Metagenome / Metatranscriptome Family F065725

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F065725
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	114 residues
Representative Sequence	MSSNSPVGQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK
Number of Associated Samples	74
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.43 %
% of genes near scaffold ends (potentially truncated)	22.05 %
% of genes from short scaffolds (< 2000 bps)	77.17 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (80.315 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (24.409 % of family members)
Environment Ontology (ENVO)	Unclassified (49.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.31% β-sheet: 42.48% Coil/Unstructured: 52.21%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00462	Glutaredoxin	7.09
PF00145	DNA_methylase	5.51
PF03372	Exo_endo_phos	2.36
PF04343	DUF488	2.36
PF00805	Pentapeptide	1.57
PF10979	DUF2786	1.57
PF13599	Pentapeptide_4	1.57
PF12705	PDDEXK_1	1.57
PF13361	UvrD_C	1.57
PF13649	Methyltransf_25	0.79
PF12161	HsdM_N	0.79
PF03235	DUF262	0.79
PF00565	SNase	0.79
PF13365	Trypsin_2	0.79
PF12146	Hydrolase_4	0.79
PF10593	Z1	0.79
PF13532	2OG-FeII_Oxy_2	0.79
PF00929	RNase_T	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	5.51
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	2.36
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.57
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.31 %
Unclassified	root	N/A	19.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.31 %
Unclassified	root	N/A	19.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.31 %
Unclassified	root	N/A	19.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18.11 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	7.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7.87 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	4.72 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	7.09 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	7.09 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	4.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.94 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.79 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	7.09 %
Bacteroidetes bacterium 46-16	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	7.09 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	4.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.94 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	7.09 %
Bacteroidetes bacterium 46-16	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	7.09 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	4.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.94 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.79 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Nocardia takedensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	7.09 %
Bacteroidetes bacterium 46-16	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	7.09 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	4.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.94 %
Zhouia	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Zhouia	0.79 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Nocardia takedensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	7.09 %
Bacteroidetes bacterium 46-16	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	7.09 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	4.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.94 %
Zhouia amylolytica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Zhouia → Zhouia amylolytica	0.79 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005583\|Ga0049085_10069470	Not Available	1241	Open in IMG/M
3300005583\|Ga0049085_10173288	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300006030\|Ga0075470_10082724	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300006030\|Ga0075470_10101197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300006637\|Ga0075461_10260687	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Zhouia → Zhouia amylolytica	507	Open in IMG/M
3300006875\|Ga0075473_10159695	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	907	Open in IMG/M
3300006917\|Ga0075472_10270279	Not Available	838	Open in IMG/M
3300007363\|Ga0075458_10068686	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	1108	Open in IMG/M
3300007363\|Ga0075458_10111934	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300007363\|Ga0075458_10285640	Not Available	500	Open in IMG/M
3300007544\|Ga0102861_1161315	Not Available	610	Open in IMG/M
3300007617\|Ga0102897_1229236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	552	Open in IMG/M
3300007625\|Ga0102870_1194767	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300007639\|Ga0102865_1099177	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300007992\|Ga0105748_10094515	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300008052\|Ga0102893_1081080	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300008055\|Ga0108970_10864713	Not Available	3437	Open in IMG/M
3300008055\|Ga0108970_11144242	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300008055\|Ga0108970_11601443	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	705	Open in IMG/M
3300009051\|Ga0102864_1177722	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009056\|Ga0102860_1224167	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300010293\|Ga0116204_1007959	All Organisms → cellular organisms → Bacteria	4929	Open in IMG/M
3300010293\|Ga0116204_1070059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300010293\|Ga0116204_1109372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	951	Open in IMG/M
3300010354\|Ga0129333_10023483	All Organisms → cellular organisms → Bacteria	5852	Open in IMG/M
3300010354\|Ga0129333_11584152	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300010370\|Ga0129336_10053551	All Organisms → cellular organisms → Bacteria	2408	Open in IMG/M
3300010370\|Ga0129336_10384706	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	768	Open in IMG/M
3300012968\|Ga0129337_1023406	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012968\|Ga0129337_1221446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	717	Open in IMG/M
3300012970\|Ga0129338_1345488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	508	Open in IMG/M
3300013087\|Ga0163212_1036585	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
(restricted) 3300013122\|Ga0172374_1115604	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10055464	Not Available	3099	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10414481	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10033881	All Organisms → cellular organisms → Bacteria	4819	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10083532	Not Available	2499	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10188007	Not Available	1420	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10205845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1335	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10452830	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10657104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	622	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10034929	All Organisms → cellular organisms → Bacteria	5249	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10545287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	758	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10753323	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10994384	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	506	Open in IMG/M
3300014801\|Ga0119946_1004800	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300017788\|Ga0169931_10039536	All Organisms → cellular organisms → Bacteria	5334	Open in IMG/M
3300017788\|Ga0169931_10231359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1533	Open in IMG/M
3300017788\|Ga0169931_10577317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	770	Open in IMG/M
3300017788\|Ga0169931_10712537	Not Available	659	Open in IMG/M
3300020074\|Ga0194113_10310948	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300020109\|Ga0194112_10174757	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	1779	Open in IMG/M
3300020109\|Ga0194112_10220282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1514	Open in IMG/M
3300020172\|Ga0211729_11288553	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300020179\|Ga0194134_10050468	Not Available	2299	Open in IMG/M
3300020179\|Ga0194134_10207806	Not Available	835	Open in IMG/M
3300020179\|Ga0194134_10316100	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300020183\|Ga0194115_10163425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1143	Open in IMG/M
3300020183\|Ga0194115_10302481	Not Available	729	Open in IMG/M
3300020190\|Ga0194118_10513756	Not Available	571	Open in IMG/M
3300020193\|Ga0194131_10015273	All Organisms → cellular organisms → Bacteria	8349	Open in IMG/M
3300020196\|Ga0194124_10275175	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300020196\|Ga0194124_10371695	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300020200\|Ga0194121_10068072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2569	Open in IMG/M
3300020204\|Ga0194116_10028449	All Organisms → cellular organisms → Bacteria	4411	Open in IMG/M
3300020214\|Ga0194132_10034995	Not Available	4289	Open in IMG/M
3300020214\|Ga0194132_10056542	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300020220\|Ga0194119_10105606	Not Available	2211	Open in IMG/M
3300020220\|Ga0194119_10240153	Not Available	1251	Open in IMG/M
3300020578\|Ga0194129_10023198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5581	Open in IMG/M
3300020578\|Ga0194129_10061510	All Organisms → cellular organisms → Bacteria	2763	Open in IMG/M
3300020578\|Ga0194129_10169966	Not Available	1368	Open in IMG/M
3300020603\|Ga0194126_10299071	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300021091\|Ga0194133_10016260	All Organisms → cellular organisms → Bacteria	7723	Open in IMG/M
3300021091\|Ga0194133_10041485	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	4087	Open in IMG/M
3300021376\|Ga0194130_10094895	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300021961\|Ga0222714_10006138	All Organisms → cellular organisms → Bacteria	11280	Open in IMG/M
3300021961\|Ga0222714_10126341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1570	Open in IMG/M
3300021961\|Ga0222714_10380074	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300021962\|Ga0222713_10037000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3855	Open in IMG/M
3300021962\|Ga0222713_10042130	All Organisms → cellular organisms → Bacteria	3561	Open in IMG/M
3300021962\|Ga0222713_10067587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2656	Open in IMG/M
3300021962\|Ga0222713_10096225	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300021962\|Ga0222713_10296305	Not Available	1032	Open in IMG/M
3300021962\|Ga0222713_10330647	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300021962\|Ga0222713_10531391	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300022752\|Ga0214917_10110127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1572	Open in IMG/M
3300023174\|Ga0214921_10511580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	567	Open in IMG/M
3300023179\|Ga0214923_10029025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4659	Open in IMG/M
3300023179\|Ga0214923_10039998	Not Available	3745	Open in IMG/M
3300023179\|Ga0214923_10130028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1621	Open in IMG/M
3300023179\|Ga0214923_10372077	Not Available	744	Open in IMG/M
3300023179\|Ga0214923_10480197	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300023179\|Ga0214923_10569027	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300024277\|Ga0255207_1056638	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300024348\|Ga0244776_10315460	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300024490\|Ga0255185_1019846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	956	Open in IMG/M
3300024491\|Ga0255203_1027215	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300024492\|Ga0255189_1022001	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300024492\|Ga0255189_1044245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	589	Open in IMG/M
3300024501\|Ga0255208_1017531	Not Available	1198	Open in IMG/M
3300024510\|Ga0255187_1011927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1238	Open in IMG/M
3300024532\|Ga0256352_1092858	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300024546\|Ga0256356_1068469	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300024851\|Ga0255293_1039860	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300025115\|Ga0209835_1034574	Not Available	1493	Open in IMG/M
3300025115\|Ga0209835_1130591	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300025585\|Ga0208546_1083075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	730	Open in IMG/M
3300025630\|Ga0208004_1046997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1180	Open in IMG/M
3300025635\|Ga0208147_1064907	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300025635\|Ga0208147_1145402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	554	Open in IMG/M
3300027079\|Ga0255188_1078791	Not Available	580	Open in IMG/M
3300027157\|Ga0255204_1041687	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300027160\|Ga0255198_1039534	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	858	Open in IMG/M
3300027160\|Ga0255198_1053830	Not Available	711	Open in IMG/M
3300027627\|Ga0208942_1176361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	561	Open in IMG/M
3300027697\|Ga0209033_1139078	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300027804\|Ga0209358_10052304	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 46-16	2410	Open in IMG/M
3300027804\|Ga0209358_10376927	Not Available	675	Open in IMG/M
3300028083\|Ga0255190_1034204	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300028269\|Ga0255193_1010408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1369	Open in IMG/M
3300028269\|Ga0255193_1058485	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300034023\|Ga0335021_0001832	All Organisms → cellular organisms → Bacteria	16529	Open in IMG/M
3300034023\|Ga0335021_0253227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia takedensis	961	Open in IMG/M
3300034096\|Ga0335025_0152913	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300034103\|Ga0335030_0124429	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300034116\|Ga0335068_0575131	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.64%
Host-Associated	Host-Associated	2.36%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.64%
Plants	Host-Associated → Plants	2.36%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	67.72%
Marine	Environmental → Aquatic → Marine	29.92%
Leaf	Host-Associated → Plants → Leaf	2.36%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	48.82%
Coastal	Environmental → Aquatic → Marine → Coastal	15.75%
River	Environmental → Aquatic → Freshwater → River	13.39%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.30%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.72%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	2.36%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	48.82%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.75%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	13.39%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.87%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.30%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	24.41%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	19.68%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	13.39%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	11.81%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	7.87%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.30%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.15%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	3.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.36%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.36%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	2.36%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.79%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	0.79%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300010293	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013087	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L	Environmental	Open in IMG/M
3300013122 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3m	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300014801	Aquatic microbial communities from drinking water treatment system in Nanjing, China - Filtered water - FW	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020190	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300020196	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300020204	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surface	Environmental	Open in IMG/M
3300020214	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80m	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021376	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surface	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300024277	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8d	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024490	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepB_0h	Environmental	Open in IMG/M
3300024491	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8h	Environmental	Open in IMG/M
3300024492	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_8h	Environmental	Open in IMG/M
3300024501	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepB_8d	Environmental	Open in IMG/M
3300024510	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_8h	Environmental	Open in IMG/M
3300024532	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024546	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024851	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025115	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG (SPAdes)	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027079	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepB_8h	Environmental	Open in IMG/M
3300027157	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8h	Environmental	Open in IMG/M
3300027160	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Law_RepC_8h	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300028083	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8h	Environmental	Open in IMG/M
3300028269	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepA_8h	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0049085_100694702	3300005583	Freshwater Lentic	MSSNSPVSQPSPLQIHWTDLLLGHPELVAQFIIEISADKWECRCGNTHESEGFDSCDEFGEVVPAELGPWDGALYVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK*
Ga0049085_101732882	3300005583	Freshwater Lentic	MSSNSPVSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTLDSEGFDACDEFGEVVPAELGPWDGRLYVCTRCWRVIDGNSLEILRLTEVEVIEKNLEYHWSYLSD*
Ga0075470_100827241	3300006030	Aqueous	MSPNSPSSQPGPIQMHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSE*
Ga0075470_101011972	3300006030	Aqueous	VEANGNYSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL*
Ga0075461_102606871	3300006637	Aqueous	MSLNSPSSQPGPIQMHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSD
Ga0075473_101596951	3300006875	Aqueous	VAANGNSSIDQNALPQIHWTDYLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL*
Ga0075472_102702791	3300006917	Aqueous	MTINGDSSVGQNALPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEDAVIEKNLEYRWSCLSD
Ga0075458_100686861	3300007363	Aqueous	MGSSFFTQNPIKTRKRRPKVAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL*
Ga0075458_101119341	3300007363	Aqueous	HWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSE*
Ga0075458_102856401	3300007363	Aqueous	KVAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEDAVIEKNLEYRWSYLSD*
Ga0102861_11613151	3300007544	Estuarine	MSSNSPDSQSDPIQIHWTDLLLAHPEYVPQFIIEISEDEWECRCGNSYESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEVEVIEKNLEYRWSYLSD*
Ga0102897_12292361	3300007617	Estuarine	MSSNSPVSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHDFEGFDPCDEFGEVVPAELGPWDGILYVCTRCWRVIDGNTLEILRLTEVEVIEKNLEYRWSYLSN*
Ga0102870_11947671	3300007625	Estuarine	MSSNSPVSQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHDFEGFDPCDEFGEVVPVELGPWDGCLHVCTRCWRVIDGNTLEILRLTEVEVIERNLEYRWSYLSNN*
Ga0102865_10991771	3300007639	Estuarine	MSSNSPVSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHDFEGFDPCDEFGEVVPAELGPWDGFLHVCTRCWRVIDGNTLEILRLTEVEVIERNLEYRWSYLSN*
Ga0105748_100945152	3300007992	Estuary Water	MSLNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHDFEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEVEVVEKNLEYRWSFLSE*
Ga0102893_10810801	3300008052	Estuarine	MGSSFFTQKPSKTKKRSPKMAVNGNSSIGQSALPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHDSDGFEPCDEIGEEVPADLGPWDGALYVCTRCWRVINGNTLEILRHAKAAIIESNMEYCWPKL*
Ga0108970_108647133	3300008055	Estuary	MGSISPVGKPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNSHESEGFDPCDEFGEVVPAELGPWDGILYVCTRCWRVIDGNTLEILRVTEMEVIDKNLEYRWSYLSK*
Ga0108970_111442421	3300008055	Estuary	MSSNSPVSQPGPIQIHWTDLLLGHPELVAQFIIEISADKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEVEVVEKNLEYRWSYLNE*
Ga0108970_116014431	3300008055	Estuary	MGSSFFTQKPLKTAQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPEFVSQYIIEISEDKWECRCGNTHDSDGFEPCDEFGKEVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNMEYRWPNL*
Ga0102864_11777222	3300009051	Estuarine	MSSNSPVSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHDFEGFDPCDEFGEVVPAELGPWDGFLHVCTRCWRVIDGNTLEILRLTEVEVIERNLEYRWSYLSD*
Ga0102860_12241672	3300009056	Estuarine	MSLNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDEWECRCGNTHESEGFDSCDEFGEVVPAELGPWDGILYVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSD*
Ga0116204_10079594	3300010293	Anoxic Lake Water	MGSSFFTQKSSKTTQKEPKMQVNENSQVGRNDLPQIHWTDFLLAHPEFVSQFIIETSEDKWECRCGNTNESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNLEYRWPNL*
Ga0116204_10700592	3300010293	Anoxic Lake Water	MSSNLPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGIFYVCTRCWRVIDGNTLEIFRVTEVEVIEKNLEYR*
Ga0116204_11093722	3300010293	Anoxic Lake Water	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNNHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEAEVIEKNLEYRWSYLSR*
Ga0129333_100234839	3300010354	Freshwater To Marine Saline Gradient	MSSNSPVSQSGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSD*
Ga0129333_115841521	3300010354	Freshwater To Marine Saline Gradient	LMSSNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGAVVPAELGPWDGCLHVCTRCWRVINGNTLEILRLTEIEVIEKNLEYRWSYLSE*
Ga0129336_100535514	3300010370	Freshwater To Marine Saline Gradient	MSSNSLSSQPGPIQFHWTDLLLAHPEYVPQFIVEKSEDNWECRCGNTHEAEGFDSCDEFGEVVPAELGPWDGILYVCTRCWRVIDGNTLEILRVTEVEVIDKNLEYRWSYLSD*
Ga0129336_103847061	3300010370	Freshwater To Marine Saline Gradient	MGTSFFTQKPSKTTQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPEFVSQYILEISEDKWECRCGNTHESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVDEVVIEKNMEYRWPNLQ*
Ga0129337_10234062	3300012968	Aqueous	SGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSD*
Ga0129337_12214461	3300012968	Aqueous	MGSSFFTQKPIKTRKRRPKVAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINGNTLEILRDVEEAVIEKNMEYRWPSL*
Ga0129338_13454881	3300012970	Aqueous	VAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL*
Ga0163212_10365852	3300013087	Freshwater	MGSSFFTQKPSKTTQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPEFVSQFIIETSEDKWECRCGNTNESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNLEYCWPNL*
(restricted) Ga0172374_11156042	3300013122	Freshwater	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRFTEVEVIEKNLEYRWSYLSR*
(restricted) Ga0172367_100554643	3300013126	Freshwater	MGSSFFTQKPSKTTQKEPKMQVNENSQVGRNDLPQLHWTDFLLAHPEFVSQFIIETSEDKWECRCGNTNESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNLEYRWPNL*
(restricted) Ga0172367_104144812	3300013126	Freshwater	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEAEVIEKNLEYRWSYLSR*
(restricted) Ga0172373_100338811	3300013131	Freshwater	PIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEAEVIEKNLEYRWSYLSR*
(restricted) Ga0172373_100835321	3300013131	Freshwater	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNSHESEGFDPCDELGEVVPSELGPWDGILYVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSK*
(restricted) Ga0172373_101880071	3300013131	Freshwater	MGSSFFTQKPSKTTQKEPKMQVNENSQVGRNDLPQIHWTDFLLAHPEFVSQFIIETSEDKWECRCGNTNESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNLEYRWPNL*
(restricted) Ga0172373_102058452	3300013131	Freshwater	MGSSFFTQKPSKTTQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPELVSQYILEISEDKWECRCGNTHESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVDDAVIEKNMEYRWPNL*
(restricted) Ga0172373_104528302	3300013131	Freshwater	MGSNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILKFTEVEVIEKNLEYRWSYLSK*
(restricted) Ga0172373_106571042	3300013131	Freshwater	MSSNSPVGQPDPIQIHWTDPLLAHPEYVPQFIIEISEDKWECRCSNNHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVT
(restricted) Ga0172372_100349291	3300013132	Freshwater	NSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEAEVIEKNLEYRWSYLSR*
(restricted) Ga0172372_105452871	3300013132	Freshwater	TDLLLAHPEYVPQFIIEISEDKWECRCDNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK*
(restricted) Ga0172372_107533232	3300013132	Freshwater	MSSNSPVGQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGLWDGILQVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK*
(restricted) Ga0172372_109943841	3300013132	Freshwater	MSSNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTYESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILR
Ga0119946_10048003	3300014801	Aquatic	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIVEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEVEVIDKNLEYRWSYLSE*
Ga0169931_100395361	3300017788	Freshwater	LLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEAEVIEKNLEYRWSYLSR
Ga0169931_102313592	3300017788	Freshwater	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGLWDGILQVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK
Ga0169931_105773171	3300017788	Freshwater	PDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCDNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK
Ga0169931_107125372	3300017788	Freshwater	MSSNSPVGQPDPIQIHWTDPLLAHPEYVPQFIIEISEDKWECRCGNNHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK
Ga0194113_103109482	3300020074	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILSFTEVEVIEKNLEYRWSYLSK
Ga0194112_101747572	3300020109	Freshwater Lake	MGSFFFTQKPPKTIQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPELVSQYILEISEDKWECRCGNTHESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNMEYRWPNP
Ga0194112_102202823	3300020109	Freshwater Lake	MGSSFFTQKPSKTTQKEPKMQVNENSQVGRNDLPQIHWTDFLLAHPEFVSQFIIETSEDKWECRCGNTNESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDVVIEKNLEYCWPNL
Ga0211729_112885531	3300020172	Freshwater	MSSNSPVSQPDPIQIHWTDLLLGHPELVAQFIIEISEDKWECRCGNTHESDGFDSCDEFGEVVPAELGPWDGILYVCTRCWRVIDGNTLEILRLTEVEVIEKNLEYRWSYLNE
Ga0194134_100504682	3300020179	Freshwater Lake	MSSNSPVGQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK
Ga0194134_102078061	3300020179	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNSHESEGFDPCDELGEVVPSELGPWDGILYVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSK
Ga0194134_103161002	3300020179	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRFTEVEVIEKNLEYRWSYLSK
Ga0194115_101634252	3300020183	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRLTEVEVIEKNIEYCWSYLSDH
Ga0194115_103024811	3300020183	Freshwater Lake	VGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNNHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRLTEVEVIEKNLEYRWSYLSK
Ga0194118_105137562	3300020190	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNNHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRLTEVEVIEKNLEYRWSYLSK
Ga0194131_100152737	3300020193	Freshwater Lake	MSSYSAAGQSESPQFDWTDLLLADLGLVPQYILETSEGFWECRCGNTHSSEGFAPCDELGEIVPAELGPWDGVLNVCIRCWRIINGNTLEVLRRTRTEVIEKNLDTC
Ga0194124_102751752	3300020196	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGSLQVCTRCWRVIDGNTLEILRFTEVEVIEKNLEYRWSYLSK
Ga0194124_103716951	3300020196	Freshwater Lake	MSSNSPVGQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRVTEVE
Ga0194121_100680722	3300020200	Freshwater Lake	MSSPSAAGQPESLQLDWTDLLLAGSGLVPQYILETSEDFWECRCGNTHSSEGFAPCDELGEIVPAELGPWDGVLNVCVRCWRIVNGNTLEVLRRTRAEVIEKNLDAC
Ga0194116_100284493	3300020204	Freshwater Lake	MGSSFFTQKPSKTTQKEPKMQVNENSQVGRNDLPQIHWTDFLLAHPEFVSQFIIETSEDKWECRCGNTNESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNLEYRWPNL
Ga0194132_100349956	3300020214	Freshwater Lake	LAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK
Ga0194132_100565424	3300020214	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVAPAELGPWDGILQVCTRCWRVIDGNTLEILRFTEVEVIEKNLEYRWSYLSK
Ga0194119_101056063	3300020220	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNNHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVINGNTLEILRLTEMEVIEKNLEYRWSYLSK
Ga0194119_102401531	3300020220	Freshwater Lake	SPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSK
Ga0194129_100231984	3300020578	Freshwater Lake	MGSSFFTQKPSKTTQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPEFVSQYILEISEDKWECRCGNTHESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVDDAVIEKNMEYRWPNL
Ga0194129_100615102	3300020578	Freshwater Lake	MGSFFFTQKPPKTIQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPELVSQYILEISEDKWECRCGNTHESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNMEYRWPNL
Ga0194129_101699662	3300020578	Freshwater Lake	LLAHPEYVPQFIIEISEDKWECRCGNNHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVINGNTLEILRLTEMEVIEKNLEYRWSYLSK
Ga0194126_102990711	3300020603	Freshwater Lake	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRFTEVEVIEK
Ga0194133_100162607	3300021091	Freshwater Lake	MGSSFFTQKPPKTIQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPELVSQYILEISEDKWECRCGNTHESDGFEPCDEVGREVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNMEYRWPNP
Ga0194133_100414852	3300021091	Freshwater Lake	MSSNSPAGQPDPIQIHWTDLLLAHPEYVPQFIVEISEDKWECRCGNTNESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRFTEVEVIEKNLEYRWSYLSK
Ga0194130_100948951	3300021376	Freshwater Lake	QIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVIDGNTLEILRLTEVEVIEKNIEYCWSYLSDH
Ga0222714_100061388	3300021961	Estuarine Water	VEANGNYSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0222714_101263411	3300021961	Estuarine Water	VAVNGNSSIDQNASPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTRCWRVINCNTLEILRDVEEAVIEKNLEYRWPKL
Ga0222714_103800742	3300021961	Estuarine Water	NSPVSQSGLIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSD
Ga0222713_100370006	3300021962	Estuarine Water	IQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSD
Ga0222713_100421301	3300021962	Estuarine Water	VAANGNSSIDQNALPQIHWTDYLLDHHDLVAQYILEIAEDNWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0222713_100675873	3300021962	Estuarine Water	VEANGNYSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINGNTLEILRDVEDAVIEKNLEYRWPKL
Ga0222713_100962252	3300021962	Estuarine Water	VAVNGNSSIDQNASPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0222713_102963051	3300021962	Estuarine Water	MSSNSPVSQSGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSD
Ga0222713_103306472	3300021962	Estuarine Water	MSSNSPVSQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRVTEVKVVEKNLEYRWSYLSE
Ga0222713_105313911	3300021962	Estuarine Water	MSSNSPVSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNSLEILRLTEMEVIEKNLEYRWSYLSD
Ga0214917_101101273	3300022752	Freshwater	MAANGNSSIDQNDLPQIHWTDYLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINGNTLEILRDVEDAVIEKNLEYRWPKL
Ga0214921_105115801	3300023174	Freshwater	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILHVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWS
Ga0214923_100290255	3300023179	Freshwater	MGSSFFTQKPLKTAQKEPKMQVNENSQVGRNDLPQIHWTDLLLAHPEFVSQYIIEISEDKWECRCGNTHDSDGFEPCDEFGKEVPAELGPWDGALYVCTRCWRVINGNTLEILREVEDAVIEKNMEYRWPNL
Ga0214923_100399982	3300023179	Freshwater	MGSISPVGKPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNSHESEGFDPCDEFGEVVPAELGPWDGILYVCTRCWRVIDGNTLEILRVTEMEVIDKNLEYRWSYLSK
Ga0214923_101300284	3300023179	Freshwater	MGSSFFTQKSIKTRKRRPKVEANGNYSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0214923_103720771	3300023179	Freshwater	VAVNGNSSIDQNASPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPDELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0214923_104801971	3300023179	Freshwater	MSSNSLSSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDSCDEFGEVVPAELGPWDGILYVCTRCWRVIDGNTLEILRVTEVEVIDKNLEYRWSYLSD
Ga0214923_105690271	3300023179	Freshwater	VEAYGNSSIDQNALPQIHWTDYLLDHHDLVAQYILEIAEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEDAVIERNLEYRWSYLSD
Ga0255207_10566381	3300024277	Freshwater	MSSNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIETSEDKWECRCGNTHESEGFDPCDEFGAVVPAELGPWDGCLHVCTRCWRVINGNTLEILRLTEIEVIEKNLEYRWSYLSDKKTQ
Ga0244776_103154601	3300024348	Estuarine	MSSNSPVSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHDFEGFDPCDEFGEVVPVELGPWDGCLHVCTRCWRVIDGNTLEILRLTEVEVIEKNLEYRWSYLSN
Ga0255185_10198461	3300024490	Freshwater	VAANGNSSIDQNALPQIHWTDYLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINGNTLEILRDVEEAVIEKNLEYRWPKL
Ga0255203_10272151	3300024491	Freshwater	VAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINGNTLEILRDVEEAVIEKNLEYRWPKL
Ga0255189_10220012	3300024492	Freshwater	MSPNSPSSQPGPIQMHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSEKLTE
Ga0255189_10442451	3300024492	Freshwater	VAANGNSSVDQNALPQIHWTDFLLDHHDLVAQYILEIAEDNWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0255208_10175312	3300024501	Freshwater	VEAYGNSSIDQNALPQIHWTDYLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEDAVIEKNLEYRWSYLSD
Ga0255187_10119272	3300024510	Freshwater	VAANGNSSIDQNALPQIHWTDYLLDHHDLVAQYILEIAEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0256352_10928582	3300024532	Freshwater	PGPIQIHWTDLLLAHPEYVPQFIIETSEDKWECRCGNTHESEGFDPCDEFGAVVPAELGPWDGCLHVCTRCWRVINGNTLEILRLTEIEVIEKNLEYRWSYLSDKKTQ
Ga0256356_10684691	3300024546	Freshwater	MSSNSPVSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEIIEKNLEYRWSYLSK
Ga0255293_10398602	3300024851	Freshwater	MSSNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSDKKTQ
Ga0209835_10345742	3300025115	Anoxic Lake Water	MSSNSPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGILQVCTRCWRVINGNTLEILRLTEMEVIEKNLEYRWSYLSK
Ga0209835_11305911	3300025115	Anoxic Lake Water	MSSNLPVGQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGIFYVCTRCWRVIDGNTLEIFRVTEVEVIEKNLEYR
Ga0208546_10830751	3300025585	Aqueous	MSPNSPSSQPGPIQMHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSE
Ga0208004_10469972	3300025630	Aqueous	VAVNGNSSIDQNASPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTRCWRVINCNTLEILRDVEEAVIEKNLKYRWPKL
Ga0208147_10649071	3300025635	Aqueous	VAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEDAVIEKNLEYRWSYLSD
Ga0208147_11454021	3300025635	Aqueous	MSPNSPSSQPGPIQMHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYL
Ga0255188_10787912	3300027079	Freshwater	VAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEDAVIERNLEYRWSYLSD
Ga0255204_10416872	3300027157	Freshwater	MSPNSPSSQPGPIQMHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNTLEILRLTEMEVIEKNLEYRWSYLSD
Ga0255198_10395341	3300027160	Freshwater	VAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEIAEDKWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0255198_10538302	3300027160	Freshwater	MSSNSPVGQPGPIQIHWTDLLLAHPEYVPQFIVEISEDKWECRCGNTNESEGFDPCNEFGEVVAAELGPWDGILQVCTRCWRVIDGNTLEILRVTELEIIEKNLEYRWSYLSK
Ga0208942_11763611	3300027627	Freshwater Lentic	MSSNSPVSQPSPLQIHWTDLLLGHPELVAQFIIEISADKWECRCGNTHESEGFDSCDEFGEVVPAELGPWDGALYVCTRCWRVIDGNTLEILRVTEVEVIEKNLEYRWSYLSNN
Ga0209033_11390781	3300027697	Freshwater Lake	VAANGNSSIDQNALPQIHWTDYLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEDAVIEKNLEYRWSYLSD
Ga0209358_100523043	3300027804	Freshwater Lake	VAANGNSSIDQNALPQIHWTDYLLDHHDLVAQYILEIAEDNWECRCGNTHDSDGFEPCDEFGAEVPAELGPWDGALYVCTRCWRVINGNTLEILRDVEEAVIEKNMEYRWPSL
Ga0209358_103769272	3300027804	Freshwater Lake	MTINGDSSVGQNALPQIHWTDFLLDHHDLVAQYILEISEDIWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEDAVIERNLEYRWSYLSD
Ga0255190_10342041	3300028083	Freshwater	MSSNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIETSEDKWECRCGNTHESEGFDPCDEFGAVVPAELGPWDGCLHVCTRCWRVINGNTLEILRLTEIEVIEKNLEYRWSYLSEK
Ga0255193_10104083	3300028269	Freshwater	MGSSFFTQNPIKTRKRRPKVAANGNSSIDQNALPQIHWTDFLLDHHDLVAQYILEISEDKWECRCGNTHELDGFEPCDEFGLEVPAELGPWDGALYVCTKCWRVINSNTLEILRDVEEAVIEKNLEYRWPKL
Ga0255193_10584852	3300028269	Freshwater	SNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIETSEDKWECRCGNTHESEGFDPCDEFGAVVPAELGPWDGCLHVCTRCWRVINGNTLEILRLTEIEVIEKNLEYRWSYLSDKKTQ
Ga0335021_0001832_6529_6870	3300034023	Freshwater	MSSNSPVSQSGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWDGCLHVCTRCWRVIDGNSLEILRLTEMEVIEKNLEYRWSYMSD
Ga0335021_0253227_307_648	3300034023	Freshwater	MSSNSPVSQPGPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHDSEGFDPCGEFGEVVPAELGPWNGILYVCTRCWRVIDGNTLEILRLTEVEVVEKNLEYRWSYLSD
Ga0335025_0152913_419_760	3300034096	Freshwater	MSSNSPSSQPGPIQIHWTDLLLAHPEYVPQFIIETSEDKWECRCGNTHESEGFDPCDEFGAVVPAELGPWDGCLHVCTRCWRVINGNTLEILRLTEMEVIEKNLEYSWSYLSK
Ga0335030_0124429_73_414	3300034103	Freshwater	MSSNSPVSQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWGGYLYVCTRCWRVIDGNTLEILRLTEIEVIEKNLEYRWSYLNE
Ga0335068_0575131_141_482	3300034116	Freshwater	MSSNSPVSQPDPIQIHWTDLLLAHPEYVPQFIIEISEDKWECRCGNTHESEGFDPCDEFGEVVPAELGPWGGYLYVCTRCWRVIDGNTLEILRLTEIEVIEKNLEYRWSYLSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters