Metagenome / Metatranscriptome Family F065042

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065042
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	61 residues
Representative Sequence	KYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP
Number of Associated Samples	106
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.69 %
% of genes near scaffold ends (potentially truncated)	93.75 %
% of genes from short scaffolds (< 2000 bps)	89.06 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.219 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.312 % of family members)
Environment Ontology (ENVO)	Unclassified (32.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.656 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.33% Coil/Unstructured: 66.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF07883	Cupin_2	5.47
PF12680	SnoaL_2	4.69
PF04234	CopC	3.91
PF14542	Acetyltransf_CG	1.56
PF02674	Colicin_V	1.56
PF07992	Pyr_redox_2	1.56
PF04545	Sigma70_r4	1.56
PF13365	Trypsin_2	1.56
PF02219	MTHFR	0.78
PF04237	YjbR	0.78
PF01474	DAHP_synth_2	0.78
PF02643	DUF192	0.78
PF09851	SHOCT	0.78
PF10137	TIR-like	0.78
PF03476	MOSC_N	0.78
PF13189	Cytidylate_kin2	0.78
PF09852	DUF2079	0.78
PF13489	Methyltransf_23	0.78
PF01541	GIY-YIG	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	3.91
COG1286	Colicin V production accessory protein CvpA, regulator of purF expression and biofilm formation	Cell wall/membrane/envelope biogenesis [M]	1.56
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	0.78
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	0.78
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.78
COG3200	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, class II	Amino acid transport and metabolism [E]	0.78
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.25 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	3.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.34 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	46.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	28.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.34 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.78 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.78 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.78 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.78 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.78 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.78 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.78 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.78 %
Geodermatophilaceae bacterium URHA0031	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHA0031	0.78 %
Kribbella catacumbae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	0.78 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.78 %
Geodermatophilaceae bacterium URHA0031	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHA0031	0.78 %
Kribbella catacumbae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	0.78 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Unclassified	root	N/A	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0666050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300004157\|Ga0062590_100310521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1234	Open in IMG/M
3300004157\|Ga0062590_102336709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300004463\|Ga0063356_103266371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300004479\|Ga0062595_100609921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300004479\|Ga0062595_102656310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300004480\|Ga0062592_101563546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300004480\|Ga0062592_101779109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300004643\|Ga0062591_102594720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	534	Open in IMG/M
3300005093\|Ga0062594_100083643	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300005093\|Ga0062594_102204379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300005328\|Ga0070676_11045810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300005332\|Ga0066388_102832083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300005334\|Ga0068869_101702059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300005343\|Ga0070687_100015253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3469	Open in IMG/M
3300005344\|Ga0070661_100453264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300005364\|Ga0070673_101210552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300005440\|Ga0070705_101125298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300005441\|Ga0070700_101031868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300005441\|Ga0070700_101720038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300005536\|Ga0070697_100084413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2619	Open in IMG/M
3300005546\|Ga0070696_101588206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300005615\|Ga0070702_100159333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1457	Open in IMG/M
3300005718\|Ga0068866_10885218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300005719\|Ga0068861_102158757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300005840\|Ga0068870_11406487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300005842\|Ga0068858_101692667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300006173\|Ga0070716_100552625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	859	Open in IMG/M
3300006575\|Ga0074053_10240870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300006797\|Ga0066659_11882902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	508	Open in IMG/M
3300006845\|Ga0075421_101585479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300006852\|Ga0075433_11670369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300006854\|Ga0075425_102932913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300006871\|Ga0075434_101760735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300006881\|Ga0068865_100056897	All Organisms → cellular organisms → Bacteria	2726	Open in IMG/M
3300006914\|Ga0075436_100580528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	825	Open in IMG/M
3300006918\|Ga0079216_11400964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHA0031	578	Open in IMG/M
3300006969\|Ga0075419_10978710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	614	Open in IMG/M
3300009094\|Ga0111539_11219893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300009098\|Ga0105245_11183860	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	812	Open in IMG/M
3300009156\|Ga0111538_10698969	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300009156\|Ga0111538_12219933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300009162\|Ga0075423_12836283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300009174\|Ga0105241_10073017	All Organisms → cellular organisms → Bacteria	2668	Open in IMG/M
3300009176\|Ga0105242_13267554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300009177\|Ga0105248_10127176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2874	Open in IMG/M
3300009610\|Ga0105340_1579583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300009837\|Ga0105058_1026605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1237	Open in IMG/M
3300010040\|Ga0126308_10278475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1094	Open in IMG/M
3300010359\|Ga0126376_13275575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300010375\|Ga0105239_10075497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3706	Open in IMG/M
3300010396\|Ga0134126_11916651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300010396\|Ga0134126_12151211	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300011119\|Ga0105246_11110957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	722	Open in IMG/M
3300012011\|Ga0120152_1048963	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300012045\|Ga0136623_10058888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1677	Open in IMG/M
3300012186\|Ga0136620_10077887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1539	Open in IMG/M
3300012530\|Ga0136635_10002165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6196	Open in IMG/M
3300012678\|Ga0136615_10046793	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2186	Open in IMG/M
3300012679\|Ga0136616_10476438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300012680\|Ga0136612_10126278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1299	Open in IMG/M
3300012684\|Ga0136614_10231098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300012684\|Ga0136614_10623127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300012897\|Ga0157285_10061414	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300012897\|Ga0157285_10334807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300012905\|Ga0157296_10132913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300012909\|Ga0157290_10045550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300012955\|Ga0164298_10668941	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012955\|Ga0164298_11269197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300012960\|Ga0164301_10320981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300012960\|Ga0164301_11503709	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012961\|Ga0164302_10738352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300012986\|Ga0164304_10948477	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300012988\|Ga0164306_10267535	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300013297\|Ga0157378_10928601	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	902	Open in IMG/M
3300013297\|Ga0157378_13250866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300013308\|Ga0157375_13745053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300013501\|Ga0120154_1000278	All Organisms → cellular organisms → Bacteria	22485	Open in IMG/M
3300014325\|Ga0163163_11283214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300014745\|Ga0157377_10017595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3698	Open in IMG/M
3300014968\|Ga0157379_10079199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2942	Open in IMG/M
3300014969\|Ga0157376_11893089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300014969\|Ga0157376_13117867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300015077\|Ga0173483_10512219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300015077\|Ga0173483_10687572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300015373\|Ga0132257_103931821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300015374\|Ga0132255_101618970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300017787\|Ga0183260_10379197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300017787\|Ga0183260_10497369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300017789\|Ga0136617_10889178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300017792\|Ga0163161_12066598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300018469\|Ga0190270_10486930	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300018469\|Ga0190270_12983634	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300018481\|Ga0190271_10657717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1169	Open in IMG/M
3300019356\|Ga0173481_10027946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1782	Open in IMG/M
3300019356\|Ga0173481_10042964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1518	Open in IMG/M
3300019356\|Ga0173481_10237094	All Organisms → cellular organisms → Bacteria → Terrabacteria group	813	Open in IMG/M
3300020064\|Ga0180107_1168762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300022898\|Ga0247745_1024385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300023266\|Ga0247789_1047903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300025899\|Ga0207642_10851151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300025912\|Ga0207707_10441262	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1114	Open in IMG/M
3300025920\|Ga0207649_10430199	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300025927\|Ga0207687_10537868	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	979	Open in IMG/M
3300025934\|Ga0207686_10003526	All Organisms → cellular organisms → Bacteria	8403	Open in IMG/M
3300025945\|Ga0207679_11664901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300026041\|Ga0207639_10017039	All Organisms → cellular organisms → Bacteria	5148	Open in IMG/M
3300026089\|Ga0207648_10192009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1810	Open in IMG/M
3300026089\|Ga0207648_11311643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300026116\|Ga0207674_11952749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300027907\|Ga0207428_10462660	All Organisms → cellular organisms → Bacteria → Terrabacteria group	924	Open in IMG/M
3300027909\|Ga0209382_10818889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
3300028379\|Ga0268266_10552265	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1104	Open in IMG/M
3300028744\|Ga0307318_10248019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300028793\|Ga0307299_10353458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300028802\|Ga0307503_10040770	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1709	Open in IMG/M
3300028819\|Ga0307296_10029904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	2873	Open in IMG/M
3300028819\|Ga0307296_10088422	Not Available	1655	Open in IMG/M
3300030336\|Ga0247826_11133973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300031170\|Ga0307498_10068298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300031170\|Ga0307498_10108018	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300031562\|Ga0310886_10236083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300031562\|Ga0310886_10827758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300031858\|Ga0310892_10759701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300032003\|Ga0310897_10725063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300032075\|Ga0310890_11010430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300033550\|Ga0247829_10651220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
3300034147\|Ga0364925_0256478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.72%
Host-Associated	Host-Associated	38.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.56%
Plants	Host-Associated → Plants	38.28%
Aquatic	Environmental → Aquatic	10.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.72%
Freshwater	Environmental → Aquatic → Freshwater	9.38%
Sediment	Environmental → Aquatic → Sediment	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.16%
Ice	Environmental → Aquatic → Freshwater → Ice	8.59%
Loam	Environmental → Terrestrial → Soil → Loam	7.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.38%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	8.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.38%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020064	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_06660501	2228664021	Soil	VVSVAQGEGTLYHGVSGCPAHKYATGTSFFQPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0062590_1003105211	3300004157	Soil	LYHAMSGCPSVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0062590_1023367091	3300004157	Soil	PSTEVHNMRNEGTTPLVLHAFYFLPAGTANAAIRVDQAQPANCPSIP*
Ga0063356_1032663711	3300004463	Arabidopsis Thaliana Rhizosphere	FVAVAQGEGTLYHGMSGCPSFKYAVGAGFMQPPTEVHNMRNEGTTPLVLWAFYALPPGTANAAIRIDQPQPAGCPNIP*
Ga0062595_1006099212	3300004479	Soil	QGEGTLYHGMSGCPAVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0062595_1026563102	3300004479	Soil	THPGPTFVAVAQGDGTMYRAGGSGCDPMKYAVGQGFLQPSTEVHNMRNEGTTPLVLHAFYLLPPGTANAAIRIDQPQPANCPNIP*
Ga0062592_1015635462	3300004480	Soil	GPTFVAVAQGEGTLYHAMSGCPSVKYASGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0062592_1017791091	3300004480	Soil	AVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTQTTAIRIDQPQPAECPNIP*
Ga0062591_1025947201	3300004643	Soil	TVVSVAQGEGTLYHGVSGCPAHKYATGTSFFQPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0062594_1000836431	3300005093	Soil	AQGEGTLYHGMSGCPSFKYAVGAGFMQPPTEVHNMRNEGTTPLVLWAFYALPPGTANAAIRVDQPQPAECPNIP*
Ga0062594_1022043791	3300005093	Soil	FMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0070676_110458102	3300005328	Miscanthus Rhizosphere	AVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0066388_1028320831	3300005332	Tropical Forest Soil	GTLYHAMSGCPSVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0068869_1017020592	3300005334	Miscanthus Rhizosphere	GPTFVAVAQGEGTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0070687_1000152531	3300005343	Switchgrass Rhizosphere	CPAHKYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0070661_1004532641	3300005344	Corn Rhizosphere	AHKYATGTSFFQPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0070673_1012105522	3300005364	Switchgrass Rhizosphere	QGEGTLYHGISGCPAHKYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0070705_1011252982	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP*
Ga0070700_1010318682	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VKYATGSGFMQPPTEIHNMRNEGTTPLVLWAFYALPPGTTNAAIRVDQPQPAECPNIP*
Ga0070700_1017200382	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SGCPAHKYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0070697_1000844131	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KYGAGSGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPRPAECPNIP*
Ga0070696_1015882061	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0070702_1001593331	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TLYHAMSGCPSVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0068866_108852181	3300005718	Miscanthus Rhizosphere	GFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP*
Ga0068861_1021587572	3300005719	Switchgrass Rhizosphere	KYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0068870_114064872	3300005840	Miscanthus Rhizosphere	TLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP*
Ga0068858_1016926671	3300005842	Switchgrass Rhizosphere	TKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP*
Ga0070716_1005526252	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSGCPATKYGVGAGFMQPPTEVHNMRNEGSGPLVLWAFYALPPGTSNAAIRIDQPRPAECPNIP*
Ga0074053_102408702	3300006575	Soil	PGPTFVAVAQGEGTLYHGMSGCPSFKYAVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTANAAIRIDQPQPAECPNIP*
Ga0066659_118829022	3300006797	Soil	MQPPTEVHNMRNEGSKPLVLWAFYALPPGTSNAAIRVDQPQPTECPNIP*
Ga0075421_1015854792	3300006845	Populus Rhizosphere	PTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0075433_116703691	3300006852	Populus Rhizosphere	HGTSGCPAHKYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0075425_1029329131	3300006854	Populus Rhizosphere	TFVAVAQGEGTLYHGMPGCPSFKYAVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTPNTAIRVDQPQPAECPNIP*
Ga0075434_1017607351	3300006871	Populus Rhizosphere	GPTFVAVAQGEGTLYHGMPGCPSFKYAVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTPNTAIRVDQPQPAECPNIP*
Ga0068865_1000568971	3300006881	Miscanthus Rhizosphere	GCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0075436_1005805281	3300006914	Populus Rhizosphere	HGMSGCPMVKYGAGSGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPRPAECPNIP*
Ga0079216_114009641	3300006918	Agricultural Soil	EVHNMRNEGATPLVLHAFYFLPAGTANAAIRVDQAQPANCPSIP*
Ga0075419_109787101	3300006969	Populus Rhizosphere	TTPLVLWAFYALPPGTANSAIRIDQPQPAECPNIP*
Ga0111539_112198931	3300009094	Populus Rhizosphere	TGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPRPAECPNIP*
Ga0105245_111838602	3300009098	Miscanthus Rhizosphere	AVAQGEGTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0111538_106989693	3300009156	Populus Rhizosphere	EGTLYHGMAGCPMVKYGSGSGFMQPPTEVHNMRNEGSSPLVLWAFYALPPGTSNAAIRIDQPRPAECPNIP*
Ga0111538_122199331	3300009156	Populus Rhizosphere	EVHNMRNEGSTPLVLWAFYALPPGTTNAAIRVDQPQPAECPNIP*
Ga0075423_128362832	3300009162	Populus Rhizosphere	FVAVAQGEGTLYHGMSGCPATKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTANAAIRIDQPKPAECPNIP*
Ga0105241_100730175	3300009174	Corn Rhizosphere	GVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP*
Ga0105242_132675542	3300009176	Miscanthus Rhizosphere	EGTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0105248_101271761	3300009177	Switchgrass Rhizosphere	EVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0105340_15795831	3300009610	Soil	PTEVHNMRNEGTTPLVLWAFYALPPGTTNAAIRVDQPQPAECPTIP*
Ga0105058_10266051	3300009837	Groundwater Sand	FVAVAQGEGTLYHGVAGCPAHKYAPNTGFFQPTTEVHNFRNEGSTALVVFAFYALPSGTPNTGIRVDQPQPASCSNIP*
Ga0126308_102784752	3300010040	Serpentine Soil	MTGCPSHKYGAGAGFFQPSTEVHNFRNEGSSELVVYGLYLLPPGTPNTGIRIDQPQPSSCTQIP*
Ga0126376_132755751	3300010359	Tropical Forest Soil	GMSGCPQMKYAAGSGFMQPPTEVHNMRNEGSAPLVLWAFYALPPGTTNAGIRIDQPRPAECPNIP*
Ga0105239_100754971	3300010375	Corn Rhizosphere	PTTEVHNFRNEGSDPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0134126_119166511	3300010396	Terrestrial Soil	GFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPRPAECPNIP*
Ga0134126_121512111	3300010396	Terrestrial Soil	NMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP*
Ga0105246_111109571	3300011119	Miscanthus Rhizosphere	KYATGTSFFQPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0120152_10489633	3300012011	Permafrost	GTVPLVVYAFYILPSGTENAAIRIDQPAPAACPGIN*
Ga0136623_100588881	3300012045	Polar Desert Sand	SGFLQHSTEVHNMRNEGSTALVLHAFYLLPPGTADAAIRVDQPQAANCPNIP*
Ga0136620_100778871	3300012186	Polar Desert Sand	HSTEVHNMRNEGSTPLVLHAFYLLPPGTDNTAIRIDQPQPANCPTIP*
Ga0136635_100021651	3300012530	Polar Desert Sand	ATGAAFMQPQTEVHNMRNEASKPLVLWAFYALPPGTPNTAIRIDQPQPAACPNIP*
Ga0136615_100467931	3300012678	Polar Desert Sand	TMYRGGGTGCTPTKYAVGAGFLQHTTEVHNMRNEGSTPLVLHAFYLLPPGTTNTGIRIDQPQPANCPTIP*
Ga0136616_104764381	3300012679	Polar Desert Sand	KYAVGAGFLQHSTEVHNMRNEGSTPLVLHAFYLLPPGTTNTGIRIDQPQPANCPTIP*
Ga0136612_101262781	3300012680	Polar Desert Sand	MYRAAASGCTGVKYGPGSGFLQPSTEIHNMRNEGSTPLVLHAFYVLPPGTQDTAIRVDQAQPTNCPAIP*
Ga0136614_102310981	3300012684	Polar Desert Sand	TPTKYAVGAGFLQHSTEVHNMRNEGSTPLVLHAFYLLPPGTDNAAIRIDQPQPANCPTIP
Ga0136614_106231271	3300012684	Polar Desert Sand	TPTKYAVGAGFLQHSTEVHNMRNEGSTPLVLHAFYLLPPGTTNTGIRIDQPQPANCPTIP
Ga0157285_100614141	3300012897	Soil	ATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0157285_103348072	3300012897	Soil	GCPAVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0157296_101329131	3300012905	Soil	QPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0157290_100455501	3300012909	Soil	MRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0164298_106689412	3300012955	Soil	GCPATKYAAGSGFMQPPTEVHNMRNEGSAPLVLWAFYALPPGTSNAAIRIDQPKPAECPNIP*
Ga0164298_112691972	3300012955	Soil	HTHPGPTFVAVAPGEGKLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0164301_103209811	3300012960	Soil	AHKYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0164301_115037091	3300012960	Soil	GFMQPPTEVHNMRNEGSAPLVLWAFYTLPPGTSNAAIRIDQPRPAECPNIP*
Ga0164302_107383521	3300012961	Soil	HNMRNESSTPLVLWAFYALPPGTANTAIRVDQPQPAECPNIP*
Ga0164304_109484772	3300012986	Soil	AMSGCPATKYDVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPKPAECPNIP*
Ga0164306_102675351	3300012988	Soil	GEGTLYHAMSGCPATKYAAGSGFMQPPTEVHNMRNEGSAPLVLWAFYTLPPGTSNAAIRIDQPRPAECPNIP*
Ga0157378_109286011	3300013297	Miscanthus Rhizosphere	GPTFVAVAQGEGTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP*
Ga0157378_132508661	3300013297	Miscanthus Rhizosphere	PPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0157375_137450531	3300013308	Miscanthus Rhizosphere	GSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP*
Ga0120154_10002781	3300013501	Permafrost	VLHNEGTVPLVVYAFYILPSGTENAAIRIDQPAPAACPGIN*
Ga0163163_112832142	3300014325	Switchgrass Rhizosphere	MKYAVGQGFLQPSTEVHNMRNEGTTPLVLHAFYLLPPGTANAAIRIDQPQPANCPNIP*
Ga0157377_100175951	3300014745	Miscanthus Rhizosphere	ISGCPAHKYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0157379_100791996	3300014968	Switchgrass Rhizosphere	ATGTSFFQPTTEVHNFRNEGSDPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP*
Ga0157376_118930891	3300014969	Miscanthus Rhizosphere	GEGTLYHGMSGCPSFKYAVGAGFMQTPTEVHNMRNEGTTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP*
Ga0157376_131178671	3300014969	Miscanthus Rhizosphere	PAHKYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0173483_105122191	3300015077	Soil	TEVHNMRNEGSTPLVLWAFYALPPGTSNTAIRIDQPQPAECPNIP*
Ga0173483_106875722	3300015077	Soil	MYRAAASGCTPTKYGVGAGFLPPSTEVHNMRNEGTTPLVLHAFYFLPAGTANAAIRVDQAQPANRPSIP*
Ga0132257_1039318212	3300015373	Arabidopsis Rhizosphere	PTEVHNMRNEGSTPLVLWAFYALPPGTQTTAIRIDQPQPAECPNIP*
Ga0132255_1016189702	3300015374	Arabidopsis Rhizosphere	GMSGCPSIKYAVGAGFMQPPTEVHNMRNEGSTPLVLWPFYALPPGTTNAAIRIDQPQPAECPNIP*
Ga0183260_103791973	3300017787	Polar Desert Sand	KYGPGSGFLQPSTEIHNMRNEGSTPLVLHAFYVLPPGTQDAAIRVDQAQPTNCPAIP
Ga0183260_104973692	3300017787	Polar Desert Sand	TMYRGGGTGCTPTKYAVGAGFLQHTTEVHNMRNEGSTPLVLHAFYLLPPGTTNTGIRIDQPQPANCPTIP
Ga0136617_108891781	3300017789	Polar Desert Sand	TMYRGGGTGCTPTKYAVGAGFLQHTTEVHNMRNEGSTPLVLHAFYLLPPGTDNAAIRIDQPQPANCPTIP
Ga0163161_120665981	3300017792	Switchgrass Rhizosphere	AHKYATGTSFFQPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0190270_104869303	3300018469	Soil	FVAVAQGEGTLYHGMSGCPSVKYGTGAGFMQPSTEVHNMRNEASTPLVLWAFYALPPGTANAAIRIDQPQPAECPNIP
Ga0190270_129836341	3300018469	Soil	GGFFQPSTEVHNFRNEGAGPLVVYAMYYLPSGTPNTGIRIDQAQPGNCPSVP
Ga0190271_106577171	3300018481	Soil	HNMRNEGSTPLVLWAFYALPPGTTNAAIRIDQPQPAECPNIP
Ga0173481_100279463	3300019356	Soil	TLYHAMSGCPSVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP
Ga0173481_100429641	3300019356	Soil	PTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP
Ga0173481_102370942	3300019356	Soil	YHGMSGCPSFKYAVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTQTTAIRIDQPQPAECPNIP
Ga0180107_11687621	3300020064	Groundwater Sediment	TSFFQPSTEVHNFRNEGSAPLVVYAVYYLPAGTPNTGIRLDQPQPVSCTNVP
Ga0247745_10243852	3300022898	Soil	PGPTFVAVAQGEGTLYHAMSGCPSVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP
Ga0247789_10479031	3300023266	Soil	ATGTSFFQPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0207642_108511512	3300025899	Miscanthus Rhizosphere	AQGEGTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP
Ga0207707_104412622	3300025912	Corn Rhizosphere	EGTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP
Ga0207649_104301991	3300025920	Corn Rhizosphere	TGTSFFQPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0207687_105378682	3300025927	Miscanthus Rhizosphere	PTFVAVAQGEGTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP
Ga0207686_100035261	3300025934	Miscanthus Rhizosphere	ATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP
Ga0207679_116649011	3300025945	Corn Rhizosphere	LYHGVSGCPAHKYATGTSFFQPTTEVHNFRNEGSETLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0207639_100170396	3300026041	Corn Rhizosphere	THPGPTFVAVAQGEGTLYHAMSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRVDQPQPAECPNIP
Ga0207648_101920091	3300026089	Miscanthus Rhizosphere	ATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNTAIRIDQPQPAECPNIP
Ga0207648_113116432	3300026089	Miscanthus Rhizosphere	PTFVAVAQGEGTLYHGMSGCPSFKYAVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAAIRVDQPQPAECPNIP
Ga0207674_119527491	3300026116	Corn Rhizosphere	HKYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0207428_104626602	3300027907	Populus Rhizosphere	QPPTEVHNMRNEGSTPLVLWAFYALPPGTQTTAIRIDQPQPAECPNIP
Ga0209382_108188892	3300027909	Populus Rhizosphere	MRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP
Ga0268266_105522653	3300028379	Switchgrass Rhizosphere	MSGCPATKYGVGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP
Ga0307318_102480193	3300028744	Soil	RNEGTSPLVLWAFYALPPGTTNAAIRVDQPQPAACPNIP
Ga0307299_103534581	3300028793	Soil	PGPTLVAVAQGEGTLYHDMSGCPAHKYATGGGFFQPSTEVHNFRNEGAGPLVVYAMYYLPSGRPNTGIRIDQAQPGNCPNIP
Ga0307503_100407701	3300028802	Soil	YAAGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTANAAIRVDQPQPAECANIP
Ga0307296_100299042	3300028819	Soil	VAVAQGEGTLYHDMSGCPAHKYATGGGFFQPSTEVHNFRNEGAGPLVVYAMYYLPSGRPNTGIRIDQAQPGNCPNIP
Ga0307296_100884221	3300028819	Soil	EGTMPLVLWAFYALPPGTANAAIRIDQPQPAECPNIP
Ga0247826_111339731	3300030336	Soil	YQDASGCPAAKYAANSGFFQPSSEIHNFRNEGSAALTVFAFYMLPSGTANTAIRTDQAQPTSCANIP
Ga0307498_100682981	3300031170	Soil	VAVAQGKGTLYHAMSGCPATKYAAGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTSNAAIRIDQPQPAECPNIP
Ga0307498_101080182	3300031170	Soil	HNMRNEGSTPLVLWAFYALPPGTANTAIRIDQPQPAECPNIP
Ga0310886_102360833	3300031562	Soil	ATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0310886_108277581	3300031562	Soil	KYATGRGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTTNAGIRIDQPQPAECPNIP
Ga0310892_107597012	3300031858	Soil	NYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0310897_107250631	3300032003	Soil	KYATGTSFFQPTTEVHNFRNEGSEPLVVYALYYLPAGTPNTGIRIDQPQPASCPTIP
Ga0310890_110104301	3300032075	Soil	GEGTLYHGMSGCPSVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTANTAIRIDQPQPAECPNIP
Ga0247829_106512201	3300033550	Soil	TLYHAMSGCPSVKYATGAGFMQPPTEVHNMRNEGSTPLVLWAFYALPPGTPNTAIRIDQPQPAECPNIP
Ga0364925_0256478_299_493	3300034147	Sediment	MSGCPSFKYAVGAGFMQPPTEVHNMRNEGTTPLVLWAFYALPPGTANAAIRVDQPQPAECPNIP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065042

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences