NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065505

Metagenome / Metatranscriptome Family F065505

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065505
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 83 residues
Representative Sequence MHYLAPFPIIVGVVGAIAGLLWLVAAGSEEDGGPDTGLFFLFGAWYIVMRVLKALASDPMSVLPAFGILLGSAGLIWLGIVML
Number of Associated Samples 103
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 21.26 %
% of genes near scaffold ends (potentially truncated) 26.77 %
% of genes from short scaffolds (< 2000 bps) 87.40 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (50.394 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(8.661 % of family members)
Environment Ontology (ENVO) Unclassified
(51.181 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.205 % of family members)



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Multiple Sequence Alignments

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Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.
1INPhiseqgaiiFebDRAFT_1041322141
2INPhiseqgaiiFebDRAFT_1046953301
3INPhiseqgaiiFebDRAFT_1050136322
4A2065W1_100419482
5Ga0062593_1024739861
6Ga0063455_1005838292
7Ga0063356_1032532791
8Ga0070658_115009811
9Ga0070683_1008146841
10Ga0070690_1012363941
11Ga0068868_1007514951
12Ga0070687_1010502561
13Ga0070668_1002696642
14Ga0070675_1016831341
15Ga0070671_1004078463
16Ga0070671_1008452572
17Ga0070714_1000209751
18Ga0070739_104900781
19Ga0068853_1013670282
20Ga0070665_10000543611
21Ga0068857_1001959434
22Ga0068854_1002867103
23Ga0066654_102473681
24Ga0068856_1026866912
25Ga0068859_1014064932
26Ga0068859_1023633513
27Ga0068864_1011541622
28Ga0068864_1021606972
29Ga0068863_1003079942
30Ga0068858_1022376721
31Ga0068862_1010389722
32Ga0070717_100590932
33Ga0075030_1006672972
34Ga0075421_1015105872
35Ga0075421_1016332572
36Ga0075430_1003668972
37Ga0075431_1003928323
38Ga0075420_1001578973
39Ga0075425_1005428533
40Ga0079216_110544781
41Ga0075419_104201772
42Ga0079218_102143183
43Ga0079218_109937302
44Ga0079218_120236101
45Ga0079218_138100101
46Ga0066710_1045515351
47Ga0105240_103728573
48Ga0111539_110357542
49Ga0105245_100134949
50Ga0075418_125835411
51Ga0066709_1006758641
52Ga0105243_121209172
53Ga0105243_129699591
54Ga0105241_119636972
55Ga0105241_126484491
56Ga0105248_133996911
57Ga0114951_1000023139
58Ga0105237_105794762
59Ga0105237_114954511
60Ga0126314_110130631
61Ga0126310_114023501
62Ga0126306_115882562
63Ga0105239_104485641
64Ga0105239_117710741
65Ga0137362_105970312
66Ga0150985_1208481001
67Ga0153880_13738482
68Ga0150984_1074403002
69Ga0150984_1132831562
70Ga0150984_1207594572
71Ga0164307_110337452
72Ga0157370_104308862
73Ga0157369_108045302
74Ga0157374_108187372
75Ga0157374_116300401
76Ga0157372_106424501
77Ga0157372_107918452
78Ga0163163_125047911
79Ga0182024_111333711
80Ga0182027_122262202
81Ga0157376_101914883
82Ga0157376_127761891
83Ga0132258_123170782
84Ga0163161_120852611
85Ga0066669_110268862
86Ga0182009_100512914
87Ga0212088_10000035111
88Ga0179591_10942462
89Ga0207680_111743531
90Ga0207671_111772641
91Ga0207687_1000720210
92Ga0207664_101386443
93Ga0207644_106661361
94Ga0207661_114275381
95Ga0207667_107750602
96Ga0207668_112456451
97Ga0207677_110587651
98Ga0207677_116408071
99Ga0207702_122587271
100Ga0207641_102116572
101Ga0207698_112827412
102Ga0209131_11812123
103Ga0209450_1000003649
104Ga0209486_104562822
105Ga0209382_103305772
106Ga0209382_122937602
107Ga0209698_106015112
108Ga0268266_100045398
109Ga0268266_102598872
110Ga0302301_10715312
111Ga0302181_102492422
112Ga0302309_100166541
113Ga0299913_108192221
114Ga0307408_1003287342
115Ga0310686_10737352612
116Ga0307476_100039765
117Ga0307405_115426721
118Ga0308174_101267851
119Ga0307409_1013555751
120Ga0307409_1026740312
121Ga0307414_114177402
122Ga0308173_100783244
123Ga0308173_113799151
124Ga0335074_1000055638
125Ga0335074_110756691
126Ga0335073_108901841
127Ga0372946_0293075_378_629
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 64.86%    β-sheet: 0.00%    Coil/Unstructured: 35.14%
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Variant

1020304050607080MHYLAPFPIIVGVVGAIAGLLWLVAAGSEEDGGPDTGLFFLFGAWYIVMRVLKALASDPMSVLPAFGILLGSAGLIWLGIVMLCytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
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Predicted 3D Structure

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Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
50.4%49.6%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Freshwater Sediment
Freshwater Lake Sediment
Freshwater Lake Hypolimnion
Freshwater
Watersheds
Soil
Soil
Vadose Zone Soil
Serpentine Soil
Surface Soil
Soil
Agricultural Soil
Permafrost
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Soil
Soil
Fen
Permafrost
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Palsa
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
4.7%3.1%3.1%5.5%6.3%8.7%3.9%3.1%6.3%3.1%3.1%7.1%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10413221413300000364SoilVHYVAPIPIIFGVVGAIVGLLWLVAAGSDDDGGPEKSLFFLFGAWYIGMRVVKALFREPMSVLPAFGILLGSAALIWLGVIML*
INPhiseqgaiiFebDRAFT_10469533013300000364SoilVHYLAPIPIIIGVFGAIVAILWLVAAGSDKDGGPEASLFFLFGTWYIGMRVLKALINEPMSVLPACGIMLVSAALIWLGIAML*
INPhiseqgaiiFebDRAFT_10501363223300000364SoilMHYVAPIPIMFGAVGAIVGILWLVAAGSDKDGGPELGLFYLFGMWYIVIRVFKALSDEPMSVLPAXGILIVSAGLIWVGIXML*
A2065W1_1004194823300001537PermafrostMHYVAPIPIILGVIGAIVGLLWLVAAGSDNDGGPDTSLFFLFGMWYLAMRVLKALFSEPMSVLPAFGILLGSAALIWLGIVML*
Ga0062593_10247398613300004114SoilVHYVAPIPIILGVVGAIVGLLWLVAAGSDEDGGPEKSLFFLFGAWYIGMRVMKALFREPMSVLPGFGILLGSAALIWLGVIML*
Ga0063455_10058382923300004153SoilMHYLAPFPIIIGVVGVITGVVWLIAAGSEDDGGPDTGLFYVFGMLYVSLRVMKQLFSEPMSVLPAFAILLGSGALIWLGIAML*
Ga0063356_10325327913300004463Arabidopsis Thaliana RhizosphereMHYLAPFPIIIGVVGMIAGLLWLVAAGSDEDGGPDTGLFFLFGWWYIAIRVLKALSRDPMSVLPAFGILLGGAALIGLGIIML*
Ga0070658_1150098113300005327Corn RhizosphereMGRGTNLWGDVHYLAPFPIMFGVVGAIIGFLWLVAAGSEGDGGPEPGLFFIFGMGYIWLRVLRELISEPMNVLPGIGILVGSLGLIWLGYVMW*
Ga0070683_10081468413300005329Corn RhizosphereMHFLAPFPIMFGVIGAIVGILWLVAAGSDKDGGPEPNLFFVFGMWYIFVRVLKALADEPMSVLPAFGILIVSAGLIWVGVVML*
Ga0070690_10123639413300005330Switchgrass RhizosphereVHHIAPIPIIFGVIGAIVGLLWLVAAGSEEDGGPETGLFFVFGIWYIGLRVLKQLAREPMSVLPAFGIL
Ga0068868_10075149513300005338Miscanthus RhizosphereVHHIAPIPIIFGVIGAIVGLLWLVAAGSEEDGGPETGLFFVFGIWYIGLRVLKQLAREPMSVLPAFGILLGSAALIWLGIIML*
Ga0070687_10105025613300005343Switchgrass RhizosphereMCHLIFHEMHYIAPMPIIFGVVGVIVGLLWLVAAGSDKDGGPETGLFYLFGSWYIGMRVMKQLFSDPMSVLPAFGILIGSAGLIWLGVAML*
Ga0070668_10026966423300005347Switchgrass RhizosphereMHHVAPIPIIFGVVGAIVGLLWLVAAGSDEDGGPETGLFYVFGFWYIGVRVLKQLASDPMSVLPALGILIVSGGLIWLGIVML*
Ga0070675_10168313413300005354Miscanthus RhizosphereMHYVAPIPIIFGVIGAIVGLLWLVAAGSEEDGGPDTGMFWLFGGWYIGLRVMKQLGRDPMSVLPAFGILIGSAGLIWLGVVML*
Ga0070671_10040784633300005355Switchgrass RhizosphereVHHIAPIPIIFGVIGAIVGLLWLVAAGSEEDGGPETGLFFVFGIWYIGLRVLKQLAREPMSVLPAFGILLGSAALIWLG
Ga0070671_10084525723300005355Switchgrass RhizosphereTFHEMHYIAPMPIIFGVVGVIIGLLWLVAAGSDKDGGPETGLFYLFGSWYIGMRVMKQLFSDPMSVLPAFGILIGSAGLIWLGVAML*
Ga0070714_10002097513300005435Agricultural SoilCAGSCPECELAGSVSGTMHYVAPVPIIVGVIGVIAGLLWLIAAGSEEDGGPDTGLFFLFGFWYIGTRVLKALVTEPMSVLPAFGILLISAGLIWLGIVML*
Ga0070739_1049007813300005532Surface SoilMHYVAPIPIIIGVVGAIAGLLWLVAAGSEDDGGPDTGMFFLFGSWYLGARVMKALASDPMSVLPAFGILALSGGLIWLGIIML*
Ga0068853_10136702823300005539Corn RhizosphereMHYLAPLPIMLGVVGLIVGFMWLVAAGSEEDGGPDTTFFFLFGSWYLMLRVMKALMNDPMSVLPAFGILIGSGGL
Ga0070665_100005436113300005548Switchgrass RhizosphereMPGVAFRLMHYIAPIPIIAGVIGVIVAVMWLVAAGSENDGGPDTSLFFLFGWWYIGMRVLKELTRDPMSILPAFGILLGGAGLIWLGVVML*
Ga0068857_10019594343300005577Corn RhizosphereMHFLAPFPIMFGVIGAIVGILWLVAAGSDKDGGPEPNLFFVFGMWYIFVRVLKALADEPMSVLPAFGILIVSAGLIWVGV
Ga0068854_10028671033300005578Corn RhizosphereMIGVLGVICGLLWLFAVGSEEDGGPDSALFFVFGMLYIGARVMKALVDEPMSVLPAFGILVGSAGLIWLGVWMW*
Ga0066654_1024736813300005587SoilMHYIAPIPIIFGIVGAIVGLLWLIAAGSEEDGGPESGLFYLFGMWYIGMRVMKQLAREPMSVLPAFGILLGSAGLIWVGIIML*
Ga0068856_10268669123300005614Corn RhizosphereLSCINMHYLAPFPIMIGVLGVICGLLWLFAVGSEEDGGPDSALFFVFGMLYIGARVMKALVDEPMSVLPAFGILVGSAGLIWLGVWMW*
Ga0068859_10140649323300005617Switchgrass RhizospherePIIFGVIGAIVGLLWLVAAGSEEDGGPETGLFFVFGIWYIGLRVLKQLAREPMSVLPAFGILLGSAALIWLGIIML*
Ga0068859_10236335133300005617Switchgrass RhizosphereRARVNPCPPRICHLIFHEMHYIAPMPIIFGVVGVIIGLLWLVAAGSDKDGGPETGLFYLFGSWYIGMRVMKELFSDPMSVLPAFGILIGSAGLIWLGVAML*
Ga0068864_10115416223300005618Switchgrass RhizosphereMHHIAPIPIIFGVIGAIFGLLWLASVGSDEDGGPSQGLFFAFGIWYIAARVMKGLFRDPMSVLPAFGILLASGLLIWLGIVML*
Ga0068864_10216069723300005618Switchgrass RhizosphereVHHIAPIPIIFGIIGAIVGLLWLDAAGSEEDGGPETGLFFVFGIWYIGLRVLKQLAREPMSVLPAFGILLGSAALIWLGIIML*
Ga0068863_10030799423300005841Switchgrass RhizosphereMHYIAPIPIIAGVIGVIVAVMWLVAAGSENDGGPDTSLFFLFGWWYIGMRVLKELTRDPMSILPAFGILLGGAGLIWLGVVML*
Ga0068858_10223767213300005842Switchgrass RhizosphereLAPFPIMFGVIGAIVGILWLVAAGSDKDGGPEPNLFFLFGMWYILLRVLKALSDEPMSVLPAFGILIVSAGLIWVGIVML*
Ga0068862_10103897223300005844Switchgrass RhizosphereMHYVAPIPIIIGVVGVAAGLLWLVAAGSDEDGGPDTGLFFLFGATYIGMRVLKQLASDPMSVLPAFGILLGGGALIWLGILML*
Ga0070717_1005909323300006028Corn, Switchgrass And Miscanthus RhizosphereMHYIAPIPIIVGVIGAVAGLLWLVAAGSEEDGGPDTGLFFLFGVWYVGMRVLKALADEPMSVLPAFGILLVSAGLIWLGIVML*
Ga0075030_10066729723300006162WatershedsLSAARRTMHYIAPIPIIFGVIGVIVGLLWLVVAGSEGDGGPDLGLLFIFGRIYLLFRVSRLLFTEPMSVLPAFGILLVGAALIWLGILML*
Ga0075421_10151058723300006845Populus RhizosphereMHHVAPIPIILGVIGAIAGLLWLVAVGSDEDGGPDSGLFFFFGASYIAMRVCKAMVREPMSVLPAFGILLVSAALIWVGIVML*
Ga0075421_10163325723300006845Populus RhizosphereMHYVAPIPIIIGVVGVVAGLLWLVAAGSDEDGGPDSGLFFLFGAMYIGMRVLKQLASDPMSVLPAFGILLGGAGLIWLGIVML*
Ga0075430_10036689723300006846Populus RhizosphereMHYIAPIPIIIGVVGVVAGLLWLVAAGSDEDGGPDSGLFFLFGAMYIGMRVLKQLASDPMSVLPAFGILLGGAGLIWLGIVML*
Ga0075431_10039283233300006847Populus RhizosphereMHYIAPIPIIIGVVGVVAGLLWLVAAGSDDDGGPDSGLFFLFGAMYIGIRVLKQLASDPMSVLPAFGILLGGAGLIWLGIVML*
Ga0075420_10015789733300006853Populus RhizosphereMHYIAPIPIIIGVVGVVAGLLWLVAAGSDEDGGPDSGLFFLFGAMYIGIRVLKQLASDPMSVLPAFGILLGGAGLIWLGIVML*
Ga0075425_10054285333300006854Populus RhizosphereMHYIAPIPIIFGVAGAIVGLIWLVAAGSDEDGGPQEGLFYLFGVLYIGIRVIKQLSREPMSVLPAFGILLGSAALIWLGIKML*
Ga0079216_1105447813300006918Agricultural SoilMHYIAPIPIIIGIVGVIVGLLWLFAAGSEEDGGPSTGLFYVFGMMYIGIRVLKQLARDPMSVLPAFGILLGGGALIWLGILML*
Ga0075419_1042017723300006969Populus RhizosphereMHYIAPIPIIIGVVGVVAGLLWLVAAGSDEDGGPDSGLFFLFGAMYIGIRVLKQLASDPMSVLPAFGILLGGAGLIWVGIVML*
Ga0079218_1021431833300007004Agricultural SoilVHHVAPIPIIFGGIGVIVGLLWLVAAGSEEDGGPSTGLFFAFGSLYVVVRVVRQLFREPMSVLPAFGILLGGAALIWLGIVML*
Ga0079218_1099373023300007004Agricultural SoilMHYVAPIPIIFGVTGAIVGLLWLVAAGSDKDGGPDTSLFFLFGTWYIGVRVMKALFNEPMTVLPAFGILLASAGLIWLGIVML*
Ga0079218_1202361013300007004Agricultural SoilMHHIAPIPIILGIAGVIVGFLWLVAAGSDDDGGPNSGLFFVFGAWYIGMRVTKALFRDPMSVLPAFGLLLGGAALIWLGVVML*
Ga0079218_1381001013300007004Agricultural SoilMHYVAPIPIIIGVVGAIAGLLWLVAAGSDEDGGPNTSLFFLFGEWYITMRVFKALLREPMSVLPAFGILLGSAALI
Ga0066710_10455153513300009012Grasslands SoilYAAPIPIILGVIGAIAGLVWLVAAGSDDDGGPDSGLLFLFGAWYISIRVLKALFNDPMSVLPAFGILLASAALIWAGIVML
Ga0105240_1037285733300009093Corn RhizosphereMHYLAPFPIMIGVLGVICGLLWLFAVGSEEEGGPDSALFFVFGMLYIGARVMKALVDEPMSVLPAFGILVGSAGLIWLGVWMW*
Ga0111539_1103575423300009094Populus RhizosphereMHYVAPIPIIFGVIGAIVGLLWLVAAGSEEDGGPDTGMFWLFGGWYIGMRVMKQLGRDPMSVLPAFGILIGSAGLIWLGVVML*
Ga0105245_1001349493300009098Miscanthus RhizosphereMHYIAPIPIMFGVIGAIIGILWLVAAGSDKDGGPDTGLFFLFGTWYLMIRVLKALTDDPMSVLPAFGILILSGGLIWVGVVML*
Ga0075418_1258354113300009100Populus RhizosphereMHYLAPIPIIVGVIGAIAGLIWLVAAGSDEDGGPDTGILRVFGMGYVALRVLKQLFSDPMSVLPAFAILLGSGGLIWLGIAML*
Ga0066709_10067586413300009137Grasslands SoilMHYVAPMPIIIGVVGVIFGFLWLVSAGSDEDGGPNSGLFFLFGVWYIGMRVMKQLFREPMSVLPAFGFLIGGAGLIWLGVKML*
Ga0105243_1212091723300009148Miscanthus RhizosphereMFGVIGAIVGILWLVAAGSDKDGGPEVGLFYLFGMWYIFLRVLKALSDEPMSVLPAFGILIVSAGLIWLGVVML*
Ga0105243_1296995913300009148Miscanthus RhizosphereMHYIAPMPIIFGVVGVIIGLLWLVAAGSDKDGGPETGLFYLFGSWYIGMRVMKQLFSDPMSALPAFGILIGSAGLIWLGVAML*
Ga0105241_1196369723300009174Corn RhizosphereMHYIAPIPIIFGVVGAIVGILWLVAAGSDKDGGPDSGLFFLFGMWYIVIRILKALSSEPMTVLPAFGILLGSAGLIWLGVVML*
Ga0105241_1264844913300009174Corn RhizosphereMHYLAPFPIMIGVRGVICGLLWLFAVGSEEDGGPDSALFFVFGMLYIGARVMKALVDEPMSVLPAFGILVGSAGLIWLGVWMW*
Ga0105248_1339969113300009177Switchgrass RhizosphereMHYLAPFPIMFGVIGAIVGILWLVAAGSDKDGGPETGLFYLFGMWYIGLRVLKALSDEPMSVLPAFGILIVSAGLIWVGIVML*
Ga0114951_10000231393300009502FreshwaterVHYLAPFPIIFGVFGIILGLMWLVAAGSDEDGGPDTNMLFVFGRIYIAIRVIKALIREPMSVLPAFGILLISIALIWLGIVML*
Ga0105237_1057947623300009545Corn RhizosphereMHYLAPLPIMLGVVGVIVGFMWLVAAGSEEDGGPDTTFFFLFGSWYLMLRVMKALMNDPMSVLPAFGILIGSGGLVWLGIKMI*
Ga0105237_1149545113300009545Corn RhizosphereLSATMHYLAPFPIMFGVIGAIVGILWLVAAGSDKDGGPETGLFYLFGMWYIGLRVLKALSDEPMSVLPAFGILIVSAGLIRVGIVML*
Ga0126314_1101306313300010042Serpentine SoilMHYIAPIPIILGVVGAIAGLLWLVTAGSEDDGGPDTRIFRIFGFLHIALRVLKSLISDPMSVLPAFGILVVSAALIRVGIVML*
Ga0126310_1140235013300010044Serpentine SoilMHYIAPIPIIIGICGVIVGLLWLFAAGSDEDGGPSSGLFFLFGGMYIAVRVLKQLGRDPMSVLPALGILLGGALLI
Ga0126306_1158825623300010166Serpentine SoilIIVGVFGVVAGLLWLVAAGSEDDGGPSTGLFYVFGMIYLTHRVLKQLAKDPMSVLPAFGILAGGAGLIWLGVVIL*
Ga0105239_1044856413300010375Corn RhizosphereMLGVVGLIVGFMWLVAAGSEEDGGPDTTFFFLFGSWYLMLRVMKALMNDPMSVLPAFGILIGSGGLVWLGIKMI*
Ga0105239_1177107413300010375Corn RhizosphereMHYLAPFPIMFGVIGAIVGILWLVAAGSDKDGGPEPNLFFLFGMWYILLRVLKALSDEPMSVLPAFGILIVSAGLIWVGIVML*
Ga0137362_1059703123300012205Vadose Zone SoilMHYIAPIPIIFGVAGAIVGLLWLSAAGSNEDGGPDVSLFFLFGIWYIGMRVLKALFSEPMSVLPAFGILLGSAGLIWLGVVML*
Ga0150985_12084810013300012212Avena Fatua RhizosphereMHYVAPIPIIFGVVGAIVGILWLVSAGSEDDGGPDKSLFFVFGLLYIGLRVLKALFSEPTSVLPAFGILIASAGLIWLGVVML*
Ga0153880_137384823300012411Freshwater SedimentAPFPIIFGVFGIILGLMWLVAAGSDEDGGPDTNMLFVFGRIYIAIRVIKALIREPMSVLPAFGILLISIALIWLGIVML*
Ga0150984_10744030023300012469Avena Fatua RhizosphereMHYIAPIPIIFGVVGVIAGLLWLVAAGSDDDGGPDQGMFFLFGTWYIALRVLKQLFSEPMNVLPAFGILLGSGVLIWLGIKML*
Ga0150984_11328315623300012469Avena Fatua RhizospherePFPIMFGVIGAIVGILWLVAAGSDKDGGPEPNLFFVFGMWYIFVRVLKALADEPMSVLPAFGILIVSAGLIWVGIVML*
Ga0150984_12075945723300012469Avena Fatua RhizospherePIIFGVVGAIVGILWLVSAGSEDDGGPDKSLFFVFGLLYIGLRVLKALFSEPTSVLPAFVILIASAGLIWLGVVML*
Ga0164307_1103374523300012987SoilMHYLAPIPIIFGVVGAIAGILWLVSAGSEEDGGPDKGLFYVFGLLYIGIRVLKALFSEPMSVLPAFAILLASAGLIWLGVVML*
Ga0157370_1043088623300013104Corn RhizosphereMHYLAPFPIIFGVVGVIVGLLWLVAAGSENNGGPSTGLYYAFGMLYIGIRVTKQLMSEPMSVLPAFGFVIGGAALIWLGVIML*
Ga0157369_1080453023300013105Corn RhizosphereMHYIAPFPIIFGVVGAIVGVLWLIAAGSDKDGGPDTNLFFLFGSWYIGVRVMKALFNDPMSVLPAFGILAASAGLIWLGVVML*
Ga0157374_1081873723300013296Miscanthus RhizosphereMHYIAPFPIIFGVVGAIVGVLWLIAAGSDKDGGPDTSLFFLFGSWYIGVRVMQALFNDPMSVLPAFGILAASAGLIWLGVVML*
Ga0157374_1163004013300013296Miscanthus RhizosphereMHYLAPLPIMLGVVGLIVGFMWLVAAGSEEDGGPDTTFFFLFGSWYLMLRVMKALMNDPMSVLPAFGILIGSGGLIWLGVKMI*
Ga0157372_1064245013300013307Corn RhizosphereMHYLAPFPIMIGVLGVICGLLWLFAVGSEEDGGPDSALFFVFGMLYIGARVMKALVDEPMSVLPAFGILVGSAGLI
Ga0157372_1079184523300013307Corn RhizosphereMHYIAPIPIIIGVIGAIGGLLWLIAAGSDQHGGPDTGLFFVFGFWYIAVRVVKAFADDPMSVLPAFGILLVSGGLIWLGVVML*
Ga0163163_1250479113300014325Switchgrass RhizosphereRPFRSTRDLAVARIEPMHYIAPIPIILGVGGVIVGLLWLVAAGSDEDGGPSQGLFFAFGIWYIAARVMKGLFRDPMSVLPAFGILLASGLLIWLGIVML*
Ga0182024_1113337113300014501PermafrostMHYLAPLPIIIGVIVAIVGLLWLVAAGSENDGGPEPGLFFIFGIWYLVLRVVKALLSDPMSILPAFGILLGSAGLIWLGVVMY*
Ga0182027_1222622023300014839FenAPFPIIIGVVGVITGLFWLVGAGADEDGGPSTGLFYVFGWLYIGIRVFKQLCRDPMSVLPAFGILLASAVLIWLGIVML*
Ga0157376_1019148833300014969Miscanthus RhizosphereMHYLARFPIMIGGLGVICGLLWLFAAGAEEDGGPDSTMFTVFGMGYIMMRVMREFMRDPMSVLPAFGILAGSAGLIWLGWVMW*
Ga0157376_1277618913300014969Miscanthus RhizosphereMHYIAPFPIIIGVGGAIVAFLWLIAAGSDDDGGPEKGLFFLFGFLYIGLRVLKQLFREPMSVLPAFGILLGSAALIWVGAKML*
Ga0132258_1231707823300015371Arabidopsis RhizosphereMHYLAPFPIIIGVVGAITGLVWLVAAGSDEDGGPDTGLFYVFGMLYVSLRVMKQLFSEPMSVLPAFAILLGSGALIWLGIVML*
Ga0163161_1208526113300017792Switchgrass RhizosphereMCHLIFHEMHYIAPMPIIFGVVGVIIGLLWLVAAGSDKDGGPETGLFYLFGSWYIGMRVMKQLFSDPMSVLPAFGILIGSAGLIWLGVAML
Ga0066669_1102688623300018482Grasslands SoilMHYIAPIPIIFGIFGAILGLLWLVGAGSEEDGGPEKSLFFLFGTWYIGIRVMKQLFREPMSVLPAFGILLGSALLIWLGIVML
Ga0182009_1005129143300021445SoilLHHLAPIPIILGVIGAVAGVVWLVAAGSDEDGGPDSNVFFAFGALYIALRVLKTLVREPMSVLPAFGILLISAALIWLGVAML
Ga0212088_100000351113300022555Freshwater Lake HypolimnionVHYLAPFPIIFGVFGIILGLMWLVAAGSDEDGGPDTNMLFVFGRIYIAIRVIKALIREPMSVLPAFGILLISIALIWLGIVML
Ga0179591_109424623300024347Vadose Zone SoilMHYVAPIPIMLGVLGAIVGILWLVAAGSDKDGGPETGLFYLFGMWYIVIRVLKALSSEPMSVLPAFGILIVSAVLIWVGIVML
Ga0207680_1117435313300025903Switchgrass RhizosphereQHVHHIAPIPIIFGVIGAIVGLLWIVAAGSEEDGGPETGLFFVFGIWYIGLRVLKQLAREPMSVLPAFGILLGSAALIWLGIIML
Ga0207671_1117726413300025914Corn RhizosphereLGVVGLIVGFMWLVAAGSEEDGGPDTTFFFLFGSWYLMLRVMKALMNDPMSVLPAFGILIGSGGLVWLGIKMI
Ga0207687_10007202103300025927Miscanthus RhizosphereMHYIAPIPIMFGVIGAIIGILWLVAAGSDKDGGPDTGLFFLFGTWYLMIRVLKALTDDPMSVLPAFGILILSGGLIWVGVVML
Ga0207664_1013864433300025929Agricultural SoilCPECELAGSVSGTMHYVAPVPIIVGVIGVIAGLLWLIAAGSEEDGGPDTGLFFLFGFWYIGTRVLKALVTEPMSVLPAFGILLISAGLIWLGIVML
Ga0207644_1066613613300025931Switchgrass RhizosphereVHHIAPIPIIFGVIGAIVGLLWLVAAGSEEDGGPETGLFFVFGIWYIGLRVLKQLAREPMSVLPAFGILLGSAA
Ga0207661_1142753813300025944Corn RhizosphereMHFLAPFPIMFGVIGAIVGILWLVAAGSDKDGGPEPNLFFVFGMWYIFVRVLKALADEPMSVLPAFGILIVSAGLIWVGVVML
Ga0207667_1077506023300025949Corn RhizosphereMIGVLGVICGLLWLFAVGSEEDGGPDSALFFVFGMLYIGARVMKALVDEPMSVLPAFGILAGSAGLIWLGVWMW
Ga0207668_1124564513300025972Switchgrass RhizosphereMHHVAPIPIIFGVVGAIVGLLWLVAAGSDEDGGPETGLFYVFGFWYIGVRVLKQLASDPMSVLPALGILIVSGGLIWLGIVML
Ga0207677_1105876513300026023Miscanthus RhizosphereAVHYVAPIPIILGVVGAIVGLLWLVAAGSDDDGGPEKSLFFLFGAWYIGMRVVKALFRDPMSVLPAFGILLGSGALIWLGVIML
Ga0207677_1164080713300026023Miscanthus RhizosphereVHHIAPIPIIFGVIGAIVGLLWLVAAGSEEDGGPETGLFFVFGIWYIGLRVLKQLAREPMSVLPAFGILLGSAALIWLGIIML
Ga0207702_1225872713300026078Corn RhizosphereLSCINMHYLAPFPIMIGVLGVICGLLWLFAVGSEEDGGPDSALFFVFGMLYIGARVMKALVDEPMSVLPAFGILVGSAGLIWLGVWMW
Ga0207641_1021165723300026088Switchgrass RhizosphereMPGVAFRPMHYIAPIPIIAGVIGVIVAVMWLVAAGSENDGGPDTSLFFLFGWWYIGMRVLKELTRDPMSILPAFGILLGGAGLIWLGVVML
Ga0207698_1128274123300026142Corn RhizosphereMFGVIGAIVGILWLVAAGSDKDGGPEVGLFYLFGMWYIFLRVLKALSDEPMSVLPAFGILIVSAST
Ga0209131_118121233300026320Grasslands SoilMHYIAPIPIIFGVVGAIVGILWLVAAGSDKDGGPDTGLFFLFGMWYIVIRVLKALSSEPMSVLPAFGILLGSAALIWVGIVML
Ga0209450_10000036493300027885Freshwater Lake SedimentMHYIAPIPIILGVVGVIVGLFWLVAAGSDKDGGPSVGLFSIFGMWYVALRVMKQLASDPMSVLPAFGFLAGGAGLIALGVIMR
Ga0209486_1045628223300027886Agricultural SoilVHHVAPIPIIFGGIGVIVGLLWLVAAGSEEDGGPSTGLFFAFGSLYVVVRVVRQLFREPMSVLPAFGILLGGAALIWLGIVML
Ga0209382_1033057723300027909Populus RhizosphereMHYIAPIPIIIGVVGVVAGLLWLVAAGSDEDGGPDSGLFFLFGAMYIGMRVLKQLASDPMSVLPAFGILLGGAGLIWVGIVML
Ga0209382_1229376023300027909Populus RhizosphereMHHVAPIPIILGVIGAIAGLLWLVAVGSDEDGGPDSGLFFFFGASYIAMRVCKAMVREPMSVLPAFGILLVSAALIWVGIVML
Ga0209698_1060151123300027911WatershedsLSAARRTMHYIAPIPIIFGVIGVIVGLLWLVVAGSEGDGGPDLGLLFIFGRIYLLFRVSRLLFTEPMSVLPAFGILLVGAALIWLGILML
Ga0268266_1000453983300028379Switchgrass RhizosphereMPGVAFRLMHYIAPIPIIAGVIGVIVAVMWLVAAGSENDGGPDTSLFFLFGWWYIGMRVLKELTRDPMSILPAFGILLGGAGLIWLGVVML
Ga0268266_1025988723300028379Switchgrass RhizosphereMHYLAPFPIMIGGLGAICGLLWLVAAGSEDDGGPDSSMFSIFGMGYIMMRVMREFTRDPMSVLPAFGILAGSGVLIWLGWLMW
Ga0302301_107153123300028731PalsaMHHIAPIPIIFGVFGVVFGLLWLVAAGSDKDGGPETSLFFLFGMWYIGMRVLKALFNEPMSVLPAFGILLGSAALICLGVLML
Ga0302181_1024924223300030056PalsaMHHIAPIPIIFGVFGVVFGLLWLVAAGSDKDGGPETSLFFLFGMWYIGMRVLKALFNEPMSVLPAFGILLGSAALI
Ga0302309_1001665413300030687PalsaHHIAPIPIIFGVFGVVFGLLWLVAAGSDKDGGPETSLFFLFGMWYIGMRVLKALFNEPMSVLPAFGILLGSAALICLGVLML
Ga0299913_1081922213300031229SoilMHYVAPIPILIGIAGVIVGLLWLVAAGSDEDGGPSTGLFYAFGGLYIGIRVLKQLARDPMSVLPAFGLLLAGAALIWLGVVML
Ga0307408_10032873423300031548RhizosphereMHHIAPIPIIFGAIGVIVGLLWLVAAGSDEDGGPDTSLFFLFGAWYVGVRVMKALFREPMSVLPAFGILLGSAGLIWLGIVML
Ga0310686_107373526123300031708SoilMHYIAPIPIILGVVGVIAGFLWLVTAASEEGGSQISMPFVGRIFLLYRVLKALATDPMSVRPAFGILLVSAALIWVGVHML
Ga0307476_1000397653300031715Hardwood Forest SoilMHYIAPIPIILGVMGAIAGLLWLVAAGSEEDGGPQTGLFFSFGRIYLMFRVLKALFADPMSVLPAFGILLVSAALIWLGVIML
Ga0307405_1154267213300031731RhizosphereMHYVAPIPIIIGVVGVVAGLLWLVAAGSDEDGGPNSGLFFLFGAMYIATRVLKQLGRDPMSVLPAFGLLLGGAALIWLGVVML
Ga0308174_1012678513300031939SoilMHYLAPIPIIIGVFGAIMGLMWLVAAGADDDGGPEAGLFFLFGSWYIGLRVMKALVREPMSVLPAFGILIG
Ga0307409_10135557513300031995RhizosphereMKFFDPFACRKLISGTMHYVAPIPIILGVVGAIAGLVWLVAAGSDDDGGPDSGMFFLFGALYIGIRVLKALFNEPMSVLPAFGILILSAGLIWAGIVML
Ga0307409_10267403123300031995RhizosphereMHYVAPIPIILGVVGAIAGLLWLFAAGSDEDGGPDRGLFFVFGLLYIGLRVLKALVSDPMSVLPAFGLLVVSAALIWVGIAML
Ga0307414_1141774023300032004RhizosphereMLHFLAPFPIVIGVCGALVGLLWLVAAGSEEDGGPEPGLFYVFGLWYIALRVFKALLDEPMSVLPAFGILLGS
Ga0308173_1007832443300032074SoilMHYLAPIPIIIGVFGAIMGLMWLVAAGADDDGGPEAGLFFLFGSWYIGLRVMKALVREPMSVLPAFGILIGSAALIWLGIIML
Ga0308173_1137991513300032074SoilMHYLAPFPIIIGVVGAVAGVVWLVAAGSDEDGGPDSNLFFLFGAWYVAMRVLKALFNDPMSVLPAFGILVVSAALIWVGVAML
Ga0335074_10000556383300032895SoilMHYIAPIFIICGGIGAIAGLLWLVAAGSDNDGGPDTGLFFLFGVWYIGVRVLKALISEPMSVLPAFGILLVSAAMIWLGVVML
Ga0335074_1107566913300032895SoilGAQRGSTHAPPLLFSAMHDLAPLPTIIGLIGVLAGLLWLIAAGSANDGGPEPGLFFVFGIWYIALRVLKSLFSDPMSVLPALGILLGSAALIGLGVVMY
Ga0335073_1089018413300033134SoilMHYIAPIPIMFGVVGVVVGYLWLVAAGSEEDGGPQVGLFFIFGRIYVFFRVLKALITDPMSVLPAFGILLVSAALI
Ga0372946_0293075_378_6293300034384SoilMHYLAPFPIIVGVVGAIAGLLWLVAAGSEEDGGPDTGLFFLFGAWYIVMRVLKALASDPMSVLPAFGILLGSAGLIWLGIVML


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