Metagenome / Metatranscriptome Family F065654

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065654
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	96 residues
Representative Sequence	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVKSENGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Number of Associated Samples	95
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.73 %
% of genes near scaffold ends (potentially truncated)	25.98 %
% of genes from short scaffolds (< 2000 bps)	81.89 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.835 % of family members)
Environment Ontology (ENVO)	Unclassified (29.134 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.071 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.78% β-sheet: 25.40% Coil/Unstructured: 46.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain	d1jiha2	1jih	0.70413
d.58.30.1: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK	d1f9ya_	1f9y	0.69437
d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain	d5a0ya1	5a0y	0.69328
e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain	d3gv7b1	3gv7	0.68902
d.58.19.1: Bacterial exopeptidase dimerisation domain	d1vgya2	1vgy	0.68369

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF07995	GSDH	37.01
PF00753	Lactamase_B	8.66
PF12412	DUF3667	5.51
PF13360	PQQ_2	2.36
PF07715	Plug	1.57
PF00326	Peptidase_S9	1.57
PF00106	adh_short	0.79
PF00580	UvrD-helicase	0.79
PF01011	PQQ	0.79
PF13786	DUF4179	0.79
PF13640	2OG-FeII_Oxy_3	0.79
PF07589	PEP-CTERM	0.79
PF00132	Hexapep	0.79
PF01370	Epimerase	0.79
PF02777	Sod_Fe_C	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	37.01
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.79
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.79
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.79
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	71.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.15 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	63.78 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	63.78 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.79 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0735366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1040	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0737108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	694	Open in IMG/M
3300000787\|JGI11643J11755_11609390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	707	Open in IMG/M
3300000787\|JGI11643J11755_11637226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	705	Open in IMG/M
3300000956\|JGI10216J12902_102265335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	861	Open in IMG/M
3300000956\|JGI10216J12902_120998334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	922	Open in IMG/M
3300003267\|soilL1_10047367	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300004013\|Ga0055465_10245377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	602	Open in IMG/M
3300004025\|Ga0055433_10064211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	773	Open in IMG/M
3300004114\|Ga0062593_100038772	All Organisms → cellular organisms → Bacteria → Proteobacteria	2827	Open in IMG/M
3300004114\|Ga0062593_102403017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	595	Open in IMG/M
3300004463\|Ga0063356_100330444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1912	Open in IMG/M
3300004463\|Ga0063356_103471736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	679	Open in IMG/M
3300005295\|Ga0065707_10496424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	761	Open in IMG/M
3300005334\|Ga0068869_100257517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1396	Open in IMG/M
3300005336\|Ga0070680_100141678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2016	Open in IMG/M
3300005336\|Ga0070680_100355587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1246	Open in IMG/M
3300005354\|Ga0070675_100610291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	990	Open in IMG/M
3300005441\|Ga0070700_101060045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	670	Open in IMG/M
3300005444\|Ga0070694_100577531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	903	Open in IMG/M
3300005458\|Ga0070681_11591653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300005890\|Ga0075285_1021470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	774	Open in IMG/M
3300006755\|Ga0079222_10603055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	839	Open in IMG/M
3300006844\|Ga0075428_100021197	All Organisms → cellular organisms → Bacteria → Proteobacteria	7197	Open in IMG/M
3300006844\|Ga0075428_100029622	All Organisms → cellular organisms → Bacteria → Proteobacteria	6056	Open in IMG/M
3300006865\|Ga0073934_10001688	All Organisms → cellular organisms → Bacteria → Proteobacteria	51167	Open in IMG/M
3300006894\|Ga0079215_10100203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1273	Open in IMG/M
3300006918\|Ga0079216_10245910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1018	Open in IMG/M
3300007004\|Ga0079218_10012169	All Organisms → cellular organisms → Bacteria → Proteobacteria	4314	Open in IMG/M
3300007004\|Ga0079218_10120566	All Organisms → cellular organisms → Bacteria → Proteobacteria	1851	Open in IMG/M
3300007004\|Ga0079218_10213722	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300007004\|Ga0079218_10619904	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300007004\|Ga0079218_13579540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	527	Open in IMG/M
3300007076\|Ga0075435_100937706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	755	Open in IMG/M
3300009087\|Ga0105107_10153789	All Organisms → cellular organisms → Bacteria → Proteobacteria	1618	Open in IMG/M
3300009087\|Ga0105107_10284712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1153	Open in IMG/M
3300009094\|Ga0111539_10979094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	983	Open in IMG/M
3300009148\|Ga0105243_10020018	All Organisms → cellular organisms → Bacteria → Proteobacteria	5074	Open in IMG/M
3300009156\|Ga0111538_10981519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1069	Open in IMG/M
3300009162\|Ga0075423_12930085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	523	Open in IMG/M
3300009609\|Ga0105347_1023053	All Organisms → cellular organisms → Bacteria → Proteobacteria	2148	Open in IMG/M
3300009609\|Ga0105347_1503614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	526	Open in IMG/M
3300009610\|Ga0105340_1526996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	528	Open in IMG/M
3300010037\|Ga0126304_10592900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	746	Open in IMG/M
3300010403\|Ga0134123_12206732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	613	Open in IMG/M
3300011425\|Ga0137441_1109489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	674	Open in IMG/M
3300011430\|Ga0137423_1247555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	528	Open in IMG/M
3300011432\|Ga0137428_1047151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1134	Open in IMG/M
3300011436\|Ga0137458_1009829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2154	Open in IMG/M
3300011436\|Ga0137458_1207339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	596	Open in IMG/M
3300011439\|Ga0137432_1060349	All Organisms → cellular organisms → Bacteria → Proteobacteria	1150	Open in IMG/M
3300011440\|Ga0137433_1152894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	743	Open in IMG/M
3300012041\|Ga0137430_1095617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	837	Open in IMG/M
3300012212\|Ga0150985_117925076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300012899\|Ga0157299_10340193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300012943\|Ga0164241_10292859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1163	Open in IMG/M
3300012948\|Ga0126375_11917207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	521	Open in IMG/M
3300013096\|Ga0157307_1099601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	617	Open in IMG/M
3300014297\|Ga0075306_1019702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1033	Open in IMG/M
3300014308\|Ga0075354_1141840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	540	Open in IMG/M
3300014880\|Ga0180082_1079020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	726	Open in IMG/M
3300015252\|Ga0180075_1016517	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300015373\|Ga0132257_104545709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	505	Open in IMG/M
3300018422\|Ga0190265_10329687	All Organisms → cellular organisms → Bacteria → Proteobacteria	1607	Open in IMG/M
3300018422\|Ga0190265_11931896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	696	Open in IMG/M
3300018469\|Ga0190270_10198643	All Organisms → cellular organisms → Bacteria → Proteobacteria	1692	Open in IMG/M
3300018469\|Ga0190270_10585998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1083	Open in IMG/M
3300018469\|Ga0190270_13069948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	528	Open in IMG/M
3300018476\|Ga0190274_12159149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	654	Open in IMG/M
3300018481\|Ga0190271_10007738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7344	Open in IMG/M
3300018481\|Ga0190271_10025857	All Organisms → cellular organisms → Bacteria → Proteobacteria	4637	Open in IMG/M
3300018481\|Ga0190271_10629809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1193	Open in IMG/M
3300018481\|Ga0190271_10702098	All Organisms → cellular organisms → Bacteria → Proteobacteria	1134	Open in IMG/M
3300018481\|Ga0190271_11120980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	910	Open in IMG/M
3300019356\|Ga0173481_10001557	All Organisms → cellular organisms → Bacteria → Proteobacteria	5584	Open in IMG/M
3300019361\|Ga0173482_10321046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	690	Open in IMG/M
3300020060\|Ga0193717_1132374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	753	Open in IMG/M
3300022886\|Ga0247746_1031748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1179	Open in IMG/M
3300025310\|Ga0209172_10001597	All Organisms → cellular organisms → Bacteria → Proteobacteria	46277	Open in IMG/M
3300025521\|Ga0210083_1033465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	753	Open in IMG/M
3300025885\|Ga0207653_10045986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1442	Open in IMG/M
3300025907\|Ga0207645_10237500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1204	Open in IMG/M
3300025917\|Ga0207660_10398335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1108	Open in IMG/M
3300025933\|Ga0207706_11481530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	554	Open in IMG/M
3300025935\|Ga0207709_10027500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3278	Open in IMG/M
3300025938\|Ga0207704_10739993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	817	Open in IMG/M
3300026089\|Ga0207648_10046853	All Organisms → cellular organisms → Bacteria → Proteobacteria	3790	Open in IMG/M
3300027471\|Ga0209995_1078885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	565	Open in IMG/M
3300027552\|Ga0209982_1075787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300027695\|Ga0209966_1040033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	974	Open in IMG/M
3300027818\|Ga0209706_10093461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1499	Open in IMG/M
3300027818\|Ga0209706_10358081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	683	Open in IMG/M
3300027886\|Ga0209486_11007386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	560	Open in IMG/M
3300027907\|Ga0207428_11106592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300027909\|Ga0209382_11292364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	740	Open in IMG/M
3300028812\|Ga0247825_10129195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1724	Open in IMG/M
3300028812\|Ga0247825_10813525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	675	Open in IMG/M
3300031198\|Ga0307500_10030919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1212	Open in IMG/M
3300031226\|Ga0307497_10311658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	725	Open in IMG/M
3300031455\|Ga0307505_10043270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2009	Open in IMG/M
3300031820\|Ga0307473_10942305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	626	Open in IMG/M
3300031858\|Ga0310892_11185304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	544	Open in IMG/M
3300031908\|Ga0310900_11620257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	548	Open in IMG/M
3300031913\|Ga0310891_10020747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1637	Open in IMG/M
3300031943\|Ga0310885_10017240	All Organisms → cellular organisms → Bacteria → Proteobacteria	2629	Open in IMG/M
3300031944\|Ga0310884_10404459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	785	Open in IMG/M
3300032000\|Ga0310903_10100308	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300032000\|Ga0310903_10765662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	526	Open in IMG/M
3300032012\|Ga0310902_10612744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	724	Open in IMG/M
3300032013\|Ga0310906_10516300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	811	Open in IMG/M
3300032017\|Ga0310899_10210492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	866	Open in IMG/M
3300032122\|Ga0310895_10323570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	736	Open in IMG/M
3300032144\|Ga0315910_10032520	All Organisms → cellular organisms → Bacteria	3826	Open in IMG/M
3300032144\|Ga0315910_10033398	All Organisms → cellular organisms → Bacteria	3772	Open in IMG/M
3300032144\|Ga0315910_10067094	All Organisms → cellular organisms → Bacteria	2612	Open in IMG/M
3300032144\|Ga0315910_10106901	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300032144\|Ga0315910_10147252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1751	Open in IMG/M
3300032144\|Ga0315910_10195187	All Organisms → cellular organisms → Bacteria → Proteobacteria	1518	Open in IMG/M
3300032144\|Ga0315910_11133769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	610	Open in IMG/M
3300032157\|Ga0315912_10129467	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300032157\|Ga0315912_10187469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1622	Open in IMG/M
3300032180\|Ga0307471_103340964	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300032770\|Ga0335085_10131788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3170	Open in IMG/M
3300033004\|Ga0335084_10116884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2772	Open in IMG/M
3300033004\|Ga0335084_10353072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1517	Open in IMG/M
3300034667\|Ga0314792_139606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	639	Open in IMG/M
3300034692\|Ga0373917_0063983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.10%
Host-Associated	Host-Associated	18.11%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.78%
Plants	Host-Associated → Plants	18.11%
Aquatic	Environmental → Aquatic	17.32%
Bioremediation	Engineered → Bioremediation	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.78%
Sediment	Environmental → Aquatic → Sediment	10.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.87%
Freshwater	Environmental → Aquatic → Freshwater	3.15%
Marine	Environmental → Aquatic → Marine	2.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.57%
Metal	Engineered → Bioremediation → Metal	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.30%
Loam	Environmental → Terrestrial → Soil → Loam	5.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.15%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.36%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.57%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.57%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.02%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	10.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.15%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.15%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.36%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.79%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014297	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025521	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_07353662	3300000033	Soil	MSTLVFCVFDLXHATREXYLYAYMDLADXGLXQTVKSENGPSFTXPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
ICChiseqgaiiDRAFT_07371081	3300000033	Soil	MSTLVFCVFDLSHATREXYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGLKGTFFL
JGI11643J11755_116093902	3300000787	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVXSENGPXFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGLKGTFFLVASGDWACAGEAT*
JGI11643J11755_116372261	3300000787	Soil	MSTLVFCVFDLTHATREDYLYAYMDLADVGLKQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
JGI10216J12902_1022653352	3300000956	Soil	MTFLVFCVFDLSHATREDYLYAYMDLADLGLRQTIKSDGGPSFKLPGAAVMGTFDGRSVEDVRTTVSKKVQGIFKSRGLKGTFFVVASTDWACAGEST*
JGI10216J12902_1209983342	3300000956	Soil	MTFLVFCVFDLKHATREDYLYAYMDLADLGLKQTIKSESGPSFKLPASAVMGTFDGRSVEDVRSNVSKRVQGIFKGRSLTGTFFVVASADWACAGEST*
soilL1_100473672	3300003267	Sugarcane Root And Bulk Soil	MSTLVFWVFDLAHATREDYLYAYMDLADAGLRQTIKSETGPSFKLPASAVMGTFDGRSVEDIRSTVSKKVQGIFKARGLKGTFFLVASGDWACAGEST*
Ga0055465_102453771	3300004013	Natural And Restored Wetlands	MSTLVFCVFDLSHATREDYLYAYMDLADAGLRQTVKSENGPTFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0055433_100642112	3300004025	Natural And Restored Wetlands	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGLKGTFFLVASGDWACAGEAT*
Ga0062593_1000387724	3300004114	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQSVFKARGLKGTFFLVASGDWA
Ga0062593_1024030171	3300004114	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGAFKARGLKGTFFLVASGDWA
Ga0063356_1003304442	3300004463	Arabidopsis Thaliana Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQSVFKARGLKGTFFLVASGDWACAGEAT*
Ga0063356_1034717362	3300004463	Arabidopsis Thaliana Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADAGLRQTVNSENGPTFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEST*
Ga0065707_104964241	3300005295	Switchgrass Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKQVQGAFKARGLKGTFFLVASGDWACAGEA
Ga0068869_1002575172	3300005334	Miscanthus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVSSENGPSFKLPASAVMGTFDGRSVEDIRTTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0070680_1001416782	3300005336	Corn Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVNSENGPTFKLPASAVMGTFDGRSVEDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0070680_1003555874	3300005336	Corn Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVNSENGPSFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0070675_1006102911	3300005354	Miscanthus Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKQVQGAFKARGLKGTFFLVASGDWACAGEAT
Ga0070700_1010600451	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVNSENGPSFKLPASAVMGTFDGRSVEDIRTTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0070694_1005775311	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVKSDNGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0070681_115916532	3300005458	Corn Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVNSENGPSFKLPASAVMGTFDGRSVEDIRTTVSKKVQGIFKSRGLKGTFFLVGSGDWACAGEAT*
Ga0075285_10214701	3300005890	Rice Paddy Soil	SHATREDYLYAYMDLADAGLRQTVKSENGPTFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0079222_106030552	3300006755	Agricultural Soil	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVKSEGGPSFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0075428_1000211977	3300006844	Populus Rhizosphere	MSTLVFCVFDLTHATREDYLYAYMDLADVGLRQTVKSDNGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0075428_1000296221	3300006844	Populus Rhizosphere	THATREDYLYAYMDLADVGLRQTVKSDNGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0073934_1000168830	3300006865	Hot Spring Sediment	MTFLVFCVFDLKHATREDYLYCYMDLADLGLKQTVKSESGPSFKLPAAAVMGTFDGRSVEDVRSVVSKKVQSIFKSRGLSGTFFVVASADWACAGEAT*
Ga0079215_101002032	3300006894	Agricultural Soil	MSTLVFCVFDLSHATREDYLYAYMDLADVGLRQTVKSESGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0079216_102459101	3300006918	Agricultural Soil	MTFLVFCVFDLKAATREDYLYAYMDLATLGLRQTVKSDNGPSFKLPAAAVMGTFDGRSVEEVRGSVSRKVQGIFKSRGLNGTFFLIASHDWACAGEST*
Ga0079218_100121693	3300007004	Agricultural Soil	MSTLVFCVFDLSHATREDYLYAYMDLADVGLRQTVKSESGPNFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0079218_101205662	3300007004	Agricultural Soil	MTFLVFCVFDLSHATREDYLYAYMDLADLGLRQTIKSEGGPSFKLPGAAVMGTFDGRSVEDVRTTVSKKVQGIFKSRGLKGTFFVVASADWACAGEST*
Ga0079218_102137222	3300007004	Agricultural Soil	MTFLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPGSAVMGTFDGRSVEEVRSTVSKKVQSIFKSRSLNGTFFLVTSHDWACAGEST*
Ga0079218_106199042	3300007004	Agricultural Soil	MSTLVFCVFDLNHATREDYLYAYMDLADVGLRQTVKSENGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0079218_135795401	3300007004	Agricultural Soil	MSTLVFCVFDLTHATREDYLYAYMDLADAGLRQNVKSENGPSFKLPASAVMGTFDGRSVEDIRSTVSKKVQGIFKSRGLKGTFFLIASGDWACAGEAT*
Ga0075435_1009377061	3300007076	Populus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVKSDNGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFL
Ga0105107_101537892	3300009087	Freshwater Sediment	MSTLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPASAVMGTFDGRSVEDVRSTVSKKVQSIFKSRGLNGTFFLVASHDWACAGEAT*
Ga0105107_102847122	3300009087	Freshwater Sediment	MTFLVFCVFDLKHATREDYLYVYMDLADLGLKQTVKSENGPSFKLPAAAVMGTFDGRSVEDVRSIVSRKVQGILKSRGLNGTFFVVASSDWACAGEST*
Ga0111539_109790942	3300009094	Populus Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGAFKARGLKGTFFLVASGDWACAGEAT*
Ga0105243_100200183	3300009148	Miscanthus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVNSENGPSFKLPASAVMGTFDGRSVEDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0111538_109815192	3300009156	Populus Rhizosphere	VFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGAFKARGLKGTFFLVASGDWACAGEAT*
Ga0075423_129300852	3300009162	Populus Rhizosphere	HATREDYLYAYMDLADAGLRQTVKSDNGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0105347_10230532	3300009609	Soil	MSYLVLCVFDLRHANRDDYKYVYLDLAEIGLRRTVKSDGGPSFQLPGVTVMGTLDGRTVEEVRTRVAKSVQSILKSRSVRGEFFVVASSDWACAGEAT*
Ga0105347_15036142	3300009609	Soil	LVFCVFDLTHATREDYLYAYMDLADLGLRQTIKSEGGPSFKLPASAVMGTFDGPSVEDVRSTISKKVQSVFKSRGLNGTFFLVASHDWACAGEAT*
Ga0105340_15269962	3300009610	Soil	MSTLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSESGPSFKLPASAVMGTFDGPSVEDVRSTISKKVQSVFKSRGLNGTFFLVASHDWACAGEAT*
Ga0126304_105929001	3300010037	Serpentine Soil	MTFLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSDSGPTFKLPAAAVMGTFDGRSVDDVRTTVGKKVQGIFKSRGLNGTFFLVTSENWACAGEST*
Ga0134123_122067321	3300010403	Terrestrial Soil	MSTLVFCVFDLSHATREDYLYAYMDLADAGLHQTIKSESGPSFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWAC
Ga0137441_11094891	3300011425	Soil	MSTLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPASAVMGTFDGPSVEDVRSNVSKKVQSIFKSRGLHGTFFLVASHDWACAGEAT*
Ga0137423_12475551	3300011430	Soil	MSTLVFCVFDLKHATREDYLYAYMDLADLGLRQTIKSEGGPSFKLPASAVMGTFDGPSVEDVRSTISKKVQSVFKSRGLNGTFFLVASHDWACAGEST*
Ga0137428_10471511	3300011432	Soil	MSTLIFCVFDLTHATREDYLYAYMDLAELGLHQTVKSENGPSFKLPASAVMGTFDGRSVEDVRSTISKKVQGIFKSRGLHGTFFLVASHDWACAGEST*
Ga0137458_10098292	3300011436	Soil	VTYLVICVFDLREASRDDYLYAYLDLAELGLRRTVKSENGPSFQLPGAAVMGTADGRSVEEVRSAFGKKVQSIFKARGLRGDFFVVASADWACAGETT*
Ga0137458_12073392	3300011436	Soil	VTYLVICVFDLREASRDDYLYAYMDLAELGLRRTVKSENGPSFQLPGAAVMGTADGRSVEEVRSAFGKKVQSIFKARGLRGDFFVVASA
Ga0137432_10603492	3300011439	Soil	MSTLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSESGPSFKLPASAVMGTFDGPSVEDVRSTVSKKVQSVFKSRGLNGTFFLVASHDWACAGEST*
Ga0137433_11528942	3300011440	Soil	MSTLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSESGPSFKLPASAVMGTFDGPSVEDVRSTISKKVQSVFKSRAQNDTFFLVPSHDWACAGEAT*
Ga0137430_10956171	3300012041	Soil	MSTLVFCVFDLKHATREDYLYAYMDLADLGLRQTIKSEGGPSFKLPASAVMGTFDGPSVEDVRSTISKKVQSVFKSRGLNGTFFLVASHDWACAGEAT*
Ga0150985_1179250763	3300012212	Avena Fatua Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVKSESGPSFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGSFFLVASGDWACAGEAT*
Ga0157299_103401931	3300012899	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKQVQGAFKARGLKGTFFLVASGDWACAGEAT*
Ga0164241_102928592	3300012943	Soil	MSTLVFCVFDLSHATREDYLYAYMDLDDIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSMLSKKVQGAFKARGLKGTFFLVASGDWACAGEAT*
Ga0126375_119172071	3300012948	Tropical Forest Soil	MSTLVFVVFDLSHATREDYLYAYMDLADAGLRQTIKSEAGPGFKLPASAVMGTFDGRSVEDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0157307_10996011	3300013096	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGLKGTFFLVASGDWACAGEST*
Ga0075306_10197021	3300014297	Natural And Restored Wetlands	MSFLVFCVFDLKDAKHDDYMYAYMDLATLGLRKTVRSDNGPSFKLPATAVMGTLEGRTVEEVRTAVAKKVQAIFKTRGLRGDFFLITSTDWACAGESSQAV*
Ga0075354_11418401	3300014308	Natural And Restored Wetlands	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSDNGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGL
Ga0180082_10790201	3300014880	Soil	TREDYLYAYMDLADLGLRQTIKSEGGPSFKLPASAVMGTFDGPSVEDVRSTISKKVQSVFKSRGLNGTFFLVASHDWACAGEAT*
Ga0180075_10165172	3300015252	Soil	VTYLVICVFDLREASRDDYLYAYLDLAELGLRRTVKSENGPSFQLPGAAVMGTADGRSVEEVRSAFGKKVQSIFKARGLRGDFFVFASADWACAGETT*
Ga0132257_1045457092	3300015373	Arabidopsis Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADAGLRQMVKSESGPSFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT*
Ga0190265_103296872	3300018422	Soil	MTFLVFCVFDLKHATREDYLYAYMDLAELGLRQTVKSENGPSFRLPAAAVMGTFDGRSVEDVRGTVGKKVQSIFKGRGLSGTFFIVASADWACAGEST
Ga0190265_119318961	3300018422	Soil	MTFLVVCVFDLKHATREDYLYAYMDLAELGLRQIVKSENGPSFKLPAAAVMGTFDGRSVEDVRGTVSKRIQGIFKGRGLSGTFFVVASADWACAGEST
Ga0190270_101986431	3300018469	Soil	MSTLIFCVFDLKHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPASAVMGTFDGPSVEDVRSNVSKKVQSIFKSRGLNGSFFLVASHDWACAGES
Ga0190270_105859981	3300018469	Soil	MTFLVFCVFDLAHATREDYLYAYMDLADLGLRQTIKSEGGPTFKLPGAAVMGTFDGRSVEDVRTTVSKKVQGIFKSRSLKGTFFVVASAD
Ga0190270_130699481	3300018469	Soil	MTFLVFCVFDLKNGTREDYLYAYMDLATLGLRQTVKSDNGPSFKLPAAAVMGTFDGRSVDEVRSLVSRKVQGIFKARGLNGTFFLVASSDWACAGEST
Ga0190274_121591491	3300018476	Soil	MTFLVFCVFELKNSTREDYLYAYMDLAALGLRQTVKSDNGPSFKLPAAAVMGTFEGRTIDEVRSIVSRNVQGIFKTRGLNGTFFLVASTDWACAGETT
Ga0190271_100077386	3300018481	Soil	MSTLIFCVFDLKHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPASAVMGTFDGPSVEDVRSNVSKKVQSIFKSRGLNGTFFLVASHDWACAGEST
Ga0190271_100258571	3300018481	Soil	REDYLYTYMDLATLGLRQTVKSDNGPSFKLPAAAVMGTFDGRSVDEVRSLVSRKVQGIFKARGLNGTFFLVASSDWACAGEST
Ga0190271_106298092	3300018481	Soil	LKHAKREDYLYAYMDLADMGLKQTVKSENGPSFKLPAAAVMGTFDGRSVEDVRSIVSKKVQGIFKARALNGTFFLVASADWACAGEST
Ga0190271_107020982	3300018481	Soil	MTFLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPGSAVMGTFDGRSIEEVRSTVSKQVQSIFKSRSLNGTFFLVTSHDWACAGEST
Ga0190271_111209802	3300018481	Soil	MTFLVFCVFDLKHATREDYLYAYMDLADMGLKQTVKSDNGPSFKLPAAAVMGTFEGRSVEDVRSIVSKKLQGIFKARSLNGTFFVVASADWACAGEST
Ga0173481_100015573	3300019356	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQSVFKARGLKGTFFLVASGDWACAGEAT
Ga0173482_103210461	3300019361	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGAFKARGLKGTFFLVASGDWACAGEAT
Ga0193717_11323742	3300020060	Soil	MSTLIFCVFDLTHATREDYLYAYMDLAELGLHQTVKSENGPSFKLPASAVMGTFDGRSVEDVRSTISKKVQSIFKSRGLHGTFFLVASHDWACAGEST
Ga0247746_10317481	3300022886	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQSVFKARGLKGT
Ga0209172_1000159733	3300025310	Hot Spring Sediment	MTFLVFCVFDLKHATREDYLYCYMDLADLGLKQTVKSESGPSFKLPAAAVMGTFDGRSVEDVRSVVSKKVQSIFKSRGLSGTFFVVASADWACAGEAT
Ga0210083_10334652	3300025521	Natural And Restored Wetlands	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGLKGTFFLVASGDWACAGEAT
Ga0207653_100459861	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVSSENGPSFKLPASAVMGTFDGRSVEDIRTTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0207645_102375001	3300025907	Miscanthus Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGAFKARGLKGTFFLVASGDWACAGEAT
Ga0207660_103983352	3300025917	Corn Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVNSENGPSFKLPASAVMGTFDGRSVEDIRTTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0207706_114815302	3300025933	Corn Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVSSENGPSFKLPASAVMGTFDGRSVEDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0207709_100275001	3300025935	Miscanthus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVNSENGPSFKLPASAVMGTFDGRSVEDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0207704_107399931	3300025938	Miscanthus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVSSENGPSFKLPASAVMGTFDGRSVEDIRTTVSKKVQGIFKSRGLKGTF
Ga0207648_100468533	3300026089	Miscanthus Rhizosphere	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVNSENGPTFKLPASAVMGTFDGRSVEDIRTTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0209995_10788851	3300027471	Arabidopsis Thaliana Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADAGLRQTVNSENGPSFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0209982_10757871	3300027552	Arabidopsis Thaliana Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0209966_10400332	3300027695	Arabidopsis Thaliana Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADAGLHQTIKSESGPSFKLPASAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0209706_100934612	3300027818	Freshwater Sediment	MSTLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPASAVMGTFDGRSVEDVRSTVSKKVQSIFKSRGLNGTFFLVASHDWACAGEAT
Ga0209706_103580812	3300027818	Freshwater Sediment	MTFLVFCVFDLKHATREDYLYVYMDLADLGLKQTVKSENGPSFKLPAAAVMGTFDGRSVEDVRSIVSRKVQGILKSRGLNGTFFVVASSDWACAG
Ga0209486_110073861	3300027886	Agricultural Soil	MTFLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPGSAVMGTFDGRSVEEVRSTVSKKVQSIFKSRSLNGTFFL
Ga0207428_111065922	3300027907	Populus Rhizosphere	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGL
Ga0209382_112923642	3300027909	Populus Rhizosphere	MSTLVFCVFDLTHATREDYLYAYMDLADVGLRQTVKSDNGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0247825_101291953	3300028812	Soil	MSTLVFCVFDLTHATREDYLYAYMDLADVGLKQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGT
Ga0247825_108135252	3300028812	Soil	MTFLVFCVFDLKHATREDYLYAYMDLADLGLKQTIKSESGPSFKLPASAVMGTFDGRSVEDVRSNVSKRVQGIFKGRSLTGTFFVVASADWACAGEST
Ga0307500_100309192	3300031198	Soil	MATLVFCVFDLSHATREDYLYAYMDLADAGLRQSVSSENGPSFKLPASAVMGTFDGRSVEDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0307497_103116582	3300031226	Soil	AMSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVKSDNGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0307505_100432704	3300031455	Soil	MTHLVFCVFDLKHATREDYLYAYMDLADLGLKQTVKSENGPSFKLPAAAVMGTFDGRSVEDVRSTISKKVQGIFKARGLAGTFFVVASADWACAGEST
Ga0307473_109423051	3300031820	Hardwood Forest Soil	MSTLVFCVFDLSHATREDYLYAYMDLADAGLRQTVKSESGPSFKLPASAVMGTFDGRSVEDIRSAVSKKVQGIFKSRGLKGTFFLIASGDWACAGEAT
Ga0310892_111853041	3300031858	Soil	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVKSENGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0310900_116202571	3300031908	Soil	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVKSDNGPSFKLPASAVMGTFDGRSVEDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0310891_100207472	3300031913	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0310885_100172402	3300031943	Soil	MSTLVFCVFDLTHATREDYLYAYMDLADVGLRQTVKSDNGPSFTLPGSAVMGTFDGRSVDDIRSTVSKKVQGIFKSRGLKGTFFLVASGDWACAGEST
Ga0310884_104044591	3300031944	Soil	MSTLVFCVFDLTHATREDYLYAYMDLADVGLRQTVKSDNGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTSFLVASGDWACAGEAT
Ga0310903_101003082	3300032000	Soil	MSTLVFCVFDLTHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGAFKARGLKGTFFLVASGDWACAGEAT
Ga0310903_107656622	3300032000	Soil	KNATREDYLYTYMDLATLGLRQTVKSDNGPSFKLPAAAVMGTFDGRSVDEVRSLVSRKVQGIFKARGLNGTFFLVASSDWACAGEST
Ga0310902_106127442	3300032012	Soil	CVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGAFKARGLKGTFFLVASGDWACAGEAT
Ga0310906_105163002	3300032013	Soil	MSTLVFCVFDLAHATREDYLYAYMDLADAGLRQTVSSENGPSFKLPASAVMGTFDGRSVEDIRTTVSKKVQGIFKSRGLKGTFFLVASG
Ga0310899_102104922	3300032017	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQSVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGLKGTFFLVASGDWACAGEAT
Ga0310895_103235702	3300032122	Soil	MSTLVFCVFDLTHATREDYLYAYMDLADVGLRQTVKSDNGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGLKGTFFLVASGDWACAGEAT
Ga0315910_100325205	3300032144	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSSISKKVQGVFKARGLKGTFFLIASGDWACAGEAT
Ga0315910_100333983	3300032144	Soil	MTFLVFCVFDLKHATREDYLYAYMDLADLGLKQTIKSESGPSFKLPASAVMGTFDGRSVEDVRSNVSKRVQGIFKGRSLSGTFFVVASADWACAGEST
Ga0315910_100670942	3300032144	Soil	MSTLVFCVFDLTHATREDYLYAYMDLADVGLKQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT
Ga0315910_101069013	3300032144	Soil	MTFLVFCVFDLKHATREDYLYAYMDLADLGLKQTIKSESGPSFKLPAAAVMGTFDGRSVEDVRSTVSKKIQGIFKSRSLNGTFFVVASADWACAGEST
Ga0315910_101472522	3300032144	Soil	MTFLVFCVFDLKHATREDYLYAYMDLADLGLKQTVKSENGPSFKLPAAAVMGTFDGRSVEDVRSNVSKQVQGIFKARGLAGTFFVVASADWACAGEST
Ga0315910_101951872	3300032144	Soil	MSTLVFCVFDLQHATREDYLYAYMDLADLGLRQTVKSENGPSFKLPASAVMGTFDGRSVEDVRSTVSKKVQSIFKSRGLNGTFFLVASHDWACAGEAT
Ga0315910_111337692	3300032144	Soil	MTFLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSENGPTFKLPAAAVMGTFDGRSVDDVRTTVSKKVQGIFKGRGLNGTFFLVTSENWACAGEST
Ga0315912_101294673	3300032157	Soil	MTFLVFCVFDLKHATREDYLYAYMDLADLGLRQTVKSDNGPTFKLPAAAVMGTFDGRSVDDVRTTVSKKVQGLFKARGLNGTFFLVTSENWACAGEST
Ga0315912_101874692	3300032157	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADLGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGVFKARGLKGTFFLVASGDWACAGEAT
Ga0307471_1033409642	3300032180	Hardwood Forest Soil	NREDYLYVYMELASLGLRKIVKSENGPGFKLPSTAVLGTFDGESVDEVRSLVGKKVQAALEAHGLHGDFFVVASHDWACAGESL
Ga0335085_101317882	3300032770	Soil	MTFLVLCVFDLRRADREDYLHVYMELAGLGLRKTVKSENGPGFKLPSTAVLGTFEGQSVDEVRTLVGKKVQGILQARGLSGDFFVVASHDWACAGESL
Ga0335084_101168842	3300033004	Soil	MSFLVFCVFDLRRADREDYLHVYMELAALGLRKIVKSNNGPGFKLPSTAVLGTFEGQSVDEVRSLVGKKVQGILQARGLSGDFFVVASHDWACAGESL
Ga0335084_103530721	3300033004	Soil	NRSPTGSSREHADMTFLVLCVFDLRRADREDYLHVYMELAGLGLRKTVKSENGPGFKLPSTAVLGTFEGQSVDEVRTLVGKKVQGILQARGLSGDFFVVASHDWACAGESL
Ga0314792_139606_358_639	3300034667	Soil	MSTLVFCVFDLSHATREDYLYAYMDLADIGLRQTVKSENGPSFTLPGSAVMGTFDGRSVDDIRSTLSKQVQGAFKARGLKGTFFLVASGDWACA
Ga0373917_0063983_127_423	3300034692	Sediment Slurry	MSTLVLCVFDLTHATREDYLYAYMDLADVGLRQTVKSDNGPSFTLPGSAVMGTFDGRSVDDIRSTLSKKVQGIFKSRGLKGTFFLVASGDWACAGEAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065654

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences