Basic Information | |
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Family ID | F066158 |
Family Type | Metagenome |
Number of Sequences | 127 |
Average Sequence Length | 49 residues |
Representative Sequence | MKNIKKWYLDYFDWNKDGKTNWWEYLIPIGIILLIEIIAEIIANWIV |
Number of Associated Samples | 81 |
Number of Associated Scaffolds | 127 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 60.63 % |
% of genes near scaffold ends (potentially truncated) | 7.87 % |
% of genes from short scaffolds (< 2000 bps) | 80.31 % |
Associated GOLD sequencing projects | 69 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.58 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (56.693 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (44.882 % of family members) |
Environment Ontology (ENVO) | Unclassified (93.701 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (99.213 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 48.00% β-sheet: 0.00% Coil/Unstructured: 52.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.58 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Marine Surface Seawater Aqueous Freshwater To Marine Saline Gradient Marine Seawater Marine Seawater Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_1000104911 | 3300000101 | Marine | MKWKKWMLDYFDWNNDGETNWWEYLIPISIILCIEVVAELIAMWIVR* |
JGI24006J15134_100149138 | 3300001450 | Marine | MKRKWKKWWLDYFDWNQDGQTNWWEYCIPFVVILIIEIIAEIVASWIY* |
JGI24006J15134_100164222 | 3300001450 | Marine | MKYWNKFFLRYFDWNADGVTNWWEYLIPISIVLLVEIIAEIIANWIV* |
JGI24006J15134_100235858 | 3300001450 | Marine | MVGKQWNKWWLNYFDWNQDGKTNWWEYLIPFGLILILEVIAEIIANLILKI* |
JGI24006J15134_100380407 | 3300001450 | Marine | MKHWKNLFLRYFDWNKDGVTNWWEYFIPVVIILLIEIIAELIASLII* |
JGI25128J35275_10472441 | 3300002488 | Marine | MKKSWKKWWLEYFDWNQDGKTNWWEYSIPFLVILIIEIIAEIIASWIY* |
JGI25134J35505_100418043 | 3300002518 | Marine | MKRSWKNWWLEYFDWNQDGQTNWWEYTIPFMIILIIEIIAEIITSW |
Ga0073579_15707392 | 3300005239 | Marine | MKNTWKKWWIQYFDWNQDGKTNWWEYTIPFIVILVIEIIAEIIASWIF* |
Ga0066853_101998681 | 3300005603 | Marine | MKRSWKNWWLEYFDWNQDGQTNWWEYTIPFMIILIIEIIAEIIARWIF* |
Ga0075441_100046417 | 3300006164 | Marine | MKRGWKKWWIEYFDWNKDGYTNWWEYAIPFVVIIIIEVIAEIIVKWIF* |
Ga0075441_102771801 | 3300006164 | Marine | MKNGWKSWWLKYFDWNKDGYTNWWEYCIPFIVIVIIEVIAEIIAKWIY* |
Ga0075443_102332923 | 3300006165 | Marine | MKKSWKKWWLEYFDWNQDGQTNWWEYTIPFIIILVIEIIAEIIARWIY* |
Ga0075446_100858762 | 3300006190 | Marine | MKKSWKKWWLEYFDWNQDGKTNWWEYFIPIGVILLIEVLAEIIAKFLLN* |
Ga0075445_100562092 | 3300006193 | Marine | MKKSWKKWWLEYFDWNQDGKTNWWEYFIPIGVILLIEVLAEIISKFLLN* |
Ga0098038_10119143 | 3300006735 | Marine | MKHWKKLFLRYFDWNSDGVTNWWEYLIPVGIVLLIEIMAEIIANWIV* |
Ga0098038_10988722 | 3300006735 | Marine | MKKSKWKKFWLEYFDWNNDGKINWWEYFIPFMFLILIEVIAEIIAQLILSL* |
Ga0098038_11345014 | 3300006735 | Marine | MKHWNKFFLRYFDWNQDGKTNWWEYLIPIIIILLVEIIAELVANWII* |
Ga0098038_11981172 | 3300006735 | Marine | MKKNWKKWWLEYFDWNQDGKTNWWEYSIPFFVILVIEIIAEIIASWIF* |
Ga0098037_11394473 | 3300006737 | Marine | MINNFKKWMLNYFDINKDGKTNWWEYLIPVLIILIIEVIAEIITNLIV* |
Ga0098037_11555872 | 3300006737 | Marine | MKKRKKNNWKKWMLDYFDWNKDGVTNWWEYLLPIGLILIVEIIAELVVQLIIY* |
Ga0098058_10622172 | 3300006750 | Marine | MKNKNNMKWKKLMLDYFDWNQDGETNWWEYLIPIGVILGIEILAEIIAQWIVG* |
Ga0098040_12606072 | 3300006751 | Marine | MKWKKLMLDYFDWNNDGQTNWWEYLIPIGIILSIEIIAEVIANWIVL* |
Ga0098039_11824532 | 3300006753 | Marine | MRNNWKRFWIDYFDWNNDGKTNWWEYLIPFIIILTIEIIAELITKLII* |
Ga0098039_13145591 | 3300006753 | Marine | MKRSWKNWWLEYFDWNQDGQTNWWEYTIPFIGILVLEIIAELIARWIF* |
Ga0098054_13477312 | 3300006789 | Marine | MKDNFWKKWWLQYFDWNKDGITNWWEYFIPFILSILLEVIAELITKLILG* |
Ga0098060_10290922 | 3300006921 | Marine | MKNKWKKWWLDYFDWNQDGKTNWWEYCIPFIVILLIEIIAELITKILI* |
Ga0098060_11539042 | 3300006921 | Marine | MKKNWKKWWLEYFDWNQDGKTNWWEYCIPFVLILIVEILAEIVASWIF* |
Ga0098036_12662122 | 3300006929 | Marine | MKHWNKFFLRYFDWNQDGKTNWWEYLIPIIIILLVEIIAELIANWIV* |
Ga0110931_10499562 | 3300007963 | Marine | MKKSWKKWWLEYFDWNQDGKTNWWEYCIPVVVVIIIEIIAEIIASCIF* |
Ga0098052_10997342 | 3300008050 | Marine | MNWKNWKKRNGKNMLYYFDWNKDGATNWWEYMIPAGIILGVEIIAEIIANWIVQ* |
Ga0114995_100755163 | 3300009172 | Marine | MKWKKWMLDYFDWNNDGETNWWEYLIPTSIILCIEVVAELIAMWIVR* |
Ga0114998_105195832 | 3300009422 | Marine | KRILMKRHWKKWWLEYFDWNKDGYTNWWEYCIPFVVIIIIEVIAEIIARWIY* |
Ga0115013_105226501 | 3300009550 | Marine | MKKSKWKRFWLEYFDWNNDGKTNWWEYLIPFILLILIEVMAEIIAQLILSL* |
Ga0115011_120486241 | 3300009593 | Marine | NWKKLFLKYFDWNQSGSIEWWEYLIPFSAVLIIEIIAELLAKIIIG* |
Ga0115000_100067615 | 3300009705 | Marine | MKNNWKKWWLTYFDWNRDGITNWWEYCIPFIIIVTIEVIAEIIARWIY* |
Ga0115000_103712852 | 3300009705 | Marine | MSKKKSSMKWKNWMLDYFDWNRDGQTNWWEYLIPLSIIVGIEVLEELIAQWIVT* |
Ga0115012_102355043 | 3300009790 | Marine | MKHWNKWFLRYFDWNDDGKTNWWEYFIPIIIILLVEIIAELVANWIV* |
Ga0098043_11840052 | 3300010148 | Marine | MKHWKKFFLKYFDWNDDGITNWWEYLIPIGIILLVEILAEIIANWIV* |
Ga0098049_10177776 | 3300010149 | Marine | MKKTRKNNWKKWMLDYFDWNKDGVTNWWEYLLPIGLILIVEIIAELVVQLIIY* |
Ga0098049_11349982 | 3300010149 | Marine | MRNKWNKWMLDYFDVNGDGIVNWWEYLIPITVVLLIEIIAELIVKLIF* |
Ga0098061_13193982 | 3300010151 | Marine | MKRSWKNWWLEYFDWNQDGQTNWWEYTIPFILILVIEIIAEIIASWIF* |
Ga0098059_10317792 | 3300010153 | Marine | MNWKNWKKRNGKNMLYYFDWNKDGATNWWEYMIPVGIILGVEIIAEIIANWIVQ* |
Ga0133547_100084796 | 3300010883 | Marine | MSKKKSSMKWKNWMLDYFDWNRDGQTNWWEYLIPLSIIVGIEVLAELIAQWIVT* |
Ga0133547_106210285 | 3300010883 | Marine | MKRHWKKWWLEYFDWNKDGYTNWWEYCIPFVVIIIIEVIAEIIARWIY* |
Ga0114934_102993912 | 3300011013 | Deep Subsurface | MKKNTWKKWWLEYFDWNRDGITNWWEYCIPIAIIIFIEIIAEIIANWIV* |
Ga0160423_103532002 | 3300012920 | Surface Seawater | MKKSNKNNWKSWMLNYFDWNGDGVTNWWEYLIPIGLILIIEIIAELIVQLAIY* |
Ga0163110_110241221 | 3300012928 | Surface Seawater | MRKSWKRWWLDYFDWNQDGKTNWWEYSIPFFVILVIEIIAEIIASWIY* |
Ga0163110_117641231 | 3300012928 | Surface Seawater | MKNIKKWYLDYFDWNKDGETNWWEYFIPIGIILIIEIIAEIIANWIV* |
Ga0163111_108438483 | 3300012954 | Surface Seawater | MKRSWKKWWIEYFDWNQDGKTNWWEYTIPFIVILIIEIIAEIVASWIY* |
Ga0180120_103661052 | 3300017697 | Freshwater To Marine Saline Gradient | MKNTWKKWWIQYFDWNQDGKTNWWEYTIPFIVILVIEIIAEIIASWIF |
Ga0181372_10679472 | 3300017705 | Marine | MKKRKKNNWKKWMLDYFDWNKDGATNWWEYMIPAGIILGVEIIAEIIANWIVQ |
Ga0181387_11077382 | 3300017709 | Seawater | MKNIRKWFLHYFDWNNDGKTNWWEYLIPIGIILLIEIIAEIVAQWIVY |
Ga0181375_10759412 | 3300017718 | Marine | MKNKWKKWWLDYFDWNGDGKTNWWEYLIPFIIFITLEIII |
Ga0181383_11367461 | 3300017720 | Seawater | MKNIRKWFLHYFDWNNDGKTNWWEYLIPIGIILLIEIIAEIVAQWIIY |
Ga0181383_12174592 | 3300017720 | Seawater | MKNKYWKKWFLNYFDWNNDGQTNWWEWFIPLLIILFLEIIAELIANWIIS |
Ga0181416_10893121 | 3300017731 | Seawater | MKNIRKWFLHYFDWNNDGKTNWWEYLIPIGIILLIEIIAEIVAQ |
Ga0181416_11345112 | 3300017731 | Seawater | MNKKGSKMKWKKWMLDYFDWNQDGETNWWEYLIPISIILGIEIIAEIIANWIV |
Ga0181428_11167611 | 3300017738 | Seawater | NERIRSCMSKNKNIKKWNKLMLDYFDWNNDGETNWWEYLIPITVIITIEIIAEIIANWIL |
Ga0181393_11272291 | 3300017748 | Seawater | MKNKWKKWWLDYFDWNQDGKTNWWEYCIPFIVILLIEIIAELITK |
Ga0181405_10887073 | 3300017750 | Seawater | MKHWNKFFLRYFDWNKDGKTNWWEYFLPIIIILLVEIIAELVANWIL |
Ga0181382_11745641 | 3300017756 | Seawater | NKWKKWWLDYFDWNNDGITNWWEYIIPFVAILFIEIMAELIAQVILN |
Ga0181420_10054654 | 3300017757 | Seawater | MKWKKWMLDYFDWNQDGETNWWEYLIPISIILGIEIIAEIIANWIV |
Ga0181420_10276025 | 3300017757 | Seawater | MKKRKKNNWKTWMLDYFDWNEDGVTNWWEYLIPLGLVLIIEIIAELLTNLII |
Ga0181420_11145742 | 3300017757 | Seawater | MKHWNKFFLKYFDWNNDGKTNWWEYLIPIGIILLIEIIAEIVAQWIIY |
Ga0181413_12275602 | 3300017765 | Seawater | CMKHWNNWFLRYFDWNKDGVTNWWEYFIPIGIILLVEIIAEIVAQWIVY |
Ga0187217_11366821 | 3300017770 | Seawater | MKNKWKKWWLDYSDWNQDGKTNWWEYCIPFIVILLIEIMAELITKILI |
Ga0181386_11251581 | 3300017773 | Seawater | MKKSWKKWWLEYFDWNQDGKTNWWEYSIPFLVILIIEIIAEIIASWIF |
Ga0181432_10061484 | 3300017775 | Seawater | MRHWKKLMIDYFDWNEDGKTNWWEYLIPIGLIFLIEIIAELIAQWIVR |
Ga0181432_10122453 | 3300017775 | Seawater | MKHWKKWWIEYFDWNQDGKTNWWEYLIPIGIVLTIEILAEFLAQWIIR |
Ga0181432_10186995 | 3300017775 | Seawater | MKHWKRFFLRYFDWNEDGITNWWEYFIPIGIILLIEIIAEIIANWIV |
Ga0181432_10207194 | 3300017775 | Seawater | MKHWKRFFLRYFDWNRDGITNWWEYLIPIFIIIIIEILAEIIANWIIL |
Ga0181432_10212084 | 3300017775 | Seawater | MDYMKNKNGHMKWKKLMLDYFDWNNDGQTNWWEYLIPIGIILLVEIIAEIIAKLIVG |
Ga0181432_10374843 | 3300017775 | Seawater | MKHWNRFFLKYFDWNKDGITNWWEYLIPIGLILIIEILAELVAKIVLG |
Ga0181432_10565482 | 3300017775 | Seawater | MKKWNKFFIDYFDWNKDGVTNWWEYLIPIGIILAIEVLAELIARCI |
Ga0181432_10572133 | 3300017775 | Seawater | MKHWKRFFLKYFDWNEDGKTNWWEYLIPIGIILLVELIAEIVANWIV |
Ga0181432_10636194 | 3300017775 | Seawater | MNKMKSKNKLKKFFLDYFDWNHDGITNWWEYLIPIFIILTIEVIAEIIAHIVYLQIF |
Ga0181432_10823262 | 3300017775 | Seawater | MKRAWKKWWITYFDWNQDGKTNWWEYAIPFIIILIIEVIAELFARWIF |
Ga0181432_11971811 | 3300017775 | Seawater | MKTTNKFKKFFLDYFDWNRDGITNWWEYLIPVFIILGIEVIAELIAHIIYKSFF |
Ga0181432_12698382 | 3300017775 | Seawater | MNKMKTTDKFKKFFLDYFDWNRDGTTNWWEYLIPFFIILGIEVMAELIAHIIYNLFF |
Ga0211532_101003651 | 3300020403 | Marine | MKNKKNSWKEWWLDYFDWNKDGITNWWEYLIPFGIVLFIEIIAELIASSII |
Ga0211532_101225524 | 3300020403 | Marine | MKHWNKFFLKYFDWNDDGVTNWWEYLIPIIIILLVEIIAELVANWIV |
Ga0211532_103236242 | 3300020403 | Marine | MKHWKKFFLKYFDWNDDGVTNWWEYLIPVGIVLLVEILAEIIANWIV |
Ga0211699_100403662 | 3300020410 | Marine | MKHWNKFFLRYFDWNSDGVTNWWEYFIPIGIILLVEIIAEIIANWLV |
Ga0211699_101121572 | 3300020410 | Marine | MKNKGSKMKWKKWMLDYFDWNQDGETNWWEYLIPIGLVLAVEIIAEIIANWIV |
Ga0211699_101919011 | 3300020410 | Marine | MKNIKKWYLDYFDWNKDGKTNWWEYLIPIGIILLIEIIAEIIANWIV |
Ga0211699_104254931 | 3300020410 | Marine | MKKSWKKWWLDYFDWNQDGKTNWWEYLLPFLVILIIEIIAELIASWIF |
Ga0211576_102646612 | 3300020438 | Marine | MSKNKNIKKWNKLMLDYFDWNNDGETNWWEYLIPITVIITIEIIAEIIANWIL |
Ga0211695_102827722 | 3300020441 | Marine | MKKSKWNKFMLDYFDFNRDGQTNWWEYLIPIIIVLVIEIIAEIIAGALV |
Ga0211559_100773102 | 3300020442 | Marine | MENNWKKWWLDYFDWNADGTTNWWEYLIPFIIVLGIEIIAEIVANLIV |
Ga0211643_100338082 | 3300020457 | Marine | MKKSKWRKFWLEYFDWNNDGKINWWEYFIPFMFLILIEVIAEIIAQLILSL |
Ga0211643_104452282 | 3300020457 | Marine | MRKKWKKWWLDYFDWNQDGKTNWWEYLIPFGIVLIIEIIAELISNLII |
Ga0211543_102081642 | 3300020470 | Marine | MKWKKWMLDYFDWNQDGETNWWEYLIPIGLVLAVEIIAEIIANWIV |
Ga0211543_104271742 | 3300020470 | Marine | MKKNWKKWWIDYFDWNQDGKTNWWEYFIPLGIILALEIFAELVANLIVNF |
Ga0211543_104703713 | 3300020470 | Marine | MKHWNKWFLRYFDWNDDGYTNWWEYFIPIIIILIVEIIAELIANWII |
Ga0211543_104853562 | 3300020470 | Marine | MRKNWKKWWLDYFDWNQDGVTNWWEYTIPFIGILAIEIIAEIIASWIF |
Ga0211625_104287342 | 3300020473 | Marine | MKKSWKKWWIEYFDWNQDGKTNWWEYTIPFIAILIIEIIAEIIASWIF |
Ga0211547_106457032 | 3300020474 | Marine | MSKNKNSKKWNKLMLDYFDWNNDGETNWWEYLIPITVIITIEIIAEIIANWIL |
Ga0206123_104479511 | 3300021365 | Seawater | MKKNWKKWWLEYFDWNQDGKTNWWEYCIPFVLILIVEILAEIVASWIF |
Ga0208920_10483592 | 3300025072 | Marine | MSRDNKKKWNKLMLDYFDWNNDGETNWWEYLIPVTVVIIIEVIAEIIANWIL |
Ga0208157_10089572 | 3300025086 | Marine | MKHWKKLFLRYFDWNSDGVTNWWEYLIPVGIVLLIEIMAEIIANWIV |
Ga0208010_10077836 | 3300025097 | Marine | MKRSWKNWWLEYFDWNQDGQTNWWEYTIPFILILVIEIIAEIIASWIF |
Ga0208669_10587152 | 3300025099 | Marine | MKNKWKKWWLDYFDWNQDGKTNWWEYCIPFIVILLIEIIAELITKILI |
Ga0209349_10266303 | 3300025112 | Marine | MKGSWKRFFLKYFDWNEDGMTNWWEYFIPFVIILIIEIFAELFANTIASLF |
Ga0209535_10475694 | 3300025120 | Marine | MKYWNKFFLRYFDWNADGVTNWWEYLIPISIVLLVEIIAEIIANWIV |
Ga0208919_12073521 | 3300025128 | Marine | MKSWNKWFLRYFDWNDDGITNWWEYLLPIGLILIVEIIAELVVQLIIY |
Ga0209232_10842262 | 3300025132 | Marine | MKKSWKKWWLEYFDWNQDGKTNWWEYSIPFLVILIIEIIAEIIASWIY |
Ga0208299_11218202 | 3300025133 | Marine | MNWKNWKKRNGKNMLYYFDWNKDGTTNWWEYMIPVGIILGVEIIAEIIANWIVQ |
Ga0209634_11099242 | 3300025138 | Marine | MKKKWQKWWLDYFDWNSDGKTNWWEYFLPLLIILSIEIVAELIANFILN |
Ga0209634_13362172 | 3300025138 | Marine | MKRNKNWKKWMLEYFDWNNDGETNWWEYLIPFAIIIGIEVIAELIANLITL |
Ga0209337_10062358 | 3300025168 | Marine | MVGKQWNKWWLNYFDWNQDGKTNWWEYLIPFGLILILEVIAEIIANLILKI |
Ga0209337_10233358 | 3300025168 | Marine | MKRKWKKWWLDYFDWNQDGQTNWWEYCIPFVVILIIEIIAEIVASWIY |
Ga0209337_10985304 | 3300025168 | Marine | MEMKKKWAKWWLDYFDWNGDGKTNWWEYSFPLLIVLLIEIIAELIANFILK |
Ga0209337_11713493 | 3300025168 | Marine | MKKSWKKWWLQYFDWNQDGQTNWWEYCIPFVIILVIEIIAEIIASWIY |
Ga0208545_10485553 | 3300025806 | Aqueous | MKWKKWMLDYFDWNNDGETNWWEYLIPISIILCIEVVAELIAMWIVR |
Ga0209384_10477174 | 3300027522 | Marine | MKNGWKSWWLKYFDWNKDGYTNWWEYCIPFIVIVIIEVIAEIIAKWIY |
Ga0209384_10941971 | 3300027522 | Marine | MKRGWKKWWIEYFDWNKDGYTNWWEYAIPFVVIIIIEVIAEIIVKWIF |
Ga0209383_11897172 | 3300027672 | Marine | MKKSWKKWWLEYFDWNQDGKTNWWEYFIPIGVILLIEVLAEIISKFLLN |
Ga0209383_12039252 | 3300027672 | Marine | MKNSWKQWWVTYFDWNQDGRTNWWEYCIPFVIVLIIEVIAEIIVKWIF |
Ga0209279_100058807 | 3300027771 | Marine | MKNGWKQWWVTYFDWNQDGRTNWWEYCIPFVIVLIIEVIAEIIVKWIF |
Ga0209830_100450602 | 3300027791 | Marine | MKWKKWMLDYFDWNNDGETNWWEYLIPTSIILCIEVVAELIAMWIVR |
Ga0209091_100175684 | 3300027801 | Marine | MKNNWKKWWLTYFDWNRDGITNWWEYCIPFIIIVTIEVIAEIIARWIY |
Ga0209091_103381442 | 3300027801 | Marine | MSKKKSSMKWKNWMLDYFDWNRDGQTNWWEYLIPLSIIVGIEVLAELIAQWIVT |
Ga0256382_10353202 | 3300028022 | Seawater | MKHWNRFFLRYFDWNKDGVTNWWEYFIPIGIILLVEIIAEIIANWIV |
Ga0257110_10970834 | 3300028197 | Marine | MKHWKNLFLRYFDWNKDGVTNWWEYFIPVVIILLIEIIAELIASLII |
Ga0183748_10068565 | 3300029319 | Marine | MKWQKWMLDYFDWNQDGKTNWWEYLIPVSIILGIEIIAEIIANYIV |
Ga0183748_10305282 | 3300029319 | Marine | MKWQKWMLDYFDWNQDGETNWWEYLIPVGIILTIEIIAEIVANWIV |
Ga0183755_100290011 | 3300029448 | Marine | MKNTWKKWWIQYFDWNQDGKTNWWEYTIPFVVILIIEIIAEIIASWIF |
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