Ga0307311_10171020	Not Available	630	Open in IMG/M
3300028717\|Ga0307298_10077077	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300028719\|Ga0307301_10083876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300028720\|Ga0307317_10036189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1554	Open in IMG/M
3300028744\|Ga0307318_10030767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1747	Open in IMG/M
3300028755\|Ga0307316_10007558	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300028755\|Ga0307316_10148967	Not Available	833	Open in IMG/M
3300028796\|Ga0307287_10019968	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300028796\|Ga0307287_10151417	Not Available	881	Open in IMG/M
3300028814\|Ga0307302_10227882	Not Available	911	Open in IMG/M
3300028876\|Ga0307286_10063773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1263	Open in IMG/M
3300028878\|Ga0307278_10000472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20213	Open in IMG/M
3300028878\|Ga0307278_10188964	Not Available	919	Open in IMG/M
3300028880\|Ga0307300_10067060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300028881\|Ga0307277_10129750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
3300030499\|Ga0268259_10097930	Not Available	654	Open in IMG/M
3300030510\|Ga0268243_1078270	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300031548\|Ga0307408_100038249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3384	Open in IMG/M
3300031548\|Ga0307408_100150775	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300031548\|Ga0307408_101665937	Not Available	607	Open in IMG/M
3300031731\|Ga0307405_10012644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4478	Open in IMG/M
3300031731\|Ga0307405_10080979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2121	Open in IMG/M
3300031731\|Ga0307405_12127158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	504	Open in IMG/M
3300031824\|Ga0307413_10108446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1853	Open in IMG/M
3300031852\|Ga0307410_10671359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis	871	Open in IMG/M
3300031903\|Ga0307407_11198175	Not Available	593	Open in IMG/M
3300031903\|Ga0307407_11621677	Not Available	514	Open in IMG/M
3300031911\|Ga0307412_10224270	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300031911\|Ga0307412_10359212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300031995\|Ga0307409_100305370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1482	Open in IMG/M
3300032002\|Ga0307416_100253592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1714	Open in IMG/M
3300032002\|Ga0307416_100621399	Not Available	1162	Open in IMG/M
3300032002\|Ga0307416_102514539	Not Available	613	Open in IMG/M
3300032004\|Ga0307414_10043789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3052	Open in IMG/M
3300032004\|Ga0307414_10919448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803	Open in IMG/M
3300032004\|Ga0307414_11328026	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300032004\|Ga0307414_12183856	Not Available	517	Open in IMG/M
3300032126\|Ga0307415_100364450	Not Available	1221	Open in IMG/M
3300032126\|Ga0307415_101098612	Not Available	744	Open in IMG/M
3300032126\|Ga0307415_101295557	Not Available	690	Open in IMG/M
3300032159\|Ga0268251_10143761	Not Available	893	Open in IMG/M
3300034131\|Ga0334911_030697	Not Available	755	Open in IMG/M
3300034174\|Ga0334932_037231	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.11%
Host-Associated	Host-Associated	38.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.59%
Plants	Host-Associated → Plants	38.89%
Aquatic	Environmental → Aquatic	9.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.78%
Sediment	Environmental → Aquatic → Sediment	7.94%
Roots	Host-Associated → Plants → Roots	4.76%
Phylloplane	Host-Associated → Plants → Phylloplane	3.97%
Freshwater	Environmental → Aquatic → Freshwater	1.59%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.94%
Sand	Environmental → Terrestrial → Soil → Sand	7.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.76%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.59%
Loam	Environmental → Terrestrial → Soil → Loam	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.94%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	7.94%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.59%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	18.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.29%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.14%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	4.76%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.59%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.59%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009805	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026652	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1117 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1193171802	3300000956	Soil	VPWPVFLRGGPGIEVLVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADVHPPPPHPGSSLRLGPRASTVIGSALVAAGEEVSLASTPVN*
JGI25407J50210_100328871	3300003373	Tabebuia Heterophylla Rhizosphere	WVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN*
JGI25407J50210_100711721	3300003373	Tabebuia Heterophylla Rhizosphere	LAGGRLWILRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALEAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTATPVN*
Ga0062595_1001398231	3300004479	Soil	VFLHGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0058697_101336862	3300005562	Agave	VPWSAFLHGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDEWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0081538_1000055612	3300005981	Tabebuia Heterophylla Rhizosphere	VPWSAFLRGPGLEVVVGARLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDEWLPRALAAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTSTPVN*
Ga0081538_100044937	3300005981	Tabebuia Heterophylla Rhizosphere	VPWPAFLHGGDGVEVLVAGRLWVLRLLFGLPAGVEVGVPGLTATVADGLGLDGGEWLDRAVAAAFLDPLVALGVATLDPPAPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0081538_100175884	3300005981	Tabebuia Heterophylla Rhizosphere	VLRLLLGLPAGVEIGLQGLVETVANGLELDLDEWLHRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0081538_100177283	3300005981	Tabebuia Heterophylla Rhizosphere	VPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDRLPRAVAAAFLDPLVALGVADIRPPPPHPGASLRLGPRATTVIGSALVAAGEEVSLASTPAN*
Ga0081539_100170845	3300005985	Tabebuia Heterophylla Rhizosphere	VYAAWCHRVPWPVFLRDAPGIEALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPSN*
Ga0075421_1001935511	3300006845	Populus Rhizosphere	AWCHRVPWSAFLQGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGEADLRPPPPHPGASLRLGPRASIVIGSALVAAGEEVSLASTPAN*
Ga0075431_1018490601	3300006847	Populus Rhizosphere	RSGLVYAAWCHRVPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0075420_1003003463	3300006853	Populus Rhizosphere	VPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVEVGLQGLVETVASGLELDLDDWLPRAIAAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTATPAN*
Ga0075434_1010785261	3300006871	Populus Rhizosphere	VPWSAFLQGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSL
Ga0075419_102074294	3300006969	Populus Rhizosphere	MPWPVFLHGGTGVEALVGGRLWLLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVTAAFLDPRVALGVADIRAPPPHPGASFLLGPPAAT
Ga0079218_126688541	3300007004	Agricultural Soil	LRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0111539_100367816	3300009094	Populus Rhizosphere	VPWSAFLQGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGEADLRPPPPHPGASLRLGPRASIVIGSALVAAGEEVSLASTPAN*
Ga0111538_100395831	3300009156	Populus Rhizosphere	SRSGLTYALWCHRVPWSAFLQGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGEADLRPPPPHPGASLRLGPRASIVIGSALVAAGEEVSLASTPAN*
Ga0111538_121040081	3300009156	Populus Rhizosphere	SRSGLTYALWCHRVPWSAFLQGPGLEVVVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVTAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLASTPAN*
Ga0105249_105148403	3300009553	Switchgrass Rhizosphere	VYAAWCHRVPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0126307_100446191	3300009789	Serpentine Soil	DPGLRAGLVYAAWCHRVPWPVFLRDAPGIDALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPSN*
Ga0126307_107223391	3300009789	Serpentine Soil	VPWPVFLRGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0105079_10416531	3300009805	Groundwater Sand	RLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0105082_11044971	3300009814	Groundwater Sand	WCHRVPWPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0105076_10886192	3300009816	Groundwater Sand	WPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLGGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0105062_10253081	3300009817	Groundwater Sand	QIDESLRAGLTFAAWCHRVPWPAFLHGDAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLSATVAGGLGLETGQWLDRAVAAAFLDPLVALGVAALDPPPPNPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0105072_10412261	3300009818	Groundwater Sand	LHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLGGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0105064_10339471	3300009821	Groundwater Sand	VPWPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0126313_100267214	3300009840	Serpentine Soil	VLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0126313_109229342	3300009840	Serpentine Soil	VFLRGGPGVEVLAGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALEAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTATPVN*
Ga0126304_100281785	3300010037	Serpentine Soil	AFLRGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0126315_100937384	3300010038	Serpentine Soil	PWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0126308_112556512	3300010040	Serpentine Soil	WCHRVPWPAFLRGGPGVEALFGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0126308_113225652	3300010040	Serpentine Soil	FLRGGPGIEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDEWLPRALAAAFLDPLVALGVADIHPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0126312_100127972	3300010041	Serpentine Soil	VLRLLLGLPAGVEVGLQGLVETVANGLELDLDEWLPRALAAAFLDPLVALGVADIHPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0126312_102520091	3300010041	Serpentine Soil	VLAGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALEAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTSTAAN*
Ga0126314_106596382	3300010042	Serpentine Soil	VPWPVFLRGGPGVEALAGGRLWILRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALEAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTATPV
Ga0126314_111768122	3300010042	Serpentine Soil	GIEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDVWLPRALAAAFLDPLVALGVADIHPPPPLPGSGLRLGPRASTVIGSALVAAGEEVSLASTPVN*
Ga0126310_106837542	3300010044	Serpentine Soil	VYAAWCHRVPWPVFLRDAPGIEALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPVN*
Ga0126310_107448241	3300010044	Serpentine Soil	WCHRVPWPAFLRGPGLEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPLPGSGLRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0126310_112246772	3300010044	Serpentine Soil	VFLRDAPGIEALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPVN*
Ga0126310_112885461	3300010044	Serpentine Soil	LWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN*
Ga0126306_100178566	3300010166	Serpentine Soil	WCHRVPWPVFLRGGPGIEVLAGGRLWILRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALEAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTATPVN*
Ga0126306_110440191	3300010166	Serpentine Soil	TSLRHAWAQIDRGLRSGLVYAAWCHRVPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN*
Ga0137374_102846122	3300012204	Vadose Zone Soil	RAGLVYAAWCHRVPWPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0137375_114704841	3300012360	Vadose Zone Soil	RAGLVYAAWCHRVPWPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASVRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0182000_101838261	3300014487	Soil	VPWPVFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVGGLAATVAGGLGLEGGDWLDRAVTAAFLDPLVALGVATLDPPPPDPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN*
Ga0182008_102935732	3300014497	Rhizosphere	VPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN*
Ga0182005_11389811	3300015265	Rhizosphere	MLGHRVPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN*
Ga0190266_104279622	3300017965	Soil	RHAWAQIDPGLRAGLVYAAWCHRVPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPTN
Ga0184604_100193843	3300018000	Groundwater Sediment	VPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRAATVIGSALVAAGEEVSLASTPAN
Ga0184605_105190682	3300018027	Groundwater Sediment	LRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRAATVIGSALVAAGEEVSLASTPAN
Ga0184638_10222331	3300018052	Groundwater Sediment	LRAGLVYAAWCHRVPWPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN
Ga0184635_100171614	3300018072	Groundwater Sediment	VPWPVFLHGGPGIEVLVGGRLWVLRLLLGLPAGVEVGLQGLVETVASGLELDLDDWLPRAIAAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTGTPAN
Ga0184624_103916982	3300018073	Groundwater Sediment	WCHRVPWPVFLHGGPGIEVLVGGRLWVLRLLLGLPAGVEVGLQGLVETVASGLELDLDDWLPRAIAAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTATPA
Ga0184609_100120892	3300018076	Groundwater Sediment	VFLRGGPDVEALAAGRLWVLRLLLGLPAGVDVGLPGLVETVANGLELDLSDWLPRAVAAAFLDPLVALGVADLRPPPPHPAASLRLGARASTVIGSALVAAGEEVSLASVPAN
Ga0184609_100333485	3300018076	Groundwater Sediment	VGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0184612_101632863	3300018078	Groundwater Sediment	PWPVFLQGGPGVEVLVGGRRWVLRLLLGLPAGVEVGLQGLVETVASGLELDLDDWLPRAIAAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVPAGEEVSLTATPAN
Ga0184639_104519881	3300018082	Groundwater Sediment	AWTQIDEGLRAGLVYAAWCHRVPWPAFLHGGAGVEALVGGRLWVLRLLRGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0190269_101959173	3300018465	Soil	LVYAAWCHRVPWPAFLRGPGLEALVGGRLWVLGLLLGLPAGVEVGLQGLVETVANALELGLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0190268_105111332	3300018466	Soil	AWCHRVPWPVFLQGGPGVEVLVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALVAAGEEVSLTATPAN
Ga0190270_104125883	3300018469	Soil	VPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAIAAAFLDPLVALGVADIRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTATPAN
Ga0190271_120031152	3300018481	Soil	LVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0190267_108917821	3300019767	Soil	VPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0193705_10279151	3300019869	Soil	VEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0210378_100090371	3300021073	Groundwater Sediment	LVYAAWCHRVPWPVFLRGGPDVEALAAGRLWVLRLLLGLPAGVDVGLPGLVETVANGLELDLSDWLPRAVAAAFLDPLVALGVADLRPPPPHPAASLRLGARASTVIGSALVAAGEEVSLASVPAN
Ga0210381_103563471	3300021078	Groundwater Sediment	VPWSAFLQGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSA
Ga0222622_102905991	3300022756	Groundwater Sediment	LTCAVWCHRVPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0208713_1000392	3300026652	Soil	VPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN
Ga0209879_10770511	3300027056	Groundwater Sand	LVGGRLWVLRLLFGLPAGVEVGVPGLSATVAGGLGLETGQWLDRAVAAAFLDPLVALGVAALDPPPPNPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN
Ga0209861_10429091	3300027332	Groundwater Sand	LEATSLRHAWTQIDESLRAGLVYAAWCHRVPWPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDGGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN
Ga0209795_100478383	3300027718	Agave	TLRAGLTFAAWCHRVPWPVFLHGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN
Ga0209795_102249311	3300027718	Agave	HSAPQFAGWCHRVPWPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVGGLAATVAGGLGLEGGDWLDRAVTAAFLDPLVALGVATLDPPPPNPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN
Ga0209461_101600831	3300027750	Agave	VYAAWCHRVPWPVFLRDAPGIDALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0209574_103262421	3300027809	Agave	RLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADVHPPPPHPGSSLRLGPRASTVIGSALVAAGEEVSLAATPVN
Ga0209382_122705841	3300027909	Populus Rhizosphere	FLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0209860_10016941	3300027949	Groundwater Sand	AWCHRVPWPAFLHGGAGVEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDAGDWLDRAVAAAFLDPLVALGVATLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN
Ga0209853_11519682	3300027961	Groundwater Sand	GGRLWVLRLLFGLPAGVEVGVPGLSATVAGGLGLETGQWLDRAVAAAFLDPLVALGVAALDPPPPNPAASLRLLPRASTVIGSALVAAGEEVPLAATPAN
Ga0272482_101455812	3300028578	Soil	LRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307291_10158281	3300028707	Soil	SAFLQGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307279_100270912	3300028709	Soil	GRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGSGLRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0307322_100950542	3300028710	Soil	YAAWCHRVPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307309_101595201	3300028714	Soil	RLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGSGLRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0307311_101710201	3300028716	Soil	RLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307298_100770773	3300028717	Soil	EVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307301_100838761	3300028719	Soil	LWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307317_100361893	3300028720	Soil	ATSLRHAWAQIDRGLRSGLVYAAWCHRVPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307318_100307671	3300028744	Soil	GPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307316_100075584	3300028755	Soil	VPWSAFLQGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307316_101489672	3300028755	Soil	LVYAAWCHRVPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307287_100199684	3300028796	Soil	MPPGAIVSPGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307287_101514171	3300028796	Soil	QIDRGLRSGLVYAAWCHRVPWPAFLRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307302_102278822	3300028814	Soil	GRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307286_100637733	3300028876	Soil	LRGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307278_1000047221	3300028878	Soil	VPWPVFLRGGPGIEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADLHPAPPHPGSSLRLGPRASTVIGSALVAAGEEVSLAATPVN
Ga0307278_101889641	3300028878	Soil	RGGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307300_100670601	3300028880	Soil	EALAGGRLWVLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307277_101297502	3300028881	Soil	VFLRDAPGIETLVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADVRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPSN
Ga0268259_100979301	3300030499	Agave	LPRLKRPAWAPPGVAVTPVSGLQPTLSSRVRVAVRFTFRAPLAAWCHRVPWPVFLRDAPGIDALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0268243_10782702	3300030510	Soil	HRVPWSAFLHGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN
Ga0307408_1000382496	3300031548	Rhizosphere	WAQIDRGLRSGLVYAAWCHRVPWPAFLRGPGVEALVGGRLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN
Ga0307408_1001507752	3300031548	Rhizosphere	VLRLLLSLPAGVEIGLQGLVETVANGLQLDLDEWLHRAVAAAFLDPLVALGVADIRPPPPHPGSAVRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307408_1016659371	3300031548	Rhizosphere	WCHRVPWPVFLRDAPGIEALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPV
Ga0307405_100126446	3300031731	Rhizosphere	LVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN
Ga0307405_100809791	3300031731	Rhizosphere	VLRLLLGLPAGVEVGLQGLVETVANALELDLDDWLPRAVAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307405_121271581	3300031731	Rhizosphere	AGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPHALEAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALIAAGEEVSLTSTAAN
Ga0307413_101084465	3300031824	Rhizosphere	VPWPVFLRDAPGIETLVGARIWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0307410_106713591	3300031852	Rhizosphere	GGRLWILRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPHALEAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALIAAGEEVSLTSTAAN
Ga0307407_111981751	3300031903	Rhizosphere	LRHAWAQIDPGLRAGLVYAAWCHRVPWPVFLRDAPGIEALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGAALRLGPRASTVIGSALVAAGEEVSLASTPIN
Ga0307407_116216772	3300031903	Rhizosphere	LRSGLVYAAWCHRVPWPVFLRGGPGIEVLAGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPHALEAAFLDPLVALGVADIRPPPPHPGASLRLGPRAATVIGSALIAAGEEVSLTSTAAN
Ga0307412_102242703	3300031911	Rhizosphere	RAGLVYAAWCHRVPWPVFLRDAPGIETLVGARIWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0307412_103592122	3300031911	Rhizosphere	VLRLLLSLPAGVEIGLQGLVETVANGLELDLDEWLHRAVAAAFLDPLVALGVADIRPPPPHPGSAVRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0307409_1003053701	3300031995	Rhizosphere	PWPVFLRGGPGVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPLPHPGASLRLGPRASTVIGSALVAAGEEISLASTPAN
Ga0307416_1002535921	3300032002	Rhizosphere	VPWPVFLRGGPWVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPLPHPGASLRLGPRASTVIGSALVAAGEEISLASTPAN
Ga0307416_1006213991	3300032002	Rhizosphere	DRLEATSLRHAWAQIDPGLVYAAWCHRVPWPVFLRDAPGIDALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPSN
Ga0307416_1025145391	3300032002	Rhizosphere	LWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGSGLRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0307414_100437891	3300032004	Rhizosphere	PGGRRWGCWCHRVPWPVFLRDAPGIETLVGARIWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPVN
Ga0307414_109194481	3300032004	Rhizosphere	VPWSAFLHGPGVEVLVGGRLGVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDSLPRGLAAAFLDPLVALGVADLRPPPPHPGSSLRLGPRASTVIGSALVAAGEEISLASTPSN
Ga0307414_113280261	3300032004	Rhizosphere	TFAAWCHRVPWPVFLHGGPGVEILVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTLAN
Ga0307414_121838561	3300032004	Rhizosphere	AGLVYAAWCHRVPWPVFLRDAPGIEALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGAALRLGPRASTVIGSALVAAGEEVSLASTPIN
Ga0307415_1003644502	3300032126	Rhizosphere	GLVYAAWCHRVPWPVFLRDAPGIDALVGARLWVLRLLLGLPAGVEVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPPPHPGSALRLGPRASTVIGSALVAAGEEVSLASTPSN
Ga0307415_1010986121	3300032126	Rhizosphere	VSFTLRAHIFPVWCHRVPWPVFLRGGPWVEVLVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIRPPLPHPGASLRLGPRASTVIGSALVAAGEEISLASTPAN
Ga0307415_1012955572	3300032126	Rhizosphere	VEALVGGRLWVLRLLFGLPAGVEVGVPGLTATVAGGLGLDGGDWLDRAVAAAFLDPLVALGVAVLDPPPPHPAASLRLLPRASTVIGSALVAAGEEVPLATTPAN
Ga0268251_101437611	3300032159	Agave	VPWSAFLHGPGLEVVVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDEWLPRALAAAFLDPLVALGVADLRPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLASTPAN
Ga0334911_030697_79_429	3300034131	Sub-Biocrust Soil	VPWPVFLHGPGVEALVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN
Ga0334932_037231_47_385	3300034174	Sub-Biocrust Soil	MFLHGPGVEALVGGRLWVLRLLLGLPAGVDVGLQGLVETVANGLELDLDDWLPRALAAAFLDPLVALGVADIHPPPPHPGASLRLGPRASTVIGSALVAAGEEVSLTSTPAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066543

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences