Metagenome / Metatranscriptome Family F064760

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064760
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	40 residues
Representative Sequence	AESVAGASRHLIDGAGHMPHMERPAEVQAAIEETIARAG
Number of Associated Samples	109
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.34 %
% of genes near scaffold ends (potentially truncated)	94.53 %
% of genes from short scaffolds (< 2000 bps)	92.19 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.469 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.312 % of family members)
Environment Ontology (ENVO)	Unclassified (28.125 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.969 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.39% β-sheet: 0.00% Coil/Unstructured: 77.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01370	Epimerase	29.69
PF07993	NAD_binding_4	14.06
PF00106	adh_short	4.69
PF03176	MMPL	2.34
PF12146	Hydrolase_4	2.34
PF13463	HTH_27	1.56
PF13784	Fic_N	0.78
PF13419	HAD_2	0.78
PF00528	BPD_transp_1	0.78
PF01590	GAF	0.78
PF02887	PK_C	0.78
PF03706	LPG_synthase_TM	0.78
PF09350	DJC28_CD	0.78
PF13738	Pyr_redox_3	0.78
PF03704	BTAD	0.78
PF13649	Methyltransf_25	0.78
PF08241	Methyltransf_11	0.78
PF01266	DAO	0.78
PF07366	SnoaL	0.78
PF00211	Guanylate_cyc	0.78
PF09335	SNARE_assoc	0.78
PF13472	Lipase_GDSL_2	0.78
PF05977	MFS_3	0.78
PF00400	WD40	0.78
PF02601	Exonuc_VII_L	0.78
PF12802	MarR_2	0.78
PF14016	DUF4232	0.78
PF00196	GerE	0.78
PF13561	adh_short_C2	0.78
PF07729	FCD	0.78
PF00390	malic	0.78
PF00756	Esterase	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	2.34
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	2.34
COG0281	Malic enzyme	Energy production and conversion [C]	0.78
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.78
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.78
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.78
COG1570	Exonuclease VII, large subunit	Replication, recombination and repair [L]	0.78
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.78
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.78
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.78
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.78
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.78
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.47 %
Unclassified	root	N/A	19.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.91 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.22 %
Unclassified	root	N/A	19.53 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.62 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	5.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.47 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.91 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	3.91 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.12 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.47 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	3.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.12 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.12 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.78 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.47 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	3.91 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.12 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.12 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.78 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.47 %
Nakamurella flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella flava	3.91 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.12 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.12 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	0.78 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10056611	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300005435\|Ga0070714_102065522	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005439\|Ga0070711_101534393	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300005467\|Ga0070706_100155958	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300005563\|Ga0068855_100855357	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005591\|Ga0070761_10037942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2699	Open in IMG/M
3300005602\|Ga0070762_10216229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1178	Open in IMG/M
3300005713\|Ga0066905_100804806	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005718\|Ga0068866_11298948	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005764\|Ga0066903_104321047	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005842\|Ga0068858_100271644	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300005843\|Ga0068860_101825555	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300006028\|Ga0070717_10076248	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300006028\|Ga0070717_12129791	Not Available	504	Open in IMG/M
3300006358\|Ga0068871_100512053	Not Available	1083	Open in IMG/M
3300006358\|Ga0068871_100705525	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300006804\|Ga0079221_10318956	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300006806\|Ga0079220_11527851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	574	Open in IMG/M
3300006954\|Ga0079219_10478058	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300006954\|Ga0079219_11741921	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300007076\|Ga0075435_101786539	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300009089\|Ga0099828_10122750	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300009137\|Ga0066709_101047181	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300009143\|Ga0099792_10739736	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300009143\|Ga0099792_11125144	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300009522\|Ga0116218_1518799	Not Available	531	Open in IMG/M
3300009551\|Ga0105238_10491411	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300009672\|Ga0116215_1290386	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300009698\|Ga0116216_10332609	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300010046\|Ga0126384_10073484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2437	Open in IMG/M
3300010046\|Ga0126384_11264990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	683	Open in IMG/M
3300010048\|Ga0126373_10370620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella flava	1449	Open in IMG/M
3300010048\|Ga0126373_10385744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1422	Open in IMG/M
3300010048\|Ga0126373_13215416	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010341\|Ga0074045_10598121	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010360\|Ga0126372_11559660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300010371\|Ga0134125_12987928	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010376\|Ga0126381_101234705	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300010396\|Ga0134126_12927921	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010880\|Ga0126350_11001248	Not Available	929	Open in IMG/M
3300012198\|Ga0137364_10653736	Not Available	793	Open in IMG/M
3300012199\|Ga0137383_10199157	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300012206\|Ga0137380_10465815	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300012208\|Ga0137376_10291946	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300012209\|Ga0137379_11507243	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012489\|Ga0157349_1027316	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012582\|Ga0137358_10566260	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300012971\|Ga0126369_11387171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300012971\|Ga0126369_11905761	Not Available	683	Open in IMG/M
3300012971\|Ga0126369_12593002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300012971\|Ga0126369_12601663	All Organisms → cellular organisms → Bacteria → Terrabacteria group	591	Open in IMG/M
3300013297\|Ga0157378_10656533	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300014199\|Ga0181535_10756684	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300016294\|Ga0182041_10166513	Not Available	1720	Open in IMG/M
3300016319\|Ga0182033_10250602	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300016319\|Ga0182033_10953312	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300016341\|Ga0182035_10642979	Not Available	920	Open in IMG/M
3300016357\|Ga0182032_10242728	Not Available	1396	Open in IMG/M
3300016371\|Ga0182034_11804383	Not Available	539	Open in IMG/M
3300016445\|Ga0182038_10156399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1747	Open in IMG/M
3300016445\|Ga0182038_10589951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	958	Open in IMG/M
3300017926\|Ga0187807_1302253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300017932\|Ga0187814_10069321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1293	Open in IMG/M
3300017942\|Ga0187808_10172002	Not Available	959	Open in IMG/M
3300017959\|Ga0187779_11026131	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300017961\|Ga0187778_11292036	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300018043\|Ga0187887_10589800	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300020062\|Ga0193724_1101770	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300021358\|Ga0213873_10310471	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300021433\|Ga0210391_10681516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300021439\|Ga0213879_10177091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella flava	628	Open in IMG/M
3300021444\|Ga0213878_10156270	Not Available	948	Open in IMG/M
3300021559\|Ga0210409_10269937	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300021560\|Ga0126371_11620584	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300025898\|Ga0207692_10225294	Not Available	1113	Open in IMG/M
3300025916\|Ga0207663_10210586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300025922\|Ga0207646_10077253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2976	Open in IMG/M
3300025928\|Ga0207700_11034412	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300025929\|Ga0207664_10954071	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300025960\|Ga0207651_10841545	Not Available	815	Open in IMG/M
3300025972\|Ga0207668_10425457	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300026551\|Ga0209648_10509871	Not Available	692	Open in IMG/M
3300027064\|Ga0208724_1022678	Not Available	631	Open in IMG/M
3300027696\|Ga0208696_1157391	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300027765\|Ga0209073_10297768	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300028780\|Ga0302225_10364795	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300030399\|Ga0311353_10652490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	914	Open in IMG/M
3300030494\|Ga0310037_10045743	Not Available	2088	Open in IMG/M
3300030494\|Ga0310037_10113050	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300030707\|Ga0310038_10372972	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031616\|Ga0307508_10693953	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031716\|Ga0310813_10665946	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031724\|Ga0318500_10062961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1610	Open in IMG/M
3300031724\|Ga0318500_10069700	Not Available	1542	Open in IMG/M
3300031771\|Ga0318546_10352623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300031793\|Ga0318548_10294213	Not Available	798	Open in IMG/M
3300031793\|Ga0318548_10515374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella flava	584	Open in IMG/M
3300031796\|Ga0318576_10323631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	728	Open in IMG/M
3300031799\|Ga0318565_10208199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	951	Open in IMG/M
3300031805\|Ga0318497_10549443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	647	Open in IMG/M
3300031832\|Ga0318499_10269864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300031833\|Ga0310917_10978448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella flava	568	Open in IMG/M
3300031846\|Ga0318512_10296546	Not Available	803	Open in IMG/M
3300031846\|Ga0318512_10561725	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031896\|Ga0318551_10165382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300031946\|Ga0310910_11221233	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031954\|Ga0306926_11434191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	800	Open in IMG/M
3300031954\|Ga0306926_12110193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300031959\|Ga0318530_10508999	Not Available	501	Open in IMG/M
3300031962\|Ga0307479_11775262	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300032009\|Ga0318563_10385335	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300032041\|Ga0318549_10052582	Not Available	1685	Open in IMG/M
3300032043\|Ga0318556_10654058	Not Available	547	Open in IMG/M
3300032044\|Ga0318558_10337754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella flava	747	Open in IMG/M
3300032065\|Ga0318513_10169230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1047	Open in IMG/M
3300032089\|Ga0318525_10006588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5025	Open in IMG/M
3300032089\|Ga0318525_10135873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	1260	Open in IMG/M
3300032160\|Ga0311301_10125356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4809	Open in IMG/M
3300032180\|Ga0307471_101395882	Not Available	861	Open in IMG/M
3300032261\|Ga0306920_102307001	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300032261\|Ga0306920_103697085	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032805\|Ga0335078_12540583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300032828\|Ga0335080_11885384	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300032896\|Ga0335075_10060659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5198	Open in IMG/M
3300033158\|Ga0335077_11537737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300033289\|Ga0310914_11222556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	653	Open in IMG/M
3300033290\|Ga0318519_10738123	Not Available	603	Open in IMG/M
3300033475\|Ga0310811_10707476	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.84%
Host-Associated	Host-Associated	10.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.94%
Plants	Host-Associated → Plants	10.16%
Aquatic	Environmental → Aquatic	3.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.69%
Freshwater	Environmental → Aquatic → Freshwater	3.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.12%
Roots	Host-Associated → Plants → Roots	2.34%
Peat	Environmental → Terrestrial → Peat	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.41%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.03%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100566112	3300003505	Forest Soil	AESVAGAVRYLVDGAGHMPHMERPAQVQAAIEETIARAGGAEELP*
Ga0070714_1020655221	3300005435	Agricultural Soil	AQAEAVTGADRHLIDRAGHMPHMERPAEVQAAIEQTIARAT*
Ga0070711_1015343932	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RGDRIIPAAQAEAVTGAVSHLIDDAGHMPQMERPAEVQAAIEETIARAG*
Ga0070706_1001559583	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ILPAAQAGSVAGAVRYLLDGAGHMPHMERPAEVQAAIEETIARA*
Ga0068855_1008553572	3300005563	Corn Rhizosphere	QAESVTGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAS*
Ga0070761_100379421	3300005591	Soil	GAVRHVIDGAGHMPHMERPSEVQAAIEEAITGAADFA*
Ga0070762_102162293	3300005602	Soil	GAAVHLLDGAGHMAHLERPAEVQAAIEEAIATAPPG*
Ga0066905_1008048062	3300005713	Tropical Forest Soil	VIPAAQAESVAGAVRHLLEGAGHMPHMERPAEVQAAIEETIARTT*
Ga0068866_112989482	3300005718	Miscanthus Rhizosphere	SVTGAVRHLIDGAGHMPQMERPAEVQAAIEETIAGAG*
Ga0066903_1043210472	3300005764	Tropical Forest Soil	VAGADRHLLDDAGHMPHMERPAEVQAAIEEAIAKAG
Ga0068858_1002716443	3300005842	Switchgrass Rhizosphere	SVTGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG*
Ga0068860_1018255551	3300005843	Switchgrass Rhizosphere	PAAQAEAVTGAVSHLIDDAGHMPQMERPAEVQAAIEETIARAG*
Ga0070717_100762484	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RSVAGAARHLIDGAGHMPHLERPAEVRAAIEETIARAP*
Ga0070717_121297912	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IPPAQAESVAGAARHLIDGAGHMPHMERPAEVQAAVEESIARAG*
Ga0068871_1005120531	3300006358	Miscanthus Rhizosphere	AGAARHLIDGAGHMPHMERPAEVQAAVEESIARAG*
Ga0068871_1007055251	3300006358	Miscanthus Rhizosphere	SVTGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAS*
Ga0079221_103189561	3300006804	Agricultural Soil	VTGADRHLIDRAGHMPHMERPAEVQAAIEQTIARAT*
Ga0079220_115278511	3300006806	Agricultural Soil	GADRHLIDRAGHMPHMERPAEVQAAIEQTIARAT*
Ga0079219_104780582	3300006954	Agricultural Soil	VMGADRHLIEGAGHMPHMERPAEVQAAIEQTIARAT*
Ga0079219_117419212	3300006954	Agricultural Soil	AVTGADRHLIDRAGHMPHMERPAEVQAAIEQTIARAT*
Ga0075435_1017865391	3300007076	Populus Rhizosphere	AQAEAVTGAVSHLIDDAGHMPQMERPAEVQAAIEETIARAG*
Ga0099828_101227503	3300009089	Vadose Zone Soil	VPGAVSHLLDGAGHMPHMERPAEVQAAIEETIARAG*
Ga0066709_1010471811	3300009137	Grasslands Soil	DRIIPAAQAEAVTGAVSHLIDNAGHMPQMERPAEVQAAIEETIARAP*
Ga0099792_107397361	3300009143	Vadose Zone Soil	TGAVSRLIDDAGHMPQMERPAEVQAAIAETIARAG*
Ga0099792_111251442	3300009143	Vadose Zone Soil	PPAQAESVAGAVCYLLDGAGHMPHMERPAEVQAAIEEAMARAG*
Ga0116218_15187991	3300009522	Peatlands Soil	LHIEDAEVVTGAVRHLVDGAGHMPHTERPADVRAAIEETIASAG*
Ga0105238_104914112	3300009551	Corn Rhizosphere	GAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG*
Ga0116215_12903862	3300009672	Peatlands Soil	VQAESAAGAVRHLIDGTGQMPHMERPAEVQAAIEETIARST*
Ga0116216_103326092	3300009698	Peatlands Soil	AAQAESVTGAVRHLIDGAGHMPHMERPAEVQAAIEETIARST*
Ga0126384_100734845	3300010046	Tropical Forest Soil	EEAIFPAAQAEAVPGTVRVLVDGAGHMPHMERPAAVQAAIEAAVARAS*
Ga0126384_112649901	3300010046	Tropical Forest Soil	IIPPAQAESVAGAVRHLVDGAGHMPHMERPAEVQAAIEETIARSG*
Ga0126373_103706201	3300010048	Tropical Forest Soil	IIPAGQAAAVTAADPSAVVRVIDGAGHMPHLERPAESLTAIADTIARAG*
Ga0126373_103857443	3300010048	Tropical Forest Soil	VCGCWPDGVIPAAQAESVAGAVRHLLEGAGHMPHMERPAEVQAAIEETIARTT*
Ga0126373_132154162	3300010048	Tropical Forest Soil	PAAQAESVSGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG*
Ga0074045_105981212	3300010341	Bog Forest Soil	AESVAGAARHLIDGAGHMPHMERPAEVQAAIEETIARST*
Ga0126372_115596601	3300010360	Tropical Forest Soil	VAGADRHLLDDAGHMPHMERPAEVQAAIEEAIAKAG*
Ga0134125_129879281	3300010371	Terrestrial Soil	AQAESVTGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG*
Ga0126381_1012347052	3300010376	Tropical Forest Soil	ESVAGAVRHVIDGAGHMPQMERPAEVQAAIEESIARAS*
Ga0134126_129279212	3300010396	Terrestrial Soil	PAAQAESVTGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG*
Ga0126350_110012482	3300010880	Boreal Forest Soil	VDGAVSRLIEGAGHMAHMERPAEGQAAIEETIARAS*
Ga0137364_106537362	3300012198	Vadose Zone Soil	AGAARHLLDGAGHMPHMERPAEVQAAIEETIARAG*
Ga0137383_101991571	3300012199	Vadose Zone Soil	RIIPAAQAGSVTGAVSHLIDGAGHMPQMERPTEVQAAIEETIARAG*
Ga0137380_104658152	3300012206	Vadose Zone Soil	IPAAQAESVAGAVRHLIDGAGHMPHMERPAEVQAAIEETIARTG*
Ga0137376_102919463	3300012208	Vadose Zone Soil	RIIPAAQAESVAGAVRRLIDGAGHMPQMERPDELQAAIEETIARAG*
Ga0137379_115072431	3300012209	Vadose Zone Soil	DAVTGAVRHLIDGAGHMPQMERPAEVQAAIEETLARAG*
Ga0157349_10273161	3300012489	Unplanted Soil	VSGVVRHVIDGAGHMPQMERPADVQAAIEETIARTG*
Ga0137358_105662601	3300012582	Vadose Zone Soil	IPAAQAEAVTGAVSRLIDDAGHMPQMERPAEVQAAIEETIARAG*
Ga0126369_113871711	3300012971	Tropical Forest Soil	QIIPATQAGSVAGAVRQVLDGAGHMPHMERPAEVQAAIEETIARTP*
Ga0126369_119057611	3300012971	Tropical Forest Soil	GAVRQMLDGAGHMPHMERPAEVKAAIEETIARTP*
Ga0126369_125930022	3300012971	Tropical Forest Soil	GQAESVEGASRHLVDGAGHMPHMERPAEVQAAIEEAITRAG*
Ga0126369_126016632	3300012971	Tropical Forest Soil	VEGASRHLVDGAGHMPHMERPAEVQAAIEETITRAG*
Ga0157378_106565332	3300013297	Miscanthus Rhizosphere	IPAAQAESVTGAVRHVIDGAGHMPQMERPAEVQAAIEETIAGAG*
Ga0181535_107566841	3300014199	Bog	AESVTGAVRHLIDDAGHMPHMERPAEVQAAIEATIARST*
Ga0182041_101665131	3300016294	Soil	QAEGMTGAVRYLVDGAGHMPHMEKPAEVQAAIEETIARVR
Ga0182033_102506023	3300016319	Soil	PATQAGSVAGAVRQLLDGAGHLPHMERPAEVQAAIEETIARTP
Ga0182033_109533122	3300016319	Soil	VPGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG
Ga0182035_106429792	3300016341	Soil	AEQARSVAGASSRLIDGAGHMAHMERPAEVQAAIEETIAGR
Ga0182032_102427281	3300016357	Soil	VAGAVRQLLDGAGHLPHMERPAEVQAAIEETIARTP
Ga0182034_118043831	3300016371	Soil	QAESVAGASHHLIDGAGHMPHMERPAEVQAAIEETIARAG
Ga0182038_101563991	3300016445	Soil	PAAQAESVTGAVRYLVDGAGHMPHMERPAQVQAAIEETIARAG
Ga0182038_105899512	3300016445	Soil	QSATGAARYLVDGAGHMPHMERPGEVQAAIEETIARAGA
Ga0187807_13022531	3300017926	Freshwater Sediment	ESVTGAVRYLIDGAGHMPHMERPGEVQAAIEEAIARAG
Ga0187814_100693211	3300017932	Freshwater Sediment	ESITGAVRYLVDGAGHMPHMEKPAEVQAAIEETIARAR
Ga0187808_101720021	3300017942	Freshwater Sediment	ESVTGAVRYLVDGAGHMPHMERPGEVQAAIEETIARAG
Ga0187779_110261312	3300017959	Tropical Peatland	AGAVRHLIGRAGHMPHMERPAEVQAAIEETIARAT
Ga0187778_112920362	3300017961	Tropical Peatland	AQADSVAGAERRTIDDAGHMPHMERPAEVQAAIEETIARAG
Ga0187887_105898002	3300018043	Peatland	QADAVTGADHRLIDGAGHMPHMERPAEVQAAIEQTIARAT
Ga0193724_11017702	3300020062	Soil	IIPAAQAESVTGAVRHLIDGAGHMPQMERPAEVQAAIEETIARAG
Ga0213873_103104711	3300021358	Rhizosphere	AESVAGAERRLIDGAGHMPHMERPAEVQAAIEETIARST
Ga0210391_106815161	3300021433	Soil	GAAVHLLDGAGHMAHLERPAEVQAAIEEAIAAAPPG
Ga0213879_101770911	3300021439	Bulk Soil	AAPGADIRVIDGAGHMPHMERPAEAQAAVEGAIARAG
Ga0213878_101562703	3300021444	Bulk Soil	VPAAQAQSVPGAVRVLVDGAGHMPHMERPAAVQAAIEQAIAAAARS
Ga0210409_102699373	3300021559	Soil	AVTGAVSHLIDDAGHMPQMERPAEVQAAIEETIARAG
Ga0126371_116205841	3300021560	Tropical Forest Soil	VPGAVRHVIDGAGHMPHMERPADVQAAIEETIARAG
Ga0207692_102252942	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AQAESVADAARHLIDGAGHMPHMERPAEVQAAVEESIARAG
Ga0207663_102105861	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ESVAGAARHLIDGAGHMPHMERPAEVQAAVEESIARAG
Ga0207646_100772531	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VADAIRVLVAGAGHMPHMERPAAVQAAIEAAIARAC
Ga0207700_110344121	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTGADRHLIDRAGHMPHMERPAEVQAAIEQTIARAT
Ga0207664_109540712	3300025929	Agricultural Soil	EAVTGADRHLIDRAGHMPHMERPAEVQAAIEQTIARAT
Ga0207651_108415452	3300025960	Switchgrass Rhizosphere	AESVAGAARHLIDGAGHMPHMERPAEVQAAVEESIARAG
Ga0207668_104254572	3300025972	Switchgrass Rhizosphere	SVTGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG
Ga0209648_105098712	3300026551	Grasslands Soil	VAGAVCYLLDGAGHMPHMERPAEVQAAIEEAIARAG
Ga0208724_10226781	3300027064	Forest Soil	IIPAAQAESVAGAVRYLIDGAGHMPQMERPAEVQAAIEETIARST
Ga0208696_11573912	3300027696	Peatlands Soil	PAAQAESVAGAVRHLIDGAGHLPHMERPAEVQAAIEETIARST
Ga0209073_102977682	3300027765	Agricultural Soil	QAESVTGAVRHLVDGAGHMPQMERPAEVQAAIEETIARAG
Ga0302225_103647951	3300028780	Palsa	AQAVAGAVRYVIEGAGHMPHMERPVEVQTAIEDTIARAG
Ga0311353_106524901	3300030399	Palsa	QAQAVAGAVRYVIEGAGHMPHMERPVEVQTAIEDTIARAG
Ga0310037_100457432	3300030494	Peatlands Soil	LHIEDAEVVTGAVRHLVDGAGHMPHTERPADVRAAIEETIASAG
Ga0310037_101130501	3300030494	Peatlands Soil	SVTGAVSHLVDGAGHMPHMERPAEVQAAIEETIARST
Ga0310038_103729722	3300030707	Peatlands Soil	QAESVSGAVRHLVDGAGHMPHMERPAEVQAAIEETIARST
Ga0307508_106939531	3300031616	Ectomycorrhiza	QAEAVTGADRRLIDGAGHMPHMERPAEVQAAIEETIARVP
Ga0310813_106659461	3300031716	Soil	SVTGAVRHLIDGAGHMPQMERPAGVQAAIEETIARAG
Ga0318500_100629612	3300031724	Soil	IPPAQAESVAGAVRHLVDDAGHMPHMERPAEVQAAIEEAITRAG
Ga0318500_100697003	3300031724	Soil	SVAGAVRQLLDGAGHLPHMERPAEVQAAIEETIARTP
Ga0318546_103526231	3300031771	Soil	AGAVRHLLDDAGHMPHMERPAEVQAAIEEAITRAG
Ga0318548_102942131	3300031793	Soil	AESVAGAVHRLLDDTGHMPHMERPAEVQAAIEETIARAR
Ga0318548_105153741	3300031793	Soil	VAPGAAVRVIDGAGHMPHMERPAEAQAAVEETIARAG
Ga0318576_103236312	3300031796	Soil	AESVTGAVRYLVDGAGHMPHMERPAQVQAAIEETIARAG
Ga0318565_102081992	3300031799	Soil	AEAVAGAGRHLIDGAGHMPHMERPAEVQAAIEETIAGSG
Ga0318497_105494431	3300031805	Soil	VSGAVRYLVDGAGHMPHMERPAQVQAAVEETIARAG
Ga0318499_102698642	3300031832	Soil	SGAVRYLVDGAGHMPHMERPAQVQAAVEETIARAG
Ga0310917_109784482	3300031833	Soil	VAAVAPGAAVRVIDGAGHMPHMERPAEAQAAVEETIARAG
Ga0318512_102965461	3300031846	Soil	AVSGAASHLIDGAGHMAHMERPAEVQAAIEQTIAGR
Ga0318512_105617252	3300031846	Soil	LHLRHVPGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG
Ga0318551_101653822	3300031896	Soil	AVAGAVSYLLDGAGHMPHMERPAEVQTAIEETIARARLLPPKQVP
Ga0310910_112212331	3300031946	Soil	PAAQAESVPGAVRHVNDGAGHMPQMERPAEVQAAIEETIARAG
Ga0306926_114341911	3300031954	Soil	AGAVRHLIDGAGHMPHMERPAEVQAAIEETIARSS
Ga0306926_121101931	3300031954	Soil	IPATQAGSLAGAVRHMLDGAGHMPHMERPAEVQAAIEETIARTP
Ga0318530_105089991	3300031959	Soil	AAQAESVTGAVRYLVDGAGHMPHMERPGEVQAAIEETIARAE
Ga0307479_117752621	3300031962	Hardwood Forest Soil	ADRIIPAAQAESVTGAVRHLIDGAGHLPHMERPAEVQAAIEETIARST
Ga0318563_103853352	3300032009	Soil	RHVPGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG
Ga0318549_100525821	3300032041	Soil	PAGQAGSVAVAASYVIDGAGHMAHMERPAEVQAAIEETIAGR
Ga0318556_106540583	3300032043	Soil	IPAAQAGSVAGAVSYLLDGAGHMPHMERPAEVQAAIEETIARAS
Ga0318558_103377542	3300032044	Soil	HVPRAVAPGAAVRVIDGAGHMPHMERPAEAQAAVEETIARAG
Ga0318513_101692302	3300032065	Soil	ESVAGAVRHLLDDAGHMPHMERPAEVQAAIEEAITRAG
Ga0318525_100065881	3300032089	Soil	AAVAPGAAVRVIDGAGHMPHMERPAEAQAAVEETIARAG
Ga0318525_101358731	3300032089	Soil	AQAGSVAGAVRYLVEGAGHMPHMERPGEVQAAIEETIARAG
Ga0311301_101253563	3300032160	Peatlands Soil	VQAESAAGAVRHLIDGTGQMPHMERPAEVQAAIEETIARST
Ga0307471_1013958822	3300032180	Hardwood Forest Soil	AESVAGASRHLIDGAGHMPHMERPAEVQAAIEETIARAG
Ga0306920_1023070011	3300032261	Soil	SAPGAVRHMIDGAGHMPQMERPAEVQAAIEETIARAG
Ga0306920_1036970852	3300032261	Soil	AQAESVAGAVRHVIDGAGHMPQMERPAEVQAAIEETIARAG
Ga0335078_125405831	3300032805	Soil	AQAQSVAGAARHLVDGAGHMPHMERPGEVQAAIEETIVRAG
Ga0335080_118853841	3300032828	Soil	SGAVRHVIDGAGHMPQMERPADVQAAIEETIARAG
Ga0335075_100606597	3300032896	Soil	SVPGAVRHLVDGAGHMPHMERPGEVQAAIEQAIARAS
Ga0335077_115377371	3300033158	Soil	VAGASRHLLDGAGHMPHMERPAEVQAAIEETIARAG
Ga0310914_112225561	3300033289	Soil	ESVSGAVRYLVDGAGHMPHMERPAQVQAAVEETIARAG
Ga0318519_107381232	3300033290	Soil	VAGAVRYLVDGAGHMPHMEKPAEVQAAIEETIARVR
Ga0310811_107074761	3300033475	Soil	SVTGAARHLIDGAGHMPQMERPAEVQAAIEETIARAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064760

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences