Metagenome Family F066066

Basic Information
Family ID	F066066
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	65 residues
Representative Sequence	NLTARYSLGFALAESEVDDGRMHGLEVRVKAKDEKGKNRKLLVSSRQGYYMSSTVPKEAAAKAQ
Number of Associated Samples	104
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.78 %
% of genes near scaffold ends (potentially truncated)	27.56 %
% of genes from short scaffolds (< 2000 bps)	27.56 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Most Common Taxonomy
Group	Unclassified (73.228 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.449 % of family members)
Environment Ontology (ENVO)	Unclassified (48.819 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (75.591 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.52% β-sheet: 4.35% Coil/Unstructured: 89.13%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01887	SAM_HAT_N	28.35
PF09907	HigB_toxin	7.09
PF00285	Citrate_synt	6.30
PF01381	HTH_3	4.72
PF07676	PD40	4.72
PF01592	NifU_N	1.57
PF00266	Aminotran_5	1.57
PF13426	PAS_9	0.79
PF08239	SH3_3	0.79
PF00408	PGM_PMM_IV	0.79
PF01924	HypD	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	28.35
COG0372	Citrate synthase	Energy production and conversion [C]	6.30
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.79
COG0409	Hydrogenase maturation factor HypD	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
All Organisms	root	All Organisms	26.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
cellular organisms	root	All Organisms → cellular organisms	26.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.57 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	5.51 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.94 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.57 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	4.72 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.57 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	4.72 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.94 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.79 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	3.15 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.94 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.57 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.79 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	3.15 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.94 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.57 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.79 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.23 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	3.15 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.94 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.57 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.79 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_11007257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300005289\|Ga0065704_10397908	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005289\|Ga0065704_10716156	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005294\|Ga0065705_10404817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	861	Open in IMG/M
3300005333\|Ga0070677_10641876	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300005356\|Ga0070674_101482880	Not Available	609	Open in IMG/M
3300005364\|Ga0070673_100439404	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300005547\|Ga0070693_100319981	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005548\|Ga0070665_101432631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	700	Open in IMG/M
3300005563\|Ga0068855_101610301	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005618\|Ga0068864_101394803	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	702	Open in IMG/M
3300005719\|Ga0068861_100058206	All Organisms → cellular organisms → Bacteria → Acidobacteria	2954	Open in IMG/M
3300006755\|Ga0079222_11339779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300006755\|Ga0079222_12540276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300006806\|Ga0079220_10906775	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	685	Open in IMG/M
3300006954\|Ga0079219_11993706	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300009011\|Ga0105251_10529337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	553	Open in IMG/M
3300009100\|Ga0075418_12944550	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	519	Open in IMG/M
3300009148\|Ga0105243_10978925	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300009148\|Ga0105243_11058056	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300009162\|Ga0075423_12000510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	627	Open in IMG/M
3300010045\|Ga0126311_10105315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1944	Open in IMG/M
3300010375\|Ga0105239_10807416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	1075	Open in IMG/M
3300010399\|Ga0134127_10212703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1807	Open in IMG/M
3300010399\|Ga0134127_10568766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1157	Open in IMG/M
3300012045\|Ga0136623_10474285	Not Available	527	Open in IMG/M
3300012212\|Ga0150985_120025277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300013100\|Ga0157373_10504675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	874	Open in IMG/M
3300021445\|Ga0182009_10400077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	709	Open in IMG/M
3300025900\|Ga0207710_10678264	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300025936\|Ga0207670_11684649	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300025942\|Ga0207689_11038268	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300026035\|Ga0207703_11695107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300026095\|Ga0207676_10809781	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300026116\|Ga0207674_10466474	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1220	Open in IMG/M
3300027873\|Ga0209814_10359260	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	59.06%
Environmental	Environmental	40.94%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	59.06%
Terrestrial	Environmental → Terrestrial	39.37%
Aquatic	Environmental → Aquatic	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.26%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Marine	Environmental → Aquatic → Marine	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.32%
Loam	Environmental → Terrestrial → Soil → Loam	14.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.94%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.09%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.30%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.57%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.57%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_110072571	3300000363	Soil	RQDYATGLSRIIGNLTARYSLGFTLEENETDDGKVHALEVRVKAKDEKGKTRKLLVSSRQGYYMSSTDPKDTNTRAQ*
JGI1027J11758_126359091	3300000789	Soil	LAQIIGNLTARYSLGFALAEDEIDDGRMHALEVKVNTKDEKGRNRKLLVSSRQGYYMSSVAPKDAAARAQ*
Ga0055440_101184872	3300004020	Natural And Restored Wetlands	FALAENENDDGKMHSLEVRVRAQDDKGNARKLLVSSRQGYYMSTAAPKATATVKAQ*
Ga0062589_1005924202	3300004156	Soil	LSRIIGNLTARYSLGFALAEEETDDGRMHSLEVRVKAPDEKGKKRKLQVSSRQGYYMASTLPKDAAAKAQ*
Ga0062589_1007187731	3300004156	Soil	IIGNLTARYSLGFTLAENETDDGRLHQLEVRVKAPDEKGKKRKLLVSSRQGYYMTSAATKDVRASAQ*
Ga0062594_1010273772	3300005093	Soil	GLSRIIGNLTARYSLGFALAEDEVDDGNMHGLEVRVKAKDDKGKTRKLLVSSRQGYYMSSIGPKDTAAKAQ*
Ga0065704_103979082	3300005289	Switchgrass Rhizosphere	ESEIDDGRMHALQVRVNAKDDKGKSRKLLVSSRQGYYMSSTLPKDAAAKAQ*
Ga0065704_107161562	3300005289	Switchgrass Rhizosphere	DDGRMHSLEVRVKAPDEKGKKRKLQVSSRQGYYMASTLPKDAAVKAQ*
Ga0065705_104048171	3300005294	Switchgrass Rhizosphere	DYGTGLSRIIGNLTARYSLGFTLAENETDDGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTTAAQKDVRASAQ*
Ga0070676_107239842	3300005328	Miscanthus Rhizosphere	RIIGNLTARYSLGFALAENETDDGRLHSLEVKVQAKDEKGKKRKLLVSSRQGYYMSNAMPRDTSTRAQ*
Ga0070690_1009193771	3300005330	Switchgrass Rhizosphere	IGNLTARYSLGFTLDENETDDGRMHALEVRVKARDEKGKNRKLLVSSRQGYYMSTAGPKDVSASAQ*
Ga0066388_1071264142	3300005332	Tropical Forest Soil	NLTARYSLGFALAENENDDGRMHNLEVRVNAKDEKGKTRKLQVSSRQGYYMSSTLPKDAAAKAQ*
Ga0070677_106418762	3300005333	Miscanthus Rhizosphere	AGLSRIIGNLTARYSLGFALAEDEVDDGNMHGLEVRVKAKDDKGKTRKLLVSSRQGYYMSSIGAKDTAAKAQ*
Ga0070666_114233362	3300005335	Switchgrass Rhizosphere	LTARYSLGFTLEENETDDGKMHALEVRVKAKDEKGKTRKLLVSSRQGYYMSSTDPKDTNARAQ*
Ga0070682_1011955851	3300005337	Corn Rhizosphere	LTARYSLGFALAEDEVDDGRMHSLEVRVKAQDLKGKTRKLQVSSRQGYYMSSTIPKEAAAKAQ*
Ga0070689_1019660711	3300005340	Switchgrass Rhizosphere	YSAGLSRVIGNLTARYSLGFALAEDETDDGRLHSLEVRVQAKDEKGKKRKLLVSSRQGYYMSSAIPRDATTRAQ*
Ga0070689_1021643331	3300005340	Switchgrass Rhizosphere	IIGNLTARYSLGFALAEDETDDGRMHNLEVRVKAQDEKGKTRKLLVSSRQGYYMSSTLPKDAAAKAQF*
Ga0070668_1015811902	3300005347	Switchgrass Rhizosphere	LGFTLDENETDDGRMHALEVRVKARDEKGKNRKLLVSSRQGYYMSTAGPKNVSASAQ*
Ga0070669_1000300041	3300005353	Switchgrass Rhizosphere	NLTARYSLGFALAEDEIDDGRMHSLEVRVKAQDEKGKTRKLQVSSRQGYYMSSTIPKDAAAKAQF*
Ga0070675_1016834111	3300005354	Miscanthus Rhizosphere	ALAEDETDDGRLHSLEVRVQAKDEKGKKRKLLVSSRQGYYMSSAIPRDATTRAQ*
Ga0070671_1019272491	3300005355	Switchgrass Rhizosphere	LAEIIGNLTARYSLGFALAENEIDDGRMHALEVRVNAKDEKGRNRKLLISSRQGYYMSSLAPKDATSASAKP*
Ga0070674_1014828801	3300005356	Miscanthus Rhizosphere	LAENEMDDGRMHGLEVRVKAQDEKGKSRKILVSSRQGYYMSTAAPAQSAQAK*
Ga0070673_1004394043	3300005364	Switchgrass Rhizosphere	GAGLQRIIGNLTARYSLGFALAENELDDGRMHSLEVRVRTKDEKGKSRKLLVSSRQGYYMSSTLPKDAAARAQ*
Ga0070688_1003613731	3300005365	Switchgrass Rhizosphere	LGFALAEDETDDGRLHSLEVRVQAKDEKGKKRKLLVSSRQGYYMSSAIPRDATTRAQ*
Ga0070703_105479661	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	RIIGNLTARYSLGFALAENELDDGRMHSLDVRVKAKDEKGKSRKLLVSSRQGYYMSSTLPKDTAAKAQ*
Ga0070694_1001666713	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	TARYSLGFALAEDEVDDGRMHSLEVRVKAQDQKGKTRKLQVSSRQGYYMSSTIPKEAAAKAQ*
Ga0070694_1012961961	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ARYSLGFALAEDEMDDGRMHSLEVRVKAKDEKGKNRKLLVSSRQGYYMSSVAPKDTAAKAQ*
Ga0070684_1023627281	3300005535	Corn Rhizosphere	TARYSLGFALAEEENDDGRMHSLEVRVNAKDEKGKTRKLQVSSRQGYYMSSTAPKDAAAKAQ*
Ga0070697_1008894961	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GLSKIIGNLSARYSLGFTLAEQENDDDRLHALEVRVKAKDEKGKSRKLAVSSRQGYYMSTTVPKEAAATKAQ*
Ga0068853_1012743621	3300005539	Corn Rhizosphere	RYSLGFALAENETDDGRLHSLEVKVQAKDEKGKKRKLLVSSRQGYYMSNAMPRDTSTRAQ
Ga0068853_1018246142	3300005539	Corn Rhizosphere	ARYSLGFALAEDEMDDGKMHSLQVRVKAKDEKGKTRKLLVSSRQGYYMSSVAPKDTAAKAQ*
Ga0068853_1021880122	3300005539	Corn Rhizosphere	GFTLDENETDDGRMHALEVRVKARDEKGKNRKLLVSSRQGYYMSTAGPKNVSASAQ*
Ga0070672_1011318761	3300005543	Miscanthus Rhizosphere	EIIGNLTARYSLGFALAENEIDDGRMHALEVRVNAKDEKGRNRKLLISSRQGYYMSSLAPKDATSASAKP*
Ga0070695_1010333952	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ARYSLGFALAEDEVDDGRMHTLEVRVKAEDQKGKTRKLQVSSRQGYYMSSTVPKEAAAKTQ*
Ga0070693_1003199814	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	DDGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTTAEPKDVRASAQ*
Ga0070665_1014326312	3300005548	Switchgrass Rhizosphere	GFALAEDEVDDGNMHGLEVRVKAKDDKGKTRKLLVSSRQGYYMSSIGPKDTAAKAQ*
Ga0068855_1016103012	3300005563	Corn Rhizosphere	FTLAENETDDGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTMTATKDVRASAP*
Ga0068859_1024391521	3300005617	Switchgrass Rhizosphere	SRIIGNLTARYSLGFALAESEIDDGRMHSLEVRVKAKDDKGKTRKLEVSSRQGYYMSSTVPKEAAAKAQ*
Ga0068864_1013948031	3300005618	Switchgrass Rhizosphere	GRAKDYSTGLERIIGNLTARYSLGFALAEDEVDDGNMHALEVRVNAKDEKGKGRKLLVSSRQGYFMSSVGPKNTARAQ*
Ga0068864_1018748921	3300005618	Switchgrass Rhizosphere	AGLSKIIGNLTARYSLGFALAEDEVDDGRMHSLEVRVKAQDQKGKTRKLQVSSRQGYYMSSTIPKEAAAKAQ*
Ga0068861_1000582061	3300005719	Switchgrass Rhizosphere	KDYGVGLSQIIGNLTARYSLGFALAEDEIDDGRMHSLEVRVKAQDEKGKTRKLQVSSRQGYYMPKEAAAKAQF*
Ga0068860_1011452702	3300005843	Switchgrass Rhizosphere	RYSLGFALAEDEIDDGRMHSLEVRVKAPDEKGKTRKLQVSSRQGYYMSSTIPKDVATKAQ
Ga0068862_1011372411	3300005844	Switchgrass Rhizosphere	RIIGNLTARYSLGFALAEDEVDDGRMHSLEVRVKAQDQKGKSRKLQVNSRQGYYMSSTVPKEAAAKAQ*
Ga0066651_104469431	3300006031	Soil	NLTARYSLGFALAESEVDDGRMHALEVRVNAKDEKGKNRKLQVSSRQGYYMSSTVPKEATRTQ*
Ga0070716_1004743861	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IGNLTARYSLGFALAEDEIDDGKMHSLEVRVKAKDEKGKNRKLLVSSRQGYYMSSVAPKDSAAKAQ*
Ga0079222_113397792	3300006755	Agricultural Soil	LSRIIGNLTARYSLGFALAEDENDDGRMHALQVRVNVKDEKGKPRKLQVSSRQGYYMSSTEAAKAQ*
Ga0079222_125402762	3300006755	Agricultural Soil	YSAGLARIIGNLTARYSLGFTLAENEIDDGRLHNLEVRVKTDDKKGKKRKLEVSSRQGYYMSSATPAETAKREQ*
Ga0079220_109067751	3300006806	Agricultural Soil	DGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTTSALKDVRATAQ*
Ga0075421_1008361941	3300006845	Populus Rhizosphere	TGLSKIIGNLTARYSLGFALAEDEMDDGRMHALEVRVKAKDEKGKTRKLQVSSRQGYYMSSTVPKEAAAKAQ*
Ga0075433_104584761	3300006852	Populus Rhizosphere	LTARYSLGFALAEEENDDGRMHALEVRVSAKDEKGKTRKLQVSSRQGYYMSSTAPKDAAVKAQ*
Ga0075425_1006869512	3300006854	Populus Rhizosphere	DYGAGLAQIIGNLTARYSLGFALAEDEVDDGHMHALEVRVNAKDEKGKNRKLLISSRQGYYMSSVGPKDSAARAQ*
Ga0075434_1013247772	3300006871	Populus Rhizosphere	LAQIIGNLTARYSLGFALAEDEVDDGHMHALEVRVNAKDEKGRNRKLLISSRQGYYMSSVGPKDSAARAQ*
Ga0075434_1014829441	3300006871	Populus Rhizosphere	SRIIGNLTARYSLGFTLAENETDDGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTTAAQKDVRASAQ*
Ga0075424_1002933655	3300006904	Populus Rhizosphere	LGFALAENEVDDGRMHTLQVRVNAKDEKGKTRKLLVSSRQGYYMSSTIPKDAAARVQ*
Ga0075424_1024993161	3300006904	Populus Rhizosphere	FALAEDEVDDGRMHTLEVRVKASDQKGKTHKLQVSSRQGYYMSSTVPKEAAAKAQ*
Ga0079219_119937063	3300006954	Agricultural Soil	AENETDDGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTTTAAKDVRASAQ*
Ga0105251_105293371	3300009011	Switchgrass Rhizosphere	DGRLHHLEVRVKAPDDKGKKRKLLVSSRQGYYMTSAATKDVRASAQ*
Ga0105245_129977722	3300009098	Miscanthus Rhizosphere	RYSLGFALAENEVDDGRLHNLEVRVKAKDEKGKSRKLLVSSRQGYYMSTAMPKEAAARAQ
Ga0075418_129445502	3300009100	Populus Rhizosphere	AEGELDDGKMHTLEVRVKAKDEKGKNRKLLVSSRQGYYMSSVTPKDAAAKAQ*
Ga0105247_107967761	3300009101	Switchgrass Rhizosphere	NLTARYSLGFALAENEVDDGRMHTLQVRVNAKDEKGKTRKLLVSSRQGYYMSSTIPKDAAARVQ*
Ga0105243_109789252	3300009148	Miscanthus Rhizosphere	FALAEDEIDDGRMHSLEVRVKAQDEKGKTRKLQVSSRQGYYMSSTIPKDAAAKAQF*
Ga0105243_110580562	3300009148	Miscanthus Rhizosphere	FALAENELDDGRMHSLEVRVRTKDEKGKSRKLLVSSRQGYYMSSTLPKDAAAKAQ*
Ga0111538_125902832	3300009156	Populus Rhizosphere	GNLTARYSLGFALAENEVDDGRMHTLQVRVNAKDEKGKTRKLLVSSRQGYYMSSTIPKDAAARVQ*
Ga0075423_118730511	3300009162	Populus Rhizosphere	SKIIGNLTARYSLGFALAEDEVDDGRMHTLEVRVKAPDQKGKTRKLQVSSRQGYYMSSTVPKEAAAKAQ*
Ga0075423_120005102	3300009162	Populus Rhizosphere	KDYGAGLSRIIGNLTARYSLGFALAEGEVDDGRMHSLEVHVKASDERGKTRKLQVSSRQGYYMSSTMPKEAAKAQ*
Ga0105249_111140131	3300009553	Switchgrass Rhizosphere	GLSRIIGNLTARYSLGFALAESEVDDGRMHGLEVRVKAKDEKGKNRKLLVSSRQGYYMSSTVPKEAAAKAQ*
Ga0126311_101053151	3300010045	Serpentine Soil	VKDYGAGLSKIIGNLTARYSLGFALAENETDDGRMHGLEVRVKAKDEKGKSRKLQVSSRQGYYMSTTVPKEAAVRAQ*
Ga0126311_102601311	3300010045	Serpentine Soil	GLSRIIGNLTARYCLGFQLAESETDDSRMHNLEVRVKAKDDKGKNRKLQVSSRQGYYMASTVPKEAAVRAQ*
Ga0105239_108074161	3300010375	Corn Rhizosphere	KDYGAGLSRIIGNLTARYSLGFALAEDEVDDGNMHGLEVRVKAKDDKGKTRKLLVSSRQGYYMSSIGAKDTAAKAQ*
Ga0105239_135476372	3300010375	Corn Rhizosphere	YSLGFALAEDENDDGRMHSLEVRVNAKDEKGKTRKLQVSSRQGYYMSSTIPKDAASN*
Ga0134124_112669891	3300010397	Terrestrial Soil	SKIIGNLTARYSLGFALAEDEVDDGRMHSLEVRVKAPDQKGKTRKLQVSSRQGYYMSSTVPKEAAAKAQ*
Ga0134127_102127031	3300010399	Terrestrial Soil	KDYSAGLSRIIGNLTARYSLGFALAESEIDDGRMHSLEVRVAAKDDKGKKRKLEVSSRQGYYMSSALPKEATSRAQ*
Ga0134127_105687663	3300010399	Terrestrial Soil	AGLSKIIGNLTARYSLGFALAEDEIDDGRMHSLEVRVKAQDEKGKNRRLQVSSRQGYYMSSTLPKDTAAKAQY*
Ga0134122_116311052	3300010400	Terrestrial Soil	IGNLTARYSLGFALAEDENDDGRVHALEIRVNVKDEKGKSRKLQVSSRQGYYMSSTEAAVKAQ*
Ga0134121_113554931	3300010401	Terrestrial Soil	DYGTGLSKIIGNLTARYSLGFQLAENEVDDGRMHSLEVRVKALDEKGKSRKLLVSSRQGYYMSTAAPREAAKAQ*
Ga0134123_100268141	3300010403	Terrestrial Soil	NLTARYSLGFALAESEVDDGRMHGLEVRVKAKDEKGKNRKLLVSSRQGYYMSSTVPKEAAAKAQ*
Ga0134123_125615772	3300010403	Terrestrial Soil	LTARYSLGFQLAENEVDDGRMHSLEVRVKALDEKGKSRKLLVSSRQGYYMSTAAPREAAKAQ*
Ga0134123_136204131	3300010403	Terrestrial Soil	GFTLAEGETDDGRLHNLEVRVKAPDAKGKLRKLEVSSRKGYYMSETGGKENTAAAVAPAAAATP*
Ga0105246_100961465	3300011119	Miscanthus Rhizosphere	LSKIIGNLTARYSLGFALAEDEVDDGRMHSLEVRVKAQDLKGKTRKLQVSSRQGYYMSSTVPKEAAAKAQ*
Ga0136623_104742852	3300012045	Polar Desert Sand	EEKDDGRLHNLEIRVKAPDAKGKLRKLEVNSRRGYYMTTATEKETTASKAP*
Ga0150985_1200252771	3300012212	Avena Fatua Rhizosphere	LTARYSLGFALAENEVDDGNMHALEVRVKAKDEKGKTRQLMVTSRQGYYMSSFAPKDSAAKAQ*
Ga0137407_118653011	3300012930	Vadose Zone Soil	KIIGNLTACYNLGFAMAEQENDGGRLPALEVRVRALDEKGKTRKLVVSSRQGYYMSTTGPKESTALKAQ*
Ga0126375_118874652	3300012948	Tropical Forest Soil	TARYSLGFTLAESETDDGRLHNLEVRVKAKDEKGKQRKLLVSSRQGYYMSSAMPKEAAAKAQ*
Ga0157373_105046751	3300013100	Corn Rhizosphere	LAENETDDGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTTAEPKDVRASAQ*
Ga0157374_113906992	3300013296	Miscanthus Rhizosphere	TARYSLGFTLAENETDDGRLHHLEVRVKAPDEKGKKRKLQISSRQGYYMAGAGTKDVRASAQ*
Ga0157378_124560932	3300013297	Miscanthus Rhizosphere	GLSRIIGNLTARYSLGFALAEDEIDDGRMHSLEVRVKAQDEKGKTRKLQVSSRQGYYMSSTIPKDVATKAQF*
Ga0157378_131966421	3300013297	Miscanthus Rhizosphere	GNLTARYSLGFALAEDEIDDGRMHNLEVRVKASDEKGKTRKLQVSSRQGYYMSSTIPKDAAVKAQF*
Ga0157375_127797272	3300013308	Miscanthus Rhizosphere	RYSLGFALAEDEVDDGRMHSLEVRVKAQDQKGKTRKLQVSSRQGYYMSSTIPKEAAAKAQ
Ga0163163_123737291	3300014325	Switchgrass Rhizosphere	YSLGFTLAKNETDDGRLHHLEVRVKAPDEKGKKRKLLVSSRQGYYMTSAATKDVRASAQ*
Ga0157376_103061842	3300014969	Miscanthus Rhizosphere	LAEIIGNLTARYSLGFALAENEIDDGRMHALEVRVNAKDEKGRNRKVLISSRQGYYMSSLAPKDATSASAKP*
Ga0132258_103254831	3300015371	Arabidopsis Rhizosphere	GNLTARYSLGFELAEAEVDDGRMHTLEVRVKAKDEKGKNRKLQVSSRQGYYMSSTMPKDAAAKAQ*
Ga0132257_1046446922	3300015373	Arabidopsis Rhizosphere	GLQQIIGNLTARYSLGFALAENEVDDGRMHNLQVRVKAKDEKGKARKLLVNSRQGYYMSSTIPKDAAAKAQF*
Ga0190272_100390991	3300018429	Soil	YSLGFALAEDEKDDGRLHNLEVRVKAKDAKGKTRKLEVSARKGYYMSETRAKERKETTATREW
Ga0173482_102614511	3300019361	Soil	IIGNLTARYSLGFALAENEVDDGNMHGLEVRVKAKDDKGKTRKLLVSSRQGYYMSSIGPKDTAAKAQ
Ga0182009_104000773	3300021445	Soil	LAENETDDGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTTSAPKDARVTAQ
Ga0207710_106782642	3300025900	Switchgrass Rhizosphere	DYGAGLSKIIGNLTARYSLGFALAENETDDGRMHALEVRVKAKDDKGKSRKLQVSSRQGYYMSTTAPKEAALRAQ
Ga0207680_111375491	3300025903	Switchgrass Rhizosphere	YATGLSRIIGNLTARYSLGFTLEENETDDGKMHALEVRVKAKDEKGKTRKLLVSSRQGYYMSSTDPKDTNARAQ
Ga0207654_101342531	3300025911	Corn Rhizosphere	FALAENEVDDGRMHTLQVRVNAKDEKGKTRKLLVSSRQGYYMSSTIPKDAAARVQ
Ga0207693_105157321	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GLARIIGNLTARYSLGFALAEDEIDDGKMHSLEVRVKAKDEKGKNRKLLVSSRQGYYMSSVAAKDTAAKAQ
Ga0207650_108671503	3300025925	Switchgrass Rhizosphere	TARYSLGFALAESEVDDGRMHGLEVRVKAKDEKGKNRKLLVSSRQGYYMSSTVPKEAAAKAQ
Ga0207687_113698352	3300025927	Miscanthus Rhizosphere	NLTARYSLGFALAEDEIDDGRMHALEVRVKAQDEKGKTRKLQVSSRQGYYMSSTLPKDVATKAQ
Ga0207709_106770651	3300025935	Miscanthus Rhizosphere	LGFALAEDEVDDGRMHTLEVRVKAPDQKGKTRKLQVSSRQGYYMSSTVPKEAAAKAQ
Ga0207670_115184031	3300025936	Switchgrass Rhizosphere	TARYSLGFALAEDEIDDGRMHSLEVRVKAQDEKGKTRKLQVSSRQGYYMSSTIPKDAAAKAQF
Ga0207670_116846492	3300025936	Switchgrass Rhizosphere	DYSAGLSRVIGNLTARYSLGFALAEDETDDGRLHSLEVRVQAKDEKGKKRKLLVSSRQGYYMSSAIPRDATTRAQ
Ga0207669_116638451	3300025937	Miscanthus Rhizosphere	SLGFALAENEVDDGRMHSLQVRVKAKDEKGRNRKLLVTSRQGYYMSTLGPKDAAAKAQ
Ga0207665_105043411	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TGLARIIGNLTARYSLGFALAEDEIDDGKMHSLEVRVKAKDEKGKNRKLLVSSRQGYYMSSVAPKDSAAKAQ
Ga0207689_110382683	3300025942	Miscanthus Rhizosphere	LDENETDDGQMHGLEVRVKAKDEKGKSRKLLVSSRQGYYMSTAGPKDVNARAQ
Ga0207679_115945831	3300025945	Corn Rhizosphere	ARYSLGFALAEDEVDDGRMHTLEVRVKASDQKGKTRKLQVSSRQGYYMSSTVPKEAAANE
Ga0207640_103018951	3300025981	Corn Rhizosphere	DYGAGLARIIGNLTARYSLGFALTEDEVDDGKMHSLKVRVKAKDQKGKDRKLLVSSRQGYYMSTVSPKNTARAK
Ga0207640_111527521	3300025981	Corn Rhizosphere	LTARYSLGFALAESEVDDGRMHGLEVRVKAKDEKGKNRKLLVSSRQGYYMSSTVPKEAAAKAQ
Ga0207703_116951072	3300026035	Switchgrass Rhizosphere	SLGFALAEDEIDDGRMHSLEVRVKAQDEKGKTRKLQVSSRQGYYMSSTIPKDAAAKAQF
Ga0207708_115066692	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	TARYSLGFALSESETDDGRMHALQVRVKAKDEKGKNRKLLVSSRQGYYMSSAGPKDAATTNVR
Ga0207702_109296821	3300026078	Corn Rhizosphere	IGNLTARYSLGFALAEDEMDDGKMHSLQVRVKAKDEKGKTRKLLVSSRQGYYMSSVAPKDTAAKAQ
Ga0207648_108581502	3300026089	Miscanthus Rhizosphere	AGLSRIIGNLTARYSLGFALAESEVDDGRMHSLEVRVQAKDEKGKKRKLQVSSRQGYYMSSAMPKDAATRAQ
Ga0207676_108097811	3300026095	Switchgrass Rhizosphere	LAESEVDDGRMHGLEVRVKAKDEKGKNRKLLVSSRQGYYMSSTVPKEAAAKAQ
Ga0207674_104664741	3300026116	Corn Rhizosphere	DYSTGLSRIISNLSARYSLGFALAESEIDDGRMHSLEVRVQAKDEKGKKRKLLVSSRQGYYMSSAMPKEATTRTQ
Ga0207674_111561471	3300026116	Corn Rhizosphere	SLGFALAEDEVDDGRMHSLEVRVKAPDQKGKTRKLQVSSRQGYYMSSTVPKEAAANEQ
Ga0207675_1001664373	3300026118	Switchgrass Rhizosphere	KDYGVGLSQIIGNLTARYSLGFALAEDEIDDGRMHSLEVRVKAQDEKGKTRKLQVSSRQGYYMPKEAAAKAQF
Ga0209814_103592602	3300027873	Populus Rhizosphere	GFALAESEVDDGRMHTLEVRVKAKDEKGKTRKLQVSSRQGYYMSSTAAAAKTQ
Ga0268265_112445171	3300028380	Switchgrass Rhizosphere	ARIIGNLTARYSLGFALAENETDDGRLHSLEVKVQAKDEKGKKRKLLVSSRQGYYMSNAMPRDTSTRAQ
Ga0268265_120932791	3300028380	Switchgrass Rhizosphere	LTARYSLGFALAESEIDDGRMHSLEVRVKAKDDKGKTRKLEVSSRQGYYMSSTVPKEAAAKAQ
Ga0268240_101779612	3300030496	Soil	ARYSLGFQLAESETDDGRMHNLEVRVKAKDDKGKNRKLQVSSRQGYYMSSTVPKEAAVRA
Ga0310813_123478372	3300031716	Soil	TARYSLGFTLAENETDDGRLHHLEVRVKAPDEKGKKRKLQVSSRQGYYMTTAAQKDVRASAQ
Ga0310892_113987122	3300031858	Soil	GAGLSKIIGNLTARYSLGFALAENEVDDGRMHTLQVRVNAKDEKGKTRKLLVSSRQGYYMSSTIPKDAAARVQ
Ga0307411_113558021	3300032005	Rhizosphere	GSGLSRIIGNLTARYSLGFQLAESETDDGRMHNLEVRVKAKDDKGKNRKLQVSSRQGYYMSSTVPKEAAAKAQ
Ga0315912_100487704	3300032157	Soil	RIIGNLTARYSLGFTLAENETDDGRLHSLEVRVKAEDKKGKKRKLEVSSRQGYYMSTATNPKETATRAQ
Ga0315912_107322401	3300032157	Soil	AGLSRIIGNLTARYSLGFTLAENETDDGRMHQLEVRVKAEDEKGKKRKLLVTSRQGYYLTETKPEATVRAQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066066

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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