Metagenome / Metatranscriptome Family F064915

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064915
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	70 residues
Representative Sequence	MNISYLIYQAERPRSVAEQREADVRAGEMAAAVARLGRSLRHAVTGKQDARREGQRPAGATVSCAVPRPR
Number of Associated Samples	83
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.25 %
% of genes near scaffold ends (potentially truncated)	25.78 %
% of genes from short scaffolds (< 2000 bps)	79.69 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.188 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.719 % of family members)
Environment Ontology (ENVO)	Unclassified (33.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.844 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.06% β-sheet: 0.00% Coil/Unstructured: 46.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF03176	MMPL	8.00
PF13560	HTH_31	7.20
PF03704	BTAD	5.60
PF13191	AAA_16	4.00
PF00196	GerE	3.20
PF05721	PhyH	2.40
PF13657	Couple_hipA	1.60
PF11716	MDMPI_N	1.60
PF13936	HTH_38	0.80
PF03992	ABM	0.80
PF13784	Fic_N	0.80
PF04672	Methyltransf_19	0.80
PF11796	DUF3323	0.80
PF08309	LVIVD	0.80
PF03795	YCII	0.80
PF00795	CN_hydrolase	0.80
PF05685	Uma2	0.80
PF01522	Polysacc_deac_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	8.00
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	8.00
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	5.60
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	5.60
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.40
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.80
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.80
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.19 %
Unclassified	root	N/A	32.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.19 %
Unclassified	root	N/A	32.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.19 %
Unclassified	root	N/A	32.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.94 %
Unclassified	root	N/A	32.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	60.94 %
Unclassified	root	N/A	32.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	50.00 %
Unclassified	root	N/A	32.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	35.94 %
Unclassified	root	N/A	32.81 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	3.12 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.56 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.78 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	35.94 %
Unclassified	root	N/A	32.81 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	3.12 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.56 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	35.94 %
Unclassified	root	N/A	32.81 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	3.12 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	1.56 %
Desulfohalovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfohalovibrio	0.78 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	35.94 %
Unclassified	root	N/A	32.81 %
Frankia inefficax	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia inefficax	2.34 %
Streptacidiphilus neutrinimicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus neutrinimicus	1.56 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.78 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.78 %
Desulfohalovibrio reitneri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfohalovibrio → Desulfohalovibrio reitneri	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	35.94 %
Unclassified	root	N/A	32.81 %
Frankia inefficax	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia inefficax	2.34 %
Streptacidiphilus neutrinimicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus neutrinimicus	1.56 %
Micromonospora sp. C31	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. C31	0.78 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.78 %
Desulfohalovibrio reitneri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfohalovibrio → Desulfohalovibrio reitneri	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100144508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2248	Open in IMG/M
3300005327\|Ga0070658_10015920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6014	Open in IMG/M
3300005337\|Ga0070682_101486763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfohalovibrio → Desulfohalovibrio reitneri	582	Open in IMG/M
3300005435\|Ga0070714_100408909	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300005435\|Ga0070714_100722914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	962	Open in IMG/M
3300005437\|Ga0070710_11379515	Not Available	526	Open in IMG/M
3300005548\|Ga0070665_101123124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	797	Open in IMG/M
3300005548\|Ga0070665_101567406	Not Available	667	Open in IMG/M
3300005610\|Ga0070763_10169418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1151	Open in IMG/M
3300005610\|Ga0070763_10193450	Not Available	1082	Open in IMG/M
3300005610\|Ga0070763_10771479	Not Available	567	Open in IMG/M
3300005617\|Ga0068859_102859958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	529	Open in IMG/M
3300006028\|Ga0070717_10676548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus neutrinimicus	937	Open in IMG/M
3300006176\|Ga0070765_100568075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. C31	1068	Open in IMG/M
3300006755\|Ga0079222_12675509	Not Available	502	Open in IMG/M
3300006806\|Ga0079220_10604179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	780	Open in IMG/M
3300006954\|Ga0079219_10141910	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300007982\|Ga0102924_1001657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25346	Open in IMG/M
3300007982\|Ga0102924_1060897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2124	Open in IMG/M
3300009545\|Ga0105237_11432180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300010360\|Ga0126372_12709903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	548	Open in IMG/M
3300010371\|Ga0134125_10127042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2838	Open in IMG/M
3300010373\|Ga0134128_12963189	Not Available	522	Open in IMG/M
3300010396\|Ga0134126_10357520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus neutrinimicus	1702	Open in IMG/M
3300010866\|Ga0126344_1201672	Not Available	798	Open in IMG/M
3300010869\|Ga0126359_1211822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	1656	Open in IMG/M
3300010876\|Ga0126361_10099994	Not Available	766	Open in IMG/M
3300010876\|Ga0126361_10966228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300010880\|Ga0126350_10252977	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300012683\|Ga0137398_10638916	Not Available	737	Open in IMG/M
3300012924\|Ga0137413_10508809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	887	Open in IMG/M
3300012924\|Ga0137413_11771423	Not Available	509	Open in IMG/M
3300013102\|Ga0157371_10657001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	783	Open in IMG/M
3300014169\|Ga0181531_10047612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2503	Open in IMG/M
3300014968\|Ga0157379_11288058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	705	Open in IMG/M
3300015264\|Ga0137403_10664101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	904	Open in IMG/M
3300019887\|Ga0193729_1127778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	940	Open in IMG/M
3300020070\|Ga0206356_11455055	Not Available	510	Open in IMG/M
3300020081\|Ga0206354_10536271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia inefficax	967	Open in IMG/M
3300020580\|Ga0210403_11294785	Not Available	557	Open in IMG/M
3300020582\|Ga0210395_10519147	Not Available	896	Open in IMG/M
3300020583\|Ga0210401_10115372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2520	Open in IMG/M
3300020583\|Ga0210401_10223708	Not Available	1741	Open in IMG/M
3300020583\|Ga0210401_10389838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1255	Open in IMG/M
3300020583\|Ga0210401_11057011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	670	Open in IMG/M
3300021170\|Ga0210400_10036440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3812	Open in IMG/M
3300021178\|Ga0210408_10633426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	845	Open in IMG/M
3300021180\|Ga0210396_10080981	All Organisms → cellular organisms → Bacteria	2949	Open in IMG/M
3300021180\|Ga0210396_10086950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2835	Open in IMG/M
3300021180\|Ga0210396_11259343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	617	Open in IMG/M
3300021180\|Ga0210396_11499317	Not Available	554	Open in IMG/M
3300021181\|Ga0210388_10341402	Not Available	1317	Open in IMG/M
3300021181\|Ga0210388_10481626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1090	Open in IMG/M
3300021181\|Ga0210388_11018739	Not Available	709	Open in IMG/M
3300021401\|Ga0210393_10445473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1057	Open in IMG/M
3300021401\|Ga0210393_11391685	Not Available	561	Open in IMG/M
3300021402\|Ga0210385_10024901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3828	Open in IMG/M
3300021402\|Ga0210385_10089066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2132	Open in IMG/M
3300021402\|Ga0210385_10089066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2132	Open in IMG/M
3300021402\|Ga0210385_10784622	Not Available	730	Open in IMG/M
3300021402\|Ga0210385_10816789	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300021402\|Ga0210385_10848805	Not Available	701	Open in IMG/M
3300021403\|Ga0210397_10062983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2409	Open in IMG/M
3300021403\|Ga0210397_10321972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1140	Open in IMG/M
3300021404\|Ga0210389_10250649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia inefficax	1385	Open in IMG/M
3300021404\|Ga0210389_10276284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1315	Open in IMG/M
3300021404\|Ga0210389_10280215	Not Available	1305	Open in IMG/M
3300021404\|Ga0210389_11015731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	643	Open in IMG/M
3300021404\|Ga0210389_11266816	Not Available	566	Open in IMG/M
3300021405\|Ga0210387_10769045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	852	Open in IMG/M
3300021406\|Ga0210386_10134268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2058	Open in IMG/M
3300021406\|Ga0210386_10465942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1091	Open in IMG/M
3300021406\|Ga0210386_11040396	Not Available	697	Open in IMG/M
3300021406\|Ga0210386_11486506	Not Available	565	Open in IMG/M
3300021407\|Ga0210383_10805900	Not Available	804	Open in IMG/M
3300021420\|Ga0210394_10996583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	726	Open in IMG/M
3300021432\|Ga0210384_10216689	Not Available	1723	Open in IMG/M
3300021474\|Ga0210390_10077531	All Organisms → cellular organisms → Bacteria	2752	Open in IMG/M
3300021474\|Ga0210390_11096959	Not Available	647	Open in IMG/M
3300021475\|Ga0210392_10114195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1798	Open in IMG/M
3300021477\|Ga0210398_10709920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	813	Open in IMG/M
3300021479\|Ga0210410_10702479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	893	Open in IMG/M
3300021559\|Ga0210409_10545629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1025	Open in IMG/M
3300022467\|Ga0224712_10041456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1739	Open in IMG/M
3300022467\|Ga0224712_10176369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	961	Open in IMG/M
3300022530\|Ga0242658_1126309	Not Available	638	Open in IMG/M
3300022530\|Ga0242658_1132737	Not Available	627	Open in IMG/M
3300022557\|Ga0212123_10015637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9404	Open in IMG/M
3300022557\|Ga0212123_10211054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1429	Open in IMG/M
3300022726\|Ga0242654_10424952	Not Available	514	Open in IMG/M
3300025912\|Ga0207707_10479081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1063	Open in IMG/M
3300025914\|Ga0207671_11438787	Not Available	533	Open in IMG/M
3300025920\|Ga0207649_11330834	Not Available	568	Open in IMG/M
3300025929\|Ga0207664_10752859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	876	Open in IMG/M
3300025929\|Ga0207664_10967772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	763	Open in IMG/M
3300026116\|Ga0207674_10074139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3416	Open in IMG/M
3300026557\|Ga0179587_10143264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1484	Open in IMG/M
3300027528\|Ga0208985_1034455	Not Available	986	Open in IMG/M
3300027528\|Ga0208985_1034455	Not Available	986	Open in IMG/M
3300027528\|Ga0208985_1106749	Not Available	536	Open in IMG/M
3300027775\|Ga0209177_10112244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	880	Open in IMG/M
3300027817\|Ga0209112_10003507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4071	Open in IMG/M
3300027817\|Ga0209112_10061726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1161	Open in IMG/M
3300027817\|Ga0209112_10094453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia inefficax	960	Open in IMG/M
3300027855\|Ga0209693_10098516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1447	Open in IMG/M
3300027895\|Ga0209624_10047565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2743	Open in IMG/M
3300027905\|Ga0209415_10302491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1377	Open in IMG/M
3300027908\|Ga0209006_11076335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	635	Open in IMG/M
3300028906\|Ga0308309_11045908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	707	Open in IMG/M
3300030007\|Ga0311338_11865750	Not Available	539	Open in IMG/M
3300030520\|Ga0311372_10146547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4105	Open in IMG/M
3300030730\|Ga0307482_1033827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1158	Open in IMG/M
3300030730\|Ga0307482_1059044	Not Available	956	Open in IMG/M
3300030730\|Ga0307482_1059044	Not Available	956	Open in IMG/M
3300031708\|Ga0310686_100256409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7953	Open in IMG/M
3300031708\|Ga0310686_106523582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1372	Open in IMG/M
3300031708\|Ga0310686_110357328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3458	Open in IMG/M
3300031708\|Ga0310686_111903302	Not Available	747	Open in IMG/M
3300031715\|Ga0307476_10148050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1685	Open in IMG/M
3300031718\|Ga0307474_10051749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3032	Open in IMG/M
3300031815\|Ga0316045_122891	Not Available	583	Open in IMG/M
3300031823\|Ga0307478_10940045	Not Available	723	Open in IMG/M
3300031823\|Ga0307478_11344172	Not Available	593	Open in IMG/M
3300031962\|Ga0307479_10131131	All Organisms → cellular organisms → Bacteria	2451	Open in IMG/M
3300032515\|Ga0348332_12236981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1087	Open in IMG/M
3300032515\|Ga0348332_13602383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300032896\|Ga0335075_10019024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10171	Open in IMG/M
3300033547\|Ga0316212_1005055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1916	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.41%
Host-Associated	Host-Associated	8.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Plants	Host-Associated → Plants	8.59%
Aquatic	Environmental → Aquatic	3.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.12%
Peat	Environmental → Terrestrial → Peat	1.56%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.56%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.62%
Loam	Environmental → Terrestrial → Soil → Loam	17.97%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.91%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.12%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.56%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031815	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001445081	3300002245	Forest Soil	MNSNYLIYEAERPRSMTEQRETDARTGEFAAAVGRLGRSLRHPATGKRNARQGARRPVGATVTCAIPRPR*
Ga0070658_100159202	3300005327	Corn Rhizosphere	MNITYLIYQAERPRSTAEQREADARAGEMAAALARIGHSLRRPVTRKQAARWAARPPAIETIPCPVPRPR*
Ga0070682_1014867631	3300005337	Corn Rhizosphere	MNITYLIYQAERPRSAAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISCAVPRPR*
Ga0070714_1004089092	3300005435	Agricultural Soil	MNIAYLVYQAERPKGTLEQREADVRAGELAAAVARLGRSLRHAVTGGPNAGWGSQPPAIETISCAVPRPR*
Ga0070714_1007229142	3300005435	Agricultural Soil	MNITYLIYQAERPRSMAEQREADTRAGEMAASFARIGRSLRHQVSGRHGAGWTAQPPAIETISCAVPRPR*
Ga0070710_113795151	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNIAYLVYQAERPKGTLERREADVRAGELAAAVARLGRSLRHAVTGQPNAGWGSQPPAIETISCAVPRPR*
Ga0070665_1011231242	3300005548	Switchgrass Rhizosphere	MNITYLIYQAERPRSMAEQREADTRAGEMAASFARIGRSLRHQVSGRHGAGWTAQPPAIETISCAVP
Ga0070665_1015674061	3300005548	Switchgrass Rhizosphere	ITYLIYQAERPRSTAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISCAVPRPR*
Ga0070763_101694181	3300005610	Soil	MNISYLIYTAERPRSATEQREADVRAGELAAAVARLGHSLRHPVTGKRGARRPSTTTVSCAIPRPRQAAER*
Ga0070763_101934502	3300005610	Soil	MNISYLMYQAERPRNAAEQREADMQAGELAATVARLGRSLRHPVTGNQDARREGQRPAGTTLSRAIPRPR*
Ga0070763_107714792	3300005610	Soil	MNITYLIYEAERPRSMAEQREMDARAGEFAAAVARLGRSLRHHGRGRRSARQDSRRPVRATVSCAIPRPR*
Ga0068859_1028599581	3300005617	Switchgrass Rhizosphere	MNITYLIYQAERPRSAAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISCAVPRP
Ga0070717_106765482	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNIAYLVYQAERPKGTLERREADVRAGELAAAGARLGRSLRHAVTGQPNAGWGSQPPAIETISCAVPRPR*
Ga0070765_1005680752	3300006176	Soil	MNITYLMYEAERPRSTAEQREMDARAGEFATAVARLGRSLRHPAEGKRNARRDGRRPAGAAAGRAIPRPRQPVDR*
Ga0079222_126755092	3300006755	Agricultural Soil	GTAEQREADVRAGEMAAAFARIGRSLRHQVSGRHGTGWTAQPPAIETISCAVPRPR*
Ga0079220_106041791	3300006806	Agricultural Soil	MNIAYLIYEAERPKNTAEQREADVRAGEMAAAFARIGRSLRHQVSGRHGTGWTAQPPAIETISCAVPRPR*
Ga0079219_101419101	3300006954	Agricultural Soil	MNITYLIYQAERPRSAAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISCAVSRPR*
Ga0102924_10016575	3300007982	Iron-Sulfur Acid Spring	MNISYLIYEAERPRTIAEQREADVRVGEFAAAVARLGHSLRRTATRKQEPRRGGQRPATAALSCAVPRPR*
Ga0102924_10608974	3300007982	Iron-Sulfur Acid Spring	MNISYLVYSAERPRSIAEQREADMRTGEFAAAVARLGHSLRHPVTGKRDARRPALTTVSCAIPRPRQAAER*
Ga0105237_114321801	3300009545	Corn Rhizosphere	MNITYLIYQVERPRSAAEQREADARAGEMAAALARIGHSLRRPVTRKQAARWAARPPAIETIPCPVPRPR*
Ga0126372_127099031	3300010360	Tropical Forest Soil	MNITYLIYQAERPRSTTEQREADARAGEMAAAFARIGHSLRHAVMGRQDARLGAQPPAIETISCAVP
Ga0134125_101270423	3300010371	Terrestrial Soil	MNITYLIYQAERPRSTAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISCAVPRPR*
Ga0134128_129631891	3300010373	Terrestrial Soil	EVGTMNIAYLVYQAERPKGTLERREADVRAGELAAAVARLGRSLRHAVTGGPDAGRGSQPPAIETISCAVPRPR*
Ga0134126_103575202	3300010396	Terrestrial Soil	MNIAYLVYQAERPKGTLERREADVRAGELAAAVARLGRSLRHAVTGGPNAGWESQPPAIETISCAVPRPR*
Ga0126344_12016721	3300010866	Boreal Forest Soil	MNITYLIYEAERPRSTAGQREADARAGEFAAGVARLGRSLRHPGTGKRNARRDGHRPAGRAAARAIPRPR*
Ga0126359_12118223	3300010869	Boreal Forest Soil	MNISYQIYQAQRPRSMAEQREDDVRAGEIAAAFARLGRVLRHQVTGGRDARWTGQPPAIETISCAAARPRPTFHRQL*
Ga0126361_100999941	3300010876	Boreal Forest Soil	MNITYLIYEAERPRSMAEQREADARAGEFAASVARLGRSLRHQGRGRRIARRDSQRPVGATVSCAIPRPR*
Ga0126361_109662281	3300010876	Boreal Forest Soil	MNITYLIYEAERPRSTAGQREADARAGEFAAGVARLGRSLRHPGTGKRNARRDGHRPAGRAAARAIPRPRQPLDR*
Ga0126350_102529771	3300010880	Boreal Forest Soil	MNISYLIYTAERPRSPAEQREVDVRTGELAAAVARLGHSLRHPATGKRGARRPAMTTVSCAIPRPRQAAER*
Ga0137398_106389162	3300012683	Vadose Zone Soil	MNITYLIYEAERPRSMAEQREADARAGEFAAAVARLGRSLRHQGRGRRIARRDSQRPVGATVSCAIPRPR*
Ga0137413_105088092	3300012924	Vadose Zone Soil	MNITYLIYEAERPRSMAEQREADVRAGEFAAAVARLGRSLRHQGRGRRIAGRDSQRPVGATVSCAIPRPR*
Ga0137413_117714231	3300012924	Vadose Zone Soil	QAERTRSTTEQREADVRAGEMAAAIARLGRSLRHQVTGGRGARWEAQPPAIETISCAVSRPR*
Ga0157371_106570012	3300013102	Corn Rhizosphere	MNITYLIYQAERPRSTAEQREADARAGEMAAALARIGHSLRRPVTRKQAARWAARPPAIETIP
Ga0181531_100476122	3300014169	Bog	MNISYLMYQAERPRSAAEQREADVQAGELAATVARLGRSLRHPVTGNQDARREGQRPAGTTLSRAIPRPR*
Ga0157379_112880581	3300014968	Switchgrass Rhizosphere	MNITYLIYQAERPRSAAEQREADARAGEMAAALARIGHSLRRPVTRKQAARWAARPPAIETIPCPVPRPR*
Ga0137403_106641012	3300015264	Vadose Zone Soil	MNITYLIYQAERTRSTTEQREADVRAGEMAAAIARLGRSLRHQVTGGRSARWTGQPPAIESISCAVTRPR*
Ga0193729_11277781	3300019887	Soil	MNISYLIYEAERPRSTREQREADVRAGEMAAAFARLRRSLRHQVTGGRDTRWTGQPPAIESISCAVTHPR
Ga0206356_114550551	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MNITYLIYQAERPRSTAEQREADARAGEMAAALARIGHSLRRPVTRKQAARWAARPPAIETIPCPVPRPR
Ga0206354_105362711	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LIYQAERPRSTAEQREADARAGEMAAALARIGHSLRRPVTRKQAARWAARPPAIETIPCPVPRPR
Ga0210403_112947851	3300020580	Soil	MNISYLIYTAERPRSATEQREADVRAGELAAAVVRLGHSLRHPVTGKRGARRPSTTTVSCAIPRPRQAAER
Ga0210395_105191472	3300020582	Soil	MNITYLIYEAERPKSMAEQREADVRAGQLAAAVARLGHSLRHRATGKRNARRAARRPVTATVSCAIPGPR
Ga0210401_101153722	3300020583	Soil	MNISYLIYEAERPRSVAEQREADVRAGEMAGAFARLGRSLRHSVTGKPNARWQGQPPAIETISCAVPRPR
Ga0210401_102237082	3300020583	Soil	MNITYLIYEAERPRSMAEQREADVRAGEFAAGVARLGRSLRHPGTGKRNAGRVGHRPAGATVARAVPRPRQPLDR
Ga0210401_103898382	3300020583	Soil	MNITYLIYEAERPKSMAEQRAADVRAGQFAAAVAGLGHSLRHRATGKRNARRDARRPVTATVSCAIPRPR
Ga0210401_110570111	3300020583	Soil	MNITYLIYEAERPKSMAEQREADVRAGQLAAAVARFGHSLRHRATGKRNARRDARRPVTATVSCAIPGPR
Ga0210400_100364403	3300021170	Soil	MNITYSMYEAERPHSMAEQREADVRAGEFAAGVARLGRSLRHPGTGKRNAGRGGHRPAGATVARAVPRPRQPLDR
Ga0210408_106334262	3300021178	Soil	MNISYTIYEAERPRTISQQREADMRAGEMAAAAKRFGRSLRHPFTGKRDTGRASQRPDGATLSCAIPRP
Ga0210396_100809812	3300021180	Soil	MNISYQIYQAERPQSMTEQREADVRAGEMAAAFARLGRSLRHQVTGGRDTRWTGQPPAIETISCAAPRPR
Ga0210396_100869502	3300021180	Soil	MNITYSMYEAERPHSMAEQREADARAGEFAAGVARLGRSLRHPGTGKRNAGRGGHRPAGATVARAVPRPRQPLDR
Ga0210396_112593432	3300021180	Soil	MSISYLIYQAERPQSVAEQREADVRAGEMAAAVTRLARSLRHSVTGNQDARREGQRPAGAPVSC
Ga0210396_114993172	3300021180	Soil	MNISYLMYQAERPRSAAEQREADVQAGELAATVARLGRSLRHPVTGNQDARREGQRPAGTTLSRAIPRPR
Ga0210388_103414022	3300021181	Soil	MNSNYLIYEAERPRSMTEQRETDARTGEFAAAVGRLGRSLRHPATGKRNARQDARHPVGATVTCAIPRPR
Ga0210388_104816261	3300021181	Soil	MNITYLIYEAERPKSMAEQREADVRAGQFAAAVARLGHSLRHPATGKRNARRDARRPVTATVSCAIPRPR
Ga0210388_110187391	3300021181	Soil	MNITYLIYEAERPRSMAEQREADVRAGEFAAAVTRIGRSLRHPAMGRHSARRDGKRPIGATVACAIPRPR
Ga0210393_104454731	3300021401	Soil	MNISYLVYSAERPRSIAEQREADMRTGEFAAAVARLGHSLRHPVTGKRDARRPAMTTVSCTIPRPRQAAER
Ga0210393_113916851	3300021401	Soil	ITYLIYEAERPRSMAEQREMDARAGEFAAAVARLGRSLRHQGTGKRNARRDSRRPVGATVACAIPRPR
Ga0210385_100249012	3300021402	Soil	MINSYLIYQAERPRSVAEQREADVRAGELAAAVARLGRSLRHSVTGKQDARRDGERPARVAVSCAIPRPR
Ga0210385_100890663	3300021402	Soil	MNITYLIYEAERPRGMAEQRRADVQAGEFAAAVSRIGRSLRHPASAKNHASRAPKRTAGTTVARAIPRPRQPVDR
Ga0210385_100890664	3300021402	Soil	MNITYLIYEAERPRSMAEQREADVRAGEFAAAVTRIGRSLRHPAMGRHSARRHGKRPIGATVACAIPRPR
Ga0210385_107846221	3300021402	Soil	MNISYLVYSAERPRSIAEQREADMRTGEFAATVAHFGHSLRHPAMGKRVARRGGQRRASTTVACAGPQPR
Ga0210385_108167892	3300021402	Soil	MNISYLVYSAERPRSIAEQREADMRTGEFAAAVARLGHSLRHPVTGKRDARRPAMTTVSCAIPRPRQAAER
Ga0210385_108488052	3300021402	Soil	MNITYLIYEAERPRSMAEQRERDARAGEFAAAVARLGRSLRHPGTGKRNARRDSRRPVGATVACAIPRPR
Ga0210397_100629832	3300021403	Soil	MNITYLIYEAERPRSMAEQRETDARAGEFAAAVARLGRSLRHPGEGKRNARRDSRRPVVATVSCAIPRPR
Ga0210397_103219721	3300021403	Soil	MNISYQIYQAERPQSMTEQREADVRAGEMAAAFARLGRSLRHQVTGGRDTRWTGQPPAIETISCA
Ga0210389_102506491	3300021404	Soil	MNISYLIYEAERPRSVAEQREADVRAGEMAAAFARLSRSLRHQVAGKQNTRWGGQPPAIETISCAVPRPR
Ga0210389_102762842	3300021404	Soil	MSISYLIYQAERPQSVAEQREADVRAGEMAAAVTRLARSLRHSVTGNQDARREGQRPAGAPVSCAISRPQ
Ga0210389_102802152	3300021404	Soil	MNITYSMYEAERPHSMAEQREADVRAGEFAAGVARLGRSLRHPGTGKRNAGRVGHRPAGATVARAVPRPRQPLDR
Ga0210389_110157312	3300021404	Soil	VGTMSISYLIYQAERPQSMTEQREADVRAGEMAAAFARLGRSLRHQVTGGRDTRWTGQPPAIETISCAAPRPR
Ga0210389_112668161	3300021404	Soil	MNITYLIYEAERPRSTAEQREADVRAGEFAAAVTRIGRSLRHPATGKHSARRDSKRPIAATVTCAIPRPR
Ga0210387_107690451	3300021405	Soil	MNISYQIYQAERPQSMTEQREADVRAGEMAAAFARLGRSLRHQVTGGRDARWTGQPPAIETISCAAPRPR
Ga0210386_101342682	3300021406	Soil	MNISYLIYQAERPQSVAEQREADVRAGELAAAVARFGRSLRHPATGNQDARRAGQHQAGATVSCAIPRPR
Ga0210386_104659422	3300021406	Soil	MNITYLIYEAERPRSTAEQREADVRAGEFAAAVTRIGRSLRHPVTGKHSARRDSKRPIAATVTCAIPRPR
Ga0210386_110403961	3300021406	Soil	YLIYTAERPRSATEQREADVRAGELAAAVRRLGHSLRHPVTGKRGARRPSTTTVSCASPRPRQAAER
Ga0210386_114865061	3300021406	Soil	GNSVFLRCVREVGTMNITYLIYEAERPRSRAEQREADVRAGQIAASVARLGHSLRHPATGKRNARRGARRPVRAAVTCAVPRPR
Ga0210383_108059001	3300021407	Soil	MNISYQIYQAERPQSMTEQREADVRAGEMAAAFARLGRSLRHQVAGKQNTRWGGQPPAIETISCAVPRPR
Ga0210394_109965832	3300021420	Soil	MNITYLIYEAERPRSMAEQREMDARAGEFAAAVARLGRSLRHQGRGRRIARRDSRRPVGATVSCAIPRPR
Ga0210384_102166891	3300021432	Soil	IYEAERPRSMAEQRETDARAGEFAAAVARLGRSLRHPGEGKRDGRRLAGTTAARAIPRPRQPVDR
Ga0210390_100775312	3300021474	Soil	MNITYLIYEAERPRSMAEQRERDARAGEFAAAVARLGRSLRHPGTGKRNAGRGGHRPAGATVARAVPRPRQPLDR
Ga0210390_110969591	3300021474	Soil	MNFTYMIYEAERPRSMAEQREADVRAGQLAAAVARLGHSLRHRATGKRNARRAARRPVTATVSCAIPGPR
Ga0210392_101141951	3300021475	Soil	MNISYLIYEAERPRSVAEQREADVRAGEMAAVFARLGRSLRHSVTGKQDVRWGGQAPAIETISCAVPRPR
Ga0210398_107099201	3300021477	Soil	MNITYLIYEAERPRSMAEQREADVRAGEFAAAVTRIGRSLRHPAMGKHSARRDGKRPIGATVACAIPRPR
Ga0210410_107024792	3300021479	Soil	MNISYTIYEAERPRTISQQREADMRAGEMAAAAKRFGRSLRHPFTGKRDTGRASQRPDGATLSCAIPRPR
Ga0210409_105456291	3300021559	Soil	MNITYSMYEAGRPRSTAEQREADARAGEFAAGVARLGRSLRHPGTGKRNAGRVGHRPAGATVARAVPRPRQPPDR
Ga0224712_100414564	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	TMNITYLIYQAERPRSTAEQREADARAGEMAAALARIGHSLRRPVTRKQAARWAARPPAIETIPCPVPRPR
Ga0224712_101763692	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	NITYLIYQAERPRSMAEQREADTRAGEMAASFARIGRSLRHQVSGRHGAGWTAQPPAIETISCAVPRPR
Ga0242658_11263091	3300022530	Soil	YEAERPRSMAEQREADVRAGEMAAAFARLSRSLRHQVAGKQNTRWGGQPPAIETISCAVPRPR
Ga0242658_11327372	3300022530	Soil	NISYLIYEAERPRSVAEQREADVRAGEMAAVFARLGRSLRHSVTGKQDARWGGQAPAIETISCSCAVPRPR
Ga0212123_100156374	3300022557	Iron-Sulfur Acid Spring	MNISYLIYEAERPRTIAEQREADVRVGEFAAAVARLGHSLRRTATRKQEPRRGGQRPATAALSCAVPRPR
Ga0212123_102110541	3300022557	Iron-Sulfur Acid Spring	MNISYLVYSAERPRNVAEQREADMRIGEFAATVAHFGHSLRHPAMGKRVARRGGQRRASTTAASAGPRPR
Ga0242654_104249521	3300022726	Soil	EAERPRSVAEQREADVRAGEMAAVFARLGRSLRHSVTGKQDVRWGGQAPAIETISCAVPRPR
Ga0207707_104790812	3300025912	Corn Rhizosphere	MNITYLIYQAERPRSAAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISCAVPRPR
Ga0207671_114387871	3300025914	Corn Rhizosphere	MNITYLIYQAERPRSAAEQREADARAGEMAAALARIGHSLRRPVTRKQAARWAARPPAIETIPCPVPRPR
Ga0207649_113308341	3300025920	Corn Rhizosphere	VRTMNITYLIYQAERPRSAAEQREADARAGEMAAAFARIGHSLRHPVTGKQDTRWQAQPPAIETISCAVPRPR
Ga0207664_107528591	3300025929	Agricultural Soil	MNITYLIYQAERPRSAAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISCAVP
Ga0207664_109677722	3300025929	Agricultural Soil	MNIAYLVYQAERPKGTLEQREADVRAGELAAAVARLGRSLRHAVTGGPNAGWGSQPPAIETISCAVPRPR
Ga0207674_100741392	3300026116	Corn Rhizosphere	MNITYLIYQAERPRSTAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISCAVPRPR
Ga0179587_101432642	3300026557	Vadose Zone Soil	MNITYLIYEAERPRSMAEQREADVRAGEFAAAVARLGRSLRHQGRGRRIARRDSQRPVGATVSCAIPRPR
Ga0208985_10344551	3300027528	Forest Soil	MSITYLIYEAERPRSMTEQRETDARAGELAAAVARLGRSLRHPATGKNYAKRGQRAARTTVPCPVPRPRQPVER
Ga0208985_10344552	3300027528	Forest Soil	MNITYLIYEAERPRSMMEQREADARAGEFAAAVARLGHALRHPATGKRNARRDAQRPVRATVTCAIPRPR
Ga0208985_11067491	3300027528	Forest Soil	MNISYLVYQAERQLSAIEQREADVRAGELAAAVARFGHSLRHLVTGNKGARRESQCPATATFSCAIPRPR
Ga0209177_101122441	3300027775	Agricultural Soil	MNITYLIYQAERPRSAAEQREADARAGEMAAAFARIGHSLRHPVTGKQDARWQAQPPAIETISC
Ga0209112_100035075	3300027817	Forest Soil	MNMSYLIYQAERPRSVAEQREADVRAGELAAAITRFGRSLRHSVSGNQDARRAGQHPAGVTVSCAIPRPR
Ga0209112_100617262	3300027817	Forest Soil	MNISYLIYEAERPRSVAERREADVRAGELAAAVARFGRSLRHPVTGNQDARRAGQHPA
Ga0209112_100944533	3300027817	Forest Soil	MNITYLIYEAERPRSMMEQRETDARAGEFAAAVARLGRSLRHPATGKRNARQDARRPAGATVTCAIPRPR
Ga0209693_100985162	3300027855	Soil	MNISYLIYTAERPRSATEQREADVRAGELAAAVARLGHSLRHPVTGKRGARRPSTTTVSCAIPRPRQAAER
Ga0209624_100475653	3300027895	Forest Soil	MNITYLIYEAERPRSMAEQRQADVQAGEFAAAVSRIGRSLRHPASGKNHARRAPKRTAGTTVARAIPRPRQPVDR
Ga0209415_103024912	3300027905	Peatlands Soil	MNISYLIYQAERPRSRAEQREVDMRAGELAAVFWRLGRSLRRSVTGRQEARQEDQRPATAAVSCAIPRPR
Ga0209006_110763351	3300027908	Forest Soil	MNITYLIYEAERPRSMMEQRETDARAGEFAAAVTRLGRSLRHPATGKRNARRDAQRRVRATVACAIPRPR
Ga0308309_110459082	3300028906	Soil	MNITYLIYEAERPRSMAEQREADVRAGEVAAGDARLGRSLRRQGRGRRTARRDSQRPVGATVSCAIPRPR
Ga0311338_118657501	3300030007	Palsa	MNISYLLYQAEHQRSATEQREADVQAGEMAAAIARAGRSLRHAIMGAGDARPGDQRPAGATAACAVPRPR
Ga0311372_101465472	3300030520	Palsa	MSNISYLIYHAERPLSAAEQREADVRAGELAAAVTRLGRSLRRVVTGSRDAGRANACPAGAAPSRALPRPR
Ga0307482_10338273	3300030730	Hardwood Forest Soil	MNVTYLIYEAERPRSRAEQREADVRAGQIAASVARLGHSLRHPATGKRNARRGARRPVRAAVTCAVPRPR
Ga0307482_10590441	3300030730	Hardwood Forest Soil	MNITYLIYEAERPRSMTEQRETDARAGEFAAAVARLGRSLRHQGRGRRIARRDSRRPVGATVSCAIPRPR
Ga0307482_10590442	3300030730	Hardwood Forest Soil	MNITYSMYEAERPRSTAEQREADARAGEFAAGVARLGRSLRHPGTGRRNAGRGGHRPAGATVARAVPRPRRPLDR
Ga0310686_1002564093	3300031708	Soil	MNISYLMYQAERPRSAAEQREADVQAGELAATVARLGRSLRHPVTGNQDARREGQRPAGTALSRAIPRPR
Ga0310686_1065235821	3300031708	Soil	MNISYLIYQAERPRSMTEQREADVRAGEIAAAVARLGRSLRHPVTGKQDARREGQPPAIETISCAVPRPR
Ga0310686_1103573284	3300031708	Soil	MNISYLIYQAERPRSVAEQREADVRAGEMAAAVARLGRSLRHAVTGKQDARREGQRPAGATVSCAVPRPR
Ga0310686_1119033021	3300031708	Soil	FTYLIYEAERPRSMAEQREADVRAGQLAAAVARLGHSLRHPATGKRNARRDARRDGQRPVTATVSCAIPRPQ
Ga0307476_101480502	3300031715	Hardwood Forest Soil	MNIAYMIYEAERPRTMAEQREADVQAGEFAAAVARVGHSLRRTATRKQEPRRGGQRPATAALSCAVPRPR
Ga0307474_100517492	3300031718	Hardwood Forest Soil	MNITYLIYEAERPRSMAEQRERDARAGEFAAAVARLGRSLRHQGRGRRIARRDSRRPVGATVSCAIPRPR
Ga0316045_1228911	3300031815	Soil	QAERPRSMAEQREADVQAGEMAAAVAQIGRSLRHAVTGKRDAEWDGQPPAIETISCAVPRPR
Ga0307478_109400451	3300031823	Hardwood Forest Soil	MNISYLIYQAERERSAFEQHEADVRAGELAAAVARFGRSLRHAVTGNNSARRESQRLAAATFSCSCAIPRPQ
Ga0307478_113441721	3300031823	Hardwood Forest Soil	MMNITYLIYEAERPRSMMEQRETDARAGELAAAVARLGRSLRHPATGRRNARQGARRPVGATVTCAIPRPR
Ga0307479_101311312	3300031962	Hardwood Forest Soil	MNISYMIYEAERPRNIAQQREADMRAGEMAAAAKRFGRSLRHPFTGKRDTGRASQRPDGATLSCAIPRPR
Ga0348332_122369813	3300032515	Plant Litter	NISYLIYQAERPRSMAEQREADVQAGEMAAAVAQIGRSLRHAVTGKRDAEWDGQPPAIETISCAVPRPR
Ga0348332_136023831	3300032515	Plant Litter	MNISYLIYEAERPRSMTEQREADVRAGEIAAAVARLGRSLRHPVAGKQADRWAAQPPAIETISCAVPRPR
Ga0335075_100190242	3300032896	Soil	MNITYLIYEAERPRSMAEQRAADERAGQLASAVARLGHSLTHRAPGKRDGRRPARTTISRAIPRPRVPADR
Ga0316212_10050552	3300033547	Roots	MNISYLIYQAERTRSAAEQREADVRAGELAAAVARVGRSLRHPMTGNQDARREGQRPAGTTLSRAIPRPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064915

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences