NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F065889

Metagenome / Metatranscriptome Family F065889

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F065889
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 80 residues
Representative Sequence MTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS
Number of Associated Samples 86
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 10.24 %
% of genes near scaffold ends (potentially truncated) 40.94 %
% of genes from short scaffolds (< 2000 bps) 88.19 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (55.906 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(12.598 % of family members)
Environment Ontology (ENVO) Unclassified
(74.803 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(84.252 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 73.75%    β-sheet: 0.00%    Coil/Unstructured: 26.25%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF13619KTSC 7.87
PF03401TctC 6.30
PF02518HATPase_c 5.51
PF09926DUF2158 3.94
PF00106adh_short 3.15
PF00571CBS 1.57
PF08212Lipocalin_2 1.57
PF13185GAF_2 1.57
PF12244DUF3606 0.79
PF104171-cysPrx_C 0.79
PF03605DcuA_DcuB 0.79
PF06832BiPBP_C 0.79
PF04679DNA_ligase_A_C 0.79
PF07589PEP-CTERM 0.79
PF10503Esterase_PHB 0.79
PF13415Kelch_3 0.79
PF02350Epimerase_2 0.79
PF028262-Hacid_dh_C 0.79
PF09084NMT1 0.79
PF10115HlyU 0.79
PF05598DUF772 0.79
PF09362DUF1996 0.79
PF04392ABC_sub_bind 0.79
PF13561adh_short_C2 0.79
PF00072Response_reg 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 6.30
COG3040Bacterial lipocalin BlcCell wall/membrane/envelope biogenesis [M] 1.57
COG0381UDP-N-acetylglucosamine 2-epimeraseCell wall/membrane/envelope biogenesis [M] 0.79
COG0707UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferaseCell wall/membrane/envelope biogenesis [M] 0.79
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.79
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.79
COG2704Anaerobic C4-dicarboxylate transporterCarbohydrate transport and metabolism [G] 0.79
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.79
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.79
COG4953Membrane carboxypeptidase/penicillin-binding protein PbpCCell wall/membrane/envelope biogenesis [M] 0.79


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A55.91 %
All OrganismsrootAll Organisms44.09 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004157|Ga0062590_101698458Not Available643Open in IMG/M
3300004643|Ga0062591_102255766Not Available567Open in IMG/M
3300005293|Ga0065715_10242211Not Available1195Open in IMG/M
3300005327|Ga0070658_10081028All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2666Open in IMG/M
3300005327|Ga0070658_10269505Not Available1448Open in IMG/M
3300005328|Ga0070676_10616993All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales784Open in IMG/M
3300005328|Ga0070676_11316494Not Available552Open in IMG/M
3300005330|Ga0070690_101250912Not Available593Open in IMG/M
3300005333|Ga0070677_10597913Not Available610Open in IMG/M
3300005338|Ga0068868_100623802All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300005344|Ga0070661_101199296All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. A6635Open in IMG/M
3300005347|Ga0070668_101178381All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus taiwanensis694Open in IMG/M
3300005353|Ga0070669_100095830All Organisms → cellular organisms → Bacteria → Proteobacteria2232Open in IMG/M
3300005354|Ga0070675_100034954All Organisms → cellular organisms → Bacteria → Proteobacteria4081Open in IMG/M
3300005354|Ga0070675_101717309All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria579Open in IMG/M
3300005355|Ga0070671_100018658All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales5636Open in IMG/M
3300005355|Ga0070671_101456297Not Available605Open in IMG/M
3300005356|Ga0070674_100788449All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae819Open in IMG/M
3300005364|Ga0070673_101477854Not Available640Open in IMG/M
3300005365|Ga0070688_100892691Not Available700Open in IMG/M
3300005367|Ga0070667_100653972Not Available970Open in IMG/M
3300005367|Ga0070667_100736036All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales914Open in IMG/M
3300005441|Ga0070700_101471678Not Available578Open in IMG/M
3300005456|Ga0070678_100146279All Organisms → cellular organisms → Bacteria → Proteobacteria1897Open in IMG/M
3300005459|Ga0068867_100226925All Organisms → cellular organisms → Bacteria → Proteobacteria1508Open in IMG/M
3300005459|Ga0068867_101083253Not Available731Open in IMG/M
3300005526|Ga0073909_10481414Not Available598Open in IMG/M
3300005543|Ga0070672_100129564All Organisms → cellular organisms → Bacteria2072Open in IMG/M
3300005543|Ga0070672_100245806All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300005543|Ga0070672_101853042Not Available543Open in IMG/M
3300005543|Ga0070672_102048299Not Available516Open in IMG/M
3300005564|Ga0070664_100357410All Organisms → cellular organisms → Bacteria1330Open in IMG/M
3300005617|Ga0068859_101322654All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300005718|Ga0068866_10408405All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria878Open in IMG/M
3300005841|Ga0068863_100067765All Organisms → cellular organisms → Bacteria → Proteobacteria3376Open in IMG/M
3300006237|Ga0097621_100033575All Organisms → cellular organisms → Bacteria → Proteobacteria4088Open in IMG/M
3300006358|Ga0068871_102223737Not Available523Open in IMG/M
3300006575|Ga0074053_11877788Not Available662Open in IMG/M
3300006881|Ga0068865_101101005Not Available700Open in IMG/M
3300006881|Ga0068865_101676984Not Available573Open in IMG/M
3300009148|Ga0105243_11197827All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria772Open in IMG/M
3300009148|Ga0105243_12633939Not Available543Open in IMG/M
3300009176|Ga0105242_11933170All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae631Open in IMG/M
3300009177|Ga0105248_11628488All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria731Open in IMG/M
3300009177|Ga0105248_11959392Not Available665Open in IMG/M
3300009177|Ga0105248_12018741Not Available655Open in IMG/M
3300009551|Ga0105238_10844983Not Available932Open in IMG/M
3300009551|Ga0105238_12055343Not Available605Open in IMG/M
3300010403|Ga0134123_13363295Not Available516Open in IMG/M
3300011119|Ga0105246_12040995Not Available554Open in IMG/M
3300012958|Ga0164299_11104153Not Available593Open in IMG/M
3300012961|Ga0164302_10717345Not Available743Open in IMG/M
3300012961|Ga0164302_10865828All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300012987|Ga0164307_10953444Not Available694Open in IMG/M
3300012988|Ga0164306_10924517Not Available713Open in IMG/M
3300012989|Ga0164305_11917788Not Available538Open in IMG/M
3300013297|Ga0157378_11204255Not Available797Open in IMG/M
3300013297|Ga0157378_11435721All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria733Open in IMG/M
3300013306|Ga0163162_10244653Not Available1925Open in IMG/M
3300013306|Ga0163162_10450882All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1418Open in IMG/M
3300013307|Ga0157372_13269076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Romeriaceae → Romeria → Romeria gracilis → Romeria aff. gracilis LEGE 07310516Open in IMG/M
3300013308|Ga0157375_10133076All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Casimicrobiaceae → Casimicrobium → Casimicrobium huifangae2608Open in IMG/M
3300013308|Ga0157375_11109010Not Available926Open in IMG/M
3300013308|Ga0157375_11137629Not Available914Open in IMG/M
3300014326|Ga0157380_10521579All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1159Open in IMG/M
3300014968|Ga0157379_11568682Not Available642Open in IMG/M
3300014969|Ga0157376_10289020Not Available1547Open in IMG/M
3300014969|Ga0157376_12125981Not Available600Open in IMG/M
3300015201|Ga0173478_10073536All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1189Open in IMG/M
3300015371|Ga0132258_13609809Not Available1058Open in IMG/M
3300015372|Ga0132256_103683956Not Available515Open in IMG/M
3300015373|Ga0132257_103901320Not Available543Open in IMG/M
3300017792|Ga0163161_10103380Not Available2123Open in IMG/M
3300017792|Ga0163161_10327598All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1212Open in IMG/M
3300017792|Ga0163161_11102450All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria682Open in IMG/M
3300018073|Ga0184624_10312430Not Available704Open in IMG/M
3300018469|Ga0190270_10728752Not Available988Open in IMG/M
3300018469|Ga0190270_12261125All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium albertimagni604Open in IMG/M
3300018476|Ga0190274_10858494Not Available971Open in IMG/M
3300018476|Ga0190274_10970500Not Available922Open in IMG/M
3300018481|Ga0190271_10258390All Organisms → cellular organisms → Bacteria1779Open in IMG/M
3300021082|Ga0210380_10181243Not Available949Open in IMG/M
3300021082|Ga0210380_10450425Not Available590Open in IMG/M
3300025321|Ga0207656_10004504All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4873Open in IMG/M
3300025321|Ga0207656_10477247Not Available632Open in IMG/M
3300025903|Ga0207680_11053205All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria582Open in IMG/M
3300025920|Ga0207649_10778611All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300025920|Ga0207649_10870405Not Available705Open in IMG/M
3300025923|Ga0207681_10722775All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria829Open in IMG/M
3300025923|Ga0207681_11228588Not Available629Open in IMG/M
3300025923|Ga0207681_11504509All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300025926|Ga0207659_10384006All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1172Open in IMG/M
3300025930|Ga0207701_10173418All Organisms → cellular organisms → Bacteria → Proteobacteria1905Open in IMG/M
3300025930|Ga0207701_10260571All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1511Open in IMG/M
3300025931|Ga0207644_10251922All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1409Open in IMG/M
3300025931|Ga0207644_10700785Not Available844Open in IMG/M
3300025931|Ga0207644_10916305Not Available735Open in IMG/M
3300025934|Ga0207686_10691342Not Available810Open in IMG/M
3300025934|Ga0207686_10983350Not Available684Open in IMG/M
3300025935|Ga0207709_11658237Not Available531Open in IMG/M
3300025938|Ga0207704_10521456Not Available961Open in IMG/M
3300025938|Ga0207704_10549946Not Available938Open in IMG/M
3300025940|Ga0207691_10035379All Organisms → cellular organisms → Bacteria → Proteobacteria4636Open in IMG/M
3300025940|Ga0207691_10518721All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1011Open in IMG/M
3300025940|Ga0207691_11368960Not Available582Open in IMG/M
3300025941|Ga0207711_11574279All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria600Open in IMG/M
3300025945|Ga0207679_10536952All Organisms → cellular organisms → Bacteria → Proteobacteria1048Open in IMG/M
3300025960|Ga0207651_10027379All Organisms → cellular organisms → Bacteria → Proteobacteria3580Open in IMG/M
3300025961|Ga0207712_10753000Not Available853Open in IMG/M
3300025961|Ga0207712_11161945All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria688Open in IMG/M
3300025986|Ga0207658_10089603Not Available2382Open in IMG/M
3300026023|Ga0207677_10443617Not Available1111Open in IMG/M
3300026035|Ga0207703_10790847All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria905Open in IMG/M
3300026067|Ga0207678_10225278All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1605Open in IMG/M
3300026088|Ga0207641_10630850Not Available1051Open in IMG/M
3300026088|Ga0207641_11601588Not Available653Open in IMG/M
3300026089|Ga0207648_10142655All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2112Open in IMG/M
3300026089|Ga0207648_10173308Not Available1907Open in IMG/M
3300026089|Ga0207648_10715746All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300026095|Ga0207676_10625309All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.1037Open in IMG/M
3300026095|Ga0207676_12447843Not Available519Open in IMG/M
3300026121|Ga0207683_10663774Not Available966Open in IMG/M
3300028589|Ga0247818_10447512All Organisms → cellular organisms → Bacteria → Proteobacteria876Open in IMG/M
3300028889|Ga0247827_11042667Not Available558Open in IMG/M
3300031366|Ga0307506_10237120Not Available688Open in IMG/M
3300031547|Ga0310887_10744501Not Available612Open in IMG/M
3300033550|Ga0247829_10014321All Organisms → cellular organisms → Bacteria → Proteobacteria4800Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere12.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere11.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.24%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere9.45%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.30%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.51%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.51%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.51%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere4.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.15%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.94%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.57%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.57%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.57%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.57%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.79%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062590_10169845813300004157SoilMGSSRGYGAPKIEGMTQTAFDMTRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS*
Ga0062591_10225576623300004643SoilMTQTAFDMTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTQ*
Ga0065715_1024221133300005293Miscanthus RhizosphereMTQTAFAMTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0070658_1008102823300005327Corn RhizosphereMPEDAFDATTPLRSRWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL*
Ga0070658_1026950533300005327Corn RhizosphereMTESAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMELAQEWSLQDALRALSPELVAEDALRPLR*
Ga0070676_1061699313300005328Miscanthus RhizospherePADRPGPPRIAGMTESAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMELAQEWSLQDALRALSPELVAEDALRPLR*
Ga0070676_1131649413300005328Miscanthus RhizosphereMTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0070690_10125091213300005330Switchgrass RhizosphereMTESAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRARYVGR*
Ga0070677_1059791313300005333Miscanthus RhizosphereMAEDAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPEL
Ga0068868_10062380213300005338Miscanthus RhizospherePKIAGMPEDAFDATTPLRSRWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL*
Ga0070661_10119929623300005344Corn RhizosphereSRWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL*
Ga0070668_10117838123300005347Switchgrass RhizosphereMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS*
Ga0070669_10009583043300005353Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRAR*
Ga0070675_10003495443300005354Miscanthus RhizosphereMTQTAFAMTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTQ*
Ga0070675_10171730923300005354Miscanthus RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAED
Ga0070671_10001865883300005355Switchgrass RhizosphereMTQTAFDMTCPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDGFR*
Ga0070671_10145629713300005355Switchgrass RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0070674_10078844923300005356Miscanthus RhizosphereMTQTAFDMTSPLRSRWDQEGAEFVKSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS*
Ga0070673_10147785423300005364Switchgrass RhizosphereVPDPKSGGAPKIAGMAEDAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMDLAQEW
Ga0070688_10089269113300005365Switchgrass RhizosphereRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0070667_10065397223300005367Switchgrass RhizosphereMTQTAFDMTSPPRSRWDQVGAEFVQSNNEWCARACARLLALNSHLRAADTLQLVQEWSLKDGLRALSPELVAEDATRARSEIGVVDDGRARRR*
Ga0070667_10073603613300005367Switchgrass RhizosphereIAGMTESAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMELAQEWSLQDALRALSPELVAEDALRPLR*
Ga0070700_10147167813300005441Corn, Switchgrass And Miscanthus RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARAL*
Ga0070678_10014627933300005456Miscanthus RhizosphereMPEDAFNATTPLRSRWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL*
Ga0068867_10022692513300005459Miscanthus RhizosphereRSRWDQEGAEFVQSNNEWCARCCARLLALNSHLQAADTLELVQEWSLRDSLRALSPELVAEDATRARS*
Ga0068867_10108325333300005459Miscanthus RhizosphereMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLMQEWSLKDGLRALSPELVAEDATRARS*
Ga0073909_1048141413300005526Surface SoilMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0070672_10012956453300005543Miscanthus RhizosphereMGSSRGYGAPKIEGMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR*
Ga0070672_10024580623300005543Miscanthus RhizosphereMAEDAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMDLAQEWSLQDALRALSPELVAEDALRPLR*
Ga0070672_10185304213300005543Miscanthus RhizosphereKIDGMTQTAFDMTRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0070672_10204829913300005543Miscanthus RhizosphereMTEHAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQVKAEAAMQLAQEWSLQDALRALSPELVAEDALRPR*
Ga0070664_10035741023300005564Corn RhizosphereVDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL*
Ga0068859_10132265413300005617Switchgrass RhizosphereAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRARYVGR*
Ga0068866_1040840523300005718Miscanthus RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRASR*
Ga0068863_10006776513300005841Switchgrass RhizospherePLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDGFR*
Ga0097621_10003357573300006237Miscanthus RhizosphereMGSSRGYGAPKIEGMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDGFR*
Ga0068871_10222373713300006358Miscanthus RhizosphereMTQTAFDMTSPLPSRWDQEGAEFVQSNNEWCARCCARLLALNSQLQAADTLQVVQEWSLKDGLRALSPERVAEDAMRARS*
Ga0074053_1187778833300006575SoilMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDA
Ga0068865_10110100513300006881Miscanthus RhizosphereGMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR*
Ga0068865_10167698423300006881Miscanthus RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0105243_1119782723300009148Miscanthus RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDA
Ga0105243_1263393913300009148Miscanthus RhizosphereTQTAFDMTSPLCYRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS*
Ga0105242_1193317023300009176Miscanthus RhizosphereMTQTALDMTSPLRSRWDQEGAEFVQSNNEWCARGCARLLALNSQLEAADTLQLVQEWSLKDGPRSHSG*
Ga0105248_1162848813300009177Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALS
Ga0105248_1195939213300009177Switchgrass RhizospherePLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR*
Ga0105248_1201874113300009177Switchgrass RhizosphereMTQTAFDMTSPLRSRWDQVGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLEDGRRALSPELVAEDATRARS*
Ga0105238_1084498323300009551Corn RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLAINSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0105238_1205534313300009551Corn RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLMQEWSLKDGLRALSPELVAEDATRARSEIGVVDDGRARRR*
Ga0134123_1336329513300010403Terrestrial SoilLVDGNQGAYGQTAFDVTSPLRSVWDQVGAEFVQSNNEWSARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS*
Ga0105246_1204099523300011119Miscanthus RhizosphereMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0164299_1110415323300012958SoilVPDPKSGGAPKSAVREEDAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMDLAQEWSLQDALRALSPELVAEDALRPLR*
Ga0164302_1071734513300012961SoilMTQTAFDMTCPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR*
Ga0164302_1086582833300012961SoilSSRRYGPPKIDGMTQTAFAMTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0164307_1095344423300012987SoilMTQTAFDMTRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS*
Ga0164306_1092451713300012988SoilMTQTAFDMTRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0164305_1191778813300012989SoilMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDGFR*
Ga0157378_1120425513300013297Miscanthus RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR*
Ga0157378_1143572123300013297Miscanthus RhizosphereMTESAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRARS*
Ga0163162_1024465323300013306Switchgrass RhizosphereMEIDGMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS*
Ga0163162_1045088223300013306Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRARYVGR*
Ga0157372_1326907623300013307Corn RhizosphereMPEDAFDATTPLGSRWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVRDWSLKDGLRALSPELVAEDSVRPPHAGL*
Ga0157375_1013307633300013308Miscanthus RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALSPR*
Ga0157375_1110901033300013308Miscanthus RhizosphereMTQTAFDMTCPLRSRWDQEGAEFIQSNNEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSP
Ga0157375_1113762923300013308Miscanthus RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSP
Ga0157380_1052157913300014326Switchgrass RhizosphereTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0157379_1156868213300014968Switchgrass RhizosphereMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0157376_1028902023300014969Miscanthus RhizosphereMTSPLRSRWDQEGAEFVQSNSDWCARACARLLSLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0157376_1212598113300014969Miscanthus RhizosphereMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSHLRAADTLQLVQEWSLKDGLRALSPELVAEDATRARSEIGVVDD
Ga0173478_1007353613300015201SoilRRHDGLPKIDGMTQTAFDMTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0132258_1360980913300015371Arabidopsis RhizosphereMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARMLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL*
Ga0132256_10368395613300015372Arabidopsis RhizosphereVGAEFVQSNSEWCARACARLLALNSHLRAADTLQLVQEWSLKDGLRALSPELVAEDATRARSEIGVVD
Ga0132257_10390132023300015373Arabidopsis RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARSEIGVVDDRRARRR*
Ga0163161_1010338033300017792Switchgrass RhizosphereMGSSRGYGAPKIEGMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDGFR
Ga0163161_1032759813300017792Switchgrass RhizosphereLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0163161_1110245013300017792Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRAR
Ga0184624_1031243033300018073Groundwater SedimentFDMTSPFRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADALQLVQEWSLQDGLRALSPELVAEDAARTL
Ga0190270_1072875223300018469SoilMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPEMVAEDATRARS
Ga0190270_1226112513300018469SoilMTQTAFDVTRPLRSRWDQEGAEFVQLNNEWCARCCARLLALDPRLQAVTTLELVQEWSLLDGLRALSPELVAEDATRERFR
Ga0190274_1085849423300018476SoilMTQTAFDMTSPFRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0190274_1097050023300018476SoilMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRASS
Ga0190271_1025839023300018481SoilMLLRVIDVPSATPESFAMTQTAFDVTRPLQSRWDQAGAEFVQSNGEWCSRCCARLLALNPELQALTTLQLVQEWSLQDGLRALSPELVAEDATQKRFR
Ga0210380_1018124313300021082Groundwater SedimentMTQAAFDVTSPIRSRWDQEGTEFVRSNNEWCARCCARLLALNPGLQAVTTLELVQEWSLLDGLRALSPELVAENATRERFM
Ga0210380_1045042513300021082Groundwater SedimentMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLLLVQEWSLKDGLRALSPELVAEDATRARS
Ga0207656_1000450443300025321Corn RhizosphereMPEDAFDATTPLRSRWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL
Ga0207656_1047724723300025321Corn RhizosphereMAEDAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMDLAQEWSLQDALRALSPELVAEDALRPLR
Ga0207680_1105320513300025903Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQD
Ga0207649_1077861123300025920Corn RhizosphereMPEDAFDATTPLRSWWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL
Ga0207649_1087040513300025920Corn RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRAMSPELVAEDATRARS
Ga0207681_1072277513300025923Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELV
Ga0207681_1122858813300025923Switchgrass RhizosphereTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS
Ga0207681_1150450913300025923Switchgrass RhizosphereNAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRAR
Ga0207659_1038400613300025926Miscanthus RhizosphereMTQTAFAMTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTQ
Ga0207701_1017341813300025930Corn, Switchgrass And Miscanthus RhizosphereMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS
Ga0207701_1026057123300025930Corn, Switchgrass And Miscanthus RhizosphereSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTQ
Ga0207644_1025192243300025931Switchgrass RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0207644_1070078523300025931Switchgrass RhizosphereAGMTESAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMELAQEWSLQDALRALSPELVAEDALRPLR
Ga0207644_1091630513300025931Switchgrass RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADALQLVQEWSLKDGLRALSPELV
Ga0207686_1069134223300025934Miscanthus RhizosphereSRCATTHHSAGMCVNQLSDLTGPPKIDGVTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARGCARLLALNSQLEAADTLQLVQEWSLKDGPRSHSG
Ga0207686_1098335013300025934Miscanthus RhizosphereSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0207709_1165823723300025935Miscanthus RhizosphereGASDQRRSRRSLPKIAGMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRARYVGR
Ga0207704_1052145623300025938Miscanthus RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR
Ga0207704_1054994613300025938Miscanthus RhizosphereMTQTAFDMTRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0207691_1003537923300025940Miscanthus RhizosphereMGSSRGYGAPKIEGMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR
Ga0207691_1051872133300025940Miscanthus RhizospherePLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0207691_1136896013300025940Miscanthus RhizosphereMTEHAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQVKAEAAMQLAQEWSLQDALRALSPELVAEDALRARYVGR
Ga0207711_1157427913300025941Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPE
Ga0207679_1053695223300025945Corn RhizosphereMTESAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMELAQEWSLQDALRALSPELVAEDALRPLR
Ga0207651_1002737923300025960Switchgrass RhizosphereMTQTAFDMTCPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR
Ga0207712_1075300013300025961Switchgrass RhizosphereMTQTAFDMTSPLRSRWDQVGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS
Ga0207712_1116194523300025961Switchgrass RhizosphereMTESAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRAR
Ga0207658_1008960333300025986Switchgrass RhizosphereIAGMTESAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMELAQEWSLQDALRALSPELVAEDALRPLR
Ga0207677_1044361723300026023Miscanthus RhizosphereAEDAFDATSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMDLAQEWSLQDALRALSPELVAEDALRPLR
Ga0207703_1079084723300026035Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRASR
Ga0207678_1022527823300026067Corn RhizosphereRPLRSRWDQEGAEFIQSNNEWCARACARLLALNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0207641_1063085023300026088Switchgrass RhizosphereAGMPEDAFDATTPLRSRWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL
Ga0207641_1160158813300026088Switchgrass RhizosphereMTENAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPQLKAEAAMELAQEWSLQDALRALSPELVAEDALRARYVGR
Ga0207648_1014265533300026089Miscanthus RhizosphereMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR
Ga0207648_1017330813300026089Miscanthus RhizosphereMTQTALDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS
Ga0207648_1071574613300026089Miscanthus RhizosphereFDATTPLRSRWDQEGAEYVDSNAEWRERCWKRLLALNGQLGAAAALELVHDWSLKDGLRALSPELVAEDSVRPPHAGL
Ga0207676_1062530913300026095Switchgrass RhizospherePPKIDGMTQTAFDMTRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0207676_1244784313300026095Switchgrass RhizosphereEDAFDSTSPLRSRWDQQGAEFVQSNKEWCARCCARLLVLKPQLRAEAAMDLAQEWSLQDALRALSPELVAEDALRPLR
Ga0207683_1066377423300026121Miscanthus RhizosphereMTSPLRSRWDQEGAEFVQSNSDWCARACARLLTLNSQLQAADALQLVQEWSLKDGLRALSPELVAEDAARTL
Ga0247818_1044751223300028589SoilMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRKRS
Ga0247827_1104266723300028889SoilMTQTAFDMTSPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRA
Ga0307506_1023712033300031366SoilRPLRSRWDQEGAEFVQSNSEWCARACARLLALNSQLPAADTLLLVQEWSLEDSLRALSPELVAEDATRDRFR
Ga0310887_1074450123300031547SoilMTKNAGFDATSRLQSRWDQQGAEFVQSNKEWCARCCARLLTLKPELKAEAAMELAQEWSLQDALRALSPELVAEDALRAR
Ga0247829_1001432123300033550SoilMCVNQLSDLTGPPKIDGMTQTAFDMIRPLRSRWDQEGAEFVQSNNEWCARACARLLALNSQLQAADTLQLVQEWSLKDGLRALSPELVAEDATRARS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.