Metagenome / Metatranscriptome Family F064540

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064540
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	59 residues
Representative Sequence	VLFFELFPAFITIVATTIAVALFIVARRRRHDPERPLETRDPNRTDAGKGTRFTRPSMRG
Number of Associated Samples	111
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	32.81 %
% of genes near scaffold ends (potentially truncated)	23.44 %
% of genes from short scaffolds (< 2000 bps)	88.28 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.969 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.938 % of family members)
Environment Ontology (ENVO)	Unclassified (39.062 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.562 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.95% β-sheet: 0.00% Coil/Unstructured: 67.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00291	PALP	32.03
PF13192	Thioredoxin_3	19.53
PF14522	Cytochrome_C7	4.69
PF00072	Response_reg	3.12
PF00939	Na_sulph_symp	2.34
PF00587	tRNA-synt_2b	1.56
PF03600	CitMHS	0.78
PF05960	DUF885	0.78
PF01645	Glu_synthase	0.78
PF11821	ActD	0.78
PF02518	HATPase_c	0.78
PF13361	UvrD_C	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	2.34
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	2.34
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.78
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.78
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.75 %
Unclassified	root	N/A	31.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.75 %
Unclassified	root	N/A	31.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.97 %
Unclassified	root	N/A	31.25 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	45.31 %
Unclassified	root	N/A	31.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	32.03 %
Unclassified	root	N/A	31.25 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	5.47 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.03 %
Unclassified	root	N/A	31.25 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	5.47 %
Bigyra	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Bigyra	0.78 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.78 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.03 %
Unclassified	root	N/A	31.25 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	5.47 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Labyrinthulomycetes	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Bigyra → Labyrinthulomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.03 %
Unclassified	root	N/A	31.25 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	5.47 %
Thraustochytrida	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Bigyra → Labyrinthulomycetes → Thraustochytrida	0.78 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.03 %
Unclassified	root	N/A	31.25 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	5.47 %
Thraustochytriaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Bigyra → Labyrinthulomycetes → Thraustochytrida → Thraustochytriaceae	0.78 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.03 %
Unclassified	root	N/A	31.25 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	5.47 %
Hondaea	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Bigyra → Labyrinthulomycetes → Thraustochytrida → Thraustochytriaceae → Hondaea	0.78 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.03 %
Unclassified	root	N/A	31.25 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	5.47 %
Hondaea fermentalgiana	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Bigyra → Labyrinthulomycetes → Thraustochytrida → Thraustochytriaceae → Hondaea → Hondaea fermentalgiana	0.78 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105389847	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105899617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300000571\|JGI1358J11329_10069489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300003321\|soilH1_10317065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1037	Open in IMG/M
3300003324\|soilH2_10315742	All Organisms → cellular organisms → Bacteria → Acidobacteria	1119	Open in IMG/M
3300003992\|Ga0055470_10119092	Not Available	669	Open in IMG/M
3300004114\|Ga0062593_100492438	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300004114\|Ga0062593_101977378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300004156\|Ga0062589_102045983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300004463\|Ga0063356_100732887	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300005093\|Ga0062594_101410141	Not Available	708	Open in IMG/M
3300005184\|Ga0066671_10302166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1004	Open in IMG/M
3300005289\|Ga0065704_10552650	Not Available	592	Open in IMG/M
3300005328\|Ga0070676_10066943	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300005329\|Ga0070683_100307180	Not Available	1509	Open in IMG/M
3300005330\|Ga0070690_100124551	Not Available	1733	Open in IMG/M
3300005331\|Ga0070670_100510469	Not Available	1070	Open in IMG/M
3300005332\|Ga0066388_101145749	Not Available	1322	Open in IMG/M
3300005343\|Ga0070687_101497733	Not Available	507	Open in IMG/M
3300005344\|Ga0070661_101939509	Not Available	501	Open in IMG/M
3300005345\|Ga0070692_10290210	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300005354\|Ga0070675_100609721	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005355\|Ga0070671_100010508	All Organisms → cellular organisms → Bacteria → Acidobacteria	7429	Open in IMG/M
3300005355\|Ga0070671_101683970	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005356\|Ga0070674_100945117	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005366\|Ga0070659_101282154	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300005457\|Ga0070662_101340339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300005459\|Ga0068867_100891956	Not Available	799	Open in IMG/M
3300005471\|Ga0070698_101076786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	752	Open in IMG/M
3300005535\|Ga0070684_101990105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005615\|Ga0070702_100952295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300005764\|Ga0066903_109129702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005836\|Ga0074470_11745131	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Bigyra → Labyrinthulomycetes → Thraustochytrida → Thraustochytriaceae → Hondaea → Hondaea fermentalgiana	849	Open in IMG/M
3300006797\|Ga0066659_10368508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300006844\|Ga0075428_101994952	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300006854\|Ga0075425_100089270	All Organisms → cellular organisms → Bacteria	3492	Open in IMG/M
3300006854\|Ga0075425_101188571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	867	Open in IMG/M
3300006969\|Ga0075419_11095568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300009012\|Ga0066710_100495964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1839	Open in IMG/M
3300009094\|Ga0111539_10061518	All Organisms → cellular organisms → Bacteria	4448	Open in IMG/M
3300009137\|Ga0066709_100788903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300009162\|Ga0075423_11686251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300009225\|Ga0103851_1001126	All Organisms → cellular organisms → Bacteria → Acidobacteria	3024	Open in IMG/M
3300009239\|Ga0103858_10050250	Not Available	984	Open in IMG/M
3300009660\|Ga0105854_1235528	Not Available	619	Open in IMG/M
3300010362\|Ga0126377_10199027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1919	Open in IMG/M
3300010364\|Ga0134066_10249573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300010400\|Ga0134122_11248343	Not Available	747	Open in IMG/M
3300010403\|Ga0134123_13271994	Not Available	522	Open in IMG/M
3300011119\|Ga0105246_10686748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300011444\|Ga0137463_1112002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1026	Open in IMG/M
3300012200\|Ga0137382_10305725	Not Available	1110	Open in IMG/M
3300012208\|Ga0137376_11004985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300012212\|Ga0150985_113927757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300012285\|Ga0137370_10794827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012360\|Ga0137375_11095522	Not Available	618	Open in IMG/M
3300012511\|Ga0157332_1082751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012944\|Ga0137410_11894508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300012951\|Ga0164300_10149061	Not Available	1093	Open in IMG/M
3300012957\|Ga0164303_11242902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012960\|Ga0164301_10549016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300012986\|Ga0164304_10654753	Not Available	792	Open in IMG/M
3300012989\|Ga0164305_10984539	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300013296\|Ga0157374_12779190	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300013297\|Ga0157378_10979574	Not Available	879	Open in IMG/M
3300014262\|Ga0075301_1106429	Not Available	613	Open in IMG/M
3300014745\|Ga0157377_10299689	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300014969\|Ga0157376_11909580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300015245\|Ga0137409_10508290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300015371\|Ga0132258_10692896	All Organisms → cellular organisms → Bacteria	2564	Open in IMG/M
3300015371\|Ga0132258_11970068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1470	Open in IMG/M
3300015371\|Ga0132258_13700091	Not Available	1043	Open in IMG/M
3300015372\|Ga0132256_100232569	Not Available	1904	Open in IMG/M
3300015373\|Ga0132257_101982949	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300015373\|Ga0132257_103180287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300018064\|Ga0187773_10059172	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300018071\|Ga0184618_10141902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300018083\|Ga0184628_10011680	All Organisms → cellular organisms → Bacteria	4242	Open in IMG/M
3300018083\|Ga0184628_10269670	Not Available	894	Open in IMG/M
3300018433\|Ga0066667_10502728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	999	Open in IMG/M
3300018482\|Ga0066669_10609711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	957	Open in IMG/M
3300019362\|Ga0173479_10490170	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300021073\|Ga0210378_10111954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1061	Open in IMG/M
3300021082\|Ga0210380_10078195	Not Available	1449	Open in IMG/M
3300021445\|Ga0182009_10007541	All Organisms → cellular organisms → Bacteria → Acidobacteria	3611	Open in IMG/M
3300021445\|Ga0182009_10177477	Not Available	1026	Open in IMG/M
3300021445\|Ga0182009_10388244	Not Available	719	Open in IMG/M
3300021953\|Ga0213880_10014163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1683	Open in IMG/M
3300025315\|Ga0207697_10459371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300025901\|Ga0207688_10112247	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300025918\|Ga0207662_10100276	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300025920\|Ga0207649_10617008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300025923\|Ga0207681_10338573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1201	Open in IMG/M
3300025926\|Ga0207659_10504057	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300025931\|Ga0207644_10258661	Not Available	1391	Open in IMG/M
3300025935\|Ga0207709_11515721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300025937\|Ga0207669_11175586	Not Available	649	Open in IMG/M
3300025940\|Ga0207691_10208528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1698	Open in IMG/M
3300025940\|Ga0207691_10275737	Not Available	1448	Open in IMG/M
3300025941\|Ga0207711_11373032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300025960\|Ga0207651_10346684	All Organisms → cellular organisms → Bacteria → Acidobacteria	1249	Open in IMG/M
3300025981\|Ga0207640_11697151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300026075\|Ga0207708_10969592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300026089\|Ga0207648_10568302	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300026116\|Ga0207674_10872112	Not Available	868	Open in IMG/M
3300027815\|Ga0209726_10014948	All Organisms → cellular organisms → Bacteria	7149	Open in IMG/M
3300027821\|Ga0209811_10012837	Not Available	2696	Open in IMG/M
3300027835\|Ga0209515_10019114	All Organisms → cellular organisms → Bacteria	6649	Open in IMG/M
3300028381\|Ga0268264_10164959	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300028381\|Ga0268264_10552214	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300028803\|Ga0307281_10016196	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300031152\|Ga0307501_10248927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300031170\|Ga0307498_10168652	Not Available	741	Open in IMG/M
3300031199\|Ga0307495_10095026	Not Available	697	Open in IMG/M
3300031226\|Ga0307497_10035729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1654	Open in IMG/M
3300031226\|Ga0307497_10170466	Not Available	920	Open in IMG/M
3300031366\|Ga0307506_10259410	Not Available	664	Open in IMG/M
3300031720\|Ga0307469_10951756	Not Available	799	Open in IMG/M
3300031720\|Ga0307469_11171704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	725	Open in IMG/M
3300032174\|Ga0307470_10157529	Not Available	1398	Open in IMG/M
3300032179\|Ga0310889_10366019	Not Available	709	Open in IMG/M
3300032205\|Ga0307472_100361422	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300032205\|Ga0307472_100378187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300033004\|Ga0335084_10006188	All Organisms → cellular organisms → Bacteria → Acidobacteria	11878	Open in IMG/M
3300033004\|Ga0335084_10146976	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300033158\|Ga0335077_11218544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300033433\|Ga0326726_10111882	Not Available	2456	Open in IMG/M
3300033433\|Ga0326726_10289055	Not Available	1535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.28%
Host-Associated	Host-Associated	36.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.12%
Plants	Host-Associated → Plants	36.72%
Aquatic	Environmental → Aquatic	10.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.50%
Freshwater	Environmental → Aquatic → Freshwater	5.47%
Sediment	Environmental → Aquatic → Sediment	3.91%
Peat	Environmental → Terrestrial → Peat	1.56%
Marine	Environmental → Aquatic → Marine	0.78%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.16%
Loam	Environmental → Terrestrial → Soil → Loam	8.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.91%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.12%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	2.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.56%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000571	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009225	Microbial communities of water from Amazon river, Brazil - RCM4	Environmental	Open in IMG/M
3300009239	Microbial communities of water from Amazon river, Brazil - RCM11	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1053898472	3300000364	Soil	VLFFELFPALITVVATAIAVALFIVARRRKGQPERKPEMRDPNRRDSAHGTRFTRPSMRG
INPhiseqgaiiFebDRAFT_1058996173	3300000364	Soil	VLFFELFPAFITIVAATIAIALFIVARRRRADPERKLEQRDPNRPDASTGPRFTRPSMRG
JGI1358J11329_100694891	3300000571	Groundwater	VLFFELFPAFITIVATSIAVALFVVSRRRRGTPERPLERPNPSRPSQDKGRRIV
soilH1_103170652	3300003321	Sugarcane Root And Bulk Soil	MLFFELFPILITVVATTIAVILFIVARKRRNDPERRREQRDPNRKDPETGTRFTRPSMRG
soilH2_103157422	3300003324	Sugarcane Root And Bulk Soil	MLFFELFPIFITVVATTIAIVLFIVARKRRHDPERRREQRDPDRKDSEPGTRFTRPSMRG
Ga0055470_101190921	3300003992	Natural And Restored Wetlands	VLFFELFPLVITIVATTIAIALFVVARRRRNDPERKPELRDPNRNDRDIGSRFTRPSMRG
Ga0062593_1004924382	3300004114	Soil	VLFFELFPIFVTVVATTIAVALFIVARRRRNDPERRRELRDPTRSDDEKGARFTRPSMRG
Ga0062593_1019773782	3300004114	Soil	FFELFPVFITIVATTIAVALFIIARRRKGQPERKREMRDPTRKSAAKGARFTRPSMRG*
Ga0062589_1020459832	3300004156	Soil	VLFFELFPAFITVVATAIAVALFVIARRRKGQPERTREMRDPNRGRAAKGTRFTRPSMRG
Ga0063356_1007328872	3300004463	Arabidopsis Thaliana Rhizosphere	VLFFELFPAFITVVATAIAVALFIIARRRKGQPERPPEMRDPNNEGRAAQGTRFTRPSMRG*
Ga0062594_1014101411	3300005093	Soil	VLFFELFPAFITVIATAIAVVLFIIARRRKGQPERTREMRDPNGGSAAQGTRFTRPSMRG
Ga0066671_103021663	3300005184	Soil	VLFFELFPIVITVVATSIAIALFVVARRRRGHPERKLEERDPARPDAKTGTRFTRPSMRG
Ga0065704_105526502	3300005289	Switchgrass Rhizosphere	VLFFELFPAFITIVATTIAVVLFIVARRRKGQPERKREMRDPNRKSAAKGARFTRPSMRG
Ga0070676_100669434	3300005328	Miscanthus Rhizosphere	ITVVATAIAVALFIIARRRKGQAERPPEMRDPNNEGRAAQGTRFTRPSMRG*
Ga0070683_1003071802	3300005329	Corn Rhizosphere	VLFFELFPILFTVVSTATAIALFVVARRRRGHPERPLELRDPTRPDAASGAGARITRSSMRG*
Ga0070690_1001245511	3300005330	Switchgrass Rhizosphere	VLFFELFPVFITIVATTIAVALFIVARRRKGQPERKREMRDPTQKSDARGARFTRPSMRG
Ga0070670_1005104691	3300005331	Switchgrass Rhizosphere	VLFFELFPAFITVVATAIAVALFIIARRRKGQPERPPEMRDPNNEGRAAQGTRFTRP
Ga0066388_1011457492	3300005332	Tropical Forest Soil	MLFFELFPAFITVVASIIAVALFVVGRRRRGDPERNRELRDPNRTDAEGARFTRPSMRG*
Ga0070687_1014977331	3300005343	Switchgrass Rhizosphere	LFFELFPAFITIVATAIAVALFVVSRRRRGDPERSLELPDPSRPSKDDGRQIVRPSMRG*
Ga0070661_1019395091	3300005344	Corn Rhizosphere	MLFFELFPAVITIVATTIAIALFIVARRRRNDPERRREQRDPNQPGRDQGARFTRPSMRG
Ga0070692_102902103	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	AVTVLFFELFPAFITVIATAIAVVLFIIARRRKGQPERTREMRDPNGGSAAQGTRFTRPSMRG*
Ga0070675_1006097212	3300005354	Miscanthus Rhizosphere	MGVTVLLFELFPAFITIVATGIAVTLFVVSRRRRRGPERVLEQRDPARQSRDDGRRLTRPSMRG*
Ga0070671_1000105082	3300005355	Switchgrass Rhizosphere	VLFFELFPAFITVVATTIAVALFIIARRRKGDPEREREVRDPNRNRSEGARFTRPSMRG*
Ga0070671_1016839702	3300005355	Switchgrass Rhizosphere	VLFFELFPVFITVVATTIAVALFVIARRRKGDPERKREMRDPNRNPSEPGARFTRPSMRG
Ga0070674_1009451172	3300005356	Miscanthus Rhizosphere	VLFFELFPAFITIVATAVAVALFIVARRRKGHPEREREIRDPNRADGARGTRFTRPSMRG
Ga0070659_1012821542	3300005366	Corn Rhizosphere	VLFFELFPAFITVVATTIAVALFIIARRRKGDPEREREMRDPNRNRSDGARFTRPSMRG*
Ga0070662_1013403392	3300005457	Corn Rhizosphere	VFITIVATTIAVALFIVARRRKGQPERKREMRDPTQKSAAKGARLTRPSMRD*
Ga0068867_1008919562	3300005459	Miscanthus Rhizosphere	MLFFELFPAFITIVATTIAVALFVVARRRRHDPERTLETRDPNRNDAGKGTRYTRPSMRG
Ga0070698_1010767862	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	FITIVATATAVALFVVSRRRRSDPERSLEQPDPSRLSKDDGRPIVRSSMRG*
Ga0070684_1019901052	3300005535	Corn Rhizosphere	FFELFPILFTVVSTATAIALFVVARRRRGHPERPLELRDPTRPDAASGAGARISRSSMRG
Ga0070702_1009522952	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RGTVATGLAVTVLFFELFPAFITVIATAIAVVLFIIARRRKGQPERTREMRDPNGGSAAQGTRFTRPSMRG*
Ga0066903_1091297022	3300005764	Tropical Forest Soil	VLFFELFPIFITVVCTAIAIALFVIARRRRGQPERPLEMRDPSRADAGAGARITRSSMRG
Ga0074470_117451312	3300005836	Sediment (Intertidal)	VLLFELFPAFITIVATGIAVTLFVVSRRRRRDPERVLEERDPARKASDDGRRLTRPSMRG
Ga0066659_103685082	3300006797	Soil	VLFFELFPAFITIVATAIAVALFIVARRRPGHPERTLEVRDPNRRDSGSGTRVTRPSMRG
Ga0075428_1019949522	3300006844	Populus Rhizosphere	VLFFELFPAFITVIATAIAVVLFIIARRRKGQPERTPEMRDPNGARAAQGTRFTRPSMRG
Ga0075425_1000892703	3300006854	Populus Rhizosphere	VLFFELFPVFITVVATTIAVALFVVARRRKGDPERKREMRDPNRQPSEPGARFTRPSMRG
Ga0075425_1011885712	3300006854	Populus Rhizosphere	VLFFELFPVFITIVATTIAVALLIVARRRKGQPERKREMRDPTQKSDARGARFTRPSMRG
Ga0075419_110955682	3300006969	Populus Rhizosphere	VLFFELFPAFITVIATAIAVVLFIIARRRKGQPERTREMRDPNGARAAQGTRFTRPSMRG
Ga0066710_1004959641	3300009012	Grasslands Soil	MLFFELFPAFITIVATAIAVALFIVARRRRGHPERTPEVRDPNRRDSATGTRVTRPSMRG
Ga0111539_100615184	3300009094	Populus Rhizosphere	VLFFELFPAFITIVATAVAVALFIVARRRKGQPERERETRDPNRADGARGTRFTRPSMRG
Ga0066709_1007889034	3300009137	Grasslands Soil	VLFFELVPAFITIVAITIAIGLFIVARRRRADPERTLEQRDPNRPDVSTGRRFTRPSMRG
Ga0075423_116862512	3300009162	Populus Rhizosphere	VLFFELFPVFITIVATTIAVALFIVARRRKGQPERKREMRDPTQKSAAKGARLTRPSMRG
Ga0103851_10011263	3300009225	River Water	VLFFELFPAFITIVATSIAIALYIVGRRRRGQPERTLERRDPGRVDAEEGRRLTRPSMRG
Ga0103858_100502501	3300009239	River Water	VLFFELFPIFITVVCTAIAIGLFVMAWRRRGQPERPLEMRDPSRTDADAGPRITRSSMRG
Ga0105854_12355282	3300009660	Permafrost Soil	VLVFELFPVFITVVATTIAVALFVVSRRRRGTPDRPLERADPSRVSAEEGRPIPRSSMRG
Ga0126377_101990273	3300010362	Tropical Forest Soil	MLFFELFPAFITVVATAIAVALFIVSRRRGGEPDKPLELPDPARLGKDEGRRFVRPSMRG
Ga0134066_102495733	3300010364	Grasslands Soil	LFLELFPIFITVVAASIAVALFIIARRRRGHPERALERRDPNRRDAGTGPRFTRPSMRG*
Ga0134122_112483432	3300010400	Terrestrial Soil	MLFFELFPAFITVVATTIAVALFVVARRRRHDPERTLETRDPNRTDAGKGTRYTRPSMRG
Ga0134123_132719942	3300010403	Terrestrial Soil	VLFFELFPAFITVVATAIAVALFIIARRRKGQAERPPEMRDPNNEGRAAQGTRFTRPSMRG*
Ga0105246_106867482	3300011119	Miscanthus Rhizosphere	MLFFELFPAFITIVATAIAITLFVVSRRRRGDPERPLEQPDPSRPSRDDGRRIVRSSMRG
Ga0137463_11120021	3300011444	Soil	VLFFELFPAFITIVAATIAIALFIVARRRRADPERKLEQRDPNRPDVSTGPRFTRPSMRG
Ga0137382_103057252	3300012200	Vadose Zone Soil	MLFFELFPAFITVVAATIAIALFIVARRRRNQPERKLEMRDPNRTDGETGTRWTRPSMRG
Ga0137376_110049852	3300012208	Vadose Zone Soil	MLFLELFPAVITIVATTIAIALFIVARRRRGEPERELEQRDPNRPDVSTGPRFTRPSMRG
Ga0150985_1139277571	3300012212	Avena Fatua Rhizosphere	VLFFELFPIDITVVATSIAVALFIVARRRRGRPERKLEERDPARPDANTGARFTRPSMRG
Ga0137370_107948271	3300012285	Vadose Zone Soil	MLFLELFPAFVTVLATTIAIALFIVARRRRNQPERKLEMRDPNRTDGGTGTRWTRPSMRG
Ga0137375_110955221	3300012360	Vadose Zone Soil	LLFFELFPAFITIVATTIAIALFIVARRRRADPERKLEQRDPNRPDVSTGPRFTRPSMRG
Ga0157332_10827512	3300012511	Soil	FELFPVFITVVATTIAVALFVVARRRKGDPERKREMRDPNRQPSEPGARFTRPSMRG*
Ga0137410_118945081	3300012944	Vadose Zone Soil	LIFFELFPAFITVVATTIAVILFIVARKRRHDPERRREERDPNRMDAETGTRFTRPSMRG
Ga0164300_101490612	3300012951	Soil	VLFFELFPVFITVVATTIAVALFIIARRRKGDPEREREMRDPNRNRSEGARFTRPSMRG*
Ga0164303_112429021	3300012957	Soil	PTFITVVATTIAVALFIIARRRKGDPEREREMRDPNRNRSEGARFTRPSMRG*
Ga0164301_105490162	3300012960	Soil	LFPAFITVVATTIAVALFVIARRRKGDPEREREMRDPNRNRSEGARFTRPSMRG*
Ga0164304_106547532	3300012986	Soil	VLFFELFPAFITVVATTIAVALFIIARRRKGDPEREREMRDPNRNRSEGARFTRPSMRG*
Ga0164305_109845391	3300012989	Soil	VLFFELFPAFITVVATTIAVALFIIARRRKGDPEREREMRDPNRNPSEPGARFTRPSMRG
Ga0157374_127791902	3300013296	Miscanthus Rhizosphere	VLFFELFPAFITVVATTIAVALFIIARRRKGDPEREREMRDPNRNRSDGARFTRP
Ga0157378_109795742	3300013297	Miscanthus Rhizosphere	VLFFELFPVFITVVATTIAVALFVIARRRKGDPERKREMRDPNRNRSEGARFTRPSMRG*
Ga0075301_11064292	3300014262	Natural And Restored Wetlands	VLFFELFPAFITVVATTIAIVLFIVSRRRRGDPERKRELRDPTRNDAGRGARFTRPSMRS
Ga0157377_102996892	3300014745	Miscanthus Rhizosphere	VLFFELFPVFITIVATTIAVALLIVARRRKGQPERKREMRDPTQKSAAKGARLTRPSMRD
Ga0157376_119095802	3300014969	Miscanthus Rhizosphere	VLFFELFPAFITIVATRIAVVLFIVARRRKGQPERKREMRDPNRKSAAKGARFTRPSMRG
Ga0137409_105082903	3300015245	Vadose Zone Soil	LIFFELFPAFITVVATTIAVILFIVARKRRHDPERRREERDPNRKDAETGTRFTRPSMRG
Ga0132258_106928962	3300015371	Arabidopsis Rhizosphere	VLFFELFPIFITVVATSIAVALFIIARRRRGHPERKLEVRDPARPDAKTGARFTRPSMRG
Ga0132258_119700681	3300015371	Arabidopsis Rhizosphere	VLFFELFPAFITIVATTIAVALFIVARRRRHDPERPLETRDPNRTDAGKGTRFTRPSMRG
Ga0132258_137000912	3300015371	Arabidopsis Rhizosphere	VLFFELFPVFITIVATTIAVALFIVARRRKGQPERKREMPDPTQKSAAKGARLTRPSMRG
Ga0132256_1002325693	3300015372	Arabidopsis Rhizosphere	VLFFELFPAFITIVATTIAVVLFIVARRRKGEPERKREMRDPNRKSAAKGARFTRPSMRG
Ga0132257_1019829492	3300015373	Arabidopsis Rhizosphere	VLFFELFPAFITIVATTIAVALFIVARRRRHDPERPLETRDPNRTDAEKGTRYTRPSMRG
Ga0132257_1031802872	3300015373	Arabidopsis Rhizosphere	VLFFELFPVFITIVATTIAVALFIVARRRKGQPERKREMRDPTQNSAAKGARLTRPSMRG
Ga0187773_100591723	3300018064	Tropical Peatland	MLFFELFPIFITVVCTAIAIALFVVAHRRRGEPERQRERPDPSRVDAHAGQRITRGSMRG
Ga0184618_101419021	3300018071	Groundwater Sediment	VLFLELFPAFITIVATAIVVALFVVSRRRRGTPERPPEHRDSSRENGGTGRRYIRPSMRG
Ga0184628_100116803	3300018083	Groundwater Sediment	VLFFELFPVFITIVAGTIAIALFIVARRRRADPERKLEQRDPNRPDESTGLRFTRPSMRG
Ga0184628_102696703	3300018083	Groundwater Sediment	MLLFELFPAFITIVATAIAVSLFVVSRRRRGDPERRLEQRDPTRAAQDEGRRLTRPSMRE
Ga0066667_105027282	3300018433	Grasslands Soil	VLFFELVPAFITILAITIAIGLFIVARRRRADPERTLEQRDPNRPDVSTGQRFTRPSMRG
Ga0066669_106097112	3300018482	Grasslands Soil	VLFFELVPAFITIVAITIAIALFIVARRRRADPERTLEQRDPNRPDVSTGRRFTRPSMRG
Ga0173479_104901702	3300019362	Soil	VLFFELFPVFITIVATTIAVALFIIARRRKGQPERKREMRDPTRKSAAKGARFTRPSMRG
Ga0210378_101119541	3300021073	Groundwater Sediment	VLFFELFPAFITIVATAIAVALFVVSRRRRGDPERPLEQPDPLRPSKDDGRRIVRSSMRGGCSSV
Ga0210380_100781951	3300021082	Groundwater Sediment	VLFFELFPVFITIVAGTIAIALFIVARRRRADPERKLEQRDPNRPDESTGPRFTRPSMRG
Ga0182009_100075413	3300021445	Soil	MLFFELFPAVITIVATTIAIALFIVARRRRNDPERRREQRDPNQPDSEHGARFTRPSMRG
Ga0182009_101774773	3300021445	Soil	MLFFELFPAFITIVATTIAIALFIVARRRRHDPERSRELRDPNRREGEKGARFTRPSMRG
Ga0182009_103882442	3300021445	Soil	VLFFELFPVFITVVATTIAVALFVVARRRKGDPERKREMRDPNRNRSEQGPRFTRPSMRG
Ga0213880_100141632	3300021953	Exposed Rock	VLFFELFPIFITIVCTAIAIALFVVAIRRRGQPERPLEMRDPSRQDASAGAPITRSSMRG
Ga0207697_104593711	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	FFELFPAVITIVATTIAIALFIVARRRRNDPERRREQRDPNQPDRDQGARFTRPSMRG
Ga0207688_101122472	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFELFPAFITVVATAIAVALFIIARRRKGQPERPPEMRDPNNEGRAAQGTRFTRPSMR
Ga0207662_101002762	3300025918	Switchgrass Rhizosphere	VLFFELFPVFITIVATTIAVALFIVARRRKGQPERKREMRDPTQKSAAKGARLTRPSMRD
Ga0207649_106170082	3300025920	Corn Rhizosphere	MLFFELFPAVITIVATTIAIALFIVARRRRNDPERRREQRDPNQPDSEQGARFTRPSMRG
Ga0207681_103385731	3300025923	Switchgrass Rhizosphere	ALITIVATAIAVALFVVSRRRRGDPERPLEQPDPSRPAKPDGRPIVRSSMRG
Ga0207659_105040572	3300025926	Miscanthus Rhizosphere	MGVTVLLFELFPAFITIVATGIAVTLFVVSRRRRRGPERVLEQRDPARQSRDDGRRLTRPSMRG
Ga0207644_102586613	3300025931	Switchgrass Rhizosphere	VLFFELFPAFITVVATTIAVALFIIARRRKGDPEREREVRDPNRNRSEGARFTRPSMRG
Ga0207709_115157211	3300025935	Miscanthus Rhizosphere	GRPHCRTSMLFFELFPAFITIVATTIAVALFVVARRRRHDPERTLETRDPNRTDAGKGTRYTRPSMRG
Ga0207669_111755862	3300025937	Miscanthus Rhizosphere	MLFFELFPAFITIVATTIAVALFVVARRRRHDPERTLETRDPNQTDAGKGTRYTRPSMRG
Ga0207691_102085282	3300025940	Miscanthus Rhizosphere	MLFFELFPAVITIVATTIAIALFIVARRRRNDPERRREQRDPNQPDRDQGARFTRPSMRG
Ga0207691_102757372	3300025940	Miscanthus Rhizosphere	VLFFELFPAFITVIATAIAVVLFIIARRRKGQPERTREMRDPNGASAAQGTRFTR
Ga0207711_113730322	3300025941	Switchgrass Rhizosphere	MLFFELFPAVITIVATTIAIALFIVARRRRNDPERRREQRDPNQPDSDQGARFTRPSMRG
Ga0207651_103466841	3300025960	Switchgrass Rhizosphere	LFFELFPAFITVIATAIAVVLFIIARRRKGQPERTREMRDPNGGSAAQGTRFTRPSMRG
Ga0207640_116971512	3300025981	Corn Rhizosphere	VLFFELFPAFITIVATTIAVALFVVARRRRHDPERTLETRDPNRTDAGKGTRYTRPSMRG
Ga0207708_109695922	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFELFPAFITIVATAVAVALFIVARRRKGQPEREREIRDPNRADGARGTRFTRPSMRG
Ga0207648_105683022	3300026089	Miscanthus Rhizosphere	MLFFELFPAFITIVATTIAVALFVVARRRRHDPERTLETRDPNRTDAGKGTRYTRPSMRG
Ga0207674_108721122	3300026116	Corn Rhizosphere	VLFFELFPIFITIVATTIAVALFIVARRRKGQPERKREMRDPNQKSAAQGARFTRPSMRG
Ga0209726_100149486	3300027815	Groundwater	VLIFELFPALITIVATAIAVALFVVSRRRRGEPERPLEQQDPSRPSKDDGRRIVRSSMRG
Ga0209811_100128373	3300027821	Surface Soil	LLFFELFPAFITIVAATIAIALFIVARRRRADPERKLEQRDPNRPDESTGRRFTRPSMRG
Ga0209515_100191146	3300027835	Groundwater	VLFFELFPAFITIVATSIAVALFVVSRRRRGTPERPLERPNPSRPSQDKGRRIVRASMRG
Ga0268264_101649593	3300028381	Switchgrass Rhizosphere	VLFFELFPAFITVVATTIAVALFIIARRRKGDPEREREMRDPNRNRSEGARFTRPSMRG
Ga0268264_105522143	3300028381	Switchgrass Rhizosphere	MLFFELFPAFITIVATTIAVAFFVVARRRRHDPERTLETRDPNRTDAGKGTRYTRPSMRG
Ga0307281_100161962	3300028803	Soil	VLFFELFPLFITIVAATIAIALFIVARRRRADPERKLEQRDPNRPDESTGPQFTRPSMRG
Ga0307501_102489272	3300031152	Soil	LLFFELFPAFITIVATTIAIALFIVARRRRADPERKLEQRDPNRPDVSTGRRFTRPSMRG
Ga0307498_101686521	3300031170	Soil	LFPAFITVVATAIAVSLFVVSRRRRGDPERRLEQRDPTRATQDEGRRLTRPSMRE
Ga0307495_100950261	3300031199	Soil	FITVVATAIAVSLFVVSRRRRGDPERRLEQRDPTRATQDEGRRLTRPSMRE
Ga0307497_100357292	3300031226	Soil	VLFFELFPVFITIVAATIAIALFIVARRRRADPERKLEQRDPNRPDVSTGPRFTRPSMRG
Ga0307497_101704661	3300031226	Soil	GPQALTVPDMLLFELFPAFITVVATAIAVSLFVVSRRRRGDPERRLEQRDPTRATQDEGRRLTRPSMRE
Ga0307506_102594102	3300031366	Soil	MLLFELFPAFITVVATAIAVSLFVVSRRRRGDPERRLEQRDPTRATQDEGRRLTRPSMRE
Ga0307469_109517562	3300031720	Hardwood Forest Soil	VLFFELFPAFITIVATTIAVTLFVVARRRRHDPERTLETRDPNRTDAGKGTRYTRPSMRG
Ga0307469_111717043	3300031720	Hardwood Forest Soil	ITIVATTIAVTLFVVARRRRHDPERTLETRDPNRTDAGKGTRYTRPSMRG
Ga0307470_101575292	3300032174	Hardwood Forest Soil	VLFFELFPAFITIVATTIAVTLFIVARRRRHDPGRTLETRDPNRTDAEKGTRYTRPSMRG
Ga0310889_103660191	3300032179	Soil	PAFITVIATAIAVVLFIIARRRKGQPERTREMRDPNGGSAAQGTRFTRPSMRG
Ga0307472_1003614223	3300032205	Hardwood Forest Soil	FITVVATTIAVALFIIARRRKGDPEREREMRDPNRNRSEGARFTRPSMRG
Ga0307472_1003781874	3300032205	Hardwood Forest Soil	FELFPAFITIVATTIAVALFIVARRRRHDPERTRETRDPNRTDAGKGTRFTRPSMRG
Ga0335084_100061885	3300033004	Soil	VLFFELFPIFITVVCTAIAIALFVVARRRRGQPERPLEMRDPSRADGSAGARITRSSMRG
Ga0335084_101469763	3300033004	Soil	VLFFELFPIFITVVCTAIAIALFVVARRRRGQPERPLEMRDPSRADASAGARITRSSMRG
Ga0335077_112185442	3300033158	Soil	VLFFELFPIFVTVVCTAIAIALFTVARRRRGQPERPLERRDPTRPDAPSGVRIPRSSMRG
Ga0326726_101118825	3300033433	Peat Soil	VLFFELFPAFITIVATTIAIALFIVARRRRGDPERKLEQRDPNRPDVSTGPRFTRPSMRG
Ga0326726_102890553	3300033433	Peat Soil	MLFFELFPAFFTIVATTIAIALFIVARRRRADPERKLEQRDPNRPDVSTGPRFTRPSMRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064540

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences