Metagenome / Metatranscriptome Family F065714

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F065714
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	45 residues
Representative Sequence	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Number of Associated Samples	81
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.39 %
% of genes near scaffold ends (potentially truncated)	46.46 %
% of genes from short scaffolds (< 2000 bps)	65.35 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (50.394 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (29.921 % of family members)
Environment Ontology (ENVO)	Unclassified (55.906 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.803 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.14% β-sheet: 0.00% Coil/Unstructured: 69.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF03807	F420_oxidored	23.62
PF12089	DUF3566	15.75
PF00535	Glycos_transf_2	8.66
PF02348	CTP_transf_3	8.66
PF03989	DNA_gyraseA_C	4.72
PF00561	Abhydrolase_1	4.72
PF13450	NAD_binding_8	3.94
PF03435	Sacchrp_dh_NADP	3.94
PF05050	Methyltransf_21	3.94
PF02826	2-Hacid_dh_C	2.36
PF06210	DUF1003	1.57
PF13692	Glyco_trans_1_4	0.79
PF12697	Abhydrolase_6	0.79
PF02096	60KD_IMP	0.79
PF02698	DUF218	0.79
PF03448	MgtE_N	0.79
PF01118	Semialdhyde_dh	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	8.66
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	8.66
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	8.66
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	4.72
COG4420	Uncharacterized membrane protein	Function unknown [S]	1.57
COG0706	Membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.79
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.39 %
Unclassified	root	N/A	49.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.39 %
Unclassified	root	N/A	49.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.39 %
Unclassified	root	N/A	49.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.75 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	8.66 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	5.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.61 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	14.96 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	6.30 %
Actinobacteria bacterium IMCC26103	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	5.51 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.96 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	5.51 %
Actinobacteria bacterium IMCC26103	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	5.51 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.96 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	5.51 %
Actinobacteria bacterium IMCC26103	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	5.51 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.96 %
Actinobacteria bacterium IMCC26103	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	5.51 %
Ilumatobacter nonamiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	0.79 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001843\|RCM34_1020308	Not Available	582	Open in IMG/M
3300001844\|RCM35_1109775	Not Available	750	Open in IMG/M
3300002145\|S2t7BSb_11650956	Not Available	6546	Open in IMG/M
3300002733\|codie8draft_1046829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	4062	Open in IMG/M
3300005739\|Ga0076948_1000410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	109819	Open in IMG/M
3300005739\|Ga0076948_1004183	All Organisms → cellular organisms → Bacteria	12779	Open in IMG/M
3300005739\|Ga0076948_1007071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	8666	Open in IMG/M
3300005739\|Ga0076948_1008351	Not Available	1631	Open in IMG/M
3300005739\|Ga0076948_1018230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2200	Open in IMG/M
3300005739\|Ga0076948_1034552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3317	Open in IMG/M
3300005739\|Ga0076948_1036393	Not Available	1027	Open in IMG/M
3300005805\|Ga0079957_1009219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7571	Open in IMG/M
3300006030\|Ga0075470_10014586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2430	Open in IMG/M
3300006030\|Ga0075470_10181504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300006641\|Ga0075471_10005669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	7973	Open in IMG/M
3300006875\|Ga0075473_10024479	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300007094\|Ga0102532_1014920	Not Available	1626	Open in IMG/M
3300007212\|Ga0103958_1046239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2231	Open in IMG/M
3300007214\|Ga0103959_1000264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3289	Open in IMG/M
3300007363\|Ga0075458_10122688	Not Available	806	Open in IMG/M
3300008072\|Ga0110929_1046006	Not Available	549	Open in IMG/M
3300010293\|Ga0116204_1019926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	2760	Open in IMG/M
3300010293\|Ga0116204_1024347	Not Available	2434	Open in IMG/M
3300010293\|Ga0116204_1160585	Not Available	744	Open in IMG/M
3300010293\|Ga0116204_1224524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300010299\|Ga0129342_1043500	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300010299\|Ga0129342_1228981	Not Available	652	Open in IMG/M
3300010318\|Ga0136656_1291493	Not Available	531	Open in IMG/M
3300010354\|Ga0129333_10122773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	2391	Open in IMG/M
3300010354\|Ga0129333_10129335	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300010354\|Ga0129333_10180092	Not Available	1929	Open in IMG/M
3300010354\|Ga0129333_10509684	Not Available	1054	Open in IMG/M
3300010354\|Ga0129333_11217449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300010370\|Ga0129336_10080430	Not Available	1923	Open in IMG/M
3300010370\|Ga0129336_10248895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	999	Open in IMG/M
3300012006\|Ga0119955_1157089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300013087\|Ga0163212_1212325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300013087\|Ga0163212_1265700	Not Available	532	Open in IMG/M
3300013091\|Ga0163210_1241910	Not Available	635	Open in IMG/M
(restricted) 3300013122\|Ga0172374_1020726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	3038	Open in IMG/M
(restricted) 3300013122\|Ga0172374_1264599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10236280	Not Available	1216	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10475558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	765	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10051939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3945	Open in IMG/M
3300017788\|Ga0169931_10187298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	1788	Open in IMG/M
3300017788\|Ga0169931_10403830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300017788\|Ga0169931_10597093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300017788\|Ga0169931_10689929	Not Available	674	Open in IMG/M
3300017788\|Ga0169931_10791707	Not Available	610	Open in IMG/M
3300020074\|Ga0194113_10013965	All Organisms → cellular organisms → Bacteria	9284	Open in IMG/M
3300020074\|Ga0194113_10122783	Not Available	2216	Open in IMG/M
3300020074\|Ga0194113_10293614	Not Available	1237	Open in IMG/M
3300020083\|Ga0194111_10698853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300020084\|Ga0194110_10097528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2442	Open in IMG/M
3300020084\|Ga0194110_10318478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	1089	Open in IMG/M
3300020179\|Ga0194134_10014735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5619	Open in IMG/M
3300020179\|Ga0194134_10046549	Not Available	2436	Open in IMG/M
3300020179\|Ga0194134_10110195	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300020179\|Ga0194134_10293975	Not Available	644	Open in IMG/M
3300020183\|Ga0194115_10145126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	1244	Open in IMG/M
3300020190\|Ga0194118_10095521	Not Available	1834	Open in IMG/M
3300020193\|Ga0194131_10337742	Not Available	679	Open in IMG/M
3300020197\|Ga0194128_10297425	Not Available	807	Open in IMG/M
3300020200\|Ga0194121_10082635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	2180	Open in IMG/M
3300020200\|Ga0194121_10506780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300020204\|Ga0194116_10298069	Not Available	849	Open in IMG/M
3300020204\|Ga0194116_10569272	Not Available	516	Open in IMG/M
3300020214\|Ga0194132_10132038	Not Available	1521	Open in IMG/M
3300020214\|Ga0194132_10411427	Not Available	687	Open in IMG/M
3300020220\|Ga0194119_10077199	Not Available	2772	Open in IMG/M
3300020220\|Ga0194119_10536004	Not Available	731	Open in IMG/M
3300020222\|Ga0194125_10027780	Not Available	6305	Open in IMG/M
3300020222\|Ga0194125_10564430	Not Available	685	Open in IMG/M
3300020499\|Ga0208084_1000306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12069	Open in IMG/M
3300020557\|Ga0208231_1000697	All Organisms → cellular organisms → Bacteria	9052	Open in IMG/M
3300020578\|Ga0194129_10128714	Not Available	1666	Open in IMG/M
3300020578\|Ga0194129_10249100	Not Available	1036	Open in IMG/M
3300020603\|Ga0194126_10083512	Not Available	2690	Open in IMG/M
3300020603\|Ga0194126_10702848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300021092\|Ga0194122_10561733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300021093\|Ga0194123_10050555	All Organisms → cellular organisms → Bacteria	2727	Open in IMG/M
3300021093\|Ga0194123_10199333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	1025	Open in IMG/M
3300021093\|Ga0194123_10439108	Not Available	590	Open in IMG/M
3300021376\|Ga0194130_10070030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC26103	2394	Open in IMG/M
3300021376\|Ga0194130_10144752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1473	Open in IMG/M
3300021424\|Ga0194117_10184440	Not Available	1041	Open in IMG/M
3300021961\|Ga0222714_10020276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5217	Open in IMG/M
3300021961\|Ga0222714_10181237	Not Available	1232	Open in IMG/M
3300022752\|Ga0214917_10055023	All Organisms → cellular organisms → Bacteria	2646	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10000414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	55456	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10016790	All Organisms → cellular organisms → Bacteria	3769	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10025150	Not Available	2949	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10043369	Not Available	2116	Open in IMG/M
3300024277\|Ga0255207_1020468	Not Available	1071	Open in IMG/M
3300024350\|Ga0255167_1035446	Not Available	908	Open in IMG/M
3300024356\|Ga0255169_1009897	Not Available	1944	Open in IMG/M
3300024356\|Ga0255169_1058427	Not Available	652	Open in IMG/M
3300024491\|Ga0255203_1010283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300024498\|Ga0255199_1051969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300024502\|Ga0255181_1086380	Not Available	501	Open in IMG/M
3300024507\|Ga0255176_1013597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1671	Open in IMG/M
3300024512\|Ga0255186_1021707	Not Available	869	Open in IMG/M
3300024572\|Ga0255268_1174634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300025145\|Ga0209609_10180500	Not Available	696	Open in IMG/M
3300025279\|Ga0208047_1019537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1971	Open in IMG/M
3300025283\|Ga0208048_1019031	Not Available	2111	Open in IMG/M
3300025283\|Ga0208048_1126108	Not Available	519	Open in IMG/M
3300025585\|Ga0208546_1112606	Not Available	602	Open in IMG/M
3300025635\|Ga0208147_1004000	All Organisms → cellular organisms → Bacteria	4343	Open in IMG/M
3300025818\|Ga0208542_1142665	Not Available	657	Open in IMG/M
3300027306\|Ga0255220_1083427	Not Available	595	Open in IMG/M
3300027503\|Ga0255182_1011096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	2982	Open in IMG/M
3300027627\|Ga0208942_1091895	Not Available	872	Open in IMG/M
3300027656\|Ga0209357_1001425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9685	Open in IMG/M
3300028086\|Ga0255201_1059004	Not Available	585	Open in IMG/M
3300028089\|Ga0255299_1100773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300028258\|Ga0255214_1038255	Not Available	740	Open in IMG/M
3300028267\|Ga0256358_1053314	Not Available	797	Open in IMG/M
3300028269\|Ga0255193_1034630	Not Available	707	Open in IMG/M
3300029930\|Ga0119944_1019617	Not Available	928	Open in IMG/M
3300029930\|Ga0119944_1026628	Not Available	762	Open in IMG/M
3300033981\|Ga0334982_0046020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2429	Open in IMG/M
3300034018\|Ga0334985_0282297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300034073\|Ga0310130_0194268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300034120\|Ga0335056_0079427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2060	Open in IMG/M
3300034166\|Ga0335016_0515839	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300034682\|Ga0310128_030374	Not Available	1300	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.64%
Terrestrial	Environmental → Terrestrial	2.36%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	81.10%
Marine	Environmental → Aquatic → Marine	15.75%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.36%
Unclassified	Environmental → Aquatic → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	60.63%
Coastal	Environmental → Aquatic → Marine → Coastal	14.17%
River	Environmental → Aquatic → Freshwater → River	13.39%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.15%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.36%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.57%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	60.63%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.17%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	13.39%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	3.15%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	29.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	19.68%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	13.39%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	7.87%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.30%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	5.51%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	3.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.57%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	1.57%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	1.57%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.57%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	1.57%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.79%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.79%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.79%
Water Bodies	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Water Bodies	0.79%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	0.79%
Coal-Bed Methane Well	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Coal-Bed Methane Well	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001843	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM34, ROCA_DNA218_2.0um_bLM_C_2b	Environmental	Open in IMG/M
3300001844	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM35, ROCA_DNA220_0.2um_bLM_C_3a	Environmental	Open in IMG/M
3300002145	S2t7BSb (114f)	Environmental	Open in IMG/M
3300002733	Coal-bed methane well microbial communities from Surat Basin, Queensland, Australia, Sample - Codie-8 produced water	Environmental	Open in IMG/M
3300005739	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007094	Freshwater lake microbial communities from Singapore - a non-axenic Oscillatoriales culture (M13A)	Environmental	Open in IMG/M
3300007212	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projects	Environmental	Open in IMG/M
3300007214	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projects	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300008072	Microbial Communities in Water bodies, Singapore - Site MA	Environmental	Open in IMG/M
3300010293	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300013087	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L	Environmental	Open in IMG/M
3300013091	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220m	Environmental	Open in IMG/M
3300013122 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3m	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020190	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300020204	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surface	Environmental	Open in IMG/M
3300020214	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80m	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020222	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250m	Environmental	Open in IMG/M
3300020499	Freshwater microbial communities from Lake Mendota, WI - 14SEP2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020557	Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300021092	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10m	Environmental	Open in IMG/M
3300021093	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surface	Environmental	Open in IMG/M
3300021376	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surface	Environmental	Open in IMG/M
3300021424	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023208 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MG	Environmental	Open in IMG/M
3300024277	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8d	Environmental	Open in IMG/M
3300024350	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8d	Environmental	Open in IMG/M
3300024356	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8d	Environmental	Open in IMG/M
3300024491	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8h	Environmental	Open in IMG/M
3300024498	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepA_8h	Environmental	Open in IMG/M
3300024502	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8d	Environmental	Open in IMG/M
3300024507	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8d	Environmental	Open in IMG/M
3300024512	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_0h	Environmental	Open in IMG/M
3300024572	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025145	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaG (SPAdes)	Environmental	Open in IMG/M
3300025279	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220m (SPAdes)	Environmental	Open in IMG/M
3300025283	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L (SPAdes)	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027306	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8d	Environmental	Open in IMG/M
3300027503	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8d	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300028086	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8h	Environmental	Open in IMG/M
3300028089	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028258	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Law_RepB_8d	Environmental	Open in IMG/M
3300028267	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028269	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepA_8h	Environmental	Open in IMG/M
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034166	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079	Environmental	Open in IMG/M
3300034682	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-4-A	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM34_10203082	3300001843	Marine Plankton	MKLFRRLLLVLSVATAVVGILRVGGGGKSRVTTKQGGWRSY
RCM35_11097751	3300001844	Marine Plankton	LLVLSVATSVVGILRVGGGGKSRVTTKQGGWRSYSPPK*
S2t7BSb_116509562	3300002145	Marine	MKLFRRLLLVLSVASAVVGILRFGGGSSKSRVTTKQGGWRTYTPPK*
codie8draft_10468292	3300002733	Coal-Bed Methane Well	MKLFRRLLLVLSVATAVVGILRFGGSEKSRVTTKQGGWRNYSSPE*
Ga0076948_1000410101	3300005739	Lake Water	MKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTK*
Ga0076948_100418311	3300005739	Lake Water	MKLFRRLLLVLSVATAVVGVLRFGGGGKSRVTTKQGGWRSYTPPK*
Ga0076948_10070718	3300005739	Lake Water	MKLFRRLLLVLSVATAVLGIIRFGGSGKARVTTKQGGWRNYSPPS*
Ga0076948_10083513	3300005739	Lake Water	MKLFSRLLLVLSVATAVVGVLRFGGNGKSRVTTKQGGWRSYSPPK*
Ga0076948_10182302	3300005739	Lake Water	MKLFRRLLLVLSVATAVVGILRVGGGGKQRVTTKQGGWRAYTPPK*
Ga0076948_10345523	3300005739	Lake Water	MKLFRRLLLVLSVATAVVGILRVGGGGKSRVTTKQGGWRSYSPPK*
Ga0076948_10363933	3300005739	Lake Water	MKLFRRLLLVLSVATAVVGILRVGGGGKQRVTTKQGGWRAYTPPKSGVS*
Ga0079957_10092194	3300005805	Lake	MKLFRRLLLVLSVATAVVGILRVGGGGKSRVTTKQGGWRNFSPPQ*
Ga0075470_100145861	3300006030	Aqueous	MKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTKG*
Ga0075470_101815042	3300006030	Aqueous	MKLFRRLLLVLSVASTVVGILRFGGSSKAKVTTKQGGWRSYSPPK*
Ga0075471_100056692	3300006641	Aqueous	MKLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRSVRVDTDFK*
Ga0075473_100244791	3300006875	Aqueous	MKLFRRLLLVLSVASAVVGILRFGGSSKSKVTTKQGGWRTTRLDNEPQ*
Ga0102532_10149204	3300007094	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRVGGGGKQRVTTKQGGWRPYTPPK*
Ga0103958_10462391	3300007212	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRVGGGGKSRVTTKQGGW
Ga0103959_10002642	3300007214	Freshwater Lake	VKLFRRLLLVLSVATAVVGIIRFGGSEKSRVTTKQGGWRGFTPPE*
Ga0075458_101226881	3300007363	Aqueous	RLLLVLSVASTVVGILRFGGSSKAKVTTKQGGWRSYSPPK*
Ga0110929_10460062	3300008072	Water Bodies	MKLFRRLLLVLSVATAVVGILRVGGGGKQRVTTKQGGWRAYTPPKSEVS*
Ga0116204_10199265	3300010293	Anoxic Lake Water	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTR*
Ga0116204_10243472	3300010293	Anoxic Lake Water	VKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK*
Ga0116204_11605851	3300010293	Anoxic Lake Water	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPGEGQRL*
Ga0116204_12245241	3300010293	Anoxic Lake Water	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK*
Ga0129342_10435001	3300010299	Freshwater To Marine Saline Gradient	TMKLFRRLLLVLSVASTVVGILRFGGSSKAKVTTKQGGWRSTRFESHQL*
Ga0129342_12289811	3300010299	Freshwater To Marine Saline Gradient	TMKLFRRLLLVLSVASTVVGILRFGGSSKAKVTTKQGGWRSYSPPK*
Ga0136656_12914932	3300010318	Freshwater To Marine Saline Gradient	KLFRRLLLVLSVASTVVGILRFGGSSKAKVTTKQGGWRSTRFESHQL*
Ga0129333_101227733	3300010354	Freshwater To Marine Saline Gradient	MKLFSRLLLVLSVATAVVGVLKFGGNGKSRVTTKQGGWRSYSPPK*
Ga0129333_101293354	3300010354	Freshwater To Marine Saline Gradient	MKLFRRLLLVLSVATAVVGILRVGGGGKSRVTTKQGGWRNFSPQQ*
Ga0129333_101800921	3300010354	Freshwater To Marine Saline Gradient	DEHEMKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTKG*
Ga0129333_105096842	3300010354	Freshwater To Marine Saline Gradient	MKLFRRLLLVLSVATAVVGILRVGGGGKSRVTTKQGGWRNYSPPQ*
Ga0129333_112174491	3300010354	Freshwater To Marine Saline Gradient	LVLSVATAVVGILRVGGGGKSRVTTKQGGWRNFSPPQ*
Ga0129336_100804304	3300010370	Freshwater To Marine Saline Gradient	MKLFRRLLLVLSVASAVLGILRFGGSSKAKVTTKQGGWRSVRVDTDFK*
Ga0129336_102488952	3300010370	Freshwater To Marine Saline Gradient	MKLFRRLMLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPPKG*
Ga0119955_11570892	3300012006	Freshwater	MKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRSYTPTK*
Ga0163212_12123251	3300013087	Freshwater	HDKARTEMKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK*
Ga0163212_12657002	3300013087	Freshwater	VKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPGEGQRL*
Ga0163210_12419102	3300013091	Freshwater	LKLFRRLLLVLSVATAVVGILRFGGSGKQRATTKQGGWRSYEPTK*
(restricted) Ga0172374_10207262	3300013122	Freshwater	MKLFRRLILVLSVATAVVGILRFGGGGKQRVTTKQGGWRAYTPPK*
(restricted) Ga0172374_12645992	3300013122	Freshwater	MLEASRYMKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK*
(restricted) Ga0172373_102362802	3300013131	Freshwater	VQTYLYINVKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK*
(restricted) Ga0172373_104755581	3300013131	Freshwater	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSY
(restricted) Ga0172372_100519395	3300013132	Freshwater	MKLFSRLLLVLSVATAVVGVLRFGGNGKSRVTTKQGGWRSYEPTK*
Ga0169931_101872984	3300017788	Freshwater	MLTSVKLVRLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0169931_104038302	3300017788	Freshwater	LDSNLPHDKARTELKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0169931_105970931	3300017788	Freshwater	VKLFRRLLLVLSVASAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0169931_106899292	3300017788	Freshwater	VKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTQ
Ga0169931_107917072	3300017788	Freshwater	LLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0194113_100139659	3300020074	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRGYEPTK
Ga0194113_101227835	3300020074	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0194113_102936143	3300020074	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPGEGQRL
Ga0194111_106988532	3300020083	Freshwater Lake	MKLFRRLLLVMSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTR
Ga0194110_100975283	3300020084	Freshwater Lake	MKHFSRLLLVLSVATAVVGVVRFGGNGKSRVTTKQGGWRSYAPPK
Ga0194110_103184782	3300020084	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTR
Ga0194134_100147358	3300020179	Freshwater Lake	MKLFRRLLLVLSVASAVVGILRFGGSSKQRVTTKQGGWRTFNPPK
Ga0194134_100465491	3300020179	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPT
Ga0194134_101101952	3300020179	Freshwater Lake	VRLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0194134_102939751	3300020179	Freshwater Lake	EMKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRGYEPTK
Ga0194115_101451263	3300020183	Freshwater Lake	MLTSVKLVRLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSY
Ga0194118_100955214	3300020190	Freshwater Lake	MKLFRRLLLVLSVASAVVGILRFGGSGKQRVTTKQGGWRSY
Ga0194131_103377423	3300020193	Freshwater Lake	MKLLRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGW
Ga0194128_102974251	3300020197	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRGYE
Ga0194121_100826351	3300020200	Freshwater Lake	RPRTEMKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRGYEPTK
Ga0194121_105067801	3300020200	Freshwater Lake	MKVFSRLLLVLSVATAVVGVLRFGGNGKSRVTTKQGGWRSYSP
Ga0194116_102980691	3300020204	Freshwater Lake	KARTEMKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0194116_105692722	3300020204	Freshwater Lake	VKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0194132_101320383	3300020214	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRS
Ga0194132_104114272	3300020214	Freshwater Lake	HFSRLLLVLSVATAVVGVVRFGGNGKSRVTTKQGGWRSYAPPK
Ga0194119_100771991	3300020220	Freshwater Lake	MKFLRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRGYEPT
Ga0194119_105360041	3300020220	Freshwater Lake	FRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0194125_100277801	3300020222	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEP
Ga0194125_105644301	3300020222	Freshwater Lake	VLDALNHSRMLTSVKLVRLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPT
Ga0208084_10003066	3300020499	Freshwater	MKLFRRLLLVLSVATAVVGILRVGGGGKSRVTTKQGGWRGYSPLE
Ga0208231_100069713	3300020557	Freshwater	MKLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRSVRVDTDFK
Ga0194129_101287141	3300020578	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYE
Ga0194129_102491001	3300020578	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQCVTTKQGGWRSYEPGEGQRL
Ga0194126_100835121	3300020603	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQG
Ga0194126_107028481	3300020603	Freshwater Lake	VLSVATAVVGVLRFGGNGKSRVTTKQGGWRSYEPT
Ga0194122_105617331	3300021092	Freshwater Lake	KVFSRLLLVLSVATAVVGVLRFGGNGKSRVTTKQGGWRSYSPPK
Ga0194123_100505551	3300021093	Freshwater Lake	MKLFRRLLLVLSVASAVVGILRFGGSGKQRVTTKQGGWRSYEPTR
Ga0194123_101993331	3300021093	Freshwater Lake	MLTSVKLVRLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWR
Ga0194123_104391082	3300021093	Freshwater Lake	MKFFSRLLLVLSVATAVVGVLRFGGNGKSRVTTKQGG
Ga0194130_100700301	3300021376	Freshwater Lake	MLTSVKLVRLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYE
Ga0194130_101447521	3300021376	Freshwater Lake	HDKARTEMKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0194117_101844402	3300021424	Freshwater Lake	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWCSYEPTK
Ga0222714_100202761	3300021961	Estuarine Water	MKLFRRLLLVLSVASAVVGILRFGGGSSKSRVTTKQGGWRTFDLKSDKK
Ga0222714_101812372	3300021961	Estuarine Water	MKLFRRLLLVLSVASTVVGILRFGGSSKAKVTTKQGGWRSYSPPK
Ga0214917_100550233	3300022752	Freshwater	MKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRSYSKRS
(restricted) Ga0233424_1000041433	3300023208	Freshwater	MKLFRRLLLVLSVATAVVGILRVGGGGKQRVTTKQGGWRAYTPSK
(restricted) Ga0233424_100167902	3300023208	Freshwater	MKLFRRLLLVLSVAAAVVGILRVGGGKQRVTTKQGGWRTYTPPKSGI
(restricted) Ga0233424_100251502	3300023208	Freshwater	MKLFRRLLLVLSVAAAVVGILRVGGGKQRVTTRQGGWRTYTPPK
(restricted) Ga0233424_100433694	3300023208	Freshwater	MKLFRRLLLVLSVAAAVVGILRVGGGKQRVTTKQGGWRTYTPPK
Ga0255207_10204682	3300024277	Freshwater	EHEMKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTK
Ga0255167_10354462	3300024350	Freshwater	LVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTK
Ga0255169_10098971	3300024356	Freshwater	RLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTQPKG
Ga0255169_10584271	3300024356	Freshwater	MKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYT
Ga0255203_10102835	3300024491	Freshwater	MKLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRSTRLDGEQ
Ga0255199_10519691	3300024498	Freshwater	RLLLVLSVAYAVVGILRFGGSSKAKVTTKQGGWRSYTPPK
Ga0255181_10863802	3300024502	Freshwater	VLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTQPKG
Ga0255176_10135973	3300024507	Freshwater	RRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTK
Ga0255186_10217072	3300024512	Freshwater	MKLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRSTRLDGEQL
Ga0255268_11746342	3300024572	Freshwater	EMKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTK
Ga0209609_101805002	3300025145	Anoxic Lake Water	PHDKARTEMKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPTK
Ga0208047_10195375	3300025279	Freshwater	MKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEPGEGQ
Ga0208048_10190312	3300025283	Freshwater	MKPFSRLLLVLSVATAVVGVLRFGGNGKSRVTTKQGGWRSYSPPK
Ga0208048_11261082	3300025283	Freshwater	VKLFRRLLLVLSVATAVVGILRFGGSGKQRVTTKQGGWRSYEP
Ga0208546_11126061	3300025585	Aqueous	MKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTKG
Ga0208147_10040004	3300025635	Aqueous	MKLFRRLLLVLSVASAVVGILRFGGSSKSKVTTKQGGWRTTRLDNEPQ
Ga0208542_11426651	3300025818	Aqueous	MKLFRRLLLVLSVASTVVGILRFGGSSKAKVTTKQGGWRSTRFEGH
Ga0255220_10834272	3300027306	Freshwater	LVLSVASAVVGILRFGGSSKAKVTTKQGGWRSTRLDGEQL
Ga0255182_10110961	3300027503	Freshwater	RLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYTPTK
Ga0208942_10918952	3300027627	Freshwater Lentic	KLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRTYSPPK
Ga0209357_10014255	3300027656	Freshwater Lake	MKLFRRLLLVLSVALAVVGILRFGGSSKSRVTTKQGGWRTYTPPK
Ga0255201_10590042	3300028086	Freshwater	FRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRSTRLDGEQL
Ga0255299_11007732	3300028089	Freshwater	KLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRSYTPPK
Ga0255214_10382551	3300028258	Freshwater	LFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRSTRLDGEQL
Ga0256358_10533142	3300028267	Freshwater	FRRLLLVLSVAYAVVGILRFGGSSKAKVTTKQGGWRSYTPPK
Ga0255193_10346303	3300028269	Freshwater	MKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQ
Ga0119944_10196174	3300029930	Aquatic	MKLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGG
Ga0119944_10266282	3300029930	Aquatic	MKLFRRLLLVLSVATAVVGILRVGGGGKQRVTTKQGGWRAYTPPK
Ga0334982_0046020_3_119	3300033981	Freshwater	MKLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWR
Ga0334985_0282297_2_109	3300034018	Freshwater	MKLFRRLLLVLSVASAVVGILRFGGSSKSRVTTKQG
Ga0310130_0194268_48_185	3300034073	Fracking Water	MKLFRRLLLVLSVASAIVGILRFGGSSKTKVTTKQGAWRPYNPTK
Ga0335056_0079427_2_136	3300034120	Freshwater	MKLFRRLLLVLSVASAVVGILRFGGSSKAKVTTKQGGWRSVRVDT
Ga0335016_0515839_110_247	3300034166	Freshwater	VKLFRRLLLVLSVATAVVGIIRFGGSEKSRVTTKQGGWRGFTPPE
Ga0310128_030374_316_453	3300034682	Fracking Water	MTLFRRLLLVLSVATAVVGILRFGGSEKSRVTTKQGGWRNYSPTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters