Metagenome / Metatranscriptome Family F066378

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066378
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	53 residues
Representative Sequence	WVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Number of Associated Samples	79
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.61 %
% of genes near scaffold ends (potentially truncated)	92.86 %
% of genes from short scaffolds (< 2000 bps)	87.30 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (31.746 % of family members)
Environment Ontology (ENVO)	Unclassified (96.825 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (69.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.85% β-sheet: 0.00% Coil/Unstructured: 64.15%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF16401	DUF5009	14.29
PF08546	ApbA_C	5.56
PF07676	PD40	3.17
PF01814	Hemerythrin	1.59
PF05685	Uma2	1.59
PF01408	GFO_IDH_MocA	0.79
PF07730	HisKA_3	0.79
PF00135	COesterase	0.79
PF06250	YhcG_C	0.79
PF13640	2OG-FeII_Oxy_3	0.79
PF14684	Tricorn_C1	0.79
PF02769	AIRS_C	0.79
PF00069	Pkinase	0.79
PF03681	Obsolete Pfam Family	0.79
PF06452	CBM9_1	0.79
PF15919	HicB_lk_antitox	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	5.56
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.17
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.59
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.79
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.79
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.79
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.79
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.79
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.11 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.79 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	0.79 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.79 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10063296	Not Available	1891	Open in IMG/M
3300000567\|JGI12270J11330_10164986	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300001356\|JGI12269J14319_10147055	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300004152\|Ga0062386_100680184	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300009518\|Ga0116128_1038707	Not Available	1546	Open in IMG/M
3300009518\|Ga0116128_1092797	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300009518\|Ga0116128_1200940	Not Available	560	Open in IMG/M
3300009549\|Ga0116137_1064266	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300009549\|Ga0116137_1137165	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300009549\|Ga0116137_1196995	Not Available	540	Open in IMG/M
3300009552\|Ga0116138_1182754	Not Available	579	Open in IMG/M
3300009614\|Ga0116104_1080953	Not Available	663	Open in IMG/M
3300009615\|Ga0116103_1109333	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300009617\|Ga0116123_1051809	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300009618\|Ga0116127_1047974	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300009621\|Ga0116116_1096374	Not Available	814	Open in IMG/M
3300009629\|Ga0116119_1045636	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300009629\|Ga0116119_1085424	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300009630\|Ga0116114_1042937	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300009636\|Ga0116112_1017998	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300009636\|Ga0116112_1209199	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300009637\|Ga0116118_1088386	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300009637\|Ga0116118_1108895	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300009639\|Ga0116122_1224234	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009760\|Ga0116131_1164376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300009839\|Ga0116223_10642197	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009839\|Ga0116223_10778898	Not Available	547	Open in IMG/M
3300014151\|Ga0181539_1116799	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300014151\|Ga0181539_1216994	Not Available	728	Open in IMG/M
3300014152\|Ga0181533_1013297	All Organisms → cellular organisms → Bacteria	5961	Open in IMG/M
3300014152\|Ga0181533_1168285	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300014152\|Ga0181533_1196736	Not Available	782	Open in IMG/M
3300014152\|Ga0181533_1257346	Not Available	648	Open in IMG/M
3300014153\|Ga0181527_1198432	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300014155\|Ga0181524_10246698	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300014155\|Ga0181524_10463803	Not Available	543	Open in IMG/M
3300014156\|Ga0181518_10271490	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300014158\|Ga0181521_10031724	All Organisms → cellular organisms → Bacteria	4010	Open in IMG/M
3300014158\|Ga0181521_10214335	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300014159\|Ga0181530_10333960	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300014165\|Ga0181523_10600291	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300014638\|Ga0181536_10076272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2015	Open in IMG/M
3300017925\|Ga0187856_1179648	Not Available	779	Open in IMG/M
3300017929\|Ga0187849_1157045	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300017929\|Ga0187849_1163329	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300017929\|Ga0187849_1168974	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300017929\|Ga0187849_1183349	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300017929\|Ga0187849_1313489	Not Available	584	Open in IMG/M
3300017931\|Ga0187877_1262610	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300017935\|Ga0187848_10413415	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300017938\|Ga0187854_10067389	Not Available	1739	Open in IMG/M
3300017938\|Ga0187854_10194955	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300017938\|Ga0187854_10250938	Not Available	767	Open in IMG/M
3300017938\|Ga0187854_10409637	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300017940\|Ga0187853_10142635	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300017940\|Ga0187853_10305095	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300017941\|Ga0187850_10095073	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300017941\|Ga0187850_10408889	Not Available	592	Open in IMG/M
3300017975\|Ga0187782_10366612	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300017996\|Ga0187891_1039741	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300017996\|Ga0187891_1088198	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300017998\|Ga0187870_1137891	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300018002\|Ga0187868_1114071	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300018002\|Ga0187868_1202182	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300018004\|Ga0187865_1111184	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300018005\|Ga0187878_1120888	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300018005\|Ga0187878_1164942	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300018007\|Ga0187805_10127915	Not Available	1154	Open in IMG/M
3300018008\|Ga0187888_1187471	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300018008\|Ga0187888_1198218	Not Available	799	Open in IMG/M
3300018008\|Ga0187888_1367075	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300018009\|Ga0187884_10441599	Not Available	523	Open in IMG/M
3300018013\|Ga0187873_1250747	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300018014\|Ga0187860_1137502	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300018016\|Ga0187880_1366940	Not Available	608	Open in IMG/M
3300018018\|Ga0187886_1379611	Not Available	518	Open in IMG/M
3300018021\|Ga0187882_1273827	Not Available	650	Open in IMG/M
3300018023\|Ga0187889_10209350	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300018024\|Ga0187881_10140500	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300018024\|Ga0187881_10386053	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300018026\|Ga0187857_10531718	Not Available	526	Open in IMG/M
3300018030\|Ga0187869_10569327	Not Available	537	Open in IMG/M
3300018057\|Ga0187858_10096303	Not Available	2026	Open in IMG/M
3300018062\|Ga0187784_10490046	Not Available	991	Open in IMG/M
3300018085\|Ga0187772_10745650	Not Available	704	Open in IMG/M
3300018086\|Ga0187769_10714955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300018088\|Ga0187771_10820074	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300018088\|Ga0187771_10996099	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300018088\|Ga0187771_11174735	Not Available	651	Open in IMG/M
3300018090\|Ga0187770_10222471	Not Available	1458	Open in IMG/M
3300018090\|Ga0187770_11723950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300019082\|Ga0187852_1215115	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300019275\|Ga0187798_1789726	Not Available	566	Open in IMG/M
3300019284\|Ga0187797_1046887	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300025419\|Ga0208036_1002426	All Organisms → cellular organisms → Bacteria	6518	Open in IMG/M
3300025419\|Ga0208036_1020422	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300025441\|Ga0208456_1028766	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300025442\|Ga0208034_1024399	Not Available	1573	Open in IMG/M
3300025444\|Ga0208189_1095809	Not Available	519	Open in IMG/M
3300025448\|Ga0208037_1030095	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300025459\|Ga0208689_1004133	All Organisms → cellular organisms → Bacteria	6134	Open in IMG/M
3300025459\|Ga0208689_1084753	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300025469\|Ga0208687_1031391	Not Available	1412	Open in IMG/M
3300025500\|Ga0208686_1010852	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300027854\|Ga0209517_10019940	All Organisms → cellular organisms → Bacteria	6290	Open in IMG/M
3300031463\|Ga0272448_1087610	All Organisms → cellular organisms → Bacteria → Acidobacteria	2052	Open in IMG/M
3300032401\|Ga0315275_10487313	All Organisms → cellular organisms → Bacteria → Acidobacteria	1381	Open in IMG/M
3300033402\|Ga0326728_10026637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10204	Open in IMG/M
3300033402\|Ga0326728_10237289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1761	Open in IMG/M
3300033402\|Ga0326728_10504874	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300033402\|Ga0326728_10747211	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300033405\|Ga0326727_10007138	All Organisms → cellular organisms → Bacteria	29859	Open in IMG/M
3300033405\|Ga0326727_10504080	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300033405\|Ga0326727_10612493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	902	Open in IMG/M
3300033755\|Ga0371489_0327768	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300033755\|Ga0371489_0431231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300033977\|Ga0314861_0192259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300033977\|Ga0314861_0345010	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300033977\|Ga0314861_0351080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300033977\|Ga0314861_0366760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300033982\|Ga0371487_0427034	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300033983\|Ga0371488_0008706	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	8751	Open in IMG/M
3300033983\|Ga0371488_0322521	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300034091\|Ga0326724_0409997	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	72.22%
Terrestrial	Environmental → Terrestrial	27.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	71.43%
Soil	Environmental → Terrestrial → Soil	17.46%
Peat	Environmental → Terrestrial → Peat	10.32%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.79%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	70.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.76%
Lake	Environmental → Aquatic → Freshwater → Lake	0.79%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.79%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	44.44%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	25.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.79%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	31.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	25.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	10.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.14%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	5.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025441	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100 (SPAdes)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300031463	Hot spring sediment microbial communities from Yellowstone National Park, WY, United States - YNP-CB-019-1	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100632964	3300000567	Peatlands Soil	HLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPLSEGTVTGQA*
JGI12270J11330_101649861	3300000567	Peatlands Soil	HLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSSLSEGTVSGQA*
JGI12269J14319_101470551	3300001356	Peatlands Soil	HLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPLTEGTVTGQA*
Ga0062386_1006801841	3300004152	Bog Forest Soil	LFPLVERGLDPETQQKVRHAMEELSQETSSPVAEGSLSAQA*
Ga0116128_10387072	3300009518	Peatland	VRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSRVAEGTLSAQA*
Ga0116128_10927971	3300009518	Peatland	VRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA*
Ga0116128_12009401	3300009518	Peatland	LLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAERTLSAQA*
Ga0116137_10642662	3300009549	Peatland	PLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA*
Ga0116137_11371652	3300009549	Peatland	RLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSARA*
Ga0116137_11969951	3300009549	Peatland	WVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA*
Ga0116138_11827541	3300009552	Peatland	LVERGLDPETQQKVRRAMEELSQETSSRVAEGTLSAQA*
Ga0116104_10809531	3300009614	Peatland	QEVMKRGRNYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSRVAEGTLSAQA*
Ga0116103_11093331	3300009615	Peatland	NRQEVKKRGRNYVQWVRAHRLRENGRQFPQVERGHDPETQQKVRRAMEELSQETSSPVVEGTLSAQA*
Ga0116123_10518091	3300009617	Peatland	MRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAERTLSAQA*
Ga0116127_10479741	3300009618	Peatland	YVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA*
Ga0116116_10963741	3300009621	Peatland	NGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSEQA*
Ga0116119_10456361	3300009629	Peatland	ENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAERTLSAQA*
Ga0116119_10854241	3300009629	Peatland	GRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA*
Ga0116114_10429373	3300009630	Peatland	FPLVERGLDPETQQKVRRAMEELSHETSSPLAEGTVTGQA*
Ga0116112_10179981	3300009636	Peatland	NYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVVEGTLSAQA*
Ga0116112_12091992	3300009636	Peatland	VERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA*
Ga0116118_10883861	3300009637	Peatland	HLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA*
Ga0116118_11088951	3300009637	Peatland	QEVMKRGRNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVLRAMEELSHETSSPLSEGTVSGRA*
Ga0116118_11616702	3300009637	Peatland	VEQWVKNGKNRQEVMKRGRNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSHETSSPLTEGTVTGRA*
Ga0116122_12242341	3300009639	Peatland	ENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA*
Ga0116131_11643762	3300009760	Peatland	VERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA*
Ga0116223_106421972	3300009839	Peatlands Soil	RLFPLVERGLDPETQQKVRRAMEELSHETSSPLAEGTVTGQA*
Ga0116223_107788981	3300009839	Peatlands Soil	RNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSSLLEGTVSGQA*
Ga0181539_11167991	3300014151	Bog	AHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA*
Ga0181539_12169942	3300014151	Bog	QCVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA*
Ga0181533_10132975	3300014152	Bog	ENGRLFPLVERGLDAETQQKVRRAMEELSQETSSPVVERTLSAQA*
Ga0181533_11682852	3300014152	Bog	NYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSHVAQGSLSAQA*
Ga0181533_11967362	3300014152	Bog	YVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA*
Ga0181533_12573462	3300014152	Bog	MKRGRNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSSLSEGTASGQA*
Ga0181527_11984321	3300014153	Bog	QEVMKRGRNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA*
Ga0181524_102466981	3300014155	Bog	RAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSSLSEGTASGQA*
Ga0181524_104638031	3300014155	Bog	NGRLFPLVERGLDPETQQKVCHSMEELSQETSSPVVEGTLPAHA*
Ga0181518_102714901	3300014156	Bog	WVRAHLLKENGRLFPLVDRGLDPETQQKVRRAMEELSQETSSPLSEGTVSGQA*
Ga0181521_100317241	3300014158	Bog	GRNYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSARA*
Ga0181521_102143352	3300014158	Bog	EVMKRGRNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVLRAMEELSHETSSPLSEGTVSGRA*
Ga0181530_103339601	3300014159	Bog	EVMKRGRNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPLSEGTVSGQA*
Ga0181523_106002912	3300014165	Bog	VQWVRVHLVKENGRLFPLVERGLDPETQQKVRRAMEELSHETSSPLSEGTVSGQA*
Ga0181536_100762721	3300014638	Bog	KNRQEVTKRGRSYVQWVRAHLLKENGRLFPLVERGLDPEPQQKVRRAMEGLSQETSSPVAEGTLSAQA*
Ga0187856_11796482	3300017925	Peatland	NYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAIEELSQETSSPVAEGTLSAQA
Ga0187849_11570452	3300017929	Peatland	RLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSARA
Ga0187849_11633291	3300017929	Peatland	VRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSRVAEGTLSAQA
Ga0187849_11689741	3300017929	Peatland	RLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA
Ga0187849_11833492	3300017929	Peatland	LRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVGEGTLSAQA
Ga0187849_13134892	3300017929	Peatland	VRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVVEGTLSAQA
Ga0187877_12626101	3300017931	Peatland	EQWAKNGKNRQEVMKRGRNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187848_104134151	3300017935	Peatland	HLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187854_100673892	3300017938	Peatland	MKRGRNYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVGEGTLSAQA
Ga0187854_101949551	3300017938	Peatland	VRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA
Ga0187854_102509381	3300017938	Peatland	GRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAERTLSAQA
Ga0187854_104096371	3300017938	Peatland	ENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187853_101426351	3300017940	Peatland	LLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAERTLSAQA
Ga0187853_103050951	3300017940	Peatland	PLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSARA
Ga0187850_100950731	3300017941	Peatland	KSGKNRQEVMKRGRNYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVVEGTLSAQA
Ga0187850_104088891	3300017941	Peatland	ENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAERTLSAQA
Ga0187782_103666121	3300017975	Tropical Peatland	AHLLKENGRLFPLVERGLDPETQQKVRRAMEELSRETSSPLAEGTVSGQA
Ga0187891_10397411	3300017996	Peatland	YVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187891_10881982	3300017996	Peatland	KNGKNRQEVLKRGRNYVQWVHAHLLKENGRLFPLVERGLDQETQQKVRRAMEELSQETSSPLTEGTVTGQA
Ga0187870_11378911	3300017998	Peatland	MKRGRNYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVVEGTLSAQA
Ga0187868_11140712	3300018002	Peatland	RAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSARA
Ga0187868_12021821	3300018002	Peatland	GKNRQEVMKRGRNYVQWVRAHLLKENGRLFPLVDRGLDPETQQEVRRAMEELSQDTSSHVAEGSLSAQA
Ga0187865_11111842	3300018004	Peatland	KENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187878_11208882	3300018005	Peatland	NYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVGEGTLSAQA
Ga0187878_11649421	3300018005	Peatland	SYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA
Ga0187805_101279153	3300018007	Freshwater Sediment	VHRAVGEERQDRQEVMKRGRNYVQWLRAHLLKENGRLFPLVERGLDPETQRKVRRAMEELSHEISSPVAEGSVSGQA
Ga0187888_11874712	3300018008	Peatland	GENGRLFPLVERGLDTETQQKVRRAMEELSQETSSPVVERTLSAQA
Ga0187888_11982182	3300018008	Peatland	VQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187888_13670752	3300018008	Peatland	LKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187884_104415991	3300018009	Peatland	VERGLDPETQQKVCHSMEELSQETSSPVVEGTLPAHA
Ga0187873_12507472	3300018013	Peatland	WVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVGEGTLSAQA
Ga0187860_11375022	3300018014	Peatland	FPLVDRGLDPETQQEVRRAMEELSQDTSSHVAEGSLSAQA
Ga0187880_13669401	3300018016	Peatland	KNRQEVMKRGRNYVQWVRAHLLKENGRLFPLVDRGLDPETQQEVRRAMEELSQDTSSHVAEGSLSAQA
Ga0187886_13796111	3300018018	Peatland	RAHLLKENGRLFPLVERGLDAETQQKVRRAMEELSQETSSPVAERTLSAQA
Ga0187882_12738271	3300018021	Peatland	SGKNRQEVTKRGCSYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVVEGTLSAQA
Ga0187889_102093502	3300018023	Peatland	ERGLDPETQQKVRRAMEELSQETSSAVAEGTLSARA
Ga0187881_101405001	3300018024	Peatland	PLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA
Ga0187881_103860532	3300018024	Peatland	QWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQEASSPVAKGTLSTQA
Ga0187857_105317181	3300018026	Peatland	GRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187869_105693272	3300018030	Peatland	LVERGLDPETQQKVCRAMEELSQVAPSPVAEGTLSARA
Ga0187858_100963031	3300018057	Peatland	PLVERGLDPETQQKVRRAMEELSHETSSPLAEGTVTGQA
Ga0187784_104900461	3300018062	Tropical Peatland	MKRGRSYVQWVRAHLLKENGRLFPLVERGLDSETQQQVRHAMEELSQETSSHLAEGTLSGQA
Ga0187772_107456501	3300018085	Tropical Peatland	RGRLLRENGRLFPLVERGLDSETQQKVRRAMEELGQESSSHLAEGTVSGQA
Ga0187769_107149551	3300018086	Tropical Peatland	EVMKRGRNYVQWVRAHMLKENGRLFPLVERGLDPETQRKVRRAMEELSQEISSPVSEGSVSGQA
Ga0187771_108200741	3300018088	Tropical Peatland	RNYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSARA
Ga0187771_109960992	3300018088	Tropical Peatland	QEVMKRGRNYVQWVRAHLLKENGRLFPLVERGLDAETQQKVRRAMEELSQEISSPMAEGSVSGQA
Ga0187771_111747352	3300018088	Tropical Peatland	FPLVERGLDAETQQKVRRAMEELSQETSSHLAEGTLSAQA
Ga0187770_102224713	3300018090	Tropical Peatland	HLMKENGRLFPLVERGLDAETQQQVRRAMEELSQEVSTPLSEGTVSGRA
Ga0187770_117239502	3300018090	Tropical Peatland	GRNYVQWVRAHMLKENGRLFPLVERGLDPETQQKVRRAMEELSQEISSPVSEGTVSGQA
Ga0187852_12151152	3300019082	Peatland	LLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0187798_10339942	3300019275	Peatland	EQWVKSGKNRQEVMKRCRNYVQWVRAHMLKENGRLFPLVERGLDPETQQRVRRAMEELSQEISSPVSEGSVSGRA
Ga0187798_17897261	3300019275	Peatland	QEVMKRGRNFVQWVRAHLMNENGRLFPLVDRGLDAETQQKVRRAMEELSQEISSPLAEGTGSGQA
Ga0187797_10468871	3300019284	Peatland	RGLDPETQQKVRRAMEELSQETFAPVGETTLSAQA
Ga0208036_10024261	3300025419	Peatland	WVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSRVAEGTLSAQA
Ga0208036_10204223	3300025419	Peatland	WVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA
Ga0208456_10287661	3300025441	Peatland	VQWMRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAERTLSAQA
Ga0208034_10243992	3300025442	Peatland	RGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA
Ga0208189_10958091	3300025444	Peatland	NGRLFPLVERGLDPETQQKVRRAMEELSHETSSPLAEGTVTGQA
Ga0208037_10300951	3300025448	Peatland	MRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAERTLSAQA
Ga0208689_10041335	3300025459	Peatland	RENGRLFPLVERGLDPETQQKVRRAMEELSQETSSRVAEGTLSAQA
Ga0208689_10847531	3300025459	Peatland	VERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0208687_10313911	3300025469	Peatland	QWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0208686_10108525	3300025500	Peatland	VRAHLLQENGRLFPLVERGLDPETQQKVRRAMEELSHETSSPLAEGTVTGQA
Ga0209517_100199406	3300027854	Peatlands Soil	NYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPLSEGTVTGQA
Ga0272448_10876101	3300031463	Sediment	LLERRLNPKTQREIRRAMEELARGTEARMAGGFPGPAQA
Ga0315275_104873131	3300032401	Sediment	GRLFPLVERRLNPETQRQIRRAMEELSQETEARVAEGSTAPAQA
Ga0326728_100266371	3300033402	Peat Soil	QWLRSHLLKENGRLFPLVERGLDPQTQQEVRRAMEELSQESSSPVAQGTLPAHA
Ga0326728_102372892	3300033402	Peat Soil	WAKSGKNRQEVIKRGRNYVQWVRGHLLKENGRLFPLVARGLDPETQQEVCRAMEELSLGTSSPVAEGTLAAQA
Ga0326728_105048742	3300033402	Peat Soil	WAKSGKNRQEVMKRGRNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSAVAEGTLSAQA
Ga0326728_107472112	3300033402	Peat Soil	NRQEVMKRGRNYVQWVRAHLLRENGRLFPLVERGLDPETQQKVRHAMEELSQETSSRVAEGTLSAQA
Ga0326727_100071381	3300033405	Peat Soil	VQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETASPLSEGTVTGQA
Ga0326727_105040801	3300033405	Peat Soil	WVRAHLLRENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSAQA
Ga0326727_106124932	3300033405	Peat Soil	WVRAHLLRENGRLFPLVEYGLDPETQQQVRRAMEELSQETSSHLAEGTVSAQA
Ga0371489_0327768_608_727	3300033755	Peat Soil	PLVERGLDPETQQKVRRAMEELSQETSSPVAEGTLSARA
Ga0371489_0431231_384_596	3300033755	Peat Soil	SGKNRQEVMKRGRNYVQWVRSHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQVISSPVSEGTVSGQA
Ga0314861_0192259_12_230	3300033977	Peatland	VKSGKNRQEVMKRGRNYVQWVRAQLLKENGRLFPLVERGLDPETQQKVRRAMEELSQEISSPVSEGSVSGQA
Ga0314861_0345010_478_660	3300033977	Peatland	RGRNYVQLVRAHLLRENGRLFPLVERSLDPETQQRVCRAMEELSQETPSPVAEGTLSAQA
Ga0314861_0351080_12_230	3300033977	Peatland	VKSGKNRQEVMKRGRNYVQWVRAQLLKENGRLFPLVERGLDPDTQQQVRRAMEELSQEISSPVSEGSVSGQA
Ga0314861_0366760_3_179	3300033977	Peatland	RNYVQWVRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQEISSPVSEGSVSGQA
Ga0371487_0427034_23_166	3300033982	Peat Soil	MKENGRLFPLVERGLDPETQQQVRRAMEELSQEVSTPLAEGTVSGQA
Ga0371488_0008706_8583_8741	3300033983	Peat Soil	VRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPLSEGTVSGQA
Ga0371488_0322521_565_723	3300033983	Peat Soil	VRAHLLKENGRLFPLVERGLDPETQQKVRRAMEELSQETASPLSEGTVTGQA
Ga0326724_0409997_5_148	3300034091	Peat Soil	LKENGRLFPLVERGLDPETQQKVRRAMEELSQETSSPLSEGTVSGQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066378

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences