Metagenome / Metatranscriptome Family F066164

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066164
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	109 residues
Representative Sequence	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEITTGLTIASVLAIAIFGWSYYRSNRNANAQAQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPI
Number of Associated Samples	106
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.61 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.28 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.850 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.898 % of family members)
Environment Ontology (ENVO)	Unclassified (30.709 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.055 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.40% β-sheet: 0.00% Coil/Unstructured: 30.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00005	ABC_tran	16.54
PF04542	Sigma70_r2	8.66
PF00664	ABC_membrane	6.30
PF09976	TPR_21	2.36
PF13174	TPR_6	2.36
PF02694	UPF0060	1.57
PF14938	SNAP	1.57
PF14534	DUF4440	0.79
PF00082	Peptidase_S8	0.79
PF13424	TPR_12	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	8.66
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	8.66
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	8.66
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	8.66
COG1742	Uncharacterized inner membrane protein YnfA, drug/metabolite transporter superfamily	General function prediction only [R]	1.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	78.74 %
Unclassified	root	N/A	3.15 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.36 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	68.50 %
Unclassified	root	N/A	3.15 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.50 %
Unclassified	root	N/A	3.15 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.36 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.50 %
Unclassified	root	N/A	3.15 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.57 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.50 %
Unclassified	root	N/A	3.15 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.57 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.50 %
Unclassified	root	N/A	3.15 %
Fulvivirgaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae	0.79 %
Prevotellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	0.79 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.50 %
Unclassified	root	N/A	3.15 %
Fulvivirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga	0.79 %
Cytophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Cytophaga	0.79 %
Prevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.50 %
Unclassified	root	N/A	3.15 %
unclassified Prevotella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → unclassified Prevotella	0.79 %
Fulvivirga imtechensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga → Fulvivirga imtechensis	0.79 %
Cytophaga aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Cytophaga → Cytophaga aurantiaca	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.50 %
Unclassified	root	N/A	3.15 %
Prevotella sp. tf2-5	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → unclassified Prevotella → Prevotella sp. tf2-5	0.79 %
Fulvivirga imtechensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga → Fulvivirga imtechensis	0.79 %
Cytophaga aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Cytophaga → Cytophaga aurantiaca	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104758063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300000550\|F24TB_13768104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300000956\|JGI10216J12902_101846923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300002908\|JGI25382J43887_10069641	Not Available	1901	Open in IMG/M
3300004114\|Ga0062593_103421680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300004157\|Ga0062590_102245766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005172\|Ga0066683_10507648	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300005180\|Ga0066685_10934497	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005186\|Ga0066676_10389155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300005295\|Ga0065707_11024887	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005331\|Ga0070670_101495095	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300005332\|Ga0066388_103016388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300005332\|Ga0066388_103582472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300005367\|Ga0070667_102136402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300005435\|Ga0070714_101252197	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005445\|Ga0070708_101281415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300005446\|Ga0066686_10680465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300005447\|Ga0066689_10608893	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005447\|Ga0066689_10690383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005518\|Ga0070699_100395436	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300005553\|Ga0066695_10312563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300005558\|Ga0066698_10754896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300005568\|Ga0066703_10298720	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005569\|Ga0066705_10842680	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga → Fulvivirga imtechensis	545	Open in IMG/M
3300005574\|Ga0066694_10038506	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300005764\|Ga0066903_102939645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300005764\|Ga0066903_107159345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300006031\|Ga0066651_10349416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300006163\|Ga0070715_10946953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300006796\|Ga0066665_10222297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1479	Open in IMG/M
3300006797\|Ga0066659_11008319	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300006806\|Ga0079220_10911178	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → unclassified Prevotella → Prevotella sp. tf2-5	684	Open in IMG/M
3300006845\|Ga0075421_100461797	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300006845\|Ga0075421_100720068	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300006847\|Ga0075431_101279673	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300006853\|Ga0075420_101281602	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Cytophaga → Cytophaga aurantiaca	629	Open in IMG/M
3300006871\|Ga0075434_101879461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300006871\|Ga0075434_102040835	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300006904\|Ga0075424_102490905	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300007076\|Ga0075435_101022147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300009089\|Ga0099828_11365825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300009094\|Ga0111539_11371961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300009094\|Ga0111539_13538726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009143\|Ga0099792_11242414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300009156\|Ga0111538_10531860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1490	Open in IMG/M
3300009162\|Ga0075423_11645715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300009162\|Ga0075423_12163819	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300009609\|Ga0105347_1303134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300009795\|Ga0105059_1048064	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300010043\|Ga0126380_11779590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300010046\|Ga0126384_10873565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300010046\|Ga0126384_11330430	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300010046\|Ga0126384_12206838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010047\|Ga0126382_10886490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300010047\|Ga0126382_11371429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300010109\|Ga0127497_1058959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300010122\|Ga0127488_1030649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010301\|Ga0134070_10263088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300010304\|Ga0134088_10004879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5557	Open in IMG/M
3300010320\|Ga0134109_10428267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300010325\|Ga0134064_10027001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1665	Open in IMG/M
3300010326\|Ga0134065_10018691	All Organisms → cellular organisms → Bacteria	1933	Open in IMG/M
3300010335\|Ga0134063_10289923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300010358\|Ga0126370_11123625	Not Available	726	Open in IMG/M
3300010358\|Ga0126370_11430694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300010358\|Ga0126370_12663898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010359\|Ga0126376_11467706	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300010359\|Ga0126376_13239897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300010360\|Ga0126372_11012816	Not Available	843	Open in IMG/M
3300010362\|Ga0126377_10136342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2289	Open in IMG/M
3300010366\|Ga0126379_10590324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300010366\|Ga0126379_10882084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300010376\|Ga0126381_102129259	Not Available	807	Open in IMG/M
3300010398\|Ga0126383_11164631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300010398\|Ga0126383_12201752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300010398\|Ga0126383_13621533	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300010403\|Ga0134123_12735606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300011430\|Ga0137423_1001994	All Organisms → cellular organisms → Bacteria	6423	Open in IMG/M
3300012039\|Ga0137421_1260067	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300012189\|Ga0137388_10837142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300012201\|Ga0137365_10278494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300012203\|Ga0137399_10717767	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012208\|Ga0137376_10124713	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300012351\|Ga0137386_11249050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300012356\|Ga0137371_11189793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012362\|Ga0137361_11781932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300012362\|Ga0137361_11810068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012373\|Ga0134042_1195671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300012685\|Ga0137397_10220144	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300012944\|Ga0137410_11309010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300012948\|Ga0126375_11321162	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300012948\|Ga0126375_11526145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300012971\|Ga0126369_12891413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012971\|Ga0126369_12995453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300013297\|Ga0157378_12303570	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300014150\|Ga0134081_10337029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300015358\|Ga0134089_10106039	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300015373\|Ga0132257_100952889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300015374\|Ga0132255_102371484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	810	Open in IMG/M
3300016445\|Ga0182038_10305223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1303	Open in IMG/M
3300017656\|Ga0134112_10348001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300017659\|Ga0134083_10079274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1273	Open in IMG/M
3300018468\|Ga0066662_10674287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300018482\|Ga0066669_11197841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300018482\|Ga0066669_11372585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300022724\|Ga0242665_10170781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300025906\|Ga0207699_11085129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300025917\|Ga0207660_10530528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300025918\|Ga0207662_10946861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300025944\|Ga0207661_11231145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300026324\|Ga0209470_1339611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300026334\|Ga0209377_1009642	All Organisms → cellular organisms → Bacteria	5504	Open in IMG/M
3300026528\|Ga0209378_1276074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300026529\|Ga0209806_1073598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1530	Open in IMG/M
3300026538\|Ga0209056_10266004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300026547\|Ga0209156_10409862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300026550\|Ga0209474_10559156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300026550\|Ga0209474_10650197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027909\|Ga0209382_10626400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300031231\|Ga0170824_121148185	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300031573\|Ga0310915_10276357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300031820\|Ga0307473_10944083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300031833\|Ga0310917_10810326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300031945\|Ga0310913_10586506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300032180\|Ga0307471_101219622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300032205\|Ga0307472_101612594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300034149\|Ga0364929_0299645	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.04%
Host-Associated	Host-Associated	14.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.68%
Plants	Host-Associated → Plants	14.96%
Aquatic	Environmental → Aquatic	2.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.39%
Sediment	Environmental → Aquatic → Sediment	2.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.57%
Floodplain	Environmental → Terrestrial → Floodplain	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.81%
Loam	Environmental → Terrestrial → Soil → Loam	10.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.57%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1047580631	3300000364	Soil	VPRTKMTRHQLKERDEITTSLESFTELVVARKKEVTTGLIILAVLVLAIFGWRFYSSRRNAAVQAQLSQAISAFNDTVNIKSDKERYEKTIAEAQKTHDQYPSSTAGQIALYY
F24TB_137681042	3300000550	Soil	SFESVSGRFLVPRTKMTRHQLKEQDEITTSLQKATEFVVARQKELTIAAIAVAVIAIAVFGWRYYSSRRNASAQTQLSQAITIYNDTTNIKSDK
JGI10216J12902_1018469231	3300000956	Soil	VARTKMTRHQLKEQDEITTSLQTFTELVVARKREVTIGLIIVAGLAIGIFGWRYYSSRRNAAAQAQLSQAINIFNDTANIKSDKERYERTMAEAQKTHDQYRSLPAGSIALYYVALSQEGLGDT
JGI25382J43887_100696412	3300002908	Grasslands Soil	VPRTKMTRHELKEQDEITTSLQKFTEFVVLRKKEVTTGLTILAVLAIVIFGWSYYRSTRNANAQAHLSQAINIF
Ga0062593_1034216801	3300004114	Soil	VPRTKMTRHQLKEQDEITTSLQSFTEFVVARKKEFTTGLIVLAVVILAFFGWRFYSSRRNAAVQAQLGQAISTFNDTANIKSDKERYEKTVAEAQKTHDQYPSSNAGQIALYYVALSQEGLGDT
Ga0062590_1022457662	3300004157	Soil	VPRTKMTRHQLKEQDEITTFLERYTELIVARKKEVTIGLSALAVLVIAIFGWNFYSSRRNATAQVELSQAINIYNDTVNIKSDKERYEKTIAEAQKTHDRYPSLAAGTIALYYI
Ga0066683_105076481	3300005172	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTGAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTFNDTVNIK
Ga0066685_109344972	3300005180	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPIAN
Ga0066676_103891552	3300005186	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTGAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPISNIALYYVALSQEGLGNTAKATQTLQQVAEVGDASIKGVAQFA
Ga0065707_110248871	3300005295	Switchgrass Rhizosphere	VARTKMTRHQLKEQDEITTSLQTFTELVVARKREVTIGLIIVAGLAIGIFGWRYYSSRRNAAAQAQLSQAINIFNDTANIKSDKE
Ga0070670_1014950952	3300005331	Switchgrass Rhizosphere	VPRTKMTRHQLKEQDEITTSLERFTELVVARKKELLTGLIVLVVLVLGIFGWRFYSSRRNAAVQAQLSQAIGAFNDTVNIKSDKERYEKTIAEAQKTHDQYPSSTAGQIALYYMALSQEGLGDTAK
Ga0066388_1030163882	3300005332	Tropical Forest Soil	VARTKMTRHQLKEKDEITTSLQTFTELVVARKREVTIGLIVVAGLAIGIFGWRYYSSRRNAAAQAELSQAINIFNDTANIKSDKE
Ga0066388_1035824721	3300005332	Tropical Forest Soil	MTRHQLKEQDEITTSLQTFTELVVDRKREVTIGLIAVAVLVIAVFGWRYYSSRRNAAAQVQLSQAINIFNDTVNIKSDKERYERTIAEAQKTHDQYRSL
Ga0070667_1021364021	3300005367	Switchgrass Rhizosphere	VPRTKMTRHQLKERDEITTSLESFTELVVARKKELTTGLIVLAVLILAIFGWRFYSSRRNAAVQAQLSQAISAFNDTVNLKSDKERYEKTIVEAQKTHDQYPSSTA
Ga0070714_1012521972	3300005435	Agricultural Soil	VARTKMTRHQLKEQDEITSFFEKYTEIIIAKRKEVGIGIAAVAAVAIIFFAWSAYSSSRNTKAQAELSQVMNTYNDTTIKSDKERYQKTLAEAQKAHDDYPSLPAGSIALYYAALSQDGLGDT
Ga0070708_1012814151	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VPRTKMTRHELKEQDEITTSLQWFTEFVVLRKKEFTAGVTIAAALAIIIFGWSYYRSTRNTNASLELSQAINAFNDTVNIKSDKER
Ga0066686_106804651	3300005446	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEAQKT
Ga0066689_106088932	3300005447	Soil	VPRTKMTRHELKEQDEITTSLQKFSEFVVLRKKEVTTGLTIAAALAIVIFGWGYYRSVRNTNAQIQLSQAINTFND
Ga0066689_106903831	3300005447	Soil	VPRTKMTRHELKEQDEITTYLQKTTEFVVLRKKEFTAGLTILAALAIVIFGWSYYRSTRNAHAQAQLSQAVNTFNDTANIKSDKERYEKTIVEA
Ga0070699_1003954362	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VPRTKMTRHELKEQDEITTSLQKFSEFVVLRKKEVTTGLTIAAVLAIVIFGWSYYRSTRNTNASIQLSQAINTFND
Ga0066695_103125632	3300005553	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTGAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTFNDTVNIKSAKERYEKTIVEAQKTYDQYRSLPISNIALYYVALSQEGLGNTAKATQTLQQVAEVGDASIKGVAQFAMGAIYKKHGETQKAIDV
Ga0066698_107548962	3300005558	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEITTGLTIASVLAIAIFGWSYYRSNRNANAQAQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPI
Ga0066703_102987202	3300005568	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQAQLSQAINTFNDTINIKSDKERYE
Ga0066705_108426801	3300005569	Soil	VPRTKMTRHQLKEQDEITTSLHKFTDIAVAQKKEITIGLAAVAVLVIAFFGWSYYTSSRNARAQMQLSQAINIFNNTANIKSDKERYEKTIAEAQKVYDQYRSLPIASISQYYIALSQEGLGDR
Ga0066694_100385062	3300005574	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTFNDTVNIK
Ga0066903_1029396451	3300005764	Tropical Forest Soil	VPRTKMTRHQLKEQDEITTSLQTFTELVVARQKEVTIGLISLAVLVIAIFGWRYYSASRNAAAQAHLSQAISIFNDTTNIKSDPERYTRTIAEAQKTHDQYPSLPAGSIALYYVGLSQEGLGDT
Ga0066903_1071593451	3300005764	Tropical Forest Soil	VPRTKLTRHQLKEQDEITSFFEKYTELVIARKKEVTIGVAAIAAIVIIFFAWSYYSSSRNARAQAELSEAINTYNDTANIKSDKERYEKTIVLAQKTYADYRSLPVGNIALYYEALS
Ga0066651_103494162	3300006031	Soil	VPRTKMTRHELKEQDEITTSLQKFSEFVVLRKKEVTTGLTIAAALAIVIFGWGYYRSVRNTNAQIQLSQAINTFNDTVNIKSEKDRYEKAMAEAQKTYDQYRSLPMGTIGLYYVGLCQEGLGDTAKAVQTLQQVAQTG
Ga0070715_109469531	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VPRTKMTRHQLKEQDEITSFFEKYTELVIAKKKEVTIAVGAVAAIVIIFFAWSYYSSSRNARAQAELSDAINTYNDTANIKSDKERYEKTIALAQKTYDDYRSLPVGTIALYYEALSQEELGDTAKATQNLQEVMQRGDA
Ga0066665_102222971	3300006796	Soil	MTRHELKEQDEITTSLQKFSEFVVLRKKEVTTGLTIAAALAIVIFGWGYYRSVRNTNAQIQLSQAINTFNDTVNIKSEKDRYEKAMAEAQKTYDQYRSLPMGTIGLYYVGLCQEGLG
Ga0066659_110083191	3300006797	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEITTGLTIAAVLAIAIFGWSYYRSNRNANAQAQLSQAIHTFNDTVNIKSDKER
Ga0079220_109111781	3300006806	Agricultural Soil	VARTKMTRHQLKEQDEITSFFEKYTEVIIAKRKEVGIGVAAVAAVVIIFFAWSAYSSSRNAKAQAELSQVINTYNDTTIKSDKERYQKTLAEAQKAHDDYPSLSSGSIALYYAALSQDGLGDTAKAVQNL
Ga0075421_1004617971	3300006845	Populus Rhizosphere	VPRAKMTRHQLKEQDEITTSLQSFTALVVARKKELTIVLAAIAVLAVGIFGWRYYSTRRNLNAQNQLSQAIAIYNDTVNIKSDKERYERTIAEAQKTYDQYRSLPA
Ga0075421_1007200683	3300006845	Populus Rhizosphere	VARTKMTRHQLKEQDEITTSLQTFTELVVARKREVTIGLIIVAGLAIGIFGWRYYSSRRNAAAQAQLSQAINIFNDTVNIKSDKERYERTMAEAQKTHD
Ga0075431_1012796731	3300006847	Populus Rhizosphere	VARTKMTRHQLKEKDEITTSLQTFTELVVARKREVTIGLIIVAGLAIGIFGWRYYSSRRNAAAQAQLSQAINIFNDTANIKSDKERYERTMAEAQKTHD
Ga0075420_1012816021	3300006853	Populus Rhizosphere	VARTKMTRHQLKEQDEITTSLQTFTELVVARKREVTIGLIVVAALAIGIFGWRYYSSRRNAAAQVELSQAINIFNDTANIKSDKERYERTMAEAQKTHDKYRSLPAGSIALYYVALSQEGLGDTTKA
Ga0075434_1018794611	3300006871	Populus Rhizosphere	LPRTKMTRHQLKEQDEITTKLQTFLDLVVARKKELTTGLIVIAVLVIAVFGWRYFSSRRNAAAQAQLSQAITIYNDTANIKSDKERY
Ga0075434_1020408352	3300006871	Populus Rhizosphere	VPRTKMTRHQLKERDEITTSLESFTELVVARKKEVTTGLIILAVLVLAIFGWRFYSSRRNAAVQAQLSQAIGAFNDTVNIKS
Ga0075424_1024909051	3300006904	Populus Rhizosphere	VPRTKLTRHQLKEQDEITTSLQSFTELIVARRKEVTTGLVIIAVLVLAIFGWRLYANRRNAAAQAQLSQAINIYNDLTIKSDKERYEKTIVEAQKTHDQYPSLPA
Ga0075435_1010221472	3300007076	Populus Rhizosphere	VPRTKMTRHELKEQDEITTSLQKFSEFVVLRKKEVTTGLIIVVALAIVFFGWRYYRSTRNTNASIELSQAINTFNDTINIKSEKERYEKAMAEAQKTHDQYPSLPMGTIALYYVGLCQEGLGDTARAVQTL
Ga0099828_113658251	3300009089	Vadose Zone Soil	MTRHELKEQDEITTSLQKFTEFVVLYKKEFTAGLTVAALLAIVIFGWSYYRSSRNAKAEAQLSQAIDAFNGTTNIKSDKERFEKTLVAAQKTYDQYRSLPAGNMALYYVGLSQEGLGDTTKSVQSLQEVTERGDASVKAVAQFAL
Ga0111539_113719611	3300009094	Populus Rhizosphere	VPRTKLTRHQLKEQDEITTSLQSFTELIVARRKEVTTGLVIIAVLVLAIFGWRLYANRRNAAAQAQLSQAINIYNDLTIKSDKERYEKTIVEAQKTHDQYPSLPAGSIGLYF
Ga0111539_135387261	3300009094	Populus Rhizosphere	MTRHQLKEQDEITTKLQTFLDLVVARKKELTTGLIVIAVLFIAVFGWRYFSSRRNAAAQAQLSQAITIYNDTANIKSDKERYEKTIAEAQKTHDQYRSLPAGSIALYYVALSQEGF
Ga0099792_112424141	3300009143	Vadose Zone Soil	MSRHELKEQDEITSSLQKLTEFVVLYKKEFTAGLAVAALLAIAIFGWTFYRSSRNAKAEAQLSQAIDAFNDTTNIKSDKERYEKTLVAAQKTYDQYRSLPIGNMALYYVGLSQEGLGDTAKSVQSLQQVSDRGDS
Ga0111538_105318603	3300009156	Populus Rhizosphere	MTRHQLKEQDEITTSLQSFTALVVARKKELTIVLAAIAVLAVGIFGWRYYSTRRNLNAQNQLSQAIAIYNDTVNIKSDKERYERTIAEAQKTYDQYRS
Ga0075423_116457151	3300009162	Populus Rhizosphere	MTRHQLKEQDEITTSLHTFTELVVARKQEVTIGVIVIAVLLIGFFGWRFYSSRRSASAQTQLSQAINIFNDTANIKSEKERYERAMAEAQKTHDQYPSLPAGSIALYYVALSQEGLGDTA
Ga0075423_121638191	3300009162	Populus Rhizosphere	MTRHELKEQDEITTSLQKFSEFVVLRKKEVTTGLIIVVALAIVFFGWRYYRSTRNTNASIELSQAINTFNDTINIKS
Ga0105347_13031342	3300009609	Soil	MTRHQLKEQDEITTSIQTVTEALIAKKKELTIGLVVIVVLVLGIVGWRYFSSRRNSAAQAQLAQAIAIYNDTINIKTDKERYEKTIAEAQKTYDQYRSL
Ga0105059_10480642	3300009795	Groundwater Sand	MTRHQLKERDEITTSLQKFTEFVYARQKEVISGVAIVVVLGVAILGWNVYSSNRNANAQSQLTSAINTFNDTANIKSDKERYEKALAEAQKTYDNYRSLPS
Ga0126380_117795901	3300010043	Tropical Forest Soil	MTRQQLKEQDEITTSLQTFTEFVMARQKELLAALIGVAVLAIAFFGWSYYSSRRNANAQLMLSQAINIYNDTANIKSDKERYEKTIAEAQKTYDQYRSLPVGDIALYYIGLSQEGLGETAKAAQTLQQV
Ga0126384_108735652	3300010046	Tropical Forest Soil	MTRHQLKEQDEITTSLQTFTEFVVARQREFTIGLIAVAVVVLAVFGWSYYSSRRSAKAQLQLSHAIAIYNDTLNIKSDKERYEKTIAEAQKTYDQYPSLPAGSIALYYIGMSQEGLG
Ga0126384_113304301	3300010046	Tropical Forest Soil	MTRHQLKEQDEITSFFEKYTELIIAKKKEVGVGAAVVAAIAIVFFAWSAYSSSRNAKAQAELSQVINTYNDTTIKSDKERYAKTLAEAKRTHDDYQSLTAGSIALYYAALSQDGLGDTAKAVQDLQEVSQRGDASIKSVAQFALGAL
Ga0126384_122068381	3300010046	Tropical Forest Soil	MTRQQLKEQDEITTSLQTFTEFVMARQKELLTALIGVAVLAIAFFGWSYYSSRRNANAQLMLSQAINIYNDTTNIKSEKERYEKTIAEAQKTYDQYRSLAVGDIALYYIGLSQEGLGE
Ga0126382_108864901	3300010047	Tropical Forest Soil	MTRHQLKEQDEITTSLQTFTEFVVARKQELTIGLIIVSVLVIGFFGWRYYSSRRNAAAQAQLSQAINTFNDTVNIKSDKERYERTLAQAQKTHDQY
Ga0126382_113714291	3300010047	Tropical Forest Soil	MTRHQLKEQDEITTSLQKVTEFVVTRQKEVTIGLVAVAVLAIAFFSWRYYSSRRDANAQFQLAQAVNIYNDPTIKDKERYEKTIAEAQKTYDQYRSLPVGSMALYYIGLSQEGMGDTAKATQTLQEVIRRGDASIKAVGQFALG
Ga0127497_10589591	3300010109	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPIANIALYYVALSQEGLGDTAKATQTLQHVAEVGDPSIKGVAQFATGAIYKKHGETQKAI
Ga0127488_10306491	3300010122	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPIANIALYYVALSQEGLGDTAKATQTLQHVAEVGDPSIKGVAQFATGAIYKKHGET
Ga0134070_102630882	3300010301	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTGAAVLAIVIFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEA
Ga0134088_100048791	3300010304	Grasslands Soil	MTRHELKEQDEITTSLQKVTEFVMLRKKEVTTGLTIAAVLAIAIFGWSYYRSNRNSRAQTQLSQAIN
Ga0134109_104282671	3300010320	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTGAAVLAIVIFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPIANIALYYVALSQEGLGDTAKATQTLQHVAEVGDPSIKGVAQFATGAIYKKHGET
Ga0134064_100270011	3300010325	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEFTTALTVAAVLAIVIFGYRYYRSNRNATAQAQLSQAINTFNDTVNIKSDKERYEKTIVEAQKT
Ga0134065_100186912	3300010326	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTF
Ga0134063_102899231	3300010335	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEITTGLTIASVLAIAIFGWSYYRSNRNANAQAQLSQAIHTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPISNIALYYVALSQEG
Ga0126370_111236251	3300010358	Tropical Forest Soil	MTRHQLKEQDEITSFFEKYTELIIAKKKEVGVGVAVVAAIAIVFFVWSAYSSSRNAKAQAELSQVMSTYKDTTIKSDKERYEKTLAEAQKTHDDYPSLPAGSIALYYAALSQDGLGDTAKAV
Ga0126370_114306942	3300010358	Tropical Forest Soil	MTRHELKEQDEITTSLQKFTELVIRYKKEVTTGVSVVAALAIIIFGWSYYRSSRNARAEAELSQAIDAFNDTTNIKSDKERYEKTLAAAQ
Ga0126370_126638981	3300010358	Tropical Forest Soil	MTRHQLKEQDEITSFFEKYTELVIAKKKEVIIGVAAVAAVLIIFFAWSYYSSSRNARAQAELSDAINTYNDTVNIKSDKERYEKTIALAQKTHDDYRSLPVGNIALYYVA
Ga0126376_114677061	3300010359	Tropical Forest Soil	MTRHQLKEKDEITTSLQTFTELVVARKREVTIGLIVVAGLAIGIFGWRYYSSRRNAAAQAELSQAINIFNDTANIKADKERYERTMAEAQRTHDQY
Ga0126376_132398971	3300010359	Tropical Forest Soil	MTRHELKEQDEITTYLQKFTEFVVRYKREVTTGVSIAAALAIILFGWSYYRSSRNARAEAELSQAIDSFNDTTNIKSGKERYEKTLAAAQKT
Ga0126372_110128161	3300010360	Tropical Forest Soil	MTRHQLKEQDEITSFFEKYTELIIAKKKEVGVGVAVVAAIAIVFFAWSAYSSSRNAKAQAELSQVINTYNDTTIKSDKERYAKTLAEAKRTHDDYPSLSAGSIALYYAALSQDGLGDTAKAVQDLQE
Ga0126377_101363422	3300010362	Tropical Forest Soil	MTRHQLKEKDEITTSLQTFTELVVARKREVTIGLVVVAVLVIAIFGWRYYSSRRSAAAQAQLSQAINIFNDTVNIKSDKERYERTMADAQ
Ga0126379_105903241	3300010366	Tropical Forest Soil	MTRHQLKEQDEITSFFEKYTELVIARKKEVTIGVAAVAAVLIVFFTWSYYSSSRNARAQAELSDAINTYNDTVNIKSDKERYEKTIGLAQKTYDDYSSLP
Ga0126379_108820841	3300010366	Tropical Forest Soil	MTRHQLKEKDEITTSLQTFTELVVARKREVTIGLVVVGVLVIAIFGWRYYSSRRSASAQAQLSQAINIFNDTANIKSDKERYERTMAEAQKTHDQYRSLPAGSIALYYVALSQ
Ga0126381_1021292591	3300010376	Tropical Forest Soil	MTRHQLKEQDEITSFFEKYTELIIAKKKEVGIGVAAVAAIAIIFFAWSAYSSSRNAKAESELSQVMHTYDDTTIKSDKERYGKALAEAKRTHDDYPSLSAGSIALYYAALSQDGLGDTAKAVQD
Ga0126383_111646312	3300010398	Tropical Forest Soil	MTRHQLKEQDEITNFFEKYTELLIAKRKEVGIVVAVIAAVAIIYSAWSYYSSSRNARAQTELSQAISTYGDTTIKSDKERYGKTLAEAQKTYEDYGSLPAGKI
Ga0126383_122017521	3300010398	Tropical Forest Soil	MTRHQLKEQDEITSFFEKYTELVIARKKEVTIGVAAVAAIVIIFFAWSYYSSSRNARAQAELSDAINTYNDTANIKSDKERYEKTIALAQKTYADYRSLPVGNIALYYEALSQEGLGDTAKATQNLQEVMQRGDASVKGVAQFA
Ga0126383_136215331	3300010398	Tropical Forest Soil	MTRHQLKEQDEITTSLQNVTEFIVTRQKEVIIGLAAIAVLTIGFFSWRYYSSRRNANAQLQLAQAVNIYNDLTIKEKDRYEKTIAEAQKTYDQYRSLSAGKMGLYYIALSQEGLGDTAKATQTLQEVIQQ
Ga0134123_127356062	3300010403	Terrestrial Soil	MTRHQLKEQDEITTFLERYTELVVARKKEVTIGLSVLAVLVIAIFGWSFYSSRRNAAAQAQLSQAINIYNDTVNIKSDNERYEKTIAEAQKTHDQYASLPAG
Ga0137423_10019946	3300011430	Soil	MTRHQLKEQDEITTSIQTVTEALIAKKRELTIGLVVILVLVLGIVGWRYFSSRRNSAAQAQLAQAIAIYNDTINIKTDKERYEKTIAEAQKTYDQYRSLPAGSI
Ga0137421_12600671	3300012039	Soil	MTRHQLKEQDEITTSLQTFTELVVARKKQLLGALIAVAVLVIGFFGWSLYSSRRNAAAQEQLSLAINIFNDTTNIKSDKERFEKTIVEAQKTHDQYRSLPAGSIALYYIGLSQEGLGD
Ga0137388_108371421	3300012189	Vadose Zone Soil	MSRHELKEQDEITSYLQKSTEFVIRYKKEATTGLTIVAALVIIIFGWSYYRSSRNARAEAQLSQAIDTFNDTENIKSDKERFEKTLVAAKKTFDQYGSL
Ga0137365_102784942	3300012201	Vadose Zone Soil	MTRHQLKERDEITTSLQKFTELVYARQKEVITGVAIVVVLVIAIIGWNVYSSNRNANAQSQLAAAINIFNDTANIKSDKERYEKALAEAQKTYDNYRSLPVGVIA
Ga0137399_107177672	3300012203	Vadose Zone Soil	MTRHELKEQDEITTSLQKFTEFVVLRKKEVTTGLTIVAALAIVIFGWSYYRSTRNAHAQALLSQVINTFNDTTNIKSDK
Ga0137376_101247132	3300012208	Vadose Zone Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEFTTALTVAAVLAIVIFGYRYYRSNRNANAQAQLSQAINTFNDTINIKSHKERYEKTIVEAQ
Ga0137386_112490501	3300012351	Vadose Zone Soil	MTRHQLKEQDEITTWLQKFTEIAVARKKEITGGLAAIAVLAIVFFGWSYYSSSRNARAQMQLSQAISIFNNTASIKSDKEWYEKTI
Ga0137371_111897931	3300012356	Vadose Zone Soil	MTRHELKEQDEITTSLQKFTELVVRYKKEATTGIAAIAAIAIIIFGWTYYRTSRNARAEAELSQAIDAFNDTTNIKSDKERYEKTLAAAQKTYDQYRSLPAGNIALYYVGLSQDGLGDT
Ga0137361_117819321	3300012362	Vadose Zone Soil	MTRHELKEQDEITTSLQKFTEFVVLRKKEVTTGLTILAVLAIVIFGWSYYRSTRNANAQAHLSQAINIFNDTANIKSDKERYEKTIV
Ga0137361_118100682	3300012362	Vadose Zone Soil	MTRHQLKEQDEITTFLERYTELLVTYKKEVTVGLGVLAVLVIAIFGWRYYSARRDAAAQTQLSQAINIFNDTVNIKSDKE
Ga0134042_11956711	3300012373	Grasslands Soil	RRLLVPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEAQ*
Ga0137397_102201442	3300012685	Vadose Zone Soil	MTRHELKEQDEITTSLQKFTEFVVLRKKEVTASLTILAVLAIVIFGWSYYRSTRNANAQAQLSQAINTFNDTAN
Ga0137410_113090102	3300012944	Vadose Zone Soil	MTRHELKEQDEITTSLQKFTEFVVLRKKEVTTGLTIAAALAIVIFGWGYYRSVRNTNAQIQLSQAINTFNDTVNIKSDKDRYEKAMAEAQKTYAHYRSLPMGTIGLYYVRLCQEVLGDTA
Ga0126375_113211622	3300012948	Tropical Forest Soil	MTRHQLKEQDEITTSLQKVTEFVVTRQKEVTIGLAAVAVLAIAFFGWRYYSSRRDANAQLQLSQAVNLYNDLTIKDKERYEKTIAEAQKT
Ga0126375_115261451	3300012948	Tropical Forest Soil	MTRHQLKEQDEITTFLERYTELVVARKKEVTIGLSVVAVLAIAIFGWSYYSSRRKAAAQVQLSQAISIYNDTVNIKSDKERYEKTIAQAQKAHDQYPSLPAGTIALYFAGLSQEGLGDTAKAVQNLQE
Ga0126369_128914131	3300012971	Tropical Forest Soil	MTRHQLKEQDVITSFFEKYTELVIAKKKEVSIGLAAVAGIVIIFFAWSYYSSSRNARAQAELSDAINTYNDTVNIKSDKERYEKTIALAQKTHDDYRSLPIGNIALYY
Ga0126369_129954531	3300012971	Tropical Forest Soil	MTRHELKEQDEITTSLQKFTDFVVLHKKEVTTALTAAAVLAIVVFGYGYYRSNRNANAQAQLSQAINTFNDTVNIKSDK
Ga0157378_123035701	3300013297	Miscanthus Rhizosphere	MTRHQLKERDEITTSLESFTELVVARKKEVMTGLIVLAVLILAIFGWRFYSSRRNAAVQAQLSQAISAFNDTVNLKSDKERYEKTIAEAQKTHDQ
Ga0134081_103370291	3300014150	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPIANIALYYVALSQEGLGDTAKATQTLQHVAEVGDPSIKGVAQFA
Ga0134089_101060391	3300015358	Grasslands Soil	MTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTFNDTVNIKS
Ga0132257_1009528891	3300015373	Arabidopsis Rhizosphere	MTRHQLKEQDEITTSLQSFTALVVARKKELTIVLAAIAVLAVGIFGWRYYSTRRNLNAQNQLSQAIAIYNDTVNIKSDKERYERTIAEAQKTYDQYRSLPAGSIALYYIALSQEGLG
Ga0132255_1023714841	3300015374	Arabidopsis Rhizosphere	MTRHQLKERDEITTSLERFTELVVARKKELLTGLIVLVVLVLAIFGWRFYSSRRNAAVQAQLSQAIGAFNDTVNIKSDKERYEKTIAEAQKTHDQYPSSTAGQIALYYMALSQE
Ga0182038_103052232	3300016445	Soil	VPRTKMTRHELKEQDEITTSLQKFTEFVVARKKEVTTGVAIVAGLAIIIFGWSYYRSTRNANAEAQLSRAINSFNDTTNLKSDKERYGKALAEGQKTFDQYGSLPAGNIALYYVGLSQEGLGD
Ga0134112_103480011	3300017656	Grasslands Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPIANIALYYVALSQEGLGDTAKATQTLQHVAEAGDPS
Ga0134083_100792742	3300017659	Grasslands Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTI
Ga0066662_106742872	3300018468	Grasslands Soil	VPRTKMTRHQLKEQDEITTSLQSFTEIVVARKKEVTIGLTALAILVIAIFGWRYYSATRTANAETQLSQAINIYNDTANIKSDKERYERTIAEAQKAVDQYRSLPAGVIALYYVALGEEGLGE
Ga0066669_111978412	3300018482	Grasslands Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEITTGLTIAAVLAIAIFGWSYYRSNRNANAQAQLSQAIHTFNDTVNIKSDKERYEKKIV
Ga0066669_113725851	3300018482	Grasslands Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEFTTALTVAAVLAIVIFGYRYYRSNRNATAQAQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPIANIALYYVA
Ga0242665_101707811	3300022724	Soil	KEQDEITTSLQKFTEFVVRYKKELTTGVSIAAALAIIIFGWTYYRSTRNAKAEAELSQAIDAFNDTANIKSEKERYEKTLAAAQKTYDQYRSLLWAISRCITSG
Ga0207699_110851292	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VARTKMTRHQLKEQDEITSFFEKYTELVIAKKKEVTIGVAAVAAIVIIFFAWSYYSSSRNARAQAELSDAINTYNDTVNIKSDKERYEKTIALAQKTHDDYKSLPVGNIA
Ga0207660_105305281	3300025917	Corn Rhizosphere	MTRHQLKEQDEITTSLQTFTELLVEKKKEVTIGVSVVAALVIIIFGWSYYSSSRNARAQAELSQAIATYNDTANIKSDKERYEKTIAQAQKTHDDYSSLPVGSIALYYVALSQEGLGDTAKA
Ga0207662_109468612	3300025918	Switchgrass Rhizosphere	VPRTKMTRHQLKEQDEITTFLERYTELIVARKKEVTIGLSVLAVLVIAIFGWSFYSSRRNAAAQAQLSQAINTYNDTVNIRSDKERY
Ga0207661_112311452	3300025944	Corn Rhizosphere	VPRTKMTRHQLKEQDEITTSLQTFTELLVEKKKEVTIGVSVVAALVIIIFGWSYYSSSRNARAQAELSQAIATYNDTANIKSDKERYEKTIAQAQKTHDDYSSLPVGSIALYYVALSQEGLGDTAKAVQNLQD
Ga0209470_13396111	3300026324	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTGAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPISNIALYYVALSQE
Ga0209377_10096427	3300026334	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTGAAVLAIVIFGYGYYRSNRNANAQAQLSQAINTFNDTVNIKSAKERYEKTIVEAQKTYDQYRSLPISN
Ga0209378_12760741	3300026528	Soil	EITTSLQKFTDFVVLRKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQVQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPIANIALYYVALSQEGLGDTAKATQTLQHVAEVGDPSIKGVAQFATGAIYKKHGETQKAIDVYKQIYDRGGYSKAAVAYELASLYEANK
Ga0209806_10735982	3300026529	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEITTGLTIAAVLAIAIFGWSYYRSNRNANAQAQLSQAIHTFNDTVNIKSDKERYEKTIVEAQKTYDQYRSLPISNIALYYV
Ga0209056_102660042	3300026538	Soil	VPRTKMTRHELKEQDEITTSLQKFSEFVVLRKKEVTTGLTIAAALAIVIFGWGYYRSVRNTNAQIQLSQAINTFNDTVNIKSDKDRYEKAMAEAQKTYDQYRSLPMGTIGLYYVGLCQEGLGDTAKAA
Ga0209156_104098621	3300026547	Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLRKKEVTTALTGAAVLAIVIFGYGYYRSNRNASAQAQLSQAINTFNDTVNIKSDKERYEKTIVEAQKTHDQYRSLPIAKIALYYVALSQEGLGNTAKA
Ga0209474_105591561	3300026550	Soil	VPRTKLTRHQLKEQDEITTSLHKFTEIVVARKKEATIGLTILAVLVIAIFGWSFYRSRRNANAQAQLSQAITIYNDTANIKSDKERYEKTIAEAQKTYDQYRSLPVGSIALYYIGLGQEGLGDTAKAAQSLQEVI
Ga0209474_106501971	3300026550	Soil	VPRTRMTRHELKEQDEITTSLQKVTEFVMLRKKEVTTGLTIAAVLAIAIFGWSYYRSNRNARAQAQLSQAINTFNDTVNIKSDKERYEKTIIEAQKTYDQYRSVPISNIALYYVALS
Ga0209382_106264001	3300027909	Populus Rhizosphere	VPRAKMTRHQLKEQDEITTSLQSFTALVVARKKELTIVLAAIAVLAVGIFGWRYYSTRRNLNAQNQLSQAIAIYNDTVNIKSDKERYERTIAEAQKTYDQYRSLPAG
Ga0170824_1211481851	3300031231	Forest Soil	VPRTKLTRHQLKEQDEITSFFEKYSELLIARKREVTIGVSAVAALVIIFFAWSYYSSSRNARAQTELSDAINTFNDTTNIKSDKERYEKTIAQAQKTYSDYPSLAVGPIALYYEALSQEE
Ga0310915_102763572	3300031573	Soil	VPRTKMTRHELKEQDEITTSLQKFTEFVVARKKEVTTGVAIVAGLAIIIFGWSYYRSTRNANAEAQLSRAINSFNDTTNLKSDKERYGKALAEGQKTFDQYGSLPAGNIALYYVGLSQEGLGDTAKAVQ
Ga0307473_109440832	3300031820	Hardwood Forest Soil	VPRTKMTRHELKEQDEITTSLQKFTDFVVLHKKEVTTALTVAAVLAIVVFGYGYYRSNRNANAQAQLSQAINT
Ga0310917_108103261	3300031833	Soil	VPRTKMTRHELKEQDEITTSLQKFTEFVVARKKEVTTGVAIVAGLAIIIFGWSYYRSTRNANAEAQLSRAINSFNDTTNLKSDKERYGKALAEGQKTFDQYGSLPAGNIALYYVGLSQEGLGDTAKA
Ga0310913_105865062	3300031945	Soil	VPRTKMTRHELKEQDEITTSLQKFTEFVVRYKKEVTTSVTIAAGLAIIIFGWSYYRSSRNARAEAQLSQAIDIFNDTANIKSDKERYEK
Ga0307471_1012196221	3300032180	Hardwood Forest Soil	VPRTKMTRHELKEQDEITTSLQNFSEFVVLRKKEFTAGVTVVAALVIIIFGWSYYRSTRNTNASLELSQAINTFNDTVNIKSDKERYEKAMAEAQK
Ga0307472_1016125942	3300032205	Hardwood Forest Soil	VPRTKMTRHELKEQDEITTSLQKFTEFVVRYKKEVTTSVTIAAVLAIVILGWSYYRSSRNARAEAQLSQAIDTFNDTTNIKSDKERYEKTLAQAQKTYDQ
Ga0364929_0299645_2_298	3300034149	Sediment	MTRHQLKEKDEITTSLQKFTEFVYARKNEVIIGASVLVLVVLGIFGWNLFSTRRNANAQSELSQAIAIFNDTATIKSDKERYEKALAEAQKTYDRYPSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066164

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences