Metagenome / Metatranscriptome Family F064976

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064976
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	94 residues
Representative Sequence	MRKAHLLICPLLLLFCPPSFAQESSRGGSAKQDAPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKAS
Number of Associated Samples	104
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.34 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	92.19 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.219 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.531 % of family members)
Environment Ontology (ENVO)	Unclassified (40.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.62% β-sheet: 0.00% Coil/Unstructured: 57.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF07719	TPR_2	45.31
PF13414	TPR_11	25.78
PF14559	TPR_19	9.38
PF13428	TPR_14	6.25
PF13424	TPR_12	3.91
PF00155	Aminotran_1_2	2.34
PF13181	TPR_8	1.56
PF13432	TPR_16	0.78
PF13174	TPR_6	0.78
PF16124	RecQ_Zn_bind	0.78

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	87.50 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	87.50 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	73.44 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.44 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.78 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.44 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.78 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.44 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.78 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.44 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.78 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.78 %
Unclassified	root	N/A	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig34844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300000955\|JGI1027J12803_101028454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300000955\|JGI1027J12803_101744435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1656	Open in IMG/M
3300002911\|JGI25390J43892_10105654	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300004156\|Ga0062589_100792598	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300004463\|Ga0063356_103113244	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005093\|Ga0062594_103206999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	513	Open in IMG/M
3300005168\|Ga0066809_10189706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	551	Open in IMG/M
3300005187\|Ga0066675_10657273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300005293\|Ga0065715_10319769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	942	Open in IMG/M
3300005293\|Ga0065715_10814105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300005294\|Ga0065705_10012167	All Organisms → cellular organisms → Bacteria	4133	Open in IMG/M
3300005294\|Ga0065705_10303931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1047	Open in IMG/M
3300005295\|Ga0065707_10535345	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	731	Open in IMG/M
3300005329\|Ga0070683_101094146	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005331\|Ga0070670_100973823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300005338\|Ga0068868_100650040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	939	Open in IMG/M
3300005344\|Ga0070661_100472830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1000	Open in IMG/M
3300005436\|Ga0070713_100721542	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005439\|Ga0070711_100695586	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005456\|Ga0070678_102110952	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005548\|Ga0070665_100161990	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300005548\|Ga0070665_101698577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300005566\|Ga0066693_10269670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300005576\|Ga0066708_10076539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1939	Open in IMG/M
3300005598\|Ga0066706_11380599	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005834\|Ga0068851_10784269	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300006028\|Ga0070717_10128144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2180	Open in IMG/M
3300006028\|Ga0070717_10360786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1300	Open in IMG/M
3300006034\|Ga0066656_10228760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1191	Open in IMG/M
3300006057\|Ga0075026_100991406	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006175\|Ga0070712_100669879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300006237\|Ga0097621_101255052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300006791\|Ga0066653_10560502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	578	Open in IMG/M
3300006791\|Ga0066653_10733003	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300006800\|Ga0066660_10944999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300007788\|Ga0099795_10119065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1054	Open in IMG/M
3300007788\|Ga0099795_10477101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300009143\|Ga0099792_10156516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1260	Open in IMG/M
3300009176\|Ga0105242_10788488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	939	Open in IMG/M
3300010048\|Ga0126373_10794964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1008	Open in IMG/M
3300010304\|Ga0134088_10273178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300010329\|Ga0134111_10333014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300010373\|Ga0134128_12137110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300010373\|Ga0134128_12234379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300012202\|Ga0137363_10417586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1119	Open in IMG/M
3300012206\|Ga0137380_11167159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	655	Open in IMG/M
3300012285\|Ga0137370_10194207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1189	Open in IMG/M
3300012349\|Ga0137387_10609638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300012354\|Ga0137366_10889952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300012355\|Ga0137369_10420628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	960	Open in IMG/M
3300012355\|Ga0137369_10709372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300012358\|Ga0137368_10762111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300012361\|Ga0137360_10610421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	934	Open in IMG/M
3300012362\|Ga0137361_10157027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2038	Open in IMG/M
3300012362\|Ga0137361_11089429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300012362\|Ga0137361_11524214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300012363\|Ga0137390_10795757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300012683\|Ga0137398_10593922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	765	Open in IMG/M
3300012685\|Ga0137397_10593968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	824	Open in IMG/M
3300012685\|Ga0137397_10761486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	718	Open in IMG/M
3300012883\|Ga0157281_1091793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	538	Open in IMG/M
3300012922\|Ga0137394_10277085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1434	Open in IMG/M
3300012922\|Ga0137394_10432850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1120	Open in IMG/M
3300012923\|Ga0137359_11637380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300012924\|Ga0137413_10920092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300012960\|Ga0164301_10110175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1602	Open in IMG/M
3300012960\|Ga0164301_11400508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300012972\|Ga0134077_10590678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300012984\|Ga0164309_11184807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300012984\|Ga0164309_11489268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300012986\|Ga0164304_10237770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1213	Open in IMG/M
3300013297\|Ga0157378_11249926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300013297\|Ga0157378_13139245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300014166\|Ga0134079_10184209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	865	Open in IMG/M
3300014166\|Ga0134079_10224612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300014969\|Ga0157376_10037431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3939	Open in IMG/M
3300015357\|Ga0134072_10053071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1134	Open in IMG/M
3300015372\|Ga0132256_103838046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	505	Open in IMG/M
3300015373\|Ga0132257_101232165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	948	Open in IMG/M
3300015373\|Ga0132257_102401822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300015374\|Ga0132255_101853753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	917	Open in IMG/M
3300015374\|Ga0132255_101906583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	904	Open in IMG/M
3300015374\|Ga0132255_104726036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300016422\|Ga0182039_10391619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1177	Open in IMG/M
3300017654\|Ga0134069_1064233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1166	Open in IMG/M
3300018000\|Ga0184604_10073230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1005	Open in IMG/M
3300018066\|Ga0184617_1107610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300018067\|Ga0184611_1018067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2137	Open in IMG/M
3300018072\|Ga0184635_10255302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300018482\|Ga0066669_12092001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300019866\|Ga0193756_1050157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300019875\|Ga0193701_1000865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5097	Open in IMG/M
3300019885\|Ga0193747_1001220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7155	Open in IMG/M
3300019886\|Ga0193727_1067579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1113	Open in IMG/M
3300020001\|Ga0193731_1111697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	699	Open in IMG/M
3300021411\|Ga0193709_1042575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1071	Open in IMG/M
3300025915\|Ga0207693_10362531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1134	Open in IMG/M
3300025915\|Ga0207693_10704125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300025916\|Ga0207663_11390946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300025920\|Ga0207649_11082268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300025934\|Ga0207686_10588041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	874	Open in IMG/M
3300025938\|Ga0207704_10312627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1208	Open in IMG/M
3300025939\|Ga0207665_10544078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300025960\|Ga0207651_11728779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300026089\|Ga0207648_11129644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	735	Open in IMG/M
3300026121\|Ga0207683_12146614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300026548\|Ga0209161_10182810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1181	Open in IMG/M
3300026548\|Ga0209161_10513154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300026557\|Ga0179587_10244613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1147	Open in IMG/M
3300027435\|Ga0207553_1004667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300027903\|Ga0209488_10646766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300028379\|Ga0268266_10245114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1655	Open in IMG/M
3300028592\|Ga0247822_10510338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300028708\|Ga0307295_10047761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1101	Open in IMG/M
3300028819\|Ga0307296_10519480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300028881\|Ga0307277_10056187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1611	Open in IMG/M
3300028885\|Ga0307304_10596764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300030844\|Ga0075377_11779432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300030916\|Ga0075386_12216138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300031057\|Ga0170834_101261160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	566	Open in IMG/M
3300031057\|Ga0170834_110493859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300031231\|Ga0170824_106833228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300031474\|Ga0170818_111068348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300031474\|Ga0170818_114025010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300031941\|Ga0310912_10089087	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300031996\|Ga0308176_11054834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.34%
Host-Associated	Host-Associated	22.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.44%
Plants	Host-Associated → Plants	22.66%
Aquatic	Environmental → Aquatic	3.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.16%
Sediment	Environmental → Aquatic → Sediment	3.91%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.62%
Loam	Environmental → Terrestrial → Soil → Loam	7.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.34%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.12%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027435	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G05K3-12 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_02924220	2140918007	Soil	MRKAQLLICPILLLFCLPSFAQESARGGSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIELKGRFAPFVYHNRGMLYLHRAKASQDRQSRIADLQHAIDDFQTSIRLGA
JGI1027J12803_1010284541	3300000955	Soil	MRKAHLLICPVLLLFCPPGFAQENSRNGSEKQDAPKVIATDDMKLAMKAGKLEAAGKYDEALKLYAQAIELKGRFTPFVYHNRGMLYLHWAKASQDRQSRIADLQHAIDDF
JGI1027J12803_1017444352	3300000955	Soil	MRKAHLLICSVLLLFCLPISGQESSRGGNAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFAPFVYHNRGMLYLHRAKASQDRQSRIADLQHAIDDFQTSIVLVQLPRTN*
JGI25390J43892_101056541	3300002911	Grasslands Soil	MRKAHLLICPVLLLFCPPSFAQESSRGGSAKQDAPKVIETGDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHN
Ga0062589_1007925981	3300004156	Soil	MRKAHLLICPVLLLFCPPGFAQETSRNGSAKQDAPKVIATDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRVADLQHAIDDFQTSIRLGAA
Ga0063356_1031132441	3300004463	Arabidopsis Thaliana Rhizosphere	MGKAHLFICPVLLLFCPPGFAQESSRGGSANPDTPKVIATEDMKLAMKASKLETAGKYDEALKVYAQAIELKGRFTPFVYHNRGMLYLHRAKASKDRQSRIADLQHAI
Ga0062594_1032069991	3300005093	Soil	MRRAHLFIGPLLLLFFPASFAQKNSHSGSAKQEAPKVIATDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFV
Ga0066809_101897061	3300005168	Soil	MRKAHLLICPVLLLFCAPSFAQENSGNGSAKQDAPKVIATDDMKLAMKAGKLESAGKYNEALRVYAQAIDLKGRFT
Ga0066675_106572731	3300005187	Soil	LLICPVLLLFFWPPGFAQESSRGGSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFT
Ga0065714_103378972	3300005288	Miscanthus Rhizosphere	LCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAI
Ga0065715_103197692	3300005293	Miscanthus Rhizosphere	MRKAPLVICAVLLFVRRPSFAQESSRGGSAKPDAPKVIATDDMKLSMTAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGM
Ga0065715_108141052	3300005293	Miscanthus Rhizosphere	MRKARLLICPVLLLFCLPSFAQESARGGSAKQDTPKVIETDDMKLAMKAGKLQTAGKYDEALKLYAQAIDLKGRFTPFVYH
Ga0065705_100121671	3300005294	Switchgrass Rhizosphere	MRKAHLLICPVLLLFSPPSFAQESSHSGSAKQDAPKVIATDDMKLAMRAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKGSQDRQS
Ga0065705_103039312	3300005294	Switchgrass Rhizosphere	MRKAHLLICPVLLLFCPPGFAQHSSRGGSAKQDAPKVIETEDMKLAIKAVKLETAGKYDEAFKLYAQAVDVKGRFTPFVYHNRGMLYLHRAKTSQDRQSRIADLQHAIDTSRLPFASAQLPRKN*
Ga0065707_105353451	3300005295	Switchgrass Rhizosphere	MRKTHLLICAVLLLFCPPGFAQESARGGSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQS
Ga0070683_1010941461	3300005329	Corn Rhizosphere	MRKAHLCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLQRAKAAQDRQSRIADLQHAIDDFQT
Ga0070670_1009738232	3300005331	Switchgrass Rhizosphere	LLICPLLLLFCPPGFAQDSSRGKSATQDAPKVIATDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVY
Ga0068868_1006500401	3300005338	Miscanthus Rhizosphere	MRKAHLCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQHAI
Ga0070661_1004728302	3300005344	Corn Rhizosphere	LCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVY
Ga0070713_1007215422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRKAHLFICPVLLLFSALGFAQESSRGGSAKREAPRVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHR
Ga0070711_1006955861	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRKAHLLICPVLLLFCPPSFAQESSRSGSAKQATPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQHAIDDFQT
Ga0070678_1021109522	3300005456	Miscanthus Rhizosphere	MRRAHLFIGPLLLLFFPASFAQKNSHSGSAKQEAPKVIATDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQH
Ga0070665_1001619903	3300005548	Switchgrass Rhizosphere	MRKAHLLICPLLLLFCPPGFAQDSSRGKSATQDAPKVIATDDMKLAMKAGKLESAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIAD
Ga0070665_1016985772	3300005548	Switchgrass Rhizosphere	MRKANLVICPVLLLFCVPSFAQEKSRGGTAKQDSPKVIATDDMKLAMKAGKLETAGKYDDALKLYAQAIDLKGRFTPFVYHNRGMLFLHRAKASQDRQSRIADLQHAIDDFQTSIRL
Ga0066693_102696702	3300005566	Soil	MRKAHLLICSVLLLFCLPISGQESSRGGNAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFAPFVY
Ga0066708_100765391	3300005576	Soil	MRKAHLLICPVLWLFCLPSFAQERPRGGSAKQDAPKVIATEDMKLAMKAAKLETAGKYDEALKVYAQAIGLKGRYAPFVYHNRGMLYLHRAKAS
Ga0066706_113805991	3300005598	Soil	MRKAHLLICPLLLLFCPPSFAQESSRGGSAKQDAPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASKDRQSRIA
Ga0068851_107842692	3300005834	Corn Rhizosphere	LCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLQRAKAAQDRQSRIADLQHAIDDFQTSI
Ga0070717_101281444	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRKAHLFICPVLLLFSALGFAQASSRGGSAKQEAPRVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLRHAIDDFQTSIRLGA
Ga0070717_103607861	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAHLIICPVLLLFCALSFAQENSHSGSAKQGAPKVIATDDMKLAMKAGKLETAGKYDEALRLYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQ
Ga0066656_102287602	3300006034	Soil	MTVSQLNPLDPEIRRRAAMRKAYLFVCPVLVLFCQPTFAQENSRSGSATQGSPRVIQTDDMKLAMKAHELQAAGKYDEALKLYGQAIALNGRFTPFVYHNRGMLYLNRAKASQDPQSRIADLQHA
Ga0075026_1009914062	3300006057	Watersheds	LLICPILLLFCLPSFAQESARGGSAKHDAPKVIETDDMKLAMKASKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGM
Ga0070712_1006698792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRKAHLLICPVLFLFCPPGFAQESSRKGSAKQETPKVIETDDIKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAQASQDRQSRIADLQHAIDDFQT
Ga0097621_1012550522	3300006237	Miscanthus Rhizosphere	LLICAVLLLFCSPSFAQESSRDGSAKQDTPKVIATDDMKLAMKAGKLETAGKYNEALKVYAQAIDLKGRFTPFVYHNRACYTFT
Ga0066653_105605021	3300006791	Soil	MRKAHLLICPVLLLFSPLGFAQENSRSRSAKQDAPKVIATDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPF
Ga0066653_107330031	3300006791	Soil	MRKAHLLICSVLLLFCLPISGQESSRGGNAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFAPFMYHNRGMLYLHRAKASQDRQSRIADLQH
Ga0066660_109449992	3300006800	Soil	MRKAHLLICPVLWLFCLPSFAQERPRGGSAKQDAPKVIATEDMKLAMKAGKLETAGRYDEALKVYAQAIELKGRFTPFVY
Ga0099795_101190652	3300007788	Vadose Zone Soil	MRKTHLLICAALLLFCPPGFAQDSSRGRSAKQAAPKVIETEDMKLAMKAGKLKRAGKYDEALKLYAQGIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQRAIDDFQASI
Ga0099795_104771011	3300007788	Vadose Zone Soil	MRKAHLFICPVLLLFSALGFAQERSRGGSAKQEAPRVIETDDMKLAMKAGKLERAGKYDEALKVYAQAIELKGRFAPFVYHNRGMLYLHRAKASQDRQSRIAD
Ga0099792_101565161	3300009143	Vadose Zone Soil	MRKAHLVICPFLLLLLATGFAQESARGGSAKQNAPKVIETEDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFAPFVYHNRGMLY
Ga0105242_107884881	3300009176	Miscanthus Rhizosphere	MRKAHLCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLQRAK
Ga0126373_107949641	3300010048	Tropical Forest Soil	MSAMRLFNWPVVLLFCSLSLAQESSHNGSVKQAAPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLY
Ga0134088_102731781	3300010304	Grasslands Soil	MRKAHLLICPLLLLFCPPGFAQDSSRGRSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASRDRQSRIADLQHAIDDFQTSIR
Ga0134111_103330141	3300010329	Grasslands Soil	MRKAHLLICPVLLLSCLPGFAQDSSRGASAKQDAPKVIETEDMKLAMKAGKLETAGKYDEALKLYAQAIDLRCRFTPFVYHNRGVLYLHRAKA
Ga0134128_121371102	3300010373	Terrestrial Soil	MRRAHLFIGPLLLLFFPASFAQKNSHSGSAKQEAPKVIATDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQHAIDDFQTSIR
Ga0134128_122343792	3300010373	Terrestrial Soil	MRKAHLFICLILLLFCLPTFAQESSRTGSAKQDAPRVIETDDMKLAMKASKAKASGNYDEALKLYAEAIELKGRFTPFVYQNRGMLYLHRAKAST
Ga0137363_104175861	3300012202	Vadose Zone Soil	MSKTHLFIWPVLLLFCSLSFAQERSHSGSAKQDAPRVIETDDMKLAMKAGQLETAGNYDEALKLYAQAIDLKGRFTPFVYHNRGMLYL
Ga0137380_111671591	3300012206	Vadose Zone Soil	MRKAHLLICCILLLFCPLISAQESSRGRSAKQDAPKVIETEDMKLAMKAGKLQTAGKYGEALKLYAQAIDLK
Ga0137370_101942072	3300012285	Vadose Zone Soil	MSKTHLFIWPVLLLFCSLSFAQERSHSGSAKQDAPRVIETDDMKLAMKAGKLETAGKYDEALNVYAQAIDLKGRFTPFVYHNRGMLYLHRA
Ga0137387_106096382	3300012349	Vadose Zone Soil	MSGFAQESSRGGSAKQDAPKVIETGDMKLAMKAGKLETAGKYEEALKVYAQAIDLKGRFTPFVYH
Ga0137366_108899521	3300012354	Vadose Zone Soil	MRKAHLLICPVLLLFCPPGFAQESSRGRSAKQDAPKVIETEDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTPFVYH
Ga0137369_104206282	3300012355	Vadose Zone Soil	MRKAHLLICPVLLLFCLPGFAQESSRGGSAKQDAPKVIETEDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTPFVYHNRGMLY
Ga0137369_107093722	3300012355	Vadose Zone Soil	MRKAHLLICPVLLLFCPPSFAQESSRGGSAKQDAPKVIETGDMKLAMKAGKLETAGKYEEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKA
Ga0137368_107621112	3300012358	Vadose Zone Soil	MRKAHLLICPVLLLFCLPGFAQESSRGGSAKQDAPKVIKTEDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTPFVYHNRGMLYLHRAKASKDRQSRIADLQHAIDDFQTSIRLGAA
Ga0137360_106104212	3300012361	Vadose Zone Soil	MRKAHLLICPVLLLFWPLGFAQESSRGGSAKQDAPKVIETGDMKLAMKAGKLETAGKYEEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQHAIDDFQASIRLGA
Ga0137361_101570274	3300012362	Vadose Zone Soil	MSKTHLFIWPVLLLFCSLSFAQERSHSGSAKQDAPRVIETDDMKLAMKAGQLETAGKYDEALKLYAQAIDLKGRFT
Ga0137361_110894292	3300012362	Vadose Zone Soil	MRKTHLLICAALLLFCPPGFAQDSSRGGSAKQAAPKVIETEDMKLAMKAGKLERAGKYDEALKLYAQAIDLKGRFTPFVYHNRGMLYLHMAKAFQDRQ
Ga0137361_115242142	3300012362	Vadose Zone Soil	LFCPPTFAQENSRSGSAKQDSPRVIQTDDMKLAMKAGQMAAAGKYDEALKLYGQAIALNGRFTPFVYHNHNRGMLYLHRAKASQDPQSRIADLQRAIADQFSGDCRGMPNQCCGLIQF*
Ga0137390_107957572	3300012363	Vadose Zone Soil	LLFCPPGFAQESFRAGSAKPDAPKVIATDDMKLAMKAGKLQTAGEYDEALKEYAQAIDLKGRFTPFVYHNRGML
Ga0137398_105939221	3300012683	Vadose Zone Soil	MRKAHLLICPVLLLFCPPGFAQDSSRGGSAKQDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKSRFTPF
Ga0137397_105939681	3300012685	Vadose Zone Soil	MRKAHLLICPVLLLFCPLGFAQDSSRGGSAKQDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKG
Ga0137397_107614861	3300012685	Vadose Zone Soil	MSKTHLFIWPVLLLFCSLSFAQERSHSGSAKQDTPKVIETDDMKLAMKAGQLETAGNYDEALKLYAQAIDLKGRF
Ga0157281_10917931	3300012883	Soil	MRKAHLCGCAVLLLFCAPSSAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTP
Ga0137394_102770852	3300012922	Vadose Zone Soil	MRKAHLLICSVLLLFCPPGFAQESSRGGSAKQDAPKVIETDDMKLAMRAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQHA
Ga0137394_104328502	3300012922	Vadose Zone Soil	VEMRKAHLLICPVLLLFCPPGFAQDSSRGGSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQHA
Ga0137359_116373802	3300012923	Vadose Zone Soil	MRKAHLVIYPFLLLLLATGFAQESSRGGSAKQDTPKVIETDDMKLAMKAGKLKTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRI
Ga0137413_109200922	3300012924	Vadose Zone Soil	MRKAHLLICPVLLLFCPPGFAQEGSRGGSAKQDAPKVIETEDMKLAMKAGKLETAGKYDEALKLYAQAITLKGRFTPFVYHN
Ga0164301_101101752	3300012960	Soil	MRKAHLLICPVLLLFCTLSFAQESSRSGSAKHDAPKVIATDDMKLSMKAGKLKTDGKYDEALKVYAQAIDVNGRFTPFVYHNRGMLYLNRAK
Ga0164301_114005081	3300012960	Soil	MRKARLLICPVLLLFCLPSFAQESARGGSAKQDAPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQHAIDD
Ga0134077_105906782	3300012972	Grasslands Soil	MRKAHLLICPVLLLFFWPPGFAQESSRGGSAEQDAPKVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAK
Ga0164309_111848071	3300012984	Soil	MRKAHLFICPVLLLFSALGFAQASSRGGSAKQEAPRVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQD
Ga0164309_114892682	3300012984	Soil	MRKAHLLICPLLLLFCPPGFAQDSSRGKSATQDAPKVIATDDMKLAMKAGKLESAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLNRAKASQDRQSRIADLQHAIDDFQTS
Ga0164304_102377701	3300012986	Soil	VDRKKAHLLICPVLLLFRPPSFAQESPRGGSAKQDAPKVIATDDMKLSMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLNRAKASQDRQSRIADLQH
Ga0157378_112499261	3300013297	Miscanthus Rhizosphere	MRKARLLICPVLLLFCLPSFAQESARGGSAKQDAPKVIETDDMKLAMKAGKLQTAGKYDEGLKVYAQAIDLKGRFTPFVYHNRGM
Ga0157378_131392452	3300013297	Miscanthus Rhizosphere	VEMRKAHLLICAVLLLFCSPSFAQESSRDGSAKQDTPKVIATDDMKLAMKAGKLETAGKYNEALKVYAQAIDVKGRFTPFVYHNR
Ga0134079_101842092	3300014166	Grasslands Soil	MRKAHLLICPVLLLFFWPPGFAQESSRGGSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDR
Ga0134079_102246122	3300014166	Grasslands Soil	MTVSQLNPLDPEIRRRAAMRKAYLFVCPVLVLFCQPTFAQEQGSPRVIQTDDMKLAMKAHELQAAGKYDEALKLYGQAIALNGRFTPFVYQNR
Ga0157376_100374315	3300014969	Miscanthus Rhizosphere	MRKAHLCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLQRAKAAQDRQSRIADLQHAIDDFQTS
Ga0134072_100530712	3300015357	Grasslands Soil	MRKAHLLICPVLLLFCPPSFAQESSRGGSAKQDAPKVIETEDMKLAMKAGKLETAGKYDEALKLYAQAIDLRCRFTPFVYHNRGVLYLHRA
Ga0132256_1038380462	3300015372	Arabidopsis Rhizosphere	VEMMKAHLLICAVFLLFCARSFAQESSRSGSAKQDTPKVIETDDMKLAMKASKLQTAGKYDEALKVYAQAIDLKGRFTPFV
Ga0132257_1012321652	3300015373	Arabidopsis Rhizosphere	VEMMKAHLLICAVFLLFCARSFAQESSRSGSAKQDTPKVIETDDMKLAMKASKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHN
Ga0132257_1024018222	3300015373	Arabidopsis Rhizosphere	MRKAHLCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHN
Ga0132255_1018537532	3300015374	Arabidopsis Rhizosphere	VEMMKAHLLICAVFLLFCARSFAQESSRSGSAKQDTPKVIETDDMKLAMKASKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRTKASR
Ga0132255_1019065832	3300015374	Arabidopsis Rhizosphere	MSKTHLFICPVFLLFSALAFGQQGSHGGNRKQDPARVIETDDMKLGMKAAKLEAARKYDEALKVYAQAIDLKGRFTPF
Ga0132255_1047260362	3300015374	Arabidopsis Rhizosphere	MRKAHLLICPVLLLFCTLSFAQESSRSGSAKHDAPKVIATDDMKLSMKAGKLQTAGKYDKALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRI
Ga0182039_103916192	3300016422	Soil	MSKTHLFIWPVLSLLCSLSFAQESSHSGSAKQGAPRVIETDDMKLAMKASRLEAAGKYDEALKVYAQDIDLKGRFTPF
Ga0134069_10642332	3300017654	Grasslands Soil	MTVSQLNPLDPEIRRRAAMRKAYLFVCPVLVLFCQPTFAQENSRSGSATQGSPRVIQTDDMKLAMKAHELQAAGKYDEALKLYGQAIALNGRFTPFVYHNRGMLYLHRAKASQDPQSRIADLQR
Ga0184604_100732302	3300018000	Groundwater Sediment	MMKAHLLICAVLLLSCPPGFAQESSRGGSAKQDAPKVIETEDMKLAMKAGKLETGGKYDEALKVYAQAIDLKG
Ga0184617_11076101	3300018066	Groundwater Sediment	LLICPVLLLFWPPGFAQESSRGGSAKQDAPKVIETEDMKLATKAGKLETAGKYNEALKLYAQAIDLKGRFTPFVYHNRG
Ga0184611_10180671	3300018067	Groundwater Sediment	MRKAHLLICPVLLLFCPPGFAQDSSRGGSAKQDAPRVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSQIADLQHA
Ga0184635_102553022	3300018072	Groundwater Sediment	LLICPVLLLFCPPGFAQESSRSGSAKQDAPRVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDMKGRFTPFVYHNR
Ga0066669_120920011	3300018482	Grasslands Soil	MRKAYLFICPVLLLFCPPTFAQENSRSGSAKQDSPRVIQTDDMKLAMKAGQMAAAGKYDEALKLYGQAIALNGRFTPFVYHNRGMLYLHRAKASQDPQSRI
Ga0193756_10501572	3300019866	Soil	LLICPVLLLFCPPGFAEDSSRGGSAKQDAPKVIATDDMKLAMKAGKLQTAGKYVEALKFYAQAIDLKGRFTPFVYHNRGMLYLHRA
Ga0193701_10008651	3300019875	Soil	VDMRKAHLLICPVLLLFCTLSLAQESPRGGSAKQDVPKVIETDDMKLAMKAGKLQTSGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKSSQDRQSRIAALQHAIDDF
Ga0193747_10012201	3300019885	Soil	MRKTHLLICAVLLLFCPPGFAQESSRGGSAKQDAPKVIETEDMKLAMKAGKLEKAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHR
Ga0193727_10675792	3300019886	Soil	MRKTHLLICAVLLLFCPAGFAQESSRGGSAKQDARKVIETEDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRI
Ga0193731_11116972	3300020001	Soil	MRKTHLLICAALLLFCPPGFAQESSRAGSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTP
Ga0193709_10425751	3300021411	Soil	MRKTHLLICAALLLFCPPGFAQESSRAGSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTPFVYHNRGML
Ga0207693_103625312	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRKARLLICPILLLFCLPSFAQESARGGSAKQDAPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIKLKGRFAPFVYHNRGMLYLNRAKASQDRQSRIADLQHAIDDFQASIRLGAA
Ga0207693_107041252	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRKAHLLICPVLFLFCPPGFAQESSRKGSAKQETPKVIETDDIKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQ
Ga0207663_113909462	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRKAHLFICPVLLLFSALGFAQESSRGGSAKQEAPRVIETDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQD
Ga0207649_110822681	3300025920	Corn Rhizosphere	LCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLQRAKAAQDRHSRIADLQHAIDDFQTSIR
Ga0207686_105880411	3300025934	Miscanthus Rhizosphere	LCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLQRAK
Ga0207704_103126271	3300025938	Miscanthus Rhizosphere	MRKAHLCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVY
Ga0207665_105440781	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRKAHLLICPLLLLFCPPGFAQDSSRGKSATQDAPKVIATDDMKLAMKAGKLESAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQ
Ga0207651_117287791	3300025960	Switchgrass Rhizosphere	MTQARLLICAVLLLFCAPSFAQENSRSGSAKQDAPKVIATDDMKLAMKASKLETAGKYDEALKVYAQAIDLKGSFTPFVYHNRGMLYLHR
Ga0207648_111296441	3300026089	Miscanthus Rhizosphere	LCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLQRA
Ga0207683_121466142	3300026121	Miscanthus Rhizosphere	LFIGPLLLLFFPASFAQKNSHSGSAKQEAPKVIATDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVY
Ga0209161_101828101	3300026548	Soil	MRKAYLFICPVLLLFCPPTFAQENSRSGSAKQDSPRVIQTDDMKLAMKAGQMAAAGKYDEALKLYGQAIALNGRFTPFVYHNRGMLYLHRAKASQD
Ga0209161_105131541	3300026548	Soil	MRKAHLLICPLLLLFCPPSFAQESSRGGSAKQDAPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKAS
Ga0179587_102446131	3300026557	Vadose Zone Soil	LLICPVLLLFCLPTFAQERPRGGSAKQDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGLF
Ga0207553_10046672	3300027435	Soil	LCGCAVLLLFCAPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLQ
Ga0209488_106467662	3300027903	Vadose Zone Soil	MRKAHLLICPLLLLFCPPSFAQESARGGSAKQNAPKVIETEDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQRA
Ga0268266_102451141	3300028379	Switchgrass Rhizosphere	MRKAHLLICPLLLLFCPPGFAQDSSRGKSATQDAPKVIATDDMKLAMKAGKLESAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADLQHAIDDFQTS
Ga0247822_105103381	3300028592	Soil	LLICPVLLLFCPPSFAQESSRSGSAKQDAPKVIATDDMKLAMKAGKLQTAGKYEEALKVYAQAIDLKGRFTPFVY
Ga0307295_100477612	3300028708	Soil	MRKAHLLICPVLLLFCQPSFAQESSRSGSAKQDTPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLH
Ga0307296_105194801	3300028819	Soil	LLICSVLLLFCPPGFAQESSRGGSAKQDAPKVIETDDMKLAMRAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLH
Ga0307277_100561872	3300028881	Soil	MRKAHLLICPVLLLFSLPSFAQENTRGGSGKQDAPKVIATEDMNLAMKASKLETAGKYDEALRVYAQAIGLKGRYTPFVYHNRGMLYLHRAKASQD
Ga0307304_105967642	3300028885	Soil	LLICPVLLLFCQPSFAQESSRSGSAKQDTPKVIETDDMKLAMKAGKLQTAGKYDEALKVFAQAIDLKGRFTPFVYH
Ga0075377_117794321	3300030844	Soil	LLICPVLLLFCPPGFAQESSRSGSAKQDTPKVIATDDMKLAMKAGKLQTAGKYDGALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKA
Ga0075386_122161382	3300030916	Soil	MRKAHLLICPVLLLFCPPGFAQESSRSGSAKQDTPKVIATDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIAD
Ga0170834_1012611601	3300031057	Forest Soil	MRKAHLLFCAVLLLFRQLSFAQETSRDGSVKQDSPKVIATDDMKLAMKAGKLQTAGKYDEALKLYAQAIDLKGRFTPF
Ga0170834_1104938591	3300031057	Forest Soil	MSRTRLFIWPVVLLFCSLSFAQESSHSGSVKQGAPKVIETDDMKLAMKAGKLETAGKYHDALKLYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRESRIADLQHAIDD
Ga0170824_1068332282	3300031231	Forest Soil	MRKAHLFICPVLLLFCPPGFAQESSRTGSAKQDAPKVIETDDMKLAMKAGKLETAGKYDEALKLYAQAIDLKGRFTPFVYHNRGMLYLHRAKASQDRQSRIADL
Ga0170818_1110683481	3300031474	Forest Soil	MRKAHFLICPILLFFWLPGFAQERSRNGSAKQNAPKVIATDDMKLAVKAGKLETSGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHR
Ga0170818_1140250101	3300031474	Forest Soil	MRKARLLICPVLLLFCLPSFAQESARGGSAKQDAPKVIETDDMKLAMKAGKLQTAGKYDEALKVYAQAIDLKGRFTPFVY
Ga0310912_100890871	3300031941	Soil	MSKTHLFIWPVLSLLCSLSFAQESSHSGSAKQGAPRVIETDDMKLAMKASRLEAAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLY
Ga0308176_110548341	3300031996	Soil	LCSCALLLLVSCPSFAQENSRSGSAKEDAPKVIATDDMKLAMKAGKLETAGKYDEALKVYAQAIDLKGRFTPFVYHNRGMLYLHRAKAAQDRQSRIAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064976

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences