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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F065369 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 127 |
| Average Sequence Length | 59 residues |
| Representative Sequence | MRDKISCASCKREINDDDACVSLRKENGTNYVFDSYVCAEIFQKLNHVKRNVSIREIIPMRIT |
| Number of Associated Samples | 87 |
| Number of Associated Scaffolds | 127 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 18.11 % |
| % of genes near scaffold ends (potentially truncated) | 37.80 % |
| % of genes from short scaffolds (< 2000 bps) | 91.34 % |
| Associated GOLD sequencing projects | 82 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.55 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (81.890 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.646 % of family members) |
| Environment Ontology (ENVO) | Unclassified (25.984 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (33.858 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.99% β-sheet: 23.08% Coil/Unstructured: 65.93% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.55 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 127 Family Scaffolds |
|---|---|---|
| PF00072 | Response_reg | 22.83 |
| PF00132 | Hexapep | 2.36 |
| PF02694 | UPF0060 | 0.79 |
| PF02826 | 2-Hacid_dh_C | 0.79 |
| PF00211 | Guanylate_cyc | 0.79 |
| PF04613 | LpxD | 0.79 |
| PF00702 | Hydrolase | 0.79 |
| COG ID | Name | Functional Category | % Frequency in 127 Family Scaffolds |
|---|---|---|---|
| COG1044 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase | Cell wall/membrane/envelope biogenesis [M] | 0.79 |
| COG1742 | Uncharacterized inner membrane protein YnfA, drug/metabolite transporter superfamily | General function prediction only [R] | 0.79 |
| COG2114 | Adenylate cyclase, class 3 | Signal transduction mechanisms [T] | 0.79 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 81.89 % |
| All Organisms | root | All Organisms | 18.11 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 34.65% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 8.66% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 7.09% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 7.09% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 4.72% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.15% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 3.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.94% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 3.94% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 2.36% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.36% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.36% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.36% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 2.36% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.57% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.57% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.57% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.79% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.79% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.79% |
| Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 0.79% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.79% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.79% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.79% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.79% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000787 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300004006 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005169 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPA | Environmental | Open in IMG/M |
| 3300005269 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil | Environmental | Open in IMG/M |
| 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
| 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
| 3300005888 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 | Environmental | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300018000 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex | Environmental | Open in IMG/M |
| 3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
| 3300018051 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1 | Environmental | Open in IMG/M |
| 3300018054 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1 | Environmental | Open in IMG/M |
| 3300018061 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1 | Environmental | Open in IMG/M |
| 3300018071 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1 | Environmental | Open in IMG/M |
| 3300018076 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex | Environmental | Open in IMG/M |
| 3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
| 3300018920 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS | Environmental | Open in IMG/M |
| 3300019869 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2 | Environmental | Open in IMG/M |
| 3300019875 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2 | Environmental | Open in IMG/M |
| 3300019878 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2 | Environmental | Open in IMG/M |
| 3300019879 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2 | Environmental | Open in IMG/M |
| 3300019881 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2 | Environmental | Open in IMG/M |
| 3300020006 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2 | Environmental | Open in IMG/M |
| 3300020015 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1 | Environmental | Open in IMG/M |
| 3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
| 3300021080 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo | Environmental | Open in IMG/M |
| 3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300025556 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300030830 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030902 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030903 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031091 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031847 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4 | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiDRAFT_07824082 | 3300000033 | Soil | MYMRDKISCTSCKREIDDDDACVSLRKEDGTNYVFDSFICAEIFQKLNHVRSNVFIREVIP* |
| JGI11643J11755_117670032 | 3300000787 | Soil | MRDKISCTSCKREIDDDDACVSLRKEDGTNYVFDSFICAEIFQKLNHVRSNVFIREVIP* |
| Ga0055453_100019934 | 3300004006 | Natural And Restored Wetlands | MGMGDKICASCNRKINDDGARVFLRKENGIDYVFDSYVCAEIFQKLNHIKRNVNNREMIPMRIT* |
| Ga0055453_100681292 | 3300004006 | Natural And Restored Wetlands | MRDKISCASCKREINDDDACVSLRKENGTNYVFDSYVCAEIFQKLNHVKRNVSIREIIPMRIT* |
| Ga0055453_101391911 | 3300004006 | Natural And Restored Wetlands | MINRIFCASCKREISDGDVCVYLKNKDGTNYVFDSYVCSEIFQKLNHVKRNVSIREVIP |
| Ga0055453_102191001 | 3300004006 | Natural And Restored Wetlands | MGDKMSCASCNRKINDDDAYVFLRKENGTNYVFDSYVCAEIFQKLNHVKCNVNIREVIPYVK* |
| Ga0062593_1001586461 | 3300004114 | Soil | MRDKISCDSCKREINDDDACVSLRKENGTNYVFDSYVCAAIFQKLNHVKRNVSIREVIPMRIT* |
| Ga0062593_1017450281 | 3300004114 | Soil | MYMRDKIPCASCKREIDDDDACVSLRKEDGTNYVFDSFICAEIFQKLNHVRSNVFIREVIS* |
| Ga0062590_1021171862 | 3300004157 | Soil | MYLHEKYISCASCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK* |
| Ga0063356_1061402691 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MCMRDKIYASCKREINDDDVCVSLRKENGTNYIFSSYVCAEIFQKLNHAKSNVSIGEVIPMRIT* |
| Ga0062595_1008141451 | 3300004479 | Soil | MRDKISCACKREIDDDDACVSLRKEDGTNYVFDSYICAEIFQTLNHVKRNVFIREVIP* |
| Ga0062595_1013785322 | 3300004479 | Soil | MRNNISCASCNRKIKDDDAYVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0062591_1001789903 | 3300004643 | Soil | MRNNISCASCNRKIEDDDACVYLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK* |
| Ga0062594_1007308443 | 3300005093 | Soil | MRDKIYASCKREINDDDVCVSLRKENGTNYIFSNYVCAEIFQKLNHAKSNVSIGEVIPMRIT* |
| Ga0062594_1007920053 | 3300005093 | Soil | MSCACCNRKINDDDACVSLRKENGTNYVFDSYVCAEIFQKLNHVKRNVSIREVIPMRIT* |
| Ga0062594_1014158622 | 3300005093 | Soil | MRDNMTCDSCNRKINEDDACVFLRKENGINYVFDSYVCAEIFQKLNHVKRNVNIREVIPYIK* |
| Ga0066810_100517971 | 3300005169 | Soil | MSCSSCKREITDDDACVTLRKEDGTDYMFDSYICTQIFQKLNHIKRNVFVREVIS* |
| Ga0065706_10047392 | 3300005269 | Switchgrass Rhizosphere | MRDKICASCKREINDDDVCVSLRKENGTNYIFDSYVCAEIFQKLNHVKRNVSIREVIPMRIT* |
| Ga0065704_108438071 | 3300005289 | Switchgrass Rhizosphere | MRDKMSYASCKREIDDDDTCVSLRKEDGTNYVSDSYKCAEIFQKLNHAKSNMFIREVIP* |
| Ga0065712_105184401 | 3300005290 | Miscanthus Rhizosphere | MRDKMSYAFCKREIDDDDTCVSLRKEDGTNYVSDSYKCAEISQKLNHVKSNMFIREVIP* |
| Ga0065715_100051782 | 3300005293 | Miscanthus Rhizosphere | MCMRDKMSYASCKREIDDDDTCVSLRKEDGTNYVSDSYKCAEISQKLNHVKSNMFIREVIP* |
| Ga0065715_100096751 | 3300005293 | Miscanthus Rhizosphere | MRNNXSCASCNRKIKXDDACVFLTKENGTKYXFDSYVCAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0070683_1021615792 | 3300005329 | Corn Rhizosphere | LYIIFSGYICMGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNVNIREIIPMRIT* |
| Ga0068869_1008364142 | 3300005334 | Miscanthus Rhizosphere | MRDKMSYASCKREIDDDDTCVSLRKEDGTNYVSDSYKCAEISQKLNHVKSNMFIREVIP* |
| Ga0070691_106899511 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MRDKISCASCKREIDDDDTCVSLRKEDGTNYVFDSYICVEIFQKLNHVKRNVFIREVIP* |
| Ga0070694_1018048031 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MRDKISCVSCKREIDDEDTCVSLRKEDGTNYVFDSYICAEIFQKLNHVKRNV |
| Ga0070708_1014376382 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MSYASCKREIDDDDTCVSLRKEDGTNYVSDSYKCAEISQKLNHVKSNMFIREVIP* |
| Ga0070699_1002134702 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MCMRDKISCAPCKREIDDDDTCVSLRKEEDGTNYVFDSYICAEIFQKLNHMKSNVFIREVIP* |
| Ga0070697_1000455151 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MRNNMSCASCNRKIKDDDACVFLTKENGTKYIFDSYVCAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0068853_1021584201 | 3300005539 | Corn Rhizosphere | MSCASCNRKIEDDDACVYLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK* |
| Ga0070695_1013734271 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MCMRDKIISCAPCKREIDDDDTCVSLRKEEDGTNYVFDSYICAEIFQKLIMKRNVFIREVIP* |
| Ga0070696_1006130021 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MCMRDKISCASCKREIDDDDTCVSLRKEEDGTNYVFDSYICAEIFQKLNHVKSNVFIREVIP* |
| Ga0070693_1014204782 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MSCASCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0070702_1008592041 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MRDKIVCGSCKREINNEDACVSLRKENGTYYVFDSYVCAEIFQKLNHVKRNVSIREVIPIRIT* |
| Ga0070702_1016070121 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNVNI |
| Ga0068852_1022669842 | 3300005616 | Corn Rhizosphere | MSYASCKREIDDDDTCVSLRKEDGTNYVADSYKCAEISQKLNHVKSNMFIREVI |
| Ga0068870_109998331 | 3300005840 | Miscanthus Rhizosphere | MSYASCKREIDDDDTCVSLRKEDGTNYVSDSYKCAEISQKLNHVKSNMFIRE |
| Ga0075289_10308511 | 3300005888 | Rice Paddy Soil | MRNNISCGSCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK* |
| Ga0111539_111515032 | 3300009094 | Populus Rhizosphere | MGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNVNIREIIPMRRT* |
| Ga0111539_124351002 | 3300009094 | Populus Rhizosphere | ICMTDKICASCNRKINDDDACVFLRKENGRNYVFDSYVCAEIFQKLNHIKRNVNLREIIPMRTT* |
| Ga0111538_103666342 | 3300009156 | Populus Rhizosphere | MGDKICACCNRKINDDDARVLLRRENETNYVFDSYICTEIFQKLNHVKRNVNIREIIPMRRT* |
| Ga0134125_111778731 | 3300010371 | Terrestrial Soil | MRDEIVCGSCKREINNEDACVSLRKENGTNYVFDSYVCAEIFQKLNHVKRNVSIREVIPMRIT* |
| Ga0134128_101970792 | 3300010373 | Terrestrial Soil | MCMRDKISCASCKREIDDDDTCVSLRKEEDGTNYVFNSYICAEFFQKLNHVKSNVFIREVIP* |
| Ga0134128_112807471 | 3300010373 | Terrestrial Soil | MRNNISCASCNRKIKDDDACFFLTKENEKKYIFDSYVCAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0134128_117001661 | 3300010373 | Terrestrial Soil | MGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNVNIREIIPMRITRCEI* |
| Ga0134128_121247732 | 3300010373 | Terrestrial Soil | MRNNISCASCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVFVK* |
| Ga0134127_122647961 | 3300010399 | Terrestrial Soil | YICMRNCKICASCNRKLNDDGACVFLRNENGTNYVFDSYVCAEIFQKLNHIERNVNIREIIPMRIT* |
| Ga0105246_100947224 | 3300011119 | Miscanthus Rhizosphere | MTDKICASCNRKINDDGACVFLRKENGRNYVFDSYVCAEIFQKLNHIKRNVNLREIIPMRTT* |
| Ga0105246_106830002 | 3300011119 | Miscanthus Rhizosphere | MCMRDKISCAPCKREIDDDDTCVSLRKEEDGTNYVFDSYICAEIFQKLIMKRNVFIREVIP* |
| Ga0105246_111116802 | 3300011119 | Miscanthus Rhizosphere | MRNNISCASCNRKIKDDDACVFLTKENGTKYIFDSYVCAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0105246_113295301 | 3300011119 | Miscanthus Rhizosphere | MGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNVNIREIIPMRIT* |
| Ga0164300_100380523 | 3300012951 | Soil | MRNDKSCASCNRKIKDDDACVFLTKENGTKYIFDSYVCAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0164300_100951862 | 3300012951 | Soil | MTCASCDRKIKDDDACVFLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREVVPFVK* |
| Ga0164300_105365341 | 3300012951 | Soil | INDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNANIREIIPMRIT* |
| Ga0164300_105614871 | 3300012951 | Soil | MCMRDKISCASCKREIDDDDTCVSLRKEEDGTNYVFDSYKCAEIFQKLNHVKSNVFIREVIP* |
| Ga0164298_103042621 | 3300012955 | Soil | MRDRIFCASCKREIKDDDARVSLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREVVPFVK* |
| Ga0164303_100082255 | 3300012957 | Soil | MRDNVTCASCNRKIKDDDACVFLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREVVPFVK* |
| Ga0164303_111137912 | 3300012957 | Soil | MSCASCNRKIEDDDACVYLTKENGTKYVFDSYICAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0164299_102302541 | 3300012958 | Soil | MCMIDKISCASCKREIDDDDTCVSLRKEEDGTNYVFDSYKCAEIFQKLNHVKSNVFIREVIP* |
| Ga0164299_109441351 | 3300012958 | Soil | VFLYNILKFIIYMRDNMTCASCDRKIKDDDACVFLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREVVPFVK* |
| Ga0164301_103998991 | 3300012960 | Soil | MYMRDKISCACKREIDDDDACVSLRKEDGTNYVFDSFMCAEIFQKLTLVRSNMFIREVIP |
| Ga0164301_109483641 | 3300012960 | Soil | NCASCNRKINDDGACVFLRKENGTNYFFDSYVCAEIFQKLNHVKLNVSIREIVPMMIT* |
| Ga0164302_101543832 | 3300012961 | Soil | MYMRDKISCACKREIDDDDACVSLRKEDGTNYVFDSFICAEIFQKLNYVRSNVFIREVIP |
| Ga0164308_100756452 | 3300012985 | Soil | MCMRDKISCASCKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQTLNHVKRNVFIREVIP* |
| Ga0164308_122750191 | 3300012985 | Soil | MRDNITCASCNRKIKDDDACVFLRKENGTNYVFDSYVCAEIFQKLNHVKRNVSIREVIPMRIT* |
| Ga0164304_101501342 | 3300012986 | Soil | MRDKISCASCKREIDDDDTCVSLRKEEDGTNYVFDSYKCAEIFQKLNHVKSNVFIREVTMMVIG* |
| Ga0164305_101928842 | 3300012989 | Soil | MCMRDKISCASCKREIDYDDTCVSLRKEEDGTNYVFDSYKCAEIFQKLNHVKSYVFIREVIP* |
| Ga0157378_101546921 | 3300013297 | Miscanthus Rhizosphere | MRDKIFCASCKREIKDDDARVSLRKENGTYYVFDSNVCAEIFQKLNHVKRNVSIREVIPIRIT* |
| Ga0163162_133026322 | 3300013306 | Switchgrass Rhizosphere | MRNNISCASCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK* |
| Ga0173483_102182811 | 3300015077 | Soil | MYMRDKISCTSCKREIDDDDACVSLRKEDGTNYVFDSYICAEIFQKLNHVRSNVFIREVIP* |
| Ga0132258_123076894 | 3300015371 | Arabidopsis Rhizosphere | MSCASCNRKIKDDDACVFLTKENGTKYIFDSYVCAEIFQTLNHVKRNVNIREVVPFVK* |
| Ga0132256_1012262711 | 3300015372 | Arabidopsis Rhizosphere | MGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNANIREIIPMRIT* |
| Ga0132256_1028671011 | 3300015372 | Arabidopsis Rhizosphere | MRDKISCAPCKREIDDDDTCVSLRKEEDGTNYVFDSYICAEIFQKLNHEAQCVHSRGNTMMVIG* |
| Ga0132256_1039174201 | 3300015372 | Arabidopsis Rhizosphere | MGDRMLCATSNRKIDDEGACVYLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREVIPYVR* |
| Ga0132257_1024363001 | 3300015373 | Arabidopsis Rhizosphere | MRDKIFCASCKREIKDDDARVSLRKENGTNYVFDSYVCAEIFQKLNHVKRNVSIREVVPMRIT* |
| Ga0132255_1019918381 | 3300015374 | Arabidopsis Rhizosphere | MRDKISCASCKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQKLNHVKRNV |
| Ga0132255_1038259232 | 3300015374 | Arabidopsis Rhizosphere | ALRVLYIIFSGYICMGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNVNIREIIPMRIT* |
| Ga0132255_1052466081 | 3300015374 | Arabidopsis Rhizosphere | MRDKIFCASCKREINDDDACVSLRKENGTDYVFDSYVCAEIFQKLNHVKRNVSIREVIPIRIT* |
| Ga0184604_101298762 | 3300018000 | Groundwater Sediment | MRNNISCASCNRKIKDDDAYVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK |
| Ga0184608_100521963 | 3300018028 | Groundwater Sediment | MRNNISCASCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHAKRNVNIREIVPFVK |
| Ga0184620_100585093 | 3300018051 | Groundwater Sediment | CVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK |
| Ga0184620_102189732 | 3300018051 | Groundwater Sediment | MCMRDKISCASCKREIDDDDTCVYLRNEDGTNYVFDSYICAEIFQKLNHVKRNAFIREVIPRW |
| Ga0184621_101644672 | 3300018054 | Groundwater Sediment | MRDSISCASCKREIDQDDAVVSLRKENGTKYVFDSYVCAEIYQKLNHVKRNVSI |
| Ga0184619_100154163 | 3300018061 | Groundwater Sediment | MFSYYMCMRDKISSCKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQTLNHVKRNVFIREVIP |
| Ga0184618_101248842 | 3300018071 | Groundwater Sediment | MCMRDKISCASCKREIDDDDTCVYLRNEDGTNYVFDSYICAEIFQKLNHVKRNVFIREVIPRW |
| Ga0184609_100461874 | 3300018076 | Groundwater Sediment | MSCASCKREINDDDACVSLRKENGTNYVFDSYVCAEIFQKLNHIKRNVNIREIIPMRVT |
| Ga0184609_100979084 | 3300018076 | Groundwater Sediment | KDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK |
| Ga0190268_119783202 | 3300018466 | Soil | CMRDKICASCNRKINDDDACVSLRKENGTNYVFDSYVCAEIFQKLNHVKSNVNIREIIPMRIT |
| Ga0190273_114615881 | 3300018920 | Soil | MRDNMTCASCNRKINEDDACVFLRKENGTNYVFDSYVCAEIFQKLNHLKSNVSIREIIPMRITR |
| Ga0193705_10975781 | 3300019869 | Soil | MRDKICASCKGEINDDDVCVSLRKENGTNYIFDSYVCAEIFQKLNHVKRNVSIRE |
| Ga0193701_10106935 | 3300019875 | Soil | MRNNISCASCNRKIEDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK |
| Ga0193715_10498003 | 3300019878 | Soil | DDDACVFLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREVVPFVK |
| Ga0193715_11118971 | 3300019878 | Soil | VVAKMLCASCNRKIDDDGACVFLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREVVP |
| Ga0193723_10397291 | 3300019879 | Soil | MFSYYMCMRDKISCTSCKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQTLNHVKRKVFIREVI |
| Ga0193707_10590441 | 3300019881 | Soil | MVAKMLCACCNRKIDDDGACVFLRKENGTNYVFDSYVCAEIFQTLNHVKRNVNIREVVP |
| Ga0193707_10887011 | 3300019881 | Soil | MCMRDKICCASCKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQKLNNVKRNVFIREVI |
| Ga0193735_10613061 | 3300020006 | Soil | MFSYYMCMRDKISCTSCKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQMLNHVKR |
| Ga0193734_10334142 | 3300020015 | Soil | CKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQTLNHVKRNVFIREVIP |
| Ga0193734_10468281 | 3300020015 | Soil | MFSYYMCMRDKISCTSCKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQTLNHVKRKVFIRE |
| Ga0210381_104084481 | 3300021078 | Groundwater Sediment | MRNNISCASCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK |
| Ga0210382_105559821 | 3300021080 | Groundwater Sediment | MCMRDKISCTSCKREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQKLNNVKRNVFIREVIPXR |
| Ga0222625_16713531 | 3300022195 | Groundwater Sediment | MSCASCNRKIKGDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK |
| Ga0222622_107795842 | 3300022756 | Groundwater Sediment | DACVSLRKEDGTNYVFDSYVCSAIFQKLNHVKRNMSIREVIPMRIT |
| Ga0210120_10149611 | 3300025556 | Natural And Restored Wetlands | MGMGDKICASCNRKINDDGARVFLRKENGIDYVFDSYVCAEIFQKLNHIKRNVNNREMIPMRIT |
| Ga0207643_106741001 | 3300025908 | Miscanthus Rhizosphere | MSYASCKREIDDDDTCVSLRKEDGTNYVSDSYKCAEISQKLNHVKRNVNIREIIPMRIT |
| Ga0207684_107850542 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MSCASCNRKIKDDDACVFLTKENGTKYIFDSYVCAEIFQTLNHVKRNVNIREVVPFVK |
| Ga0207661_116492761 | 3300025944 | Corn Rhizosphere | MGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNVNIREIIPMRIT |
| Ga0308205_10515542 | 3300030830 | Soil | ASCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK |
| Ga0308202_10527221 | 3300030902 | Soil | DDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK |
| Ga0308202_11198052 | 3300030902 | Soil | LCASCNRKIDDDGACVFLRKENGTNYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK |
| Ga0308206_10358131 | 3300030903 | Soil | TKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK |
| Ga0308206_11420761 | 3300030903 | Soil | SCASCNRKIDDDGACVFLRKENGTNYVFDSYVCAEIFQTLNHVKRNVNIREVIPYVK |
| Ga0308189_100869133 | 3300031058 | Soil | ASCNRKIKDDDACVFLRKENGTNYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK |
| Ga0308201_101710711 | 3300031091 | Soil | TCASCKREIDDDDACVSLRKEDGTNYVFDSYICAEIFQKLNHVKRNVFIREVIP |
| Ga0308201_103134161 | 3300031091 | Soil | CASCNRKIKEDDACVFLTKENGTKYVFDSYVCAEIFQTLNHAKRNVNIREVVPFVK |
| Ga0308201_103956092 | 3300031091 | Soil | KREIDDDDTCVSLRKEDGTNYVFDSYICAEIFQKLNHVKRNVFIREVIP |
| Ga0308204_100900321 | 3300031092 | Soil | SCASCNRKIKDDDVCVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREIVPFVK |
| Ga0308204_101961542 | 3300031092 | Soil | KIDDDGACVFLRKENGTNYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK |
| Ga0308204_101992442 | 3300031092 | Soil | CASCNRKIKDDDACVFLTKENGTKYVFDSYVCAEIFQTLNHVKRNVNIREVVPFVK |
| Ga0308204_102439311 | 3300031092 | Soil | DDDACVFLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREIIPMRIT |
| Ga0308204_103247601 | 3300031092 | Soil | CASCKREIDDEDTCVSLRKEDGTNYVFDSYICAEIFQKLNNVKRNVIIREVIP |
| Ga0308187_103944961 | 3300031114 | Soil | KDDDACVFLRKENGTNYVFDSYVCAEIFQKLNHVKRNVNIREIVPFVK |
| Ga0310887_107477472 | 3300031547 | Soil | NRKINEDDACVFLRKENGINYVFDSYVCAEIFQKLNHVKRNVNIREVIPYIK |
| Ga0310907_102968722 | 3300031847 | Soil | MGDKICACCNRKINDDGARVFLRRENGTNYVFDSYICTEIFQKLNHVKRNVNIREIIPMRITRCEI |
| Ga0310904_105801322 | 3300031854 | Soil | MTDKICASCNRKINDDGACVYLRKENGRKYVFDSYVCAEIFQKLNHIKRNVN |
| Ga0310892_107503721 | 3300031858 | Soil | MRNCKICASCNRKLNDDGACVFLRNENGTNYVFDSYVCAEIFQKLDHIERNVNIREIIPMRIT |
| Ga0310906_109403961 | 3300032013 | Soil | ICMRNCKICASCNRKLNDDGACVFLINENGTNYVFDSYVCAEIFQKLDHIERNVNIREIIPMRIT |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |