Basic Information | |
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Family ID | F065203 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 128 |
Average Sequence Length | 49 residues |
Representative Sequence | MLDSRTHEWLSRLQGNGPRLVSLALAALIAVELARIAISLLGGGPVKSPQ |
Number of Associated Samples | 116 |
Number of Associated Scaffolds | 128 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 14.17 % |
% of genes near scaffold ends (potentially truncated) | 98.44 % |
% of genes from short scaffolds (< 2000 bps) | 85.16 % |
Associated GOLD sequencing projects | 115 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.49 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (81.250 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.406 % of family members) |
Environment Ontology (ENVO) | Unclassified (27.344 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (59.375 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 52.56% β-sheet: 0.00% Coil/Unstructured: 47.44% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.49 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 128 Family Scaffolds |
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PF02617 | ClpS | 62.50 |
PF02861 | Clp_N | 23.44 |
PF07724 | AAA_2 | 3.12 |
PF03588 | Leu_Phe_trans | 1.56 |
PF10431 | ClpB_D2-small | 1.56 |
PF07992 | Pyr_redox_2 | 0.78 |
PF00202 | Aminotran_3 | 0.78 |
PF01176 | eIF-1a | 0.78 |
PF13649 | Methyltransf_25 | 0.78 |
PF04339 | FemAB_like | 0.78 |
COG ID | Name | Functional Category | % Frequency in 128 Family Scaffolds |
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COG2127 | ATP-dependent Clp protease adapter protein ClpS | Posttranslational modification, protein turnover, chaperones [O] | 62.50 |
COG0542 | ATP-dependent Clp protease, ATP-binding subunit ClpA | Posttranslational modification, protein turnover, chaperones [O] | 23.44 |
COG2360 | Leu/Phe-tRNA-protein transferase | Posttranslational modification, protein turnover, chaperones [O] | 1.56 |
COG0361 | Translation initiation factor IF-1 | Translation, ribosomal structure and biogenesis [J] | 0.78 |
COG3146 | Predicted N-acyltransferase | General function prediction only [R] | 0.78 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 81.25 % |
Unclassified | root | N/A | 18.75 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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2170459024|GZRSKLJ01BV1X4 | Not Available | 533 | Open in IMG/M |
3300001471|JGI12712J15308_10037337 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 1247 | Open in IMG/M |
3300001546|JGI12659J15293_10072697 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 758 | Open in IMG/M |
3300001593|JGI12635J15846_10157510 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 1549 | Open in IMG/M |
3300001593|JGI12635J15846_10267164 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1088 | Open in IMG/M |
3300001593|JGI12635J15846_10284315 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1043 | Open in IMG/M |
3300004152|Ga0062386_101031031 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 682 | Open in IMG/M |
3300004635|Ga0062388_101802982 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 628 | Open in IMG/M |
3300004635|Ga0062388_102875092 | Not Available | 508 | Open in IMG/M |
3300005591|Ga0070761_10096364 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 1700 | Open in IMG/M |
3300005610|Ga0070763_10274117 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 921 | Open in IMG/M |
3300005994|Ga0066789_10014119 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 3539 | Open in IMG/M |
3300005994|Ga0066789_10411557 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 565 | Open in IMG/M |
3300006050|Ga0075028_100482166 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 721 | Open in IMG/M |
3300006059|Ga0075017_100968104 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 662 | Open in IMG/M |
3300006086|Ga0075019_10312815 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 947 | Open in IMG/M |
3300007255|Ga0099791_10276550 | All Organisms → cellular organisms → Bacteria | 798 | Open in IMG/M |
3300009093|Ga0105240_11893213 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 621 | Open in IMG/M |
3300009510|Ga0116230_10828256 | All Organisms → cellular organisms → Bacteria | 686 | Open in IMG/M |
3300009520|Ga0116214_1263541 | Not Available | 656 | Open in IMG/M |
3300009524|Ga0116225_1394663 | Not Available | 615 | Open in IMG/M |
3300009651|Ga0105859_1102888 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 770 | Open in IMG/M |
3300009661|Ga0105858_1218032 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 568 | Open in IMG/M |
3300009700|Ga0116217_10618974 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 673 | Open in IMG/M |
3300009759|Ga0116101_1060352 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 831 | Open in IMG/M |
3300010339|Ga0074046_10230034 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 1157 | Open in IMG/M |
3300010341|Ga0074045_10829721 | Not Available | 584 | Open in IMG/M |
3300010343|Ga0074044_10540529 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 761 | Open in IMG/M |
3300010373|Ga0134128_10156423 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2576 | Open in IMG/M |
3300010865|Ga0126346_1090150 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 2502 | Open in IMG/M |
3300012096|Ga0137389_10662990 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae | 897 | Open in IMG/M |
3300012361|Ga0137360_11311481 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 625 | Open in IMG/M |
3300012685|Ga0137397_10580975 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 834 | Open in IMG/M |
3300012685|Ga0137397_11308326 | Not Available | 515 | Open in IMG/M |
3300014156|Ga0181518_10353837 | All Organisms → cellular organisms → Bacteria | 719 | Open in IMG/M |
3300014200|Ga0181526_10023813 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 3994 | Open in IMG/M |
3300014493|Ga0182016_10087448 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 2247 | Open in IMG/M |
3300014493|Ga0182016_10767158 | Not Available | 538 | Open in IMG/M |
3300014498|Ga0182019_10844058 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 657 | Open in IMG/M |
3300014501|Ga0182024_10248104 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 2390 | Open in IMG/M |
3300014502|Ga0182021_13527612 | Not Available | 520 | Open in IMG/M |
3300014655|Ga0181516_10126700 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 1291 | Open in IMG/M |
3300014657|Ga0181522_10439434 | All Organisms → cellular organisms → Bacteria | 783 | Open in IMG/M |
3300014838|Ga0182030_10226189 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 2183 | Open in IMG/M |
3300015204|Ga0167626_1002702 | Not Available | 10639 | Open in IMG/M |
3300015241|Ga0137418_11085499 | Not Available | 571 | Open in IMG/M |
3300016730|Ga0181515_1434323 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1234 | Open in IMG/M |
3300016750|Ga0181505_11062758 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1947 | Open in IMG/M |
3300018003|Ga0187876_1193668 | All Organisms → cellular organisms → Bacteria | 686 | Open in IMG/M |
3300018020|Ga0187861_10256106 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 762 | Open in IMG/M |
3300018030|Ga0187869_10516033 | Not Available | 567 | Open in IMG/M |
3300018034|Ga0187863_10643073 | Not Available | 598 | Open in IMG/M |
3300018042|Ga0187871_10151946 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1308 | Open in IMG/M |
3300018044|Ga0187890_10590177 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 626 | Open in IMG/M |
3300020580|Ga0210403_10021996 | Not Available | 5093 | Open in IMG/M |
3300020581|Ga0210399_10576440 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 932 | Open in IMG/M |
3300020583|Ga0210401_10113616 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 2541 | Open in IMG/M |
3300021168|Ga0210406_10672746 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 800 | Open in IMG/M |
3300021170|Ga0210400_10699789 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 833 | Open in IMG/M |
3300021180|Ga0210396_11292195 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 607 | Open in IMG/M |
3300021401|Ga0210393_11261470 | Not Available | 593 | Open in IMG/M |
3300021405|Ga0210387_11734121 | Not Available | 528 | Open in IMG/M |
3300021420|Ga0210394_10071340 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 3009 | Open in IMG/M |
3300021420|Ga0210394_10082780 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 2771 | Open in IMG/M |
3300021420|Ga0210394_11660167 | Not Available | 536 | Open in IMG/M |
3300021432|Ga0210384_10740667 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 878 | Open in IMG/M |
3300021475|Ga0210392_10867201 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 675 | Open in IMG/M |
3300021477|Ga0210398_11471888 | Not Available | 531 | Open in IMG/M |
3300021479|Ga0210410_10736983 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 868 | Open in IMG/M |
3300022532|Ga0242655_10181892 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 634 | Open in IMG/M |
3300022717|Ga0242661_1069915 | All Organisms → cellular organisms → Bacteria | 690 | Open in IMG/M |
3300024182|Ga0247669_1026192 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 991 | Open in IMG/M |
3300024186|Ga0247688_1043372 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 712 | Open in IMG/M |
3300024249|Ga0247676_1015425 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1191 | Open in IMG/M |
3300025359|Ga0208322_1005557 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1070 | Open in IMG/M |
3300025457|Ga0208850_1028891 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 961 | Open in IMG/M |
3300026515|Ga0257158_1072147 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 660 | Open in IMG/M |
3300026551|Ga0209648_10144039 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1891 | Open in IMG/M |
3300027432|Ga0209421_1040031 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 926 | Open in IMG/M |
3300027562|Ga0209735_1021219 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1329 | Open in IMG/M |
3300027575|Ga0209525_1059437 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 926 | Open in IMG/M |
3300027587|Ga0209220_1150612 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 601 | Open in IMG/M |
3300027590|Ga0209116_1079486 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 718 | Open in IMG/M |
3300027610|Ga0209528_1057430 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 862 | Open in IMG/M |
3300027610|Ga0209528_1089789 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 680 | Open in IMG/M |
3300027629|Ga0209422_1133562 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 563 | Open in IMG/M |
3300027648|Ga0209420_1037899 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1486 | Open in IMG/M |
3300027652|Ga0209007_1087279 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 786 | Open in IMG/M |
3300027676|Ga0209333_1089300 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 842 | Open in IMG/M |
3300027678|Ga0209011_1085012 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 933 | Open in IMG/M |
3300027812|Ga0209656_10449818 | Not Available | 570 | Open in IMG/M |
3300027829|Ga0209773_10456042 | Not Available | 528 | Open in IMG/M |
3300027846|Ga0209180_10578091 | Not Available | 623 | Open in IMG/M |
3300027867|Ga0209167_10501024 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 665 | Open in IMG/M |
3300027884|Ga0209275_10685019 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 590 | Open in IMG/M |
3300028906|Ga0308309_11407648 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 598 | Open in IMG/M |
3300029883|Ga0311327_10308704 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1026 | Open in IMG/M |
3300029919|Ga0302141_1114027 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 730 | Open in IMG/M |
3300029944|Ga0311352_10074708 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 3024 | Open in IMG/M |
3300029955|Ga0311342_10687357 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 810 | Open in IMG/M |
3300029989|Ga0311365_10410439 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1172 | Open in IMG/M |
3300030007|Ga0311338_11580564 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 601 | Open in IMG/M |
3300030045|Ga0302282_1005808 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 7805 | Open in IMG/M |
3300030503|Ga0311370_10043044 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 6715 | Open in IMG/M |
3300030688|Ga0311345_10645467 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 866 | Open in IMG/M |
3300030693|Ga0302313_10076580 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1418 | Open in IMG/M |
3300030763|Ga0265763_1039047 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 566 | Open in IMG/M |
3300031028|Ga0302180_10404940 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 682 | Open in IMG/M |
3300031122|Ga0170822_13781424 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 649 | Open in IMG/M |
3300031233|Ga0302307_10034837 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 2743 | Open in IMG/M |
3300031234|Ga0302325_12227508 | Not Available | 665 | Open in IMG/M |
3300031258|Ga0302318_10165762 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1044 | Open in IMG/M |
3300031259|Ga0302187_10091169 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1761 | Open in IMG/M |
3300031261|Ga0302140_10358469 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1199 | Open in IMG/M |
3300031525|Ga0302326_10671261 | All Organisms → cellular organisms → Bacteria | 1523 | Open in IMG/M |
3300031525|Ga0302326_10909465 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1250 | Open in IMG/M |
3300031525|Ga0302326_12436966 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 659 | Open in IMG/M |
3300031525|Ga0302326_13436895 | Not Available | 528 | Open in IMG/M |
3300031718|Ga0307474_10306927 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1223 | Open in IMG/M |
3300031902|Ga0302322_100716223 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1188 | Open in IMG/M |
3300031962|Ga0307479_10720063 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 976 | Open in IMG/M |
3300032160|Ga0311301_12005985 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 675 | Open in IMG/M |
3300032174|Ga0307470_10017714 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 3132 | Open in IMG/M |
3300032515|Ga0348332_11005931 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 698 | Open in IMG/M |
3300032893|Ga0335069_10158066 | Not Available | 2800 | Open in IMG/M |
3300033822|Ga0334828_035015 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1464 | Open in IMG/M |
3300034163|Ga0370515_0313072 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 664 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 16.41% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 13.28% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 8.59% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 6.25% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.47% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 5.47% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 3.91% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 3.12% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 3.12% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.12% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.34% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.34% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 2.34% |
Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 2.34% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 2.34% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 1.56% |
Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 1.56% |
Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 1.56% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 1.56% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.78% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.78% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.78% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.78% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.78% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 0.78% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.78% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.78% |
Glacier Forefield Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Glacier Forefield Soil | 0.78% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.78% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.78% |
Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.78% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.78% |
Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.78% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.78% |
Host-Associated | Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated | 0.78% |
Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 0.78% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2170459024 | Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml) | Environmental | Open in IMG/M |
3300001471 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 | Environmental | Open in IMG/M |
3300001546 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 | Environmental | Open in IMG/M |
3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
3300004152 | Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3 | Environmental | Open in IMG/M |
3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300005591 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 | Environmental | Open in IMG/M |
3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
3300005994 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 | Environmental | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006059 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012 | Environmental | Open in IMG/M |
3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009510 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG | Host-Associated | Open in IMG/M |
3300009520 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG | Environmental | Open in IMG/M |
3300009524 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG | Environmental | Open in IMG/M |
3300009651 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063 | Environmental | Open in IMG/M |
3300009661 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 | Environmental | Open in IMG/M |
3300009700 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG | Environmental | Open in IMG/M |
3300009759 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10 | Environmental | Open in IMG/M |
3300010339 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3 | Environmental | Open in IMG/M |
3300010341 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2 | Environmental | Open in IMG/M |
3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010865 | Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
3300014156 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG | Environmental | Open in IMG/M |
3300014200 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG | Environmental | Open in IMG/M |
3300014493 | Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG | Environmental | Open in IMG/M |
3300014498 | Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG | Environmental | Open in IMG/M |
3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300014502 | Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300014655 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG | Environmental | Open in IMG/M |
3300014657 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG | Environmental | Open in IMG/M |
3300014838 | Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300015204 | Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2B, Ice surface) | Environmental | Open in IMG/M |
3300015241 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300016730 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300016750 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
3300018003 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40 | Environmental | Open in IMG/M |
3300018020 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100 | Environmental | Open in IMG/M |
3300018030 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100 | Environmental | Open in IMG/M |
3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
3300018042 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 | Environmental | Open in IMG/M |
3300018044 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10 | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
3300022532 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022717 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300024182 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10 | Environmental | Open in IMG/M |
3300024186 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29 | Environmental | Open in IMG/M |
3300024249 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17 | Environmental | Open in IMG/M |
3300025359 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10 (SPAdes) | Environmental | Open in IMG/M |
3300025457 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes) | Environmental | Open in IMG/M |
3300026515 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A | Environmental | Open in IMG/M |
3300026551 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes) | Environmental | Open in IMG/M |
3300027432 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes) | Environmental | Open in IMG/M |
3300027562 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027575 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027587 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027590 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027610 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027629 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027648 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027652 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes) | Environmental | Open in IMG/M |
3300027676 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027678 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027812 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes) | Environmental | Open in IMG/M |
3300027829 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes) | Environmental | Open in IMG/M |
3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
3300029883 | I_Bog_E2 coassembly | Environmental | Open in IMG/M |
3300029919 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2 | Environmental | Open in IMG/M |
3300029944 | II_Palsa_E1 coassembly | Environmental | Open in IMG/M |
3300029955 | II_Bog_E2 coassembly | Environmental | Open in IMG/M |
3300029989 | III_Fen_N1 coassembly | Environmental | Open in IMG/M |
3300030007 | I_Palsa_E1 coassembly | Environmental | Open in IMG/M |
3300030045 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3 | Environmental | Open in IMG/M |
3300030503 | III_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300030688 | II_Bog_N2 coassembly | Environmental | Open in IMG/M |
3300030693 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2 | Environmental | Open in IMG/M |
3300030763 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031028 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2 | Environmental | Open in IMG/M |
3300031122 | Oak Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031233 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2 | Environmental | Open in IMG/M |
3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
3300031258 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1 | Environmental | Open in IMG/M |
3300031259 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3 | Environmental | Open in IMG/M |
3300031261 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1 | Environmental | Open in IMG/M |
3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
3300031902 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032515 | FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data) | Environmental | Open in IMG/M |
3300032893 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1 | Environmental | Open in IMG/M |
3300033822 | Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9 | Environmental | Open in IMG/M |
3300034163 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
FD1_10514370 | 2170459024 | Grass Soil | MLDSRAQEWLTRLQGNGPKLASLGLAALIGVELVRVMVSTFGGGPVRSPQPV |
JGI12712J15308_100373371 | 3300001471 | Forest Soil | MLDARTQGWLARIQGNGPRLVSMVLAVLIAVELARIVISLLSGGPVKSPQPVLSNAAPRS |
JGI12659J15293_100726973 | 3300001546 | Forest Soil | MADARTHDWLSRLQGNGPRLTSLVLALLIGAELVQIAVSLFG |
JGI12635J15846_101575103 | 3300001593 | Forest Soil | MLDTRTNEWLSRLQGNGPKLVSRALAALIAVELARIAISLLSGPVK |
JGI12635J15846_102671641 | 3300001593 | Forest Soil | MLDSRTHEWLSRLQGNGPRLVSLGLAALIAVELARIAISLLGGGPVKSPQPV |
JGI12635J15846_102843153 | 3300001593 | Forest Soil | MIAATVIMQNPRTNEWLSRLQANGPRLASLVLAALIAVELAKIVISLLGATPVK |
Ga0062386_1010310311 | 3300004152 | Bog Forest Soil | MQGMPTNEWLSRLQGNGPNLVSLALVALIAVELARIAMALLSGPVK |
Ga0062388_1018029822 | 3300004635 | Bog Forest Soil | MLDKRAQEWLSRLQGNGPRLASLGLAALIAVELARIAIAFLGGGPVKSPQ |
Ga0062388_1028750921 | 3300004635 | Bog Forest Soil | MLDTRTNEWLSRLRGNGPHLASLALSALIAVELARLAMSLLGGQVKSPQPVIATNPEPRP |
Ga0070761_100963641 | 3300005591 | Soil | MLDTRTNDWLSRLQGNGPKLVSRALAALIAVELARIAISLLSGPVKSPQP |
Ga0070763_102741171 | 3300005610 | Soil | MQGTPTNEWLSRLQGNGPNLVSLVLAALIAVELARI |
Ga0066789_100141191 | 3300005994 | Soil | MMDSRTNEWLSRLQGNGPNLAALALAALIVVELARIAVS |
Ga0066789_104115571 | 3300005994 | Soil | MLETRTHEWLSRLQGNGPRLVSFALATLIAVELARIGISLL |
Ga0075028_1004821661 | 3300006050 | Watersheds | MLGTQKNDWLSRLQGNGPTYVSFVLAALIVVELARLAISLLSGPVKSPEPV |
Ga0075017_1009681041 | 3300006059 | Watersheds | MLDSRTHGWLSRLPGNGPRLVSLGLAALIAVELARIAISLLSGTPVKSPQPV |
Ga0075019_103128153 | 3300006086 | Watersheds | MTDPRIQEWLSRLPRNAPWLVSMLLAALIAVELARVTVMLVSARGVRS |
Ga0099791_102765503 | 3300007255 | Vadose Zone Soil | LPVTVNIPNTMLDSRTHEWLSRLQGNGPRLASLGLAALIAVELARIAISLLGGGPVKSPQPA |
Ga0105240_118932132 | 3300009093 | Corn Rhizosphere | MLDARTNEWLSRLQGNGPRLISLALAALIAVDLVRIAVSLLNGNP |
Ga0116230_108282561 | 3300009510 | Host-Associated | MADLRKIEWLSRLQGNSPTYASFVLAALIVVEVARLAVAALSGPVK |
Ga0116214_12635411 | 3300009520 | Peatlands Soil | MLDTRTNEWLSRLRGNGPHLASLALSALIAAELARVAISLLGGPVKSPQPAIASSPELH |
Ga0116225_13946632 | 3300009524 | Peatlands Soil | MLDTRTNDWLTRLRGNGPHLASLTLSALIAVELARV |
Ga0105859_11028883 | 3300009651 | Permafrost Soil | MITDHGKSFATPMLDTRTQEWLSRLQGDGPRLATWVLAVLIAVELARIAVFSLSGPVKSPQPVLSN |
Ga0105858_12180322 | 3300009661 | Permafrost Soil | MLDTRRNEWLSRLQGNGPRLVSLAFAALIAVELVRI |
Ga0116217_106189742 | 3300009700 | Peatlands Soil | MLDTRTNEWLSRLQSNGPNLVSLSLAVLIAVELARMAVSVLSGPV |
Ga0116101_10603523 | 3300009759 | Peatland | MLDTRTNEWLARLQANGPTYVSFALAALIVVELARGAVFLLSSPVKSP |
Ga0074046_102300341 | 3300010339 | Bog Forest Soil | MLDTQKNEWLSRLRGDAPSYASLALAALIVVELARLAISLLSGPVKSPEPVM |
Ga0074045_108297211 | 3300010341 | Bog Forest Soil | MLDTRTTDWPARLRVNGPYYVSFALAALIAVELARLAITLLN |
Ga0074044_105405293 | 3300010343 | Bog Forest Soil | MIAATVTMLDTRTNEWLSRLQAKGPRLVSLVLAALIAAQLAQIAMILLVKPVKSPQPVLTGSV |
Ga0134128_101564231 | 3300010373 | Terrestrial Soil | MLDARTNEWLSRLQGNGPRLISLALAALIAVELVRIAVSLLGSGPVKSPQPALANVVPHAQHAALD |
Ga0126346_10901501 | 3300010865 | Boreal Forest Soil | MLDSRTHEWLSRLQGNGPKLVTLALAALIAVELARIAISMLGGGP |
Ga0137389_106629903 | 3300012096 | Vadose Zone Soil | MLDSRTNQWLSRLQGNGPAYVSLILAALIAIELARMAISFLGG |
Ga0137360_113114812 | 3300012361 | Vadose Zone Soil | MIAGHGNHSPIHMLDSRTHEWLSRLQGNGPRLVSLGLAALIAVELARIAISLLGGGPVKS |
Ga0137397_105809751 | 3300012685 | Vadose Zone Soil | MLDTRTHEWLSRLQGNGPRLVSLGLAALIAVELARIAISLLGGGP |
Ga0137397_113083261 | 3300012685 | Vadose Zone Soil | MLDSRTNQWLSRLQGNGPAYVSLILAALIAIELARMAISFLGGPVKSPQP |
Ga0181518_103538371 | 3300014156 | Bog | MTDMRIPDWLSRVPRNGPWLASLVLAALIAVELARIA |
Ga0181526_100238131 | 3300014200 | Bog | MLDTRTNDWLSRLQSNGPNLVSLGLAALIAVELARMAVSVL |
Ga0182016_100874483 | 3300014493 | Bog | MLDTRTNEWLTRLQANGPTYVSFALAALIVVELARGAVFLLSGPVKSPEPIAGHVPPPQ |
Ga0182016_107671582 | 3300014493 | Bog | MLDSRNATWLSRFESKGPNLVSLLLAALIAVELARIAVALVSAPV |
Ga0182019_108440581 | 3300014498 | Fen | MLDTQKNEWLSRLRGDAPSYASLALAALIVVELARLAISL |
Ga0182024_102481041 | 3300014501 | Permafrost | MLETRTHEWLSRLQADGPRLASWVVAVLIAVELARIFISLLGASPVRSPQPVLTSIVPR |
Ga0182021_135276121 | 3300014502 | Fen | MLDTRSNEWLSRLQGNGPRLVSLALAALIAVELAR |
Ga0181516_101267001 | 3300014655 | Bog | MLDSRNATWLSRLSSKGPHLVSLLLAALIAVELARI |
Ga0181522_104394343 | 3300014657 | Bog | MLDTPTNDWLTRLGGNGPHLATLALSALIAAELARAAISLLGGPVK |
Ga0182030_102261893 | 3300014838 | Bog | MIAGHMLDSRTTEWLSRLQGNGPRLVSYALGALIAVESAGVAISLLSRTPVSPPQTI |
Ga0167626_10027021 | 3300015204 | Glacier Forefield Soil | MLDMRVTEWLTRLGGNAPRLVSLGLAALIAVELARALIILLSGSPVKS |
Ga0137418_110854991 | 3300015241 | Vadose Zone Soil | MLDTRTNEWLSRLRGNGPHLASLGLAALIVVELARVAISMLGAPVKSPQPVIPKAVQ |
Ga0181515_14343231 | 3300016730 | Peatland | MLDTRTNDWLSRLQSNGPNLVSLGLAALIAVELVRMAVSVL |
Ga0181505_110627581 | 3300016750 | Peatland | MLDTRTNDWLSRLQSNGPNLVSLGLAALIAVELARMAVSVLSGPVKSPQPTLAPSAQTR |
Ga0187817_100219831 | 3300017955 | Freshwater Sediment | MLETRTNEWLSRLQGNGPNLVSLALAAIIAVELARVAVSLLSAPVKSPQPIMARTAQPRQHPGVDAQTLVSA |
Ga0187876_11936681 | 3300018003 | Peatland | MLDTQKNEWLSRLRGDAPSYASLALAALIVVELAR |
Ga0187861_102561063 | 3300018020 | Peatland | MLDTQKNEWLSRLRGDAPSYASLALAALIVVELARLA |
Ga0187869_105160331 | 3300018030 | Peatland | MLDTRTNDWLSRLQGNGPALVSLALAALIAVELARIAMSLLNAPVKSP |
Ga0187863_106430732 | 3300018034 | Peatland | MLDTRTTEWLSRLQANGPRAVAWALGALIAVELARIAAALLGGQAKSPEPVVEASV |
Ga0187871_101519461 | 3300018042 | Peatland | MLDTRTTQWLSRLQANGPSVATWVLALLIAAELARIAVSLLS |
Ga0187890_105901771 | 3300018044 | Peatland | MLDTRNEWLARLQSNGPYAVSIALAVLIAIEFARMAVALV |
Ga0210403_100219961 | 3300020580 | Soil | MIAATVIMQNPRTNEWLSRLQANGPRLASLVLAALIAVELARIVISL |
Ga0210399_105764401 | 3300020581 | Soil | MLDARTQGWLTRLQGNGPRLVSLGLAALIAVELARIAIALLSGNPVKSPQPVLTNAAPRA |
Ga0210401_101136161 | 3300020583 | Soil | MLDTRTTEWLSRLQANGPSAVAWVLAALIAVELARVAVALLSGPVKSPQPVVEATTPHPHAG |
Ga0210406_106727463 | 3300021168 | Soil | MIAATVIMQNPRTNEWLSRLQANGPRLASLVLAALIAVELAKIVISLLGATPVKSPQPILTGS |
Ga0210400_106997893 | 3300021170 | Soil | MADAHTHEWLSRLQGNGPRLMSLVLALLIGVEFAQIAVSLFGGGQVRSPQPVL |
Ga0210396_112921951 | 3300021180 | Soil | MLDARTQGWLARLQGNGPRLVSMVLAVLIAVELARIAISL |
Ga0210393_112614701 | 3300021401 | Soil | MLDPRTQEWLSRLQGNGPRLVSLALAALIAVELARIAISLLGGAPVR |
Ga0210387_117341212 | 3300021405 | Soil | MLETRSNEWLSRLQGNGPRLVSLGLAALIAVELARIAISLLGGT |
Ga0210394_100713403 | 3300021420 | Soil | MLDTRTHEWLSRLQGNGPRLVSLGLAALIAVELARIAISLLGGGPVKSPQPVLVGGAPVRST |
Ga0210394_100827803 | 3300021420 | Soil | MLDPRTQEWLSRLQGNGPRLVSLALAALIAVELARIAISL |
Ga0210394_116601671 | 3300021420 | Soil | MLDTRTTEWLSRLQANGPSAVAWVLGALIAVELARIAAALLSGQVKSPEPVVEA |
Ga0210384_107406673 | 3300021432 | Soil | MLDLRTHEWLSRLQGNGPRLVSLALAALIAVELARIAISLLGGGPVKSPQPALVSA |
Ga0210392_108672012 | 3300021475 | Soil | MLDSRAQEWLSRLQGNGPRLASLALAALIAVELARIAIALLGGGPVKSPQPELGNIAPRGAPHA |
Ga0210398_114718881 | 3300021477 | Soil | MLDTRTNEWLARLQSNGPNTVSIALAVLIAVELARMAVALV |
Ga0210410_107369831 | 3300021479 | Soil | MADARTPEWLSRLQGNGPRLTSLALALLIAVELVQIAVSVFGGGPVRSPQPVST |
Ga0242655_101818921 | 3300022532 | Soil | MLDSRTHEWLSRLQGNGPRLVSLGLAALIAVELARIAISLLGGGPVKSPQ |
Ga0242661_10699152 | 3300022717 | Soil | MPDSRTHEWLSRLQGNGPRLISLALAALIAVELARIAISLLGGGPVKSPQPVLANV |
Ga0247669_10261921 | 3300024182 | Soil | MIDLRAQEWLSRLQGNGPKLASLGLAALIGVELVRVIVSTFGGGPVRSPQP |
Ga0247688_10433722 | 3300024186 | Soil | MIDLRAQEWLSRLQGNGPKLASLGLAALIGVELVRVIVSTFGGG |
Ga0247676_10154251 | 3300024249 | Soil | MLDTRTNQWLSRLQGNGPAYVSLILAALIAVELARMAISVLGGPVRTPQPVV |
Ga0208322_10055571 | 3300025359 | Peatland | MLDTRSNDWLSRLQGNGPRLASLALAALIAVELARIAISLLGGGPVKSPQPVLSDATA |
Ga0208850_10288911 | 3300025457 | Arctic Peat Soil | MLDARTQGWLSRLQGNGPRLVSLALAALIAVELARIAISLLSG |
Ga0257158_10721472 | 3300026515 | Soil | MLDSRTHEWLSRLQGNGPRLVSLGLAALIAVELARIAVSLLGGGPV |
Ga0209648_101440393 | 3300026551 | Grasslands Soil | LPVTVNIPNTMLDSRTHEWLSRLQGNGPRLASLGLAALIAVELARIAISLLGGGPVKSPQPAVAGVAP |
Ga0209421_10400311 | 3300027432 | Forest Soil | MLDTRTNEWLSRLRGNGPHLASLALSALIAVEFARVAISLLGG |
Ga0209735_10212193 | 3300027562 | Forest Soil | MLDARAQGWLSRLQGNGPRLVSFALAALIAVELARIVISLLSGGP |
Ga0209525_10594373 | 3300027575 | Forest Soil | MLDTRAQQWLSRLQGNGPRLVSLGLAALIAVELARIAI |
Ga0209220_11506122 | 3300027587 | Forest Soil | MLDSRTQEWLSRLQANGPRLVSLGLAALIAVELARIAISLLSGGPVK |
Ga0209116_10794861 | 3300027590 | Forest Soil | MLDSRNATWLARLESKGPNFVSLLLAALIAVEVARI |
Ga0209528_10574301 | 3300027610 | Forest Soil | MLDTRTNQWLSRLQGNGPAYVSLILAALIAVELARMAISFLGGPVKTPQPTSA |
Ga0209528_10897892 | 3300027610 | Forest Soil | MLDSRTHEWLSRLQGNGPRLVSLALAALIAVELARIAISLLGGGPVKSPQ |
Ga0209422_11335621 | 3300027629 | Forest Soil | MLDSRTHEWLSRLQGNAPRLVSAGLAALIAVELARIAISL |
Ga0209420_10378993 | 3300027648 | Forest Soil | MIADHMLDSRTTEWLSRLQGNGPRLVSYALGTLIAVESAGIAISLLSRTPVSPPQA |
Ga0209007_10872791 | 3300027652 | Forest Soil | MLDTRAQQWLSRLQGNGPRLVSLGLAALIAVELARIAITLLSGGPVKSPQPVLGNIAPRAGQHA |
Ga0209333_10893003 | 3300027676 | Forest Soil | MLDSHTNEWLSRLQGNGPRLVSLALAALIAVELARIAISLLSGS |
Ga0209011_10850121 | 3300027678 | Forest Soil | MITGHLHHSPVTMLDSRTQEWLSRLQANGPRLVSLGLAALIAVELARIAISLLSGGPVK |
Ga0209656_104498182 | 3300027812 | Bog Forest Soil | MLATRSNHWLSRLQGNGPNLVSVALAALIAVELARIAASLLIGPVKTPQPT |
Ga0209773_104560421 | 3300027829 | Bog Forest Soil | MIAATVTMLDARTNEWLSRLQANGPRLVSLALAALIAAQLAQIARILLVKPVKPPQPVLAGPV |
Ga0209180_105780912 | 3300027846 | Vadose Zone Soil | MLDSRTHEWLSRLQGNGPRLASLGLAALIAVELARIAISLLGGGPVKSPQPAVAGRIKEHMT |
Ga0209167_105010241 | 3300027867 | Surface Soil | MADAHTHEWLSRLQGNGPRLMSLVLALLIGVEFAQIAVSLFGGGQVRS |
Ga0209275_106850192 | 3300027884 | Soil | MLDKRAQEWLSRLKGNGPRLASLGLAALIAVELARIAIAF |
Ga0308309_114076481 | 3300028906 | Soil | MQGTPTNEWLSRLQGNGPNLVSLVLAALIAVELARIAISFLSGPVKSPQPLIASTAQTR |
Ga0311327_103087043 | 3300029883 | Bog | MLDTRTNAWLSRLQANGPSVVTLVLAVLIAVELARMLVSVLSGPVKSPQPLVAAA |
Ga0302141_11140272 | 3300029919 | Bog | MLDTRLHDWLARLPRNGPWLVSLVLATLIAVELARMAVSLLGGSPLQSPISAPNRMPATT |
Ga0311352_100747081 | 3300029944 | Palsa | MLDTRAQHWLSRLQGNGPRLVSLGLAALIAVELARIAITLLGGGPVKSPQPV |
Ga0311342_106873571 | 3300029955 | Bog | MLETRAQEWLSRLQGDGPRLVSWFLAVLIAVELARIAVSLLGGGPVKSPQA |
Ga0311365_104104393 | 3300029989 | Fen | MLDPRTNQWLSRLQGNGPAYVSLILAALIAVELARM |
Ga0311338_115805642 | 3300030007 | Palsa | MLDTRTHEWLSRLQGDGPRLVSLGLAVLIAVELARIAV |
Ga0302282_10058088 | 3300030045 | Fen | MLDTRTTDWPARLRANGPHYVSFALAALIAVELARLAITTL |
Ga0311370_100430448 | 3300030503 | Palsa | MLDTRNVDWLSRLQGNGPKLVSRVLAALIAVELARIAISLLSGPVKSPQPVVARSVQTRPHAAAD |
Ga0311345_106454673 | 3300030688 | Bog | MFDTRSPEWLSRLQGNGPRLVSLALAALIAVELARIGISLLS |
Ga0302313_100765801 | 3300030693 | Palsa | MLDTRAQHWLSRLQGNGPRLVSLGLAALIAVELARIAITLLGG |
Ga0265763_10390471 | 3300030763 | Soil | MLDARTQGWLSRLQGNGPRLVSLALAALIAVELAR |
Ga0302180_104049403 | 3300031028 | Palsa | MIADHMLDSRTTEWLSRLQGNGPRLVSYALGTLIAVESAGVAISLL |
Ga0170822_137814242 | 3300031122 | Forest Soil | MLDLRAHEWLSRLQGNGPKLASLGLAALIGVELVRAIVSTFG |
Ga0302307_100348371 | 3300031233 | Palsa | MLDTRAQHWLSRLQGNGPRLVSLGLAALIAVELARIAITLLGGGPVKSPQPVLGNIPPRAGQHAG |
Ga0302325_122275082 | 3300031234 | Palsa | MPDTRTNEWLSRLQGSGPKLVSRALAALIAVELARIAISLLSGPVKS |
Ga0302318_101657621 | 3300031258 | Bog | MLDTRTTDWPARLRANGPHYVSFALAALIAVELARLAITTLNGPVKSQAPVR |
Ga0302187_100911691 | 3300031259 | Bog | MLDTRLHDWLARLPRNGPWLVSLVLATLIAVELARMAVSLLGG |
Ga0302140_103584693 | 3300031261 | Bog | MIAGHMLDSRTTEWLSRLQGNGPRLVSYALGALIAVESAGIAISLLSRG |
Ga0302326_106712613 | 3300031525 | Palsa | MLDTRTTEWLSRLQANGPSAVAWVLGALIAVELARIAAALLSGQVKSPEPVVE |
Ga0302326_109094651 | 3300031525 | Palsa | MLDTRTNEWLSRLQGNGPKLVSRALAALIAVELARIAISLLSGPVKSPQPVVARSV |
Ga0302326_124369661 | 3300031525 | Palsa | MIADHGNQSRHLMLDTRTHEWLSRLQGDGPRLASWVLAVLIAVELARIAVSLLSGSPVKSPQ |
Ga0302326_134368951 | 3300031525 | Palsa | MPDTRTNEWLSRLQGSGPKLVSRALAALIAVELARIAISLLSGPVKSPQPVVARS |
Ga0307474_103069271 | 3300031718 | Hardwood Forest Soil | MLDMRTNQWLSRLQGNGPTYVSLILAALIAVELARMAISFLGGPVKTPQPVVNRPAAPHL |
Ga0302322_1007162231 | 3300031902 | Fen | MLDTRTNQWLSRLQSNGPNLLSLAIAALIVVQLASVVISLLNGRVKSPQP |
Ga0307479_107200633 | 3300031962 | Hardwood Forest Soil | MLSMRTNQWLSRLQGNGPAYVSLILAALIAIELARIALSFLGGPV |
Ga0311301_120059852 | 3300032160 | Peatlands Soil | MLDTRTNEWLARLQSNGPNLVSLALAALIAVEFARMAVS |
Ga0307470_100177141 | 3300032174 | Hardwood Forest Soil | MLDSRTHEWLSRLQGNGPRLVSLALAALIAVELARIAISLLGGGPVKSPQPVLAGGAPRA |
Ga0348332_110059311 | 3300032515 | Plant Litter | MLDTRTNEWLARLQSNGPNTVSIALAILIAVELARMAVALVSGHVKTPE |
Ga0335069_101580661 | 3300032893 | Soil | MQETSSNLWLARWQGNGPTIVSLVLAALVAVELARIAM |
Ga0334828_035015_1315_1464 | 3300033822 | Soil | MLDTRTTDWPARLRANGPHYVSFALAALIAVELARLAITTLNGPVKSPAP |
Ga0370515_0313072_546_662 | 3300034163 | Untreated Peat Soil | MLDTHTNEWLSRLQGNGPRLVSLALAALIAVELARIAIS |
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