NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F065304

Metagenome Family F065304

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065304
Family Type Metagenome
Number of Sequences 127
Average Sequence Length 42 residues
Representative Sequence MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Number of Associated Samples 73
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 92.13 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (69.291 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(60.630 % of family members)
Environment Ontology (ENVO) Unclassified
(86.614 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(60.630 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.
1Ga0066388_1082297391
2Ga0066903_1006905825
3Ga0066903_1009488203
4Ga0066903_1036669231
5Ga0066903_1042777182
6Ga0066903_1069410351
7Ga0066903_1075090021
8Ga0066903_1075578611
9Ga0066903_1076741032
10Ga0066903_1091148782
11Ga0126370_122821661
12Ga0126379_113096082
13Ga0126381_1001649064
14Ga0126383_125283772
15Ga0126383_135207181
16Ga0124850_11396961
17Ga0182036_107483061
18Ga0182033_105228642
19Ga0182033_108354421
20Ga0182035_119561763
21Ga0182035_120384432
22Ga0182032_109875503
23Ga0182032_117225431
24Ga0182039_100504197
25Ga0182039_100673426
26Ga0182039_104222331
27Ga0182039_112205212
28Ga0182039_112513451
29Ga0182039_116223532
30Ga0182038_100132451
31Ga0182038_111659691
32Ga0126371_114134652
33Ga0318516_105251311
34Ga0318534_102170833
35Ga0318534_106964712
36Ga0318534_107295902
37Ga0318534_107533661
38Ga0318541_101600934
39Ga0318541_103726482
40Ga0318541_105207821
41Ga0318538_101730201
42Ga0318538_102575731
43Ga0318528_100486401
44Ga0318528_101128032
45Ga0318528_102594682
46Ga0318528_103441651
47Ga0310915_108105222
48Ga0318555_102825752
49Ga0318555_105959162
50Ga0318542_101250013
51Ga0318542_107215361
52Ga0318561_102186262
53Ga0318561_107320641
54Ga0318574_105899491
55Ga0318560_105206681
56Ga0318496_103228911
57Ga0318496_107948501
58Ga0306917_102708983
59Ga0306917_105745391
60Ga0306917_112771591
61Ga0318493_107363291
62Ga0318500_102213312
63Ga0318500_103050203
64Ga0306918_100361251
65Ga0318492_102212701
66Ga0318537_101820712
67Ga0318535_101195301
68Ga0318535_102589942
69Ga0318535_104979551
70Ga0318509_103131631
71Ga0318521_100577841
72Ga0318546_106144921
73Ga0318546_107329731
74Ga0318546_112457521
75Ga0318543_100480971
76Ga0318543_104510231
77Ga0318566_106742611
78Ga0318547_100411275
79Ga0318529_101414621
80Ga0318548_100642852
81Ga0318557_101275311
82Ga0318497_101023643
83Ga0318497_103976821
84Ga0318497_105417222
85Ga0318567_102983671
86Ga0318567_104904391
87Ga0318564_105427432
88Ga0318499_101120261
89Ga0318511_103280432
90Ga0318512_102255291
91Ga0306919_106615551
92Ga0306925_104765121
93Ga0306925_110511741
94Ga0306925_121713611
95Ga0318551_102823223
96Ga0318520_101927332
97Ga0306923_105402971
98Ga0306923_121444471
99Ga0306921_101528445
100Ga0306921_106419541
101Ga0306921_106896193
102Ga0306921_107330201
103Ga0306921_107725433
104Ga0310912_108276581
105Ga0310916_106912031
106Ga0310913_100989274
107Ga0310913_107142822
108Ga0310909_112797322
109Ga0310909_114749641
110Ga0306922_113151061
111Ga0310911_107881771
112Ga0318559_104747391
113Ga0318559_105298601
114Ga0318556_101549241
115Ga0318558_101514761
116Ga0318532_102181733
117Ga0318506_105161061
118Ga0318570_103321241
119Ga0318514_102869141
120Ga0318514_105340261
121Ga0306924_111946351
122Ga0318577_100372311
123Ga0318540_103719283
124Ga0318540_105999602
125Ga0306920_1017720313
126Ga0310914_106005512
127Ga0318519_107090702
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.95%    β-sheet: 0.00%    Coil/Unstructured: 86.05%
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510152025303540MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
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Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
30.7%69.3%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Tropical Forest Soil
Soil
Soil
Tropical Forest Soil
4.7%60.6%26.0%8.7%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066388_10822973913300005332Tropical Forest SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0066903_10069058253300005764Tropical Forest SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRS
Ga0066903_10094882033300005764Tropical Forest SoilMALNAKTNPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLA
Ga0066903_10366692313300005764Tropical Forest SoilMALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLA
Ga0066903_10427771823300005764Tropical Forest SoilMSLNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0066903_10694103513300005764Tropical Forest SoilMALNAKANPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLALA
Ga0066903_10750900213300005764Tropical Forest SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLA
Ga0066903_10755786113300005764Tropical Forest SoilMALSAKANPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLA
Ga0066903_10767410323300005764Tropical Forest SoilMALNAKANANYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLALA
Ga0066903_10911487823300005764Tropical Forest SoilMALNAKTDPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDF
Ga0126370_1228216613300010358Tropical Forest SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0126379_1130960823300010366Tropical Forest SoilMALNAKSDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0126381_10016490643300010376Tropical Forest SoilMALNAKTDPNYVPKRINGKFAPGYSGNPGGSLEATRRSFN
Ga0126383_1252837723300010398Tropical Forest SoilMALNAKANPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLAL
Ga0126383_1352071813300010398Tropical Forest SoilMALNAKTDPNYVPQRINGKFAPGSSGNPGGSLEATRRSFNKDFLLAL
Ga0124850_113969613300010863Tropical Forest SoilMALNAKANPNYVPKRINGKFAPGYSGNPGGSLEATR
Ga0182036_1074830613300016270SoilMALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0182033_1052286423300016319SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0182033_1083544213300016319SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLALAA
Ga0182035_1195617633300016341SoilMALNAKIDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0182035_1203844323300016341SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAADF
Ga0182032_1098755033300016357SoilMALNAKTDPNYVPKRINGKFAPGWLGNPGGSLEATRRSFNKDFLL
Ga0182032_1172254313300016357SoilMALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0182039_1005041973300016422SoilMALNAKTDPNYLPKRINGKFAPGWSGNPGGSLEATRRSF
Ga0182039_1006734263300016422SoilMALNAKTDPNYVPKRISGKFAPGYSGNPGGSLEATRRSFNRDFLLALAA
Ga0182039_1042223313300016422SoilMALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0182039_1122052123300016422SoilMTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSF
Ga0182039_1125134513300016422SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0182039_1162235323300016422SoilMALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAAD
Ga0182038_1001324513300016445SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0182038_1116596913300016445SoilMALNAKANPNYVAKRINGKFAPGYSGNPGGSLEATRRSFNKDF
Ga0126371_1141346523300021560Tropical Forest SoilMALNAKTAPNYIPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318516_1052513113300031543SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318534_1021708333300031544SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318534_1069647123300031544SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318534_1072959023300031544SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLAVPWRLRVGRS
Ga0318534_1075336613300031544SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSF
Ga0318541_1016009343300031545SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRR
Ga0318541_1037264823300031545SoilMTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318541_1052078213300031545SoilMALNAKANPNYVAKRINGKFAPGWSGNPGGSLEATRRSF
Ga0318538_1017302013300031546SoilMALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0318538_1025757313300031546SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0318528_1004864013300031561SoilMALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318528_1011280323300031561SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318528_1025946823300031561SoilMALNAKTDPNYVPERINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318528_1034416513300031561SoilMALNAKTDPNYVPKRIRGKFAAGWSGHPGGSLEATRR
Ga0310915_1081052223300031573SoilMALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0318555_1028257523300031640SoilMTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0318555_1059591623300031640SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATR
Ga0318542_1012500133300031668SoilMALNAKTDPTYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318542_1072153613300031668SoilMTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0318561_1021862623300031679SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0318561_1073206413300031679SoilMALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0318574_1058994913300031680SoilMTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318560_1052066813300031682SoilMALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEAT
Ga0318496_1032289113300031713SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEAT
Ga0318496_1079485013300031713SoilMALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRRSFNK
Ga0306917_1027089833300031719SoilMALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSCNRDYM
Ga0306917_1057453913300031719SoilMALNAKANPNYVAKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0306917_1127715913300031719SoilMALNAKTDPNYLPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0318493_1073632913300031723SoilMALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRR
Ga0318500_1022133123300031724SoilMALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATR
Ga0318500_1030502033300031724SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0306918_1003612513300031744SoilMALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318492_1022127013300031748SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLAVPWR
Ga0318537_1018207123300031763SoilMALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318535_1011953013300031764SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318535_1025899423300031764SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFL
Ga0318535_1049795513300031764SoilMALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRRSF
Ga0318509_1031316313300031768SoilMALNAKTDPDYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318521_1005778413300031770SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLALA
Ga0318546_1061449213300031771SoilMALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0318546_1073297313300031771SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNR
Ga0318546_1124575213300031771SoilMALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLAL
Ga0318543_1004809713300031777SoilMALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0318543_1045102313300031777SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0318566_1067426113300031779SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0318547_1004112753300031781SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEAT
Ga0318529_1014146213300031792SoilMALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRS
Ga0318548_1006428523300031793SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLA
Ga0318557_1012753113300031795SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318497_1010236433300031805SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318497_1039768213300031805SoilMALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSF
Ga0318497_1054172223300031805SoilMTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEAT
Ga0318567_1029836713300031821SoilMALNAKTDPNYVPKRINGRFAPGWSGNPDGSLEAT
Ga0318567_1049043913300031821SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLL
Ga0318564_1054274323300031831SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLALAAD
Ga0318499_1011202613300031832SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLA
Ga0318511_1032804323300031845SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAAD
Ga0318512_1022552913300031846SoilMALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRRSFNKD
Ga0306919_1066155513300031879SoilMALNAKTNPNYVAKRINGKFAPGWSGNPGGSLEATRRSFNRDF
Ga0306925_1047651213300031890SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0306925_1105117413300031890SoilMALNAKTNPNYVAKRINGKFAPGWSGNPGGSLEATR
Ga0306925_1217136113300031890SoilMSLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0318551_1028232233300031896SoilMALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318520_1019273323300031897SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDF
Ga0306923_1054029713300031910SoilMALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0306923_1214444713300031910SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0306921_1015284453300031912SoilMALNAKTDPTYSPKRIKFAPGWSGNPGGSLEATRRSFNKDFLLALA
Ga0306921_1064195413300031912SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLAL
Ga0306921_1068961933300031912SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0306921_1073302013300031912SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0306921_1077254333300031912SoilMALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLA
Ga0310912_1082765813300031941SoilMALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0310916_1069120313300031942SoilMALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAADF
Ga0310913_1009892743300031945SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0310913_1071428223300031945SoilMALNAKANPNYVPKRINGKFAPGWSGNPGGSLEAMRRSFNK
Ga0310909_1127973223300031947SoilMSLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0310909_1147496413300031947SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0306922_1131510613300032001SoilMALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0310911_1078817713300032035SoilMALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEAT
Ga0318559_1047473913300032039SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKGF
Ga0318559_1052986013300032039SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNRDF
Ga0318556_1015492413300032043SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALA
Ga0318558_1015147613300032044SoilMTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318532_1021817333300032051SoilMALNAKTDPNYVPKRISGKFAPGYSGNPGGSLEATRRSFN
Ga0318506_1051610613300032052SoilMALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0318570_1033212413300032054SoilMALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRRS
Ga0318514_1028691413300032066SoilMALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318514_1053402613300032066SoilMTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0306924_1119463513300032076SoilMALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318577_1003723113300032091SoilMALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFYR
Ga0318540_1037192833300032094SoilMALNAKTDPNYVPKRISGKFAPGYSGNPGGSLEATRRSFNR
Ga0318540_1059996023300032094SoilMALNAKANPNYVAKRINGKFAPGWSGNPGGSLEATRR
Ga0306920_10177203133300032261SoilMALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0310914_1060055123300033289SoilMALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318519_1070907023300033290SoilMALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNKDF


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