Metagenome / Metatranscriptome Family F064610

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064610
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	41 residues
Representative Sequence	GVTLLFGGLFLLSLGWFGARYPMLSPRLAADTLERERH
Number of Associated Samples	110
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.60 %
% of genes near scaffold ends (potentially truncated)	96.09 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.656 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.125 % of family members)
Environment Ontology (ENVO)	Unclassified (47.656 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.125 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.97% β-sheet: 0.00% Coil/Unstructured: 53.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00127	Copper-bind	39.84
PF13478	XdhC_C	7.03
PF13490	zf-HC2	7.03
PF02625	XdhC_CoxI	4.69
PF13473	Cupredoxin_1	4.69
PF08281	Sigma70_r4_2	2.34
PF07883	Cupin_2	0.78
PF02627	CMD	0.78
PF13561	adh_short_C2	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1975	Molybdoenzyme maturation factor PaoD (Mo cofactor insertion), XdhC/CoxF family	Posttranslational modification, protein turnover, chaperones [O]	4.69
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.78
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.66 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.66 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.66 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	76.56 %
Unclassified	root	N/A	2.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.56 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	74.22 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.34 %
Unclassified	root	N/A	2.34 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	50.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.34 %
Unclassified	root	N/A	2.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	47.66 %
Gemmatimonadetes bacterium 13_2_20CM_2_69_23	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	3.12 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.34 %
Unclassified	root	N/A	2.34 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	47.66 %
Gemmatimonadetes bacterium 13_2_20CM_2_69_23	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	3.12 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.34 %
Unclassified	root	N/A	2.34 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	47.66 %
Gemmatimonadetes bacterium 13_2_20CM_2_69_23	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	3.12 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.34 %
Unclassified	root	N/A	2.34 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10118442	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	759	Open in IMG/M
3300002916\|JGI25389J43894_1036896	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	843	Open in IMG/M
3300005166\|Ga0066674_10168536	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1038	Open in IMG/M
3300005175\|Ga0066673_10646358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300005179\|Ga0066684_10836927	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005180\|Ga0066685_10154100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1564	Open in IMG/M
3300005181\|Ga0066678_10298685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1053	Open in IMG/M
3300005406\|Ga0070703_10014900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2219	Open in IMG/M
3300005458\|Ga0070681_10820887	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005518\|Ga0070699_101954918	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	536	Open in IMG/M
3300005536\|Ga0070697_100096833	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2448	Open in IMG/M
3300005536\|Ga0070697_100387369	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005540\|Ga0066697_10617523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	600	Open in IMG/M
3300005546\|Ga0070696_100685678	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	834	Open in IMG/M
3300005552\|Ga0066701_10046759	All Organisms → cellular organisms → Bacteria	2355	Open in IMG/M
3300005554\|Ga0066661_10874398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300005555\|Ga0066692_10163153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1375	Open in IMG/M
3300005555\|Ga0066692_10485718	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005555\|Ga0066692_10835103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300005557\|Ga0066704_10201640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1345	Open in IMG/M
3300005559\|Ga0066700_10106190	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1848	Open in IMG/M
3300005569\|Ga0066705_10446208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	811	Open in IMG/M
3300005574\|Ga0066694_10017895	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3097	Open in IMG/M
3300005574\|Ga0066694_10054639	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300005586\|Ga0066691_10057832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2095	Open in IMG/M
3300005587\|Ga0066654_10433401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	718	Open in IMG/M
3300006031\|Ga0066651_10224955	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	995	Open in IMG/M
3300006032\|Ga0066696_10427415	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	866	Open in IMG/M
3300006034\|Ga0066656_11135764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300006046\|Ga0066652_100211622	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300006755\|Ga0079222_11085663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	701	Open in IMG/M
3300006796\|Ga0066665_10676335	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300006797\|Ga0066659_10320480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1191	Open in IMG/M
3300006797\|Ga0066659_10360652	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300006852\|Ga0075433_10920377	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300006871\|Ga0075434_100242175	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300006880\|Ga0075429_100365151	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300007255\|Ga0099791_10379002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	680	Open in IMG/M
3300007255\|Ga0099791_10647638	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	518	Open in IMG/M
3300007258\|Ga0099793_10418831	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300009012\|Ga0066710_101820971	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	918	Open in IMG/M
3300009012\|Ga0066710_104194327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300009090\|Ga0099827_10495838	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1049	Open in IMG/M
3300009137\|Ga0066709_100443013	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1814	Open in IMG/M
3300010126\|Ga0127482_1162912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300010304\|Ga0134088_10170607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1038	Open in IMG/M
3300010304\|Ga0134088_10477158	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300010323\|Ga0134086_10029987	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1786	Open in IMG/M
3300010329\|Ga0134111_10233126	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	751	Open in IMG/M
3300010333\|Ga0134080_10062812	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1478	Open in IMG/M
3300010336\|Ga0134071_10302852	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300010336\|Ga0134071_10769750	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300010360\|Ga0126372_12771928	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	542	Open in IMG/M
3300011269\|Ga0137392_10952017	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300011435\|Ga0137426_1142584	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	699	Open in IMG/M
3300011444\|Ga0137463_1015580	All Organisms → cellular organisms → Bacteria	2673	Open in IMG/M
3300012198\|Ga0137364_10151547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1676	Open in IMG/M
3300012198\|Ga0137364_10265937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1269	Open in IMG/M
3300012200\|Ga0137382_10407447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	959	Open in IMG/M
3300012203\|Ga0137399_10149953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1862	Open in IMG/M
3300012203\|Ga0137399_10441419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1088	Open in IMG/M
3300012204\|Ga0137374_10979679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300012208\|Ga0137376_10678443	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	889	Open in IMG/M
3300012209\|Ga0137379_10315402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1474	Open in IMG/M
3300012209\|Ga0137379_10428481	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1232	Open in IMG/M
3300012210\|Ga0137378_11699781	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012211\|Ga0137377_10668014	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	974	Open in IMG/M
3300012285\|Ga0137370_10195290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1185	Open in IMG/M
3300012285\|Ga0137370_10288882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	977	Open in IMG/M
3300012350\|Ga0137372_10079244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2801	Open in IMG/M
3300012354\|Ga0137366_10599474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	790	Open in IMG/M
3300012355\|Ga0137369_10137447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1954	Open in IMG/M
3300012356\|Ga0137371_10446741	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1001	Open in IMG/M
3300012358\|Ga0137368_10395906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	908	Open in IMG/M
3300012359\|Ga0137385_10497922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1031	Open in IMG/M
3300012359\|Ga0137385_11284619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	594	Open in IMG/M
3300012363\|Ga0137390_11889850	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012371\|Ga0134022_1123851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300012386\|Ga0134046_1147025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300012405\|Ga0134041_1073385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300012683\|Ga0137398_10449460	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300012917\|Ga0137395_10167573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1513	Open in IMG/M
3300012924\|Ga0137413_11706679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300012929\|Ga0137404_10180120	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1778	Open in IMG/M
3300012944\|Ga0137410_10184745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1606	Open in IMG/M
3300012944\|Ga0137410_11129879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	672	Open in IMG/M
3300012948\|Ga0126375_11184086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	635	Open in IMG/M
3300012976\|Ga0134076_10299433	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300014154\|Ga0134075_10200752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300014154\|Ga0134075_10404969	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300014157\|Ga0134078_10237309	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300015264\|Ga0137403_10352921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1357	Open in IMG/M
3300015356\|Ga0134073_10037265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1251	Open in IMG/M
3300015372\|Ga0132256_101536585	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	776	Open in IMG/M
3300017656\|Ga0134112_10258406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	692	Open in IMG/M
3300018082\|Ga0184639_10392075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	718	Open in IMG/M
3300018084\|Ga0184629_10347624	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300018433\|Ga0066667_10549606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	958	Open in IMG/M
3300019279\|Ga0184642_1282182	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1222	Open in IMG/M
3300021046\|Ga0215015_10067967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1551	Open in IMG/M
3300021951\|Ga0222624_1158310	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1210	Open in IMG/M
3300025910\|Ga0207684_10026491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4942	Open in IMG/M
3300026307\|Ga0209469_1103451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	773	Open in IMG/M
3300026308\|Ga0209265_1117228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M
3300026310\|Ga0209239_1236236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300026324\|Ga0209470_1039165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2358	Open in IMG/M
3300026325\|Ga0209152_10159095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	853	Open in IMG/M
3300026332\|Ga0209803_1058181	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1682	Open in IMG/M
3300026333\|Ga0209158_1021618	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2898	Open in IMG/M
3300026342\|Ga0209057_1057083	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1792	Open in IMG/M
3300026524\|Ga0209690_1036828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2297	Open in IMG/M
3300026540\|Ga0209376_1358367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	549	Open in IMG/M
3300026548\|Ga0209161_10015560	All Organisms → cellular organisms → Bacteria	5593	Open in IMG/M
3300026548\|Ga0209161_10574884	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300027671\|Ga0209588_1057275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1260	Open in IMG/M
3300027775\|Ga0209177_10338474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300027903\|Ga0209488_11045927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	562	Open in IMG/M
3300028884\|Ga0307308_10408993	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300030997\|Ga0073997_11867482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	533	Open in IMG/M
3300031576\|Ga0247727_10097494	All Organisms → cellular organisms → Bacteria	3112	Open in IMG/M
3300031949\|Ga0214473_11477111	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	687	Open in IMG/M
3300032180\|Ga0307471_101793821	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	765	Open in IMG/M
3300032955\|Ga0335076_11687463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	522	Open in IMG/M
3300033417\|Ga0214471_10242459	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300034177\|Ga0364932_0241775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	683	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.88%
Host-Associated	Host-Associated	3.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.19%
Aquatic	Environmental → Aquatic	4.69%
Plants	Host-Associated → Plants	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.62%
Sediment	Environmental → Aquatic → Sediment	3.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.12%
Freshwater	Environmental → Aquatic → Freshwater	1.56%
Cave	Environmental → Terrestrial → Cave	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.59%
Loam	Environmental → Terrestrial → Soil → Loam	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.56%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101184422	3300002558	Grasslands Soil	GPALGVPEIGATLLFGGLFLLSFGWFGARYPMLSPRLAADTLERERH*
JGI25389J43894_10368963	3300002916	Grasslands Soil	EIVPSINGGAGPALGVPEIGATLLFGGLFLLSFGWFGALFLLSFGWFGARYPMLSPRLAADTLERERH*
Ga0066674_101685361	3300005166	Soil	IGVALFFGGLFFLSWAWFAGRYPIISPRLAANALEREHH*
Ga0066673_106463582	3300005175	Soil	PEIGVTLLFAGLFLLSYGWFGSRYPMLSPRLAADTLERERH*
Ga0066684_108369272	3300005179	Soil	GLPETASTLLFGGLFLLSYGWFGGRYPMLSPRLAADALERERH*
Ga0066685_101541001	3300005180	Soil	EVGVTLLFGGLYLLAIGWFAARFPMISPRLAADTLEREQH*
Ga0066678_102986851	3300005181	Soil	GLPEVGVTLLFGGLFLLSFGWFGARYPMLSPRLAADTLERERH*
Ga0070703_100149004	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	EIGVALLFGGLFLASLGWFGARYPMLSPRLAADALERERH*
Ga0070681_108208873	3300005458	Corn Rhizosphere	EVGTTLFFAGLFFLSWAWFAGRYPIVSPRLAADALEREAH*
Ga0070699_1019549182	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EIGTGLFFLGLFLLAWAWFASRYPMVSPRLAEDALEREHH*
Ga0070697_1000968334	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LTEAGVTLFFAGLFFLSWAWFAGRYPIISPRLAADALQRAPH*
Ga0070697_1003873693	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LTEAGVTLFFAGLFFLSWAWFAGRYPIISPRLAADALQREPH*
Ga0066697_106175232	3300005540	Soil	AVGIPEIGVTLLYGGLFLLSMAWFALRYPMISPRLAADTLEREAH*
Ga0070696_1006856781	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	EVGMALFFGGLFLLSWGWFAGRYPIISPRLAADALEREHH*
Ga0066701_100467594	3300005552	Soil	ELGVTLLFGGLYLLAIGWFAARFPMISPRLAADTLEREQH*
Ga0066661_108743982	3300005554	Soil	LLFGGLFLAALGWFGARYPMLSPRLAADAVERERH*
Ga0066692_101631533	3300005555	Soil	PELGVTLLFGGLYLLAIGWFAARFPMISPRLAADTLEREQH*
Ga0066692_104857181	3300005555	Soil	GIPEVGVALLFGGLYLLSIAWFAGRYPMISPRLAADTLEREQH*
Ga0066692_108351032	3300005555	Soil	LLFGGLFLASLGWFGARYPMLSPRLAADALERERH*
Ga0066704_102016404	3300005557	Soil	PAIGLPELGVTALFGGLYLLSIAWFAARRPMLSPRLAADTLEREQH*
Ga0066700_101061901	3300005559	Soil	TLLFGGLFLLSLGWFGARYPMLSPRLAADTLERERH*
Ga0066705_104462081	3300005569	Soil	INGGAGPAIGLPEDGVTLLFGGLFLLSLGWFGARYPMLSPRLAADTLEREGH*
Ga0066694_100178955	3300005574	Soil	GVTALFAGLYLLSIAWFAARRPMLSPRLAADTLEREAH*
Ga0066694_100546391	3300005574	Soil	AGVTLLFAGLFLLAMGWFATRYPMISPRLAADTLQREAH*
Ga0066691_100578324	3300005586	Soil	GVALFFGGLFFLSWAWFAGRYPIISPRLAANALEREHH*
Ga0066654_104334012	3300005587	Soil	GAGPALGVPEIGVALLFGGLFLLSLGWFGARYPMLSPRLAADAVERERH*
Ga0066651_102249551	3300006031	Soil	GAGPAIGVPELGVTALFAGLYLLSIAWFAARRPMLSPRLAADTLEREAH*
Ga0066696_104274153	3300006032	Soil	LGVPEIGVALLFGGLFLASLGWFGARYPMLSPRLAADAVERERH*
Ga0066656_111357641	3300006034	Soil	VTLFFAGLFFLSWGWFAGRYPIISPRLAADALQREQH*
Ga0066652_1002116221	3300006046	Soil	IGIPEIGVTLLYGGLFLLSMAWFALRYPMLSPRLAADTLEREAH*
Ga0079222_110856631	3300006755	Agricultural Soil	ATLLFGGLFVLSFGWFGARYPMLSPRLAADTVEREHH*
Ga0066665_106763351	3300006796	Soil	IGVTLLFAGLFLVSFGWFGARYPMLSPRLAADALERERH*
Ga0066659_103204801	3300006797	Soil	IGVTLLFAGLFLLSFGWFGARYPMLSPRLAADTLERERH*
Ga0066659_103606521	3300006797	Soil	GPALGVPEIGVALLFGGLFLLSLGWFGARYPMLSPRLAADAVERERH*
Ga0075433_109203773	3300006852	Populus Rhizosphere	FAGLFALSYSWFAGRYPMLSPRLAADTLDREHGH*
Ga0075434_1002421754	3300006871	Populus Rhizosphere	LLFAGLFILSWAFFASRYPIISPRLAADALEREQH*
Ga0075429_1003651514	3300006880	Populus Rhizosphere	GVPEVGTAMFFAGLFLLAWAWFAGRYPIISPRHAADALEREAH*
Ga0099791_103790021	3300007255	Vadose Zone Soil	VTVLFGGLFLLAMGWFATRYPMISPRLAADTLEREQH*
Ga0099791_106476382	3300007255	Vadose Zone Soil	LFFGGLFFISWAWFARKYPIISPRLAADALEREQH*
Ga0099793_104188312	3300007258	Vadose Zone Soil	FFGGLFFLSWAWFANRYPIISPRLAADALEREQH*
Ga0066710_1018209712	3300009012	Grasslands Soil	GPELGVTLLFGGLYLLAIGWFAARFPMISPRLAADTLEREQH
Ga0066710_1041943272	3300009012	Grasslands Soil	GPELGVTLLFGGLYLLAIGWFAARFPMISPRLAADTLERERH
Ga0099827_104958381	3300009090	Vadose Zone Soil	LFFGGLFFLAWAWFAGRYPIISPRLAANALEREHH*
Ga0066709_1004430134	3300009137	Grasslands Soil	LFFAGVFFLSWAWFARRYPIISPRLAADALEREQH*
Ga0127482_11629123	3300010126	Grasslands Soil	PALGMPEVGVTLLFAGLFLLSLGWFGARYPMLSPRLAADTLERERH*
Ga0134088_101706071	3300010304	Grasslands Soil	LLFGGLFLLSLGWFGARYPMLSPRLAADTLERERH*
Ga0134088_104771582	3300010304	Grasslands Soil	LPELGVTALFGGLFLLSLGWFAARYPMVSPRLAADTLEREHH*
Ga0134086_100299874	3300010323	Grasslands Soil	GVTLFFGGLFCMSWAWFASRYPIISPRLAADALEREQH*
Ga0134111_102331262	3300010329	Grasslands Soil	PELGVTVLFGGLFLMAMGWFGARYPMISPRLAADTLEREAH*
Ga0134080_100628123	3300010333	Grasslands Soil	GVTLLFGGLFLLSLGWFGARYPMLSPRLAADTLERERH*
Ga0134071_103028523	3300010336	Grasslands Soil	FFGGLFFLSWAWFAGRYPIISPRLAANALEREHH*
Ga0134071_107697502	3300010336	Grasslands Soil	SINGGAGPAIGVPELGVTALFAGLYFLCIAWFAARRPMLSPRLAADTLERESH*
Ga0126372_127719282	3300010360	Tropical Forest Soil	HGPITSVLFFGGLFALSYSWFAGRYPMVSPRLAADTLEREHGH*
Ga0137392_109520171	3300011269	Vadose Zone Soil	TLLFGGLFLLSFGWFGGRYPMLSPRLAADTLERERH*
Ga0137426_11425841	3300011435	Soil	PAIGVPEIGTTLLFGGLFLLALGWFAGRYPMLSPRLAADTLEREAH*
Ga0137463_10155805	3300011444	Soil	GVPELGAVLFFGGLYALSYSWFAGRYPMISPRLAADTLEREHGH*
Ga0137364_101515473	3300012198	Vadose Zone Soil	LLYSGLFLLSMAWFALRYPMISPRLAADTLEREAH*
Ga0137364_102659371	3300012198	Vadose Zone Soil	EIGVTLFFGGVFLLAWAWFAARYPIISPRLAADALEREAH*
Ga0137382_104074473	3300012200	Vadose Zone Soil	IGIPEVGVTLLYSGLFLLSMAWFALRYPMISPRSASDTLEREAY*
Ga0137399_101499531	3300012203	Vadose Zone Soil	PEVGVALFFGGLFLLSWTWFASRYPIISPRLAADALEREQH*
Ga0137399_104414193	3300012203	Vadose Zone Soil	LPEIGATLLFGGLFLLSFGWFGARYPMLSPRLAADTLERERH*
Ga0137374_109796792	3300012204	Vadose Zone Soil	GVTALFAGLYLLSIAWFAARRPMLSPRLAADTLERESH*
Ga0137376_106784431	3300012208	Vadose Zone Soil	IGVTLLYGGLFLLSMAWFALRYPMISPRLAADTLEREAH*
Ga0137379_103154023	3300012209	Vadose Zone Soil	LFGGLFLLSIAWFARRDPMISPRLAADTLEREAH*
Ga0137379_104284811	3300012209	Vadose Zone Soil	LFAGLYLLSIAWFAARRPMLSPRLAADTLERESH*
Ga0137378_116997812	3300012210	Vadose Zone Soil	AGGLCFAGLFLLAYAWFAGRYPMLSPRLAADTLEREHH*
Ga0137377_106680144	3300012211	Vadose Zone Soil	APVLGVPEIGVALLFGGLFLASLGWFAARYPMLSPRLAADALERERH*
Ga0137370_101952903	3300012285	Vadose Zone Soil	VPELGVTALFAGLYFLSIAWFAARRPMLSPRLAADTLEREQH*
Ga0137370_102888823	3300012285	Vadose Zone Soil	EIGVALLFGGLFLASLGWFGARYPMLSPRLAADAVERERH*
Ga0137372_100792441	3300012350	Vadose Zone Soil	VTALFAGLYLLSIAWFAARRPMLSPRLAADTLERESH*
Ga0137367_105861642	3300012353	Vadose Zone Soil	PSINNGAGPAIGVPELGVTALFAGLYLLSIAWFAARRPMLSPRLAADTLERESH*
Ga0137366_105994741	3300012354	Vadose Zone Soil	AIGLPEAGVTLLFGGLFLLSLGWFGARYPMLSPRLAADTLERERH*
Ga0137369_101374471	3300012355	Vadose Zone Soil	LFFAGLFLLAWAWFAGRYPIISPRLAADALEREAH*
Ga0137371_104467413	3300012356	Vadose Zone Soil	LTEAGVTLFFAGLFFLSWGWFAGRYPIISPRLAADALEREQH*
Ga0137368_103959061	3300012358	Vadose Zone Soil	EIGVTLLFGGLFLSSLGWFAARYPMLSPRLAADTLERERH*
Ga0137385_104979221	3300012359	Vadose Zone Soil	AGVTLLFGGLFLLSLGWFGARYPMLSPRLAADTLERERH*
Ga0137385_112846192	3300012359	Vadose Zone Soil	GPAIGIPELGVTCFFGGLYLLSIAWFAGRYPMLSPRLAADTLEREQH*
Ga0137390_118898502	3300012363	Vadose Zone Soil	VALFFGGLFFLSWAWFASRYPIISPRLAADALEREQH*
Ga0134022_11238512	3300012371	Grasslands Soil	GVTLLFGGLFLVSLGWFGARYPMLSPRLAADTLERERH*
Ga0134046_11470253	3300012386	Grasslands Soil	PAIGVPEIGVTLLFGGLFLLSFGWFGARYPMLSPRLAADTLERERH*
Ga0134041_10733851	3300012405	Grasslands Soil	IGVALLFGGLFLASLGWFGARYPMLSPRLAADAVERERH*
Ga0137398_104494601	3300012683	Vadose Zone Soil	VMLLGVFLLAYGAFARKYPMVSPRLAADTLEREDSH*
Ga0137395_101675733	3300012917	Vadose Zone Soil	VTLLFAGLFLLSFGWFGGRYPMLSPRLAADTLERERH*
Ga0137413_117066792	3300012924	Vadose Zone Soil	VTLLFGGLFLLSFGWFGGRYPMLSPRLAADTLERERH*
Ga0137404_101801201	3300012929	Vadose Zone Soil	VTLLFGGLFLLSFGWFGACYPMLSPRLAADTLERERH*
Ga0137410_101847453	3300012944	Vadose Zone Soil	FFAGLFLLSWAWFAARYPIISPRLAADALEREQH*
Ga0137410_111298791	3300012944	Vadose Zone Soil	PEVGVALFFGGLFLLSWTWFASRYPIISPRLAADALEREGH*
Ga0126375_111840861	3300012948	Tropical Forest Soil	ELGGLLFFSGLYALSYSWFAGRYPMISPRLAADTLEREHGH*
Ga0134110_104353082	3300012975	Grasslands Soil	VPSINGGAGPAIGLPEIAVTSLFGGLFLLSLGWFAARYPMLSPRLAADTLERERH*
Ga0134076_102994333	3300012976	Grasslands Soil	GVTLLFGGLFLLSFGWFGARYPMLSPRLAADTLERERH*
Ga0134075_102007521	3300014154	Grasslands Soil	VPSINGGAGPAIGVPELGVTALFAGLYFLSIAWFAARRPMLSPRLAA
Ga0134075_104049691	3300014154	Grasslands Soil	TALFGGLFLLSLGWFAARYPMVSPRLAADTLEREHH*
Ga0134078_102373093	3300014157	Grasslands Soil	AGPASGVPEVGVTLLFGGLFLLSFGWFGARYPMLSPRLAADTLERERH*
Ga0137403_103529213	3300015264	Vadose Zone Soil	LGVPEVGVTLLFAGLFLLSLGWFGARYPMLSPRLAADTLERERH*
Ga0134073_100372651	3300015356	Grasslands Soil	PEIGVTLLYGGLFLLSMAWFALRYPMISPRLAADTLEREAH*
Ga0132256_1015365852	3300015372	Arabidopsis Rhizosphere	VGMALFFGGLFLLSWGWFAGRYPIISPRLAADALEREHH*
Ga0134112_102584062	3300017656	Grasslands Soil	GVPEIAVTLLFGGLFLLSYGWFGARYPMLSPRLAADTLHREHH
Ga0184639_103920752	3300018082	Groundwater Sediment	FFGGLYALSVAWFAGRYPMISPRLAADTLEREHGH
Ga0184629_103476243	3300018084	Groundwater Sediment	ALFFGGLFLLSWAWFAGRYPIISPRLAADALEREQH
Ga0066667_101396461	3300018433	Grasslands Soil	PSINGGAGPAIGIPEIGVTLLYGGLFLLSMAWFALRYPMLSPRLAADTLEREAH
Ga0066667_105496063	3300018433	Grasslands Soil	VPEIGVTLLFAGLFLLSYGWFGSRYPMLSPRLAADTLERERH
Ga0184642_12821821	3300019279	Groundwater Sediment	VGVTLLFGGLFLLSIGWFGARYPMLSPRLAADTLERERH
Ga0215015_100679672	3300021046	Soil	VLIFGGLFLLSYGWFGARYPMPSRRLAADTLEREHH
Ga0222624_11583101	3300021951	Groundwater Sediment	EIGTGVFFLGLFLLAWAWFASRYPMVSPRLAADALEREAP
Ga0207684_100264916	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EIGVTLLFGGLFLLSFGWFGARYPMLSPRLAADTLERERH
Ga0209469_11034512	3300026307	Soil	AGPAIGVPELGVTALFAGLYLLSIAWFAARRPMLSPRLAADTLEREAH
Ga0209265_11172281	3300026308	Soil	GGAGPALGVPEIGVALLFGGLFLLSLGWFGARYPMLSPRLAADAVERERH
Ga0209239_12362362	3300026310	Grasslands Soil	GVTLLFGGLFLLSFGWFAGRYPMLSPRLAADTLEREHH
Ga0209470_10391654	3300026324	Soil	VTLFFGGLFCMSWAWFASRYPIISPRLAADALEREQH
Ga0209152_101590953	3300026325	Soil	AGPAIGLPELGVTALFGGLYLLSIAWFAARRPMLSPRLAADTLEREQH
Ga0209803_10581813	3300026332	Soil	EIGATLLFGGLFLLSFGWFGARYPMLSPRLAADTLERERH
Ga0209158_10216181	3300026333	Soil	NGGAGPAIGLPELGVTALFGGLYLLSIAWFAARRPMLSPRLAADTLEREQH
Ga0209057_10570831	3300026342	Soil	VPEIGVTLLFAGLFLLSYGWFGARYPMLSPRLAVDTLERERH
Ga0209690_10368285	3300026524	Soil	LGLPELGVTALFGGLFLLSLGWFAARYPMLSPRLAADTLERENH
Ga0209376_13583671	3300026540	Soil	TALFAGLYLLSIAWFAARRPMLSPRLAADTLEREAH
Ga0209161_100155608	3300026548	Soil	PELGATLLFAGLFLLSFGWFGARYPMLSPRLAADAIEREQH
Ga0209161_105748842	3300026548	Soil	LGGPELGVTLLFGGLYLLAIGWFAARFPMISPRLAADTLERERH
Ga0209588_10572753	3300027671	Vadose Zone Soil	IGVPEIGVTLLFGGLFLLSFGWFGGRYPMLSPRLAADTLERERH
Ga0209177_103384741	3300027775	Agricultural Soil	SVNGGAGPAIGLPELAATLLFGGLFVLSLGWFGARYPMLSPRLAADTVEREHH
Ga0209488_110459272	3300027903	Vadose Zone Soil	GVFFLGLFLISWAWFARKYPIISPRLSADALEREAH
Ga0307308_104089931	3300028884	Soil	VTLFFGGLFFMSWAWFASRYPIISPRLAADALEREHH
Ga0073997_118674822	3300030997	Soil	GVTLLFGGLFLLAFGWFAARYPMLSPRLAADTLEREAH
Ga0247727_100974941	3300031576	Biofilm	VTLFFLGLFLLAYAAFAARYPMVSPRLAADTIEREQH
Ga0214473_114771111	3300031949	Soil	VALLFFGLFLLSLAWFASRYPMLSPRLAADTLEREGH
Ga0307471_1017938213	3300032180	Hardwood Forest Soil	GVPEIGVTLLFGGLFLLSLGWFGARYPMLSPRLAADTLERERH
Ga0335076_116874632	3300032955	Soil	PEIGVTLLYLGLFLLALGWFAKRYPLISPRLAADTLEREAH
Ga0214471_102424591	3300033417	Soil	TALFFGGLFLLAWAWFAARYPIVSPRLAADALERERH
Ga0364932_0241775_1_108	3300034177	Sediment	FFGGLYALSVAWFAGRYPMLSPRLAADTLEREHGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064610

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences