Metagenome / Metatranscriptome Family F065871

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065871
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	93 residues
Representative Sequence	MDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDQARRITNKVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR
Number of Associated Samples	68
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.60 %
% of genes near scaffold ends (potentially truncated)	59.06 %
% of genes from short scaffolds (< 2000 bps)	92.91 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.913 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere (15.748 % of family members)
Environment Ontology (ENVO)	Unclassified (32.283 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.30% β-sheet: 0.00% Coil/Unstructured: 37.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13411	MerR_1	16.54
PF00069	Pkinase	11.81
PF03960	ArsC	0.79
PF01258	zf-dskA_traR	0.79
PF13563	2_5_RNA_ligase2	0.79
PF02915	Rubrerythrin	0.79
PF02913	FAD-oxidase_C	0.79
PF15919	HicB_lk_antitox	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	47.24
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.79
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	0.79
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.25 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	79.53 %
Unclassified	root	N/A	7.09 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.36 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	51.97 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	25.98 %
Unclassified	root	N/A	7.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	51.97 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	25.98 %
Unclassified	root	N/A	7.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	51.18 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	25.98 %
Unclassified	root	N/A	7.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	51.18 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	25.98 %
Unclassified	root	N/A	7.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	25.98 %
Unclassified	root	N/A	7.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003840\|Ga0032355_1032779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	505	Open in IMG/M
3300004081\|Ga0063454_101374651	Not Available	596	Open in IMG/M
3300004081\|Ga0063454_102009793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	511	Open in IMG/M
3300004799\|Ga0058863_11538353	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300004800\|Ga0058861_11909778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	585	Open in IMG/M
3300004800\|Ga0058861_12004283	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	516	Open in IMG/M
3300005329\|Ga0070683_100000005	All Organisms → cellular organisms → Bacteria	361724	Open in IMG/M
3300005329\|Ga0070683_101707924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300005355\|Ga0070671_101543054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	588	Open in IMG/M
3300005367\|Ga0070667_101567705	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005458\|Ga0070681_10440238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1215	Open in IMG/M
3300005458\|Ga0070681_11452787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	610	Open in IMG/M
3300005531\|Ga0070738_10084955	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300005531\|Ga0070738_10088181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1705	Open in IMG/M
3300005539\|Ga0068853_101230553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	723	Open in IMG/M
3300005563\|Ga0068855_100498103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1324	Open in IMG/M
3300005587\|Ga0066654_10130224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1256	Open in IMG/M
3300005764\|Ga0066903_101665918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1213	Open in IMG/M
3300005764\|Ga0066903_105415715	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300005842\|Ga0068858_101719955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	619	Open in IMG/M
3300006237\|Ga0097621_101314565	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300006358\|Ga0068871_100518611	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300010048\|Ga0126373_12446674	Not Available	582	Open in IMG/M
3300010154\|Ga0127503_11017156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	511	Open in IMG/M
3300010376\|Ga0126381_100790508	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1362	Open in IMG/M
3300010376\|Ga0126381_104551497	Not Available	535	Open in IMG/M
3300010398\|Ga0126383_12158823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	644	Open in IMG/M
3300010398\|Ga0126383_12258540	Not Available	630	Open in IMG/M
3300011332\|Ga0126317_11069362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	601	Open in IMG/M
3300012212\|Ga0150985_100418824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	630	Open in IMG/M
3300012212\|Ga0150985_103654340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	842	Open in IMG/M
3300012212\|Ga0150985_103662693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	652	Open in IMG/M
3300012212\|Ga0150985_103830963	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012212\|Ga0150985_104339973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	990	Open in IMG/M
3300012212\|Ga0150985_106337958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	664	Open in IMG/M
3300012212\|Ga0150985_106805464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	966	Open in IMG/M
3300012212\|Ga0150985_107471021	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300012212\|Ga0150985_110521335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1207	Open in IMG/M
3300012212\|Ga0150985_111431345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	916	Open in IMG/M
3300012212\|Ga0150985_113102204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	573	Open in IMG/M
3300012212\|Ga0150985_114616246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	537	Open in IMG/M
3300012212\|Ga0150985_116823194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	912	Open in IMG/M
3300012212\|Ga0150985_117258549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	500	Open in IMG/M
3300012212\|Ga0150985_117589613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	906	Open in IMG/M
3300012212\|Ga0150985_118520004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	663	Open in IMG/M
3300012212\|Ga0150985_121040189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	645	Open in IMG/M
3300012212\|Ga0150985_121544041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	720	Open in IMG/M
3300012212\|Ga0150985_121599596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	524	Open in IMG/M
3300012212\|Ga0150985_121599685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	504	Open in IMG/M
3300012469\|Ga0150984_100266836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	615	Open in IMG/M
3300012469\|Ga0150984_101597332	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	771	Open in IMG/M
3300012469\|Ga0150984_102418698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	742	Open in IMG/M
3300012469\|Ga0150984_103177992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	589	Open in IMG/M
3300012469\|Ga0150984_104083144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	550	Open in IMG/M
3300012469\|Ga0150984_105465503	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300012469\|Ga0150984_106543667	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	684	Open in IMG/M
3300012469\|Ga0150984_107174150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	868	Open in IMG/M
3300012469\|Ga0150984_112028135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	504	Open in IMG/M
3300012469\|Ga0150984_112243737	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	730	Open in IMG/M
3300012469\|Ga0150984_113316992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1066	Open in IMG/M
3300012469\|Ga0150984_113410290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	664	Open in IMG/M
3300012469\|Ga0150984_115432305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	583	Open in IMG/M
3300012469\|Ga0150984_117000891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	538	Open in IMG/M
3300012469\|Ga0150984_117028205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	793	Open in IMG/M
3300012469\|Ga0150984_117046913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	715	Open in IMG/M
3300012469\|Ga0150984_119012832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	525	Open in IMG/M
3300012469\|Ga0150984_121494527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	525	Open in IMG/M
3300012988\|Ga0164306_11418433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	591	Open in IMG/M
3300013104\|Ga0157370_10532724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1077	Open in IMG/M
3300013104\|Ga0157370_10993123	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300013105\|Ga0157369_10123276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2749	Open in IMG/M
3300013296\|Ga0157374_12516017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	542	Open in IMG/M
3300015371\|Ga0132258_11920616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1490	Open in IMG/M
3300016270\|Ga0182036_10953353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	705	Open in IMG/M
3300016294\|Ga0182041_10379118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1197	Open in IMG/M
3300016387\|Ga0182040_10729525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	812	Open in IMG/M
3300017955\|Ga0187817_10608142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	697	Open in IMG/M
3300017973\|Ga0187780_10127687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1758	Open in IMG/M
3300018433\|Ga0066667_11936155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	539	Open in IMG/M
3300018468\|Ga0066662_11287000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	748	Open in IMG/M
3300020069\|Ga0197907_10191293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	584	Open in IMG/M
3300020069\|Ga0197907_11120852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	600	Open in IMG/M
3300020070\|Ga0206356_10716050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	574	Open in IMG/M
3300020075\|Ga0206349_1164204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	561	Open in IMG/M
3300020075\|Ga0206349_1242380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	505	Open in IMG/M
3300020075\|Ga0206349_1575930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300020076\|Ga0206355_1049194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	506	Open in IMG/M
3300020080\|Ga0206350_11490214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	586	Open in IMG/M
3300020081\|Ga0206354_10413287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	527	Open in IMG/M
3300020081\|Ga0206354_11660822	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	625	Open in IMG/M
3300020610\|Ga0154015_1197218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	681	Open in IMG/M
3300021560\|Ga0126371_12599248	Not Available	613	Open in IMG/M
3300022467\|Ga0224712_10183859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	943	Open in IMG/M
3300022467\|Ga0224712_10413692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	644	Open in IMG/M
3300025921\|Ga0207652_10471955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300025944\|Ga0207661_10000031	All Organisms → cellular organisms → Bacteria → Acidobacteria	164429	Open in IMG/M
3300025949\|Ga0207667_10043348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4775	Open in IMG/M
3300026142\|Ga0207698_10353379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1389	Open in IMG/M
3300027706\|Ga0209581_1023093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	3097	Open in IMG/M
3300027773\|Ga0209810_1087857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1438	Open in IMG/M
3300027965\|Ga0209062_1090325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1314	Open in IMG/M
3300030730\|Ga0307482_1134082	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300030937\|Ga0138302_1712961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	575	Open in IMG/M
3300031093\|Ga0308197_10255377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	625	Open in IMG/M
3300031545\|Ga0318541_10356983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	816	Open in IMG/M
3300031546\|Ga0318538_10508136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	653	Open in IMG/M
3300031680\|Ga0318574_10479163	Not Available	729	Open in IMG/M
3300031723\|Ga0318493_10680414	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	576	Open in IMG/M
3300031777\|Ga0318543_10453171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	575	Open in IMG/M
3300031938\|Ga0308175_100402909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1430	Open in IMG/M
3300031938\|Ga0308175_100582140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1202	Open in IMG/M
3300031938\|Ga0308175_103174286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	510	Open in IMG/M
3300031939\|Ga0308174_10462481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1032	Open in IMG/M
3300031996\|Ga0308176_11527153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	711	Open in IMG/M
3300031996\|Ga0308176_11710920	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031996\|Ga0308176_12116132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	601	Open in IMG/M
3300032074\|Ga0308173_10541093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1048	Open in IMG/M
3300032074\|Ga0308173_12296780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	509	Open in IMG/M
3300032770\|Ga0335085_10000012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	745943	Open in IMG/M
3300032770\|Ga0335085_10020368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	9478	Open in IMG/M
3300032770\|Ga0335085_10611115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1225	Open in IMG/M
3300032893\|Ga0335069_10298758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1917	Open in IMG/M
3300032897\|Ga0335071_10608970	Not Available	1044	Open in IMG/M
3300033004\|Ga0335084_11446570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	681	Open in IMG/M
3300033004\|Ga0335084_12016568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.91%
Host-Associated	Host-Associated	44.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.54%
Plants	Host-Associated → Plants	41.73%
Aquatic	Environmental → Aquatic	2.36%
Human	Host-Associated → Human	2.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.68%
Freshwater	Environmental → Aquatic → Freshwater	2.36%
Digestive System	Host-Associated → Human → Digestive System	2.36%
Roots	Host-Associated → Plants → Roots	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	16.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.54%
Loam	Environmental → Terrestrial → Soil → Loam	8.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.94%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.36%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	16.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.36%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%

Habitat	Taxonomy	Distribution
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	15.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	14.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	11.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.09%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.15%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.36%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003840	Avena fatua rhizosphere microbial communities from Hopland, California, USA - H2_Bulk_Litter_50 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0032355_10327791	3300003840	Avena Fatua Rhizosphere	MDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDQARRITNQVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR*
Ga0063454_1013746511	3300004081	Soil	MASAANIESASNQAAKIWIGIAVGAAVGIGIALSRRKKTRWDSAREITQRVADRSGDFAEATRGIVERVRNIYDESRKVVEDASQ
Ga0063454_1020097931	3300004081	Soil	MDSEMNNGQEQGPNIGIWIGIAVGTAVGIGIALSRRKRSPWDQARRITNQVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR*
Ga0058863_115383532	3300004799	Host-Associated	MATAEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWESAREITHRVADHSSDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR*
Ga0058861_119097782	3300004800	Host-Associated	MASPENIESASNQAAKIWIGIAVGAAVGIGIALSRRKKTRWESAREITQRVADRSGDLAEATRGIVERVRNIYEESRKVVEDASQLWSHGRKLVSH*
Ga0058861_120042831	3300004800	Host-Associated	NLAIWIGVGIGAAVGIGIALSRRKRTPWDSARDISKRVASHSGDLADTTRDIVDRVRNIYDEGCKLVEEAGELWSHGRKLVAR*
Ga0070683_10000000513	3300005329	Corn Rhizosphere	MSPEMNNGQGRNMAIWIGVGIGAAVGIGIALSRRKRTPWDSARDISKRVASHSGDLADATRDIVDRVRNIYEEGCKLVDEAGELWSHGRKLVTR*
Ga0070683_1017079241	3300005329	Corn Rhizosphere	MATAEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWESAREITHRVADHSSDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRL
Ga0070671_1015430541	3300005355	Switchgrass Rhizosphere	MDSEMNNDQGPNIGLWIGIAVGAAVGIGIALSRRKKSPWDSARRITNRVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR*
Ga0070667_1015677052	3300005367	Switchgrass Rhizosphere	MHHYGGVAGARGPTLTLGVEATMESDFSSNGNGSNKGIWIGIAVGAAVGIGIALSRRKRTRWESARDMTRRMADRSGDLADTTRDIVDRVRTIYEETRKVVEEAGDLWAH
Ga0070681_104402381	3300005458	Corn Rhizosphere	MATAEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWESAREISHRGADHSSDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR*
Ga0070681_114527871	3300005458	Corn Rhizosphere	MSPEMNNGQGRNLAIWIGVGIGAAVGIGIALSRRKRTPWDSARDISKRVASHSGDLADTTRDIVDRVRNIYDEGCKLVEEAGELWSHGRKLVAR*
Ga0070738_100849552	3300005531	Surface Soil	MASTQQNARNINTGIWIGIAVGAAVGLGIAVARRSRPRTTWDQAREVTRRVANRSGDLADATRDIMERMKTIYEEGRKVVEDAGELWEHSRKLVGV*
Ga0070738_100881811	3300005531	Surface Soil	MANTDMQSGINTNTGIWIGIAVGAAIGIGIALSRRSRPKTPWDQARDVTKRVASRSGDLADAAQDIMARVKTIYDEGRKVVEEAGELWEHSRKLVGV*
Ga0068853_1012305531	3300005539	Corn Rhizosphere	AIWIGVGIGAAVGIGIALSRRKKTPWDSARDISKRVASHSGDLADTTRDIVDRVRNIYEEGCKLVEEAGELWSHGRKLVAR*
Ga0068855_1004981032	3300005563	Corn Rhizosphere	MSPEMNNGQGRNMAIWIGVGIGAAVGIGIALSRRKKTPWDSARDISKRVASHSGDLADTTRDIVDRVRNIYEEGCKLVEEAGELWSHGRKLVAR*
Ga0066654_101302242	3300005587	Soil	MDSEMNNGQGPNVGIWIGIAVGAAVGIGIALSRRKRTPWDSARGISKKLADHSGDFADATRDIMDRVKTIYDEGCKVVEEAGELWAHGRKLVNR*
Ga0066903_1016659182	3300005764	Tropical Forest Soil	MDSTDMRRSMNANKGIWIGIAVGAAVGLGIALSRRNRHPSPWDTARHMTRRVTSHSGDLADATRDIVDRVKTIYEHGRRVVEDAGELWEHSRKLVGV*
Ga0066903_1054157152	3300005764	Tropical Forest Soil	MQASHNGNRNLGIWIGIGVGAAVGVGIALSRRKKPNTWDQARAVTKRLSSHSGDLADSARDIFDRVKTIYEEGRKIVDDAAE
Ga0068858_1017199552	3300005842	Switchgrass Rhizosphere	MDSEMNNDQGPNIGIWIGIAVGAAIGIGIALSRRKKSPWDSARGITRKVADHSGDLADATSNIVERVKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0097621_1013145652	3300006237	Miscanthus Rhizosphere	MDSEMNNDQGPNIGLWIGIAVGAAVGIGIALSRRKKSPWDSARRITNRVADHSGDLADATSNIVDRVKKIYDEGCKVVEEASELWAHGRKLVNR*
Ga0068871_1005186112	3300006358	Miscanthus Rhizosphere	MDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDQARRITNKVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR*
Ga0126373_124466742	3300010048	Tropical Forest Soil	MDESHNGYGRNLGIWIGIGVGAAVGVGIALSRRRKPTTWDQARAVTKRMASHSGDLADATRDIVERIKVIYEEGRKVVEEAADLVHHG
Ga0127503_110171561	3300010154	Soil	ENFESASNQAAKIWIGIAVGAAVGIGIALSRRSRKKTRWESAKEITQRVADRSGDLAEVTRGIVERVRNIYDESRKVVEDASELWSHGRKLVTR*
Ga0126381_1007905083	3300010376	Tropical Forest Soil	MEVMHNGHGRNLGIWIGIGVGAAVGVGIALSRRRKPSTWEHARSVTKRMAHHSSDLTDVARDIVERVKNIYEEGRKVVDEAADLVHHSRKLVGV*
Ga0126381_1045514971	3300010376	Tropical Forest Soil	MDESHSGYGRNLGIWIGIGVGAAVGVGIALSRRRKPTTWDQARAVTKRMASHSGDLADATRDIVERIKVIYEEGRKVVEEAADLVHHGRKMVGV*
Ga0126383_121588232	3300010398	Tropical Forest Soil	MHMEMSANGDRNRAIWIGVAIGAAVGVGIALSRRKKEPWAAAREMTKRVANRSGDISEATRDIVDRIKTIYDESRKVVEDAGELWSHGRRLVGH*
Ga0126383_122585401	3300010398	Tropical Forest Soil	MDESHNGYGRNLGIWIGIGVGAAVGVGIALSRRRKPTTWDQARAVTKRMASHSGDLADATRDIVERVKVIYEEGRKVVEEAAELLHHGRKMVGV*
Ga0126317_110693621	3300011332	Soil	MGSEMNTNKILIGIAIGTAVGVGIALSRRSRHKRSRWDSARAVTQRITARSGDLADATRDIVERVKTIYDESRKVVEEAGDLWAHGRKLVTH*
Ga0150985_1004188241	3300012212	Avena Fatua Rhizosphere	MDSEMNSGGGPNMGIWIGVAIGAAVGIGIALSRRKRSPWDSARGITRKVADHSGDLADATSNIVERVKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150985_1036543401	3300012212	Avena Fatua Rhizosphere	KHMGMDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKKSPWDQARGISRKVADHSGDLADATSNIMERVKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150985_1036626931	3300012212	Avena Fatua Rhizosphere	MASPENLESASNQAAKIWIGIAVGTAVGIGIALSRRKKTRWESAKQITLRVADRSGDFAEVTRGIVERVRNIYEESRKVVEDANQLWSHGRKLVTR*
Ga0150985_1038309632	3300012212	Avena Fatua Rhizosphere	MGMDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDQARGISRKVADHSGDLADATSNIMERVKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150985_1043399731	3300012212	Avena Fatua Rhizosphere	TMASPENASRENFEAASNQAAKIWIGIAVGAAVGIGIALSRRKKTRWESAREITHRVADRSGDLAEATRGIVERVRNIYEESRKVVEDASQLWSHGRKLVSH*
Ga0150985_1063379581	3300012212	Avena Fatua Rhizosphere	GEEHMDSEMNNDQGPNMGIWIGVAIGAAVGIGIALSRRKRSPWDSARGITRKVADHSGDLADATNNIVERMKVIYNEGCKVVEEAGELWAHGRKLVSR*
Ga0150985_1068054642	3300012212	Avena Fatua Rhizosphere	MDSEMNQEGPNLGLWIGIAVGAAVGIGIALSRRKRSPWDQARKITDRITDHSGDLADATSNIMQRVRTIYDEGCKVVEEAGELWAHGRKLVNR*
Ga0150985_1074710211	3300012212	Avena Fatua Rhizosphere	MDSEMNQEGPNLGLWIGIAVGAAVGIGIALSRRKRSPWDQARRITDRITDHSGDLADATSNIMQRVKTIYDEGCKVVEEAGELWSHGRKLVNR*
Ga0150985_1105213351	3300012212	Avena Fatua Rhizosphere	MASPANFESASNQAAKIWIGIAVGAAVGIGIALSRRKKTRWESAKEITQRVADRSGDLAEVTRGIVERVRNIYDESRKVVEDASQLWSHGRKLVTR*
Ga0150985_1114313452	3300012212	Avena Fatua Rhizosphere	ASPENIEAASNQAAKIWIGIAVGTAVGIGIALSRRKRTRWDSAKEITHRVADRSGDLAEATRGIVERVRNIYEESRKVVEDATELWSHGRKLVMR*
Ga0150985_1131022041	3300012212	Avena Fatua Rhizosphere	MDSEMNNGQEQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDQARRITNQVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR*
Ga0150985_1146162461	3300012212	Avena Fatua Rhizosphere	LMDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDSARGITKKVADHSGDLADATTNIVERVKNIYNEGCKVVEEAGELWAHGRKIVNR*
Ga0150985_1168231941	3300012212	Avena Fatua Rhizosphere	GLMDSEMNQEGPNLGLWIGIAVGAAVGIGIALSRRKRSPWDQARKITNRITDHSGDFADATNNIVQRVKTIYDEGCKVVEEAGELWAHGRKLVNR*
Ga0150985_1172585491	3300012212	Avena Fatua Rhizosphere	RNIMGMDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKKSPWDQARGISRKVADHSGDLADATSNIMERVKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150985_1175896131	3300012212	Avena Fatua Rhizosphere	CAIDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDQARRITNQVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR*
Ga0150985_1185200042	3300012212	Avena Fatua Rhizosphere	YMAASANTLNGNTDTEVSSNQTAKILVGIAVGAAVGIGIALSRRKRTRWDAARTITNRVAEHSGDLADMTRELVGRVRNIYEESRKIVEDCNHLWSNGRKMVGY*
Ga0150985_1210401892	3300012212	Avena Fatua Rhizosphere	TDSTNGGNNAAMIWIGVAVGAAIGVGIAVSRSRKRDRWSTAREITSRVADRSGDLADAGKNILDRIRTIYEESRKVVDEASDLWSHGRDLVTR*
Ga0150985_1215440412	3300012212	Avena Fatua Rhizosphere	LMDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDQARRITNKVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR*
Ga0150985_1215995961	3300012212	Avena Fatua Rhizosphere	AVGAAVGIGIALSRRKKTRWESAKEITQRVADRSADLSEVTRGIVERVRNIYDESRKVVEDASQLWSHGRKLVTR*
Ga0150985_1215996851	3300012212	Avena Fatua Rhizosphere	EELMDSEMNNGEGPNIGIWIGIAVGAAVGIGIALSRRKKSPWDSARGITKKVADHSGDLADATNNIVERMKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150984_1002668361	3300012469	Avena Fatua Rhizosphere	LMDSEMNNDQGPNIGIWIGIAVGAAIGIGIALSRRKRSPWDSARGITKKVADHSGDLADATTNIVERVKNIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150984_1015973322	3300012469	Avena Fatua Rhizosphere	AVGTAVGIGIALSRRKRTRWDSAKEITHRVADRSGDLAEATRGIVERVRNIYEESRKVVEDATELWSHGRKLVMR*
Ga0150984_1024186982	3300012469	Avena Fatua Rhizosphere	LMDSEMNQEGPNLGLWIGIAVGAAVGIGIALSRRKRSPWDQARKITDRITDHSGDLADATSNIMQRVRTIYDEGCKVVEEAGELWAHGRKLVNR*
Ga0150984_1031779921	3300012469	Avena Fatua Rhizosphere	AMDTEMNQEGPNLGLWIGIAVGAAIGIGIALSRRKRSPWDEARKITSRISDHSGDLADATSNIVQRVRTIYDEGLKVVEEAGELWAHGRKLVNR*
Ga0150984_1040831441	3300012469	Avena Fatua Rhizosphere	KFMGMDTEMNDGQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDSARGITRKVADHSGDLADATNNILERVKLIYNEGCKVVEDAGELWAHGRKLVNR*
Ga0150984_1054655031	3300012469	Avena Fatua Rhizosphere	IMGMDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKKSPWDQARGISRKVASHSGDLADATNNIMERVKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150984_1065436671	3300012469	Avena Fatua Rhizosphere	SAMTDSTNGGNNAAMIWIGVAVGAAIGVGIAVSRSRKRDRWSTAREITSRVADRSGDLADAGKNILDRIRTIYEESRKVVDEASDLWSHGRDLVTR*
Ga0150984_1071741502	3300012469	Avena Fatua Rhizosphere	IAVGAAVGIGIALSRRKRSPWDQARRITNKVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWAHGRKLVNR*
Ga0150984_1120281351	3300012469	Avena Fatua Rhizosphere	HMDSEMNNDQGPNMGIWIGVAIGAAVGIGIALSRRKRSPWDSARGITRKVADHSGDLADATNNIVERMKVIYNEGCKVVEEAGELWAHGRKLVSR*
Ga0150984_1122437372	3300012469	Avena Fatua Rhizosphere	WIGVAIGAAVGIGIALSRRKRSPWDSARGITRKVADHSGDLADATSNIVERVKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150984_1133169922	3300012469	Avena Fatua Rhizosphere	LMDSEMNQEGPNLGLWIGIAVGAAVGIGIALSRRKRSPWDQARKITNRITDHSGDFADATNNIVQRVKTIYDEGCKVVEEAGELWAHGRKLVNR*
Ga0150984_1134102902	3300012469	Avena Fatua Rhizosphere	ELMDSEMNNGQGPNMGIWIGIAVGAAVGIGIALSRRKRSPWDSARGISKRMADHSGDLADATNNIVERVKTIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0150984_1154323051	3300012469	Avena Fatua Rhizosphere	RSLMDSENFGQGRNLAIWIGVAVGAAVGIGIALSRSKKRTPWDSARDITKRVASHSEDFADSGREIIDRVKTIYDEGLKLVEEAGELWSHGRRLVTR*
Ga0150984_1170008911	3300012469	Avena Fatua Rhizosphere	LMDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKKSPWDSARGISKRVADHSGDLADATNNIVERVKTIYNEGCKVVEEASELWAHGRKLVSR*
Ga0150984_1170282051	3300012469	Avena Fatua Rhizosphere	SMDMDTEMNNGQGPNIGIWIGIAVGAAVGIGIALSRRKKSPWDSARGLTRKVASHSGDLADATSNIMDRVKTIYDEGCKVVEEAGELWAHGRKLVSR*
Ga0150984_1170469131	3300012469	Avena Fatua Rhizosphere	MASPANLESASNQAAKIWIGIAVGAAVGIGIALSRHSRKKTRWESAKEITQQVADHSGDLAEVTRGIVERVRNIYDESRKVVEDASELWSHGRKLVTR*
Ga0150984_1190128321	3300012469	Avena Fatua Rhizosphere	LYMAASANTLNGNTDTEVSSNQTAKILVGIAVGAAVGIGIALSRRKRTRWDAARTITNRVAEHSGDLADMTRELVGRVRNIYEESRKIVEDCNHLWSNGRKMVGY*
Ga0150984_1214945271	3300012469	Avena Fatua Rhizosphere	LMDSEMNNGQGPNIALWIGIAAGAAVGIGIALSRRKRSPWDSARKVASNLTDHSGDLADATSNIMQRVRTIYDEGCKVVEEAGELWSHGRKLVTR*
Ga0164306_114184331	3300012988	Soil	MDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDSARGISKRVADHSGDLADATSNIVERVKNIYNEGCKVVEEA
Ga0157370_105327242	3300013104	Corn Rhizosphere	MESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWETARELTHRVADHSGDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR*
Ga0157370_109931231	3300013104	Corn Rhizosphere	MSPEMNESQNRNMAIWIGIGIGAAVGIGIALSRRKKSPWDSARSISKRVADHSGDLAESTRDIVDRVRKIYEEGVKVVEEAGELWEHGRKLVTR*
Ga0157369_101232764	3300013105	Corn Rhizosphere	MSPEMNDSQNRNLAIWIGIGIGAAVGIGIALSRRKKSPWDSARSISKRVADHSGDLAESTRDIVDRVRKIYEEGVKVVEEAGELWEHGRKLVTR*
Ga0157374_125160171	3300013296	Miscanthus Rhizosphere	IGIWIGIAVGAAIGIGIALSRRKKSPWDSARGITRKVADHSGDLADATSNIVERVKNIYNEGCKVVEEAGELWAHGRKLVNR*
Ga0132258_119206162	3300015371	Arabidopsis Rhizosphere	MRDSDVNNGHGPNIGLLIGIAVGAAVGIGIALSRRKRSPWDSARRITNRFTDSSGDLAEATNNIMQRVKTIYDEGCKVVEEAGELWSHGRKLVSR*
Ga0182036_109533532	3300016270	Soil	MDSTDMRRSMNANKGIWIGIAVGAAVGLGIALSRRNRHPSPWDTARHMTRRVTSRSGDLADATRDIVDRVKTIYEHGRKVVEDAGELW
Ga0182041_103791183	3300016294	Soil	MDSTDMRRSMNANKGIWIGIAVGAAVGLGIALSRRNRHPSPWDTARHMTRRVTSRSGDLADATRDIVGRVKTIYEHGRKVVEDAGELWEHSRKLVGV
Ga0182040_107295252	3300016387	Soil	MDSTDMRRSMNANKVIWIGIAVGAAVGLGIALSRRNRHPSPWDTARHMTRRVTSRSGDLADATRDIVDRVKTIYEHGRKVVEDAGELWEHSRKLVGV
Ga0187817_106081421	3300017955	Freshwater Sediment	MQVDMNGQLGNKGIWIGIAVGAALGIGIALSRRKKSRWDKARELTERVANKTGDLGDATRDIVERVKTIYAQSRRVVEDAGDL
Ga0187780_101276873	3300017973	Tropical Peatland	MATTHMHSGQGVNTGIWIGIAVGAAVGIGIALSRRRRPRTPWDQAREVTRRVADRSGDLADATRDIVERVKTICEQGRKVVEDAGELWEHSRKLVGV
Ga0066667_119361551	3300018433	Grasslands Soil	MDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKRSPWDQARRITNKVADHSGDLADATSNIVERVKKIYDEGCKVVEEAGELWSHGRKLVNR
Ga0066662_112870001	3300018468	Grasslands Soil	MDSEMDNGQGPNTAIWIGIAIGAAVGIGIALSRRKRTPWDTARGISKNLASHSGDLADATKDIMDRVRTIYEEGCKVVEEAGELWEHGRKLVSR
Ga0197907_101912931	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MASPEHIESTSNQAAKIWIGIAVGAAVGIGIALSRRKKTRWESAREITQRVADRSGDLAEATRGIVERVRNIYEESRKVVEDASQLWSHGRKLVSH
Ga0197907_111208522	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	LMSPEMNDSQNRNLAIWIGIGIGAAVGIGIALSRRKKSPWDSARSISKRVADHSGDLAESTRDIVDRVRKIYEEGVKVVEEAGELWEHGRKLVTR
Ga0206356_107160501	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VLMATAEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWESAREISHRVADHSSDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR
Ga0206349_11642042	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	LMSPEMNESHNRNMAIWIGIGIGAAVGIGIALSRRKKSPWDSARSISKRVADHSGDLAESTRDIVDRVRKIYEEGVKVVEEAGELWEHGRKLVTR
Ga0206349_12423801	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MEDIEMHNGQANVGIWIGVAVGAAVGIGIALSRRRRSRTTWEQARDVTRRVANRSGDLADATRDLVERVKAIYEEGRKVVEDAGDLWEQSRKMVHV
Ga0206349_15759301	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MATAEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWETARELTHRVADHSGDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR
Ga0206355_10491941	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	LMSPEMNESQNRNMAIWIGIGIGAAVGIGIALSRRKKSPWDSARSISKRVADHSGDLAESTRDIVDRVRKIYEEGVKVVEEAGELWEHGRKLVTR
Ga0206350_113882452	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	SMEDIEMHNGQANVGIWIGVAVGAAVGIGIALSRRRRSRTTWEQARDVTRRVANRSGDLADATRDLVERVKAIYEEGRKVVEDAGDLWEQSRKMVHV
Ga0206350_114902141	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MATAEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWESAREITHRVADHSSDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR
Ga0206354_104132871	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	AEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWETARELTHRVADHSGDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR
Ga0206354_116608221	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MAIWIGVGIGAAVGIGIALSRRKKTPWDSARDISKRVASHSGDLADTTRDIVDRVRNIYEEGCKLVEEAGELWSHGRKLVAR
Ga0154015_11972182	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MSPEMNNGQGRNMAIWIGVGIGAAVGIGIALSRRKKTPWDSARDISKRVASHSGDLADTTRDIVDRVRNIYEEGCKLVEEAGELWSHGRKLVAR
Ga0126371_125992481	3300021560	Tropical Forest Soil	MDESHNGYGRNLGIWIGIGVGAAVGVGIALSRRKKPTTWDQARAVTKRMASHSGDLADATRDIVERIKVIYEEGRKVVEEASDLVHHGRKMVGV
Ga0224712_101838591	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	SPEHIESTSNQAAKIWIGIAVGAAVGIGIALSRRKKTRWESAREITQRVADRSGDLAEATRGIVERVRNIYEESRKVVEDASQLWSHGRKLVSH
Ga0224712_104136921	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	TAEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWETARELTHRVADHSGDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR
Ga0207652_104719551	3300025921	Corn Rhizosphere	ATAEGMESAPNQAAKIWVGIALGAAVGIGIALSRRKKTRWESAREITHRVADHSSDLAEVTRGIVDRVRNIYEESRRVVEDASGLWSQGRRLVGR
Ga0207664_110469701	3300025929	Agricultural Soil	MANGGWENQSTKIWVGIAIGAAIGLGIALSRRRPANRWDAAREIGRRLSDRSEDLADATRDIVDRVRTIYEEGRKVVEDAGELWSH
Ga0207661_10000031129	3300025944	Corn Rhizosphere	MSPEMNNGQGRNMAIWIGVGIGAAVGIGIALSRRKRTPWDSARDISKRVASHSGDLADATRDIVDRVRNIYEEGCKLVDEAGELWSHGRKLVTR
Ga0207667_100433484	3300025949	Corn Rhizosphere	MSPEMNNGEGRNMAIWIGIGIGAAVGIGIALSRRKKSPWDSARDISRRVADHSGDLAESTRDIVDRVRKIYDEGCKVVEEAGELWSHGRKLVTR
Ga0207698_103533791	3300026142	Corn Rhizosphere	MSPEMNNGQGRNMAIWIGVGIGAAVGIGIALSRRKKTPWDSARDISKRVASHSGDLADTTRDIVDRVRNIYEEGCKLVEEAGE
Ga0209581_10230933	3300027706	Surface Soil	MASTQQNARNINTGIWIGIAVGAAVGLGIAVARRSRPRTTWDQAREVTRRVANRSGDLADATRDIMERMKTIYEEGRKVVEDAGELWEHSRKLVGV
Ga0209810_10878571	3300027773	Surface Soil	IMASTQQNARNINTGIWIGIAVGAAVGLGIAVARRSRPRTTWDQAREVTRRVANRSGDLADATRDIMERMKTIYEEGRKVVEDAGELWEHSRKLVGV
Ga0209062_10903252	3300027965	Surface Soil	MANTDMQSGINTNTGIWIGIAVGAAIGIGIALSRRSRPKTPWDQARDVTKRVASRSGDLADAAQDIMARVKTIYDEGRKVVEEAGELWEHSRKLVGV
Ga0307482_11340822	3300030730	Hardwood Forest Soil	GMMNGETNGYDSKAAKIWIGIAVGTVLGVGIALSRRKRTRWDSAKQLTRKVAARSDDIAEATRDIVGRVRTIYDESRKVVADAEHLWARGRKLAGI
Ga0138302_17129612	3300030937	Soil	MTTSNGWEGNNKIWIGLAVGTAVGVGLALSRRKRTRWDAARDVTKRITNRSADLADTTRDIMDRVKTIYLESRKVVEEAGELWTHGRKLAGY
Ga0308197_102553771	3300031093	Soil	MASPANIESASNQAAKIWIGIAVGAALGIGIALSRRKKTRWESAREITQRVADRSGDLAEVTRGIVERVRNIYEESRKVVDDASQLWSHGRKLVAR
Ga0318541_103569832	3300031545	Soil	MDSTDMRRSMNANKGIWIGIAVGAAVGLGIALSRRNRHPSPWDTARHMTRRVTSRSGDLADATRDIVDRVKTIYEHGRKVVED
Ga0318538_105081362	3300031546	Soil	MDSTDMRRSMNANKGIWIGIAVGAAVGLGIALSRRNRHPSPWDTARHMTRRVTSRSGDLADATRDIVDRVKTIYEHGRRVVED
Ga0318574_104791632	3300031680	Soil	MDSTDMRRSMNANKGIWIGIAVGAAVGLGIALSRRNRHPSPWDTARHMTRRVTSRSGDLADATRDIVDRVKTIYEHGRRVVEDAGELWEHSRKLVGV
Ga0318493_106804141	3300031723	Soil	MDSSDMRRSMNANRGIWIGIAVGAAVGIGIALSRRNRSRTPWEHARDMTRRVSHHSGDFADATREIVDRVKSIYDQGRRVVEDAGELWEHSRKLVGV
Ga0318543_104531711	3300031777	Soil	IWIGIAVGAAVGLGIALSRRNRHPSPWDTARHMTRRVTSRSGDLADATRDIVDRVKTIYEHGRKVVEDAGELWEHSRKLVGV
Ga0308175_1004029091	3300031938	Soil	MDSEMNNDQGPNIGIWIGIAVGAAVGIGIALSRRKKSPWDSARGITKKVADHSGDFADATSNIVERVKNIYNEGCKELWAHGRKIVNR
Ga0308175_1005821401	3300031938	Soil	GPALRLVFGQRYSQVGPLHCGREEVMDSEMNNGQGPNVGIWIGIAVGAAVGIGIALSRRKRSPWDSARGITKKVADHSGDLADATNNIMERMKVIYNEGCKVVEEAGELWAHGRKLVNR
Ga0308175_1031742861	3300031938	Soil	MDSEMDNGQGPNMGIWIGVAIGAAVGIGIALSRRKKSPWESARGITKKVADHSGDLADATNNILERVKLIYNEGCKVVEEAGELWSHGRKLVNR
Ga0308174_104624811	3300031939	Soil	MDSEMNNGEGPNIGIWIGIAVGAAVGIGIALSRRKKSPWDSARGITKKVADHSGDLADATNNIVERMKTIYNEGCKVVEEAGELWAHGRKLVNR
Ga0308176_115271531	3300031996	Soil	NIGIWIGIADGAAVGIGIALSRRKKSPWDSARGITKKVADHSGDFADATSNIVERVKNIYNEGCKVVEEAGELWAHGRKIVNR
Ga0308176_117109202	3300031996	Soil	WIGIGVGAAVGIGIALSRRKRSPWDSARDISKRVASHSGDLADSTRDIVDRVRKIYEEGVKVVEEAGELWAHGRKLVTR
Ga0308176_121161321	3300031996	Soil	MDSEMNNDQGPNIGIWIGIAVGAAIGIGIALSRRKRSPWDSARGITKKVADHSGDLADATTNIVERVKNIYNEGCKVVEEAGELWA
Ga0308173_105410932	3300032074	Soil	MDSEMNNGQGPNVGIWIGIAVGAAVGIGIALSRRKRSPWDSARGITKKVADHSGDLADATNNIMERMKVIYNEGCKVVEEAGELWAHGRKLVNR
Ga0308173_122967801	3300032074	Soil	MSPEMNNGQGRNMAIWIGIGVGAAVGIGIALSRRKRSPWDSARDISKRVASHSGDLADSTRDIVDRVRKIYEEGVKVVEEAGELWAHGRKLVTR
Ga0335085_10000012474	3300032770	Soil	MDVETMMNGNASKIWIGIAVGAAVGIGIALSRKKKTRWDAAREVTRRVADKTPDFAEATREIMDHVRNIYEEGCKVADEAMELWSHGRRLVAH
Ga0335085_100203681	3300032770	Soil	MHNGQGNTGIWIGVAVGAAVGIGIALSRRKRTRTPWDQARDVTRRVASRSGDLADATRDLMERVKVIYEEGRKVVEDAGELWDQSRKLVGV
Ga0335085_106111151	3300032770	Soil	MDREEMRRNMNANKGIWIGIAVGAAVGIGIALSRRNRSRTPWDHARDLTKRVSNRSGDLADATRDIMDRVKNIYEQGRRVVEDAGELWEHSRKLVGV
Ga0335069_102987582	3300032893	Soil	MATTHTHSGQGVNMGIWIGIAVGAAVGIGIALSRRRRPRTPWDQAREVTRRVADRSGDLADATRDIVERVKTICEQGRKVVEDAGELWEHSRKLVGV
Ga0335071_106089702	3300032897	Soil	MDSAEMRRNMNANKGIWIGIAVGAAVGIGIALSRRNRSRTPWDHARDLTKRVSNRSGDLADATRDIMDRVKNIYEQGRRVVEDAGELWEHSRKLVGV
Ga0335084_114465701	3300033004	Soil	MDSESRMNGQFSNKGIWIGIAVGAAVGIGIALSRRSRKTRWDRAYDSAREVTRRVADRSGDLAEITQEIVDRVKTIYEETRKVVEDAGELWSHGRKMVGY
Ga0335084_120165681	3300033004	Soil	RPAITLWKGGTMDREEMRRNMNANKGIWIGIAVGAAVGIGIALSRRNRSRTPWDHARDLTKRVSNRSGDLADATRDIMDRVKNIYEQGRRVVEDAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065871

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences