Basic Information | |
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Family ID | F065231 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 128 |
Average Sequence Length | 41 residues |
Representative Sequence | MMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Number of Associated Samples | 91 |
Number of Associated Scaffolds | 128 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 1.56 % |
% of genes near scaffold ends (potentially truncated) | 96.09 % |
% of genes from short scaffolds (< 2000 bps) | 92.19 % |
Associated GOLD sequencing projects | 77 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (55.469 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (39.844 % of family members) |
Environment Ontology (ENVO) | Unclassified (52.344 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (71.094 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 65.00% β-sheet: 0.00% Coil/Unstructured: 35.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms unclassified Hyphomonas Unclassified |
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Visualization |
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Sediment Freshwater Deep Subsurface Marine Sediment Microbial Mat Aqueous Seawater Freshwater To Marine Saline Gradient Marine Salt Marsh Natural And Restored Wetlands Marine Estuarine Water Pelagic Marine Marine Sediment Pond Water Water Saline Water And Sediment Saline Water And Sediment Saline Water And Sediment Hypersaline Lake Sediment Sediment Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOWin2010_101083391 | 3300000117 | Marine | RVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH* |
DelMOWin2010_101809713 | 3300000117 | Marine | NIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
JGI11705J14877_101742163 | 3300001419 | Saline Water And Sediment | RVDGMMNNRVNIERLQMDVERLRVDTEKLKDSVRANIGKLNGNH* |
JGI11705J14877_101772511 | 3300001419 | Saline Water And Sediment | NNRVNIERLQTDVERLRVDVEKLKDSVRANIGKLNGNH* |
JGI11705J14877_101896873 | 3300001419 | Saline Water And Sediment | IRVDGMMNNRVNIERLQMDVERLRVDTEKLKDSVRANIGKLNGDH* |
GOS2229_10039094 | 3300001963 | Marine | MNNKVNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0069001_101429833 | 3300005215 | Natural And Restored Wetlands | MNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH* |
Ga0074648_100791514 | 3300005512 | Saline Water And Sediment | RVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNSH* |
Ga0074648_10709731 | 3300005512 | Saline Water And Sediment | GMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH* |
Ga0074648_11197352 | 3300005512 | Saline Water And Sediment | MNNKVNINRLQMDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0074647_10087141 | 3300005611 | Saline Water And Sediment | GMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0076921_1372441 | 3300005733 | Marine | GLEKLTLRVDGMMNNKVNINRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0076925_10367863 | 3300005748 | Marine | EGLEKLTLRVDGMMNNKVNINRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0075474_101311764 | 3300006025 | Aqueous | VDGMMNNRVNIERLQMDVNKLQIDVEKLKDSVRANIGKLNGNH* |
Ga0075478_100735161 | 3300006026 | Aqueous | KVNIERLQKDFERLYIDVEKLKDSVRSNIGKLNGDH* |
Ga0075462_101060655 | 3300006027 | Aqueous | DGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH* |
Ga0075462_101118021 | 3300006027 | Aqueous | EQNMTNKVNIERLQSDVERLRIDVEKLKDSVRANIGKLNGNH* |
Ga0075462_101240594 | 3300006027 | Aqueous | GMMNNRVNIERLQMDVNKLQIDVEKLKDSVRANIGKLNGNH* |
Ga0075462_102588182 | 3300006027 | Aqueous | MNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0075503_10052731 | 3300006400 | Aqueous | NKVNIERLQSDVERLRIDVEKLKDSVRANLGKLNGNH* |
Ga0075511_17821531 | 3300006402 | Aqueous | RVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH* |
Ga0075461_100577631 | 3300006637 | Aqueous | EGLEKLTIRVDDMMNNKVNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0075461_100952231 | 3300006637 | Aqueous | MMNNRVNIERLQTDVERLRVDVEKLKDSVRANIGKLNGNH* |
Ga0070749_107643861 | 3300006802 | Aqueous | DGMMNYRVIIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH* |
Ga0070749_107850221 | 3300006802 | Aqueous | NIERLQTDVERLRIDVEKLKDSVRANLGKLNGNSH* |
Ga0070754_101546391 | 3300006810 | Aqueous | VDGMMNNRVNIERLQMDVERLRVDTEKLKDSVRANIGKLNGNH* |
Ga0070754_103149031 | 3300006810 | Aqueous | VNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0075476_101405515 | 3300006867 | Aqueous | MMNNRVNIERLQMDVNKLQIDVEKLKDSVRANIGKLNGNH* |
Ga0070750_103051971 | 3300006916 | Aqueous | MTNKVNIERLQQDVERLRIDVEKLKDSVRANIGKLNGTH* |
Ga0070750_104892511 | 3300006916 | Aqueous | LTIRVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH* |
Ga0070746_104593573 | 3300006919 | Aqueous | DMMNNKVNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0075460_102815771 | 3300007234 | Aqueous | RVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRTNIGKLNGNH* |
Ga0075460_102858231 | 3300007234 | Aqueous | MMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0075463_102145753 | 3300007236 | Aqueous | GLEKLTIRVDDMMNNKVNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGTH* |
Ga0070752_12521143 | 3300007345 | Aqueous | LEKLTVRVDDMMNNKVNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0070752_13949453 | 3300007345 | Aqueous | NKVNIERLQQDVERLRIDVEKLKDSVRANIGKLNGTH* |
Ga0070753_12799561 | 3300007346 | Aqueous | RVNIERLQTDVERLRIDVEKLKDSVRANLGKLNGNSH* |
Ga0099851_11133971 | 3300007538 | Aqueous | TVRVDGMMNNRVNIERLQMDVNKLQIDVEKLKDSVRANIGKLNGNH* |
Ga0099851_11422501 | 3300007538 | Aqueous | VNIERLQTDVERLRIDVEKLKDSVRANLGKLNGNSH* |
Ga0099851_12366791 | 3300007538 | Aqueous | MMNNRVNIERLQTDVERLRVDVEKLKDSVRANIGKLNGDH* |
Ga0099849_12422743 | 3300007539 | Aqueous | MNNRVNIERLQTDVERLRVDVEKLKDSVRANIGKLNGNH* |
Ga0099849_12783711 | 3300007539 | Aqueous | IRVDGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGAH* |
Ga0099846_13372943 | 3300007542 | Aqueous | VRVDGMMNNRVNIERLQMDVNKLQIDVEKLKDSVRANIGKLNGNH* |
Ga0102945_10803063 | 3300007609 | Pond Water | KIERLKTDVERLRIDVEKLKDSVRANIGKLNGNH* |
Ga0102948_12569713 | 3300007623 | Water | DGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH* |
Ga0070751_11029954 | 3300007640 | Aqueous | DGMMNNRVNIERLQMDVERLRVDTEKLKDSVRANIGKLNGNH* |
Ga0102954_10654183 | 3300007778 | Water | NRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGDH* |
Ga0075480_105988143 | 3300008012 | Aqueous | LEKLTVRVDGMMNNRVKIERLQTDVERLRVDVEKLKDSVRANIGKLNGNH* |
Ga0102960_10119501 | 3300009000 | Pond Water | RVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH* |
Ga0102960_12642231 | 3300009000 | Pond Water | NIERIQKDIEKILSDVEKLKDSVRANLGKLNGDH* |
Ga0102963_10631561 | 3300009001 | Pond Water | VDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0102963_13120083 | 3300009001 | Pond Water | MMNNRVNIERLQMDVERLRVDTEKLKDSVRANIGKLNGNH* |
Ga0102957_11197801 | 3300009027 | Pond Water | NIDRLQQDVERLRIDVEKLKDSVRANIGKLNGDH* |
Ga0102957_13211073 | 3300009027 | Pond Water | TRVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGSH* |
Ga0115548_10900011 | 3300009423 | Pelagic Marine | RVDDMMKNKVNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0129286_101918581 | 3300009515 | Sediment | RVDGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH* |
Ga0114919_109112052 | 3300009529 | Deep Subsurface | MKNNRVNIERLQTDVERLRVDVEKLKDSVRANIGKLNGDH* |
Ga0114919_111816391 | 3300009529 | Deep Subsurface | RVDGMMNNRVNIERLQTDVERLRVDVEKLKDSVRANIGKLNGNH* |
Ga0129348_10453154 | 3300010296 | Freshwater To Marine Saline Gradient | IRVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH* |
Ga0129345_11317101 | 3300010297 | Freshwater To Marine Saline Gradient | RVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH* |
Ga0129345_12656203 | 3300010297 | Freshwater To Marine Saline Gradient | KAGATVTIRVDDMMNNKVNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH* |
Ga0129342_13243531 | 3300010299 | Freshwater To Marine Saline Gradient | MIKNRINNERLQMDVNKLQIDVEKLKDSVRANIGKLNGNH* |
Ga0129351_13077173 | 3300010300 | Freshwater To Marine Saline Gradient | VNIERLQSDVERLRIDVEKLKDSVRANIGKLNGDH* |
Ga0129351_13357013 | 3300010300 | Freshwater To Marine Saline Gradient | VDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH* |
Ga0136656_13209493 | 3300010318 | Freshwater To Marine Saline Gradient | MNNRVNIERLQMDVNKLQIDVEKLKDSVRANIGKLNGNH* |
Ga0129324_102938791 | 3300010368 | Freshwater To Marine Saline Gradient | KVNIDRLQTDVERLRIDVEKLKDSVRANLGKLNGNH* |
Ga0118733_1092234591 | 3300010430 | Marine Sediment | NKVNIERLQQDVERLRIDTEKLKDSVRTNIGKLNGDK* |
Ga0182074_15761561 | 3300016735 | Salt Marsh | NMTNKVNIERLQKDVDKILVDVEKLKDSVRANLGKLNGDH |
Ga0182082_13549611 | 3300016771 | Salt Marsh | VNINRLQQDVERLRIDVEKLKDSVRANIGKLNGDH |
Ga0181607_100125411 | 3300017950 | Salt Marsh | KVNIERLQLDVERLRIDVEKLKDSVRANLGKLNGNH |
Ga0181589_100944375 | 3300017964 | Salt Marsh | MKNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH |
Ga0181589_104476252 | 3300017964 | Salt Marsh | MMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0180438_105863221 | 3300017971 | Hypersaline Lake Sediment | TIRVDDMMNNKVNINRLQMDVERLRVDTEKLKDSVRANIGKLNGNH |
Ga0180434_105102351 | 3300017991 | Hypersaline Lake Sediment | IRVDGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNSH |
Ga0181601_107131351 | 3300018041 | Salt Marsh | RVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0180433_107237401 | 3300018080 | Hypersaline Lake Sediment | TVRVDGMMNNRVNIERLQMDVNKLQIDVEKLKDSVRANIGKLNGNH |
Ga0180433_110018643 | 3300018080 | Hypersaline Lake Sediment | GMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0181563_101231991 | 3300018420 | Salt Marsh | QEQNKTNKVNIERLQSDVERLRIDREKLKDSVRANIGKLNGSH |
Ga0181592_101280351 | 3300018421 | Salt Marsh | MMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH |
Ga0181592_107676481 | 3300018421 | Salt Marsh | NKVNIERLQSDVERLRIDVEKLKDSVRANIGKLNGDH |
Ga0181592_108169463 | 3300018421 | Salt Marsh | ERVDAMMNNKVNIDRLQTDVERLRIDVEKLKDSVRANLGKLNGNH |
Ga0194029_10015711 | 3300019751 | Freshwater | NNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH |
Ga0194024_10322494 | 3300019765 | Freshwater | VNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0213858_103976851 | 3300021356 | Seawater | VNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0213858_104622891 | 3300021356 | Seawater | DMMNNKVNINRLQMDVERLRIDTEKLKDSVRTNIGKLNGNH |
Ga0193945_10473101 | 3300021497 | Sediment | MMNNRVNIERLQTDVERLRVDVEKLKDSVRANIGKLNGNH |
Ga0222718_100909004 | 3300021958 | Estuarine Water | MTNKVNIERLQQDVERLRVDVEKLKDSVRANIGKLNGDH |
Ga0222718_101633841 | 3300021958 | Estuarine Water | IRVDGMMNNRVNIERLQMDVERLRVDTEKLKDSVRANIGKLNGNH |
Ga0222718_102012231 | 3300021958 | Estuarine Water | KVNIERLQSDVERLRIDVEKLKDSVRANIGKLNGDH |
Ga0222718_103028591 | 3300021958 | Estuarine Water | NNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0222718_106284501 | 3300021958 | Estuarine Water | VDGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGGH |
Ga0222716_100893915 | 3300021959 | Estuarine Water | QNMTNKVNIERLQLDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0222715_103080034 | 3300021960 | Estuarine Water | VDGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0222713_106231371 | 3300021962 | Estuarine Water | TKRVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH |
Ga0222719_102953911 | 3300021964 | Estuarine Water | TIRVDGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGTH |
Ga0212030_10571091 | 3300022053 | Aqueous | ESDGMMNNRVNIERLQKDVDRISIDVEKLKDSVRANIGKLNGAH |
Ga0212025_10426774 | 3300022057 | Aqueous | TERVDAMMNNKVNIDRLQNDVERLRIDVEKLKDSVRANLGKLNGNH |
Ga0212029_10445302 | 3300022063 | Aqueous | IRVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0212021_10257634 | 3300022068 | Aqueous | GQNMTNKVNILRLQSDVERLRIDVEKLKDSVRANIGKLNGDH |
Ga0212028_10042121 | 3300022071 | Aqueous | RVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0212020_10702751 | 3300022167 | Aqueous | DMMNNKVNIDRLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0196903_10079746 | 3300022169 | Aqueous | MMNNRVNIERLQTDVERLRIDVEKLKDSVRANLGKLNGNSH |
Ga0196905_11339773 | 3300022198 | Aqueous | VNIERLQKDVDKILVDVEKLKDSVRANLGKLNGDH |
Ga0224509_102593133 | 3300022306 | Sediment | MMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0224504_100866877 | 3300022308 | Sediment | LTIRVDGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0255773_103275501 | 3300022925 | Salt Marsh | VNIDRLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0255753_11104566 | 3300022926 | Salt Marsh | KVNINRLQQDVERLRIDVEKLKDSVRANIGKLNGDH |
Ga0255761_101291501 | 3300023170 | Salt Marsh | MMNNKVNINRLQTDVERLRIDVEKLKDSVRANIGKLNGNY |
Ga0209986_100816335 | 3300024433 | Deep Subsurface | NNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0208795_11131461 | 3300025655 | Aqueous | NRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0208767_11960921 | 3300025769 | Aqueous | DGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH |
Ga0208427_10895334 | 3300025771 | Aqueous | VDGMMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGDH |
Ga0208425_10135641 | 3300025803 | Aqueous | EQNMTNKVNIERLQSDVERLRIDVEKLKDSVRANIGKLNGDH |
Ga0208425_10508185 | 3300025803 | Aqueous | TTRVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRANIGKLNGNH |
Ga0209714_10815353 | 3300025822 | Pelagic Marine | MMNNRVNIERLQQDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0208547_11219713 | 3300025828 | Aqueous | MNNKVNINRLQIDVERLRVDVEKLKDSVRANIGKLNGTH |
Ga0209555_103111351 | 3300025879 | Marine | MTNKVNIERLQQDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0208644_101758412 | 3300025889 | Aqueous | KLTFRVDGMMNNRVNIERLQMDVGKLQVDVEKLKDSVRANIGKLNGNH |
Ga0208644_11015771 | 3300025889 | Aqueous | GMMNNRVNIERLQMDVERLRVDTEKLKDSVRANIGKLNGNH |
Ga0209932_10750731 | 3300026183 | Pond Water | RVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0209929_10967804 | 3300026187 | Pond Water | LEKLTIRVDDMMNNKVNIDRLQQDVERLRIDTEKLKDSVRANIGKLNGDH |
Ga0209929_11323891 | 3300026187 | Pond Water | NRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGNH |
Ga0307376_103221321 | 3300031578 | Soil | KVNIERLQKDVDRISIDVEKLKDSVRANIGKLNGNSH |
Ga0316205_100697155 | 3300032257 | Microbial Mat | TRVDGMMNNRVNIERLQMDVERLRIDTEKLKDSVRTNIGKLNGDK |
Ga0316203_12102981 | 3300032274 | Microbial Mat | VNIERLQQDVERLRIDVEKLKDSVRANLGKLNGNH |
Ga0348336_012142_4940_5053 | 3300034375 | Aqueous | NKVNINRLQMDVERLRIDTEKLKDSVRANIGKLNGNH |
Ga0348336_046828_1685_1807 | 3300034375 | Aqueous | MMNNRVNIERLQTDVERLRIDVEKLKDSVRANIGKLNGDH |
Ga0348336_174934_11_130 | 3300034375 | Aqueous | MTNKVNIERLQSDVERLRIDVEKLKDSVRANIGKLNGDH |
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