NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F064450

Metagenome Family F064450

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F064450
Family Type Metagenome
Number of Sequences 128
Average Sequence Length 44 residues
Representative Sequence IEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGV
Number of Associated Samples 34
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 8.59 %
% of genes near scaffold ends (potentially truncated) 89.84 %
% of genes from short scaffolds (< 2000 bps) 92.19 %
Associated GOLD sequencing projects 33
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (57.031 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(78.125 % of family members)
Environment Ontology (ENVO) Unclassified
(78.125 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(85.156 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.12%    β-sheet: 0.00%    Coil/Unstructured: 55.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF07366SnoaL 2.34
PF00805Pentapeptide 1.56
PF00313CSD 1.56
PF07676PD40 1.56
PF14329DUF4386 1.56
PF07311Dodecin 1.56
PF00561Abhydrolase_1 0.78
PF08734GYD 0.78
PF12697Abhydrolase_6 0.78
PF13649Methyltransf_25 0.78
PF01022HTH_5 0.78
PF02517Rce1-like 0.78
PF14023DUF4239 0.78
PF00285Citrate_synt 0.78
PF02776TPP_enzyme_N 0.78
PF02142MGS 0.78
PF13401AAA_22 0.78
PF00111Fer2 0.78
PF04087DUF389 0.78
PF13586DDE_Tnp_1_2 0.78
PF13545HTH_Crp_2 0.78
PF07228SpoIIE 0.78
PF07217Het-C 0.78
PF00582Usp 0.78
PF03887YfbU 0.78
PF02426MIase 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 1.56
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 1.56
COG0372Citrate synthaseEnergy production and conversion [C] 0.78
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.78
COG1808Uncharacterized membrane protein AF0785, contains DUF389 domainFunction unknown [S] 0.78
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 0.78
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.78
COG4829Muconolactone delta-isomeraseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.78


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.03 %
All OrganismsrootAll Organisms42.97 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005562|Ga0058697_10471761Not Available635Open in IMG/M
3300006876|Ga0079217_10592455Not Available717Open in IMG/M
3300006894|Ga0079215_10283923All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300006918|Ga0079216_10354972Not Available897Open in IMG/M
3300006918|Ga0079216_10483691Not Available811Open in IMG/M
3300007004|Ga0079218_10615625Not Available995Open in IMG/M
3300007004|Ga0079218_11922066All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300007004|Ga0079218_13862122Not Available509Open in IMG/M
3300009789|Ga0126307_10145535Not Available1895Open in IMG/M
3300009789|Ga0126307_10205499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1580Open in IMG/M
3300009789|Ga0126307_10211669All Organisms → Viruses → Predicted Viral1556Open in IMG/M
3300009789|Ga0126307_10420392Not Available1078Open in IMG/M
3300009789|Ga0126307_10509656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium971Open in IMG/M
3300009789|Ga0126307_10541062Not Available940Open in IMG/M
3300009789|Ga0126307_10855556Not Available734Open in IMG/M
3300009789|Ga0126307_10871225Not Available727Open in IMG/M
3300009840|Ga0126313_10166452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1675Open in IMG/M
3300009840|Ga0126313_10396200Not Available1095Open in IMG/M
3300009840|Ga0126313_10478675Not Available995Open in IMG/M
3300009840|Ga0126313_10913184Not Available717Open in IMG/M
3300009840|Ga0126313_10963496All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium698Open in IMG/M
3300009840|Ga0126313_11187913Not Available628Open in IMG/M
3300009840|Ga0126313_11246281Not Available614Open in IMG/M
3300009840|Ga0126313_11854524Not Available505Open in IMG/M
3300010036|Ga0126305_10016725All Organisms → cellular organisms → Bacteria3788Open in IMG/M
3300010036|Ga0126305_10035992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2733Open in IMG/M
3300010036|Ga0126305_10126685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1566Open in IMG/M
3300010036|Ga0126305_10151620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1442Open in IMG/M
3300010036|Ga0126305_10225458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium1197Open in IMG/M
3300010036|Ga0126305_10356204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi959Open in IMG/M
3300010036|Ga0126305_10433400Not Available870Open in IMG/M
3300010036|Ga0126305_10525823Not Available791Open in IMG/M
3300010036|Ga0126305_10635486Not Available719Open in IMG/M
3300010036|Ga0126305_11187731Not Available527Open in IMG/M
3300010037|Ga0126304_10003623All Organisms → cellular organisms → Bacteria7803Open in IMG/M
3300010037|Ga0126304_10084905Not Available1981Open in IMG/M
3300010037|Ga0126304_10130632Not Available1611Open in IMG/M
3300010037|Ga0126304_10192452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1332Open in IMG/M
3300010037|Ga0126304_10364060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae963Open in IMG/M
3300010037|Ga0126304_10529725Not Available792Open in IMG/M
3300010037|Ga0126304_10598758All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300010037|Ga0126304_10851770Not Available619Open in IMG/M
3300010037|Ga0126304_10990849Not Available573Open in IMG/M
3300010037|Ga0126304_11023643Not Available563Open in IMG/M
3300010038|Ga0126315_10216820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1158Open in IMG/M
3300010038|Ga0126315_10233534Not Available1117Open in IMG/M
3300010038|Ga0126315_10325671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium953Open in IMG/M
3300010038|Ga0126315_10416200Not Available847Open in IMG/M
3300010038|Ga0126315_10945883Not Available575Open in IMG/M
3300010038|Ga0126315_11153682Not Available525Open in IMG/M
3300010039|Ga0126309_10049974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1995Open in IMG/M
3300010039|Ga0126309_10326161Not Available896Open in IMG/M
3300010039|Ga0126309_10385279All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300010039|Ga0126309_10969877Not Available568Open in IMG/M
3300010040|Ga0126308_10067002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2128Open in IMG/M
3300010040|Ga0126308_10086382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1898Open in IMG/M
3300010040|Ga0126308_10187074Not Available1325Open in IMG/M
3300010040|Ga0126308_10191128Not Available1312Open in IMG/M
3300010040|Ga0126308_10398858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae918Open in IMG/M
3300010040|Ga0126308_10607400Not Available746Open in IMG/M
3300010040|Ga0126308_11061117Not Available569Open in IMG/M
3300010040|Ga0126308_11101414Not Available559Open in IMG/M
3300010040|Ga0126308_11223988Not Available532Open in IMG/M
3300010040|Ga0126308_11310319Not Available514Open in IMG/M
3300010041|Ga0126312_10060275All Organisms → cellular organisms → Bacteria2549Open in IMG/M
3300010041|Ga0126312_10088745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae2103Open in IMG/M
3300010041|Ga0126312_10305924Not Available1122Open in IMG/M
3300010041|Ga0126312_10306345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1121Open in IMG/M
3300010041|Ga0126312_10454296Not Available914Open in IMG/M
3300010041|Ga0126312_10501743All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300010041|Ga0126312_10797810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria685Open in IMG/M
3300010041|Ga0126312_11011591Not Available608Open in IMG/M
3300010041|Ga0126312_11173564Not Available565Open in IMG/M
3300010041|Ga0126312_11332784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium531Open in IMG/M
3300010042|Ga0126314_10014682All Organisms → cellular organisms → Bacteria4584Open in IMG/M
3300010042|Ga0126314_10226016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1324Open in IMG/M
3300010042|Ga0126314_10382961Not Available1012Open in IMG/M
3300010042|Ga0126314_10483654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria897Open in IMG/M
3300010042|Ga0126314_10676608Not Available755Open in IMG/M
3300010042|Ga0126314_11005373Not Available619Open in IMG/M
3300010044|Ga0126310_10104627Not Available1723Open in IMG/M
3300010044|Ga0126310_10274271All Organisms → cellular organisms → Bacteria1149Open in IMG/M
3300010044|Ga0126310_10291294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1120Open in IMG/M
3300010044|Ga0126310_10341564Not Available1046Open in IMG/M
3300010044|Ga0126310_10603471Not Available819Open in IMG/M
3300010044|Ga0126310_10642733Not Available797Open in IMG/M
3300010044|Ga0126310_10875885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium697Open in IMG/M
3300010044|Ga0126310_11014250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium654Open in IMG/M
3300010044|Ga0126310_11805857Not Available510Open in IMG/M
3300010045|Ga0126311_10003423All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti8172Open in IMG/M
3300010045|Ga0126311_10270185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1269Open in IMG/M
3300010045|Ga0126311_10442484Not Available1007Open in IMG/M
3300010045|Ga0126311_10468056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium981Open in IMG/M
3300010045|Ga0126311_10814592Not Available753Open in IMG/M
3300010045|Ga0126311_10846212Not Available740Open in IMG/M
3300010045|Ga0126311_10988504All Organisms → cellular organisms → Bacteria → Terrabacteria group687Open in IMG/M
3300010045|Ga0126311_10989699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium687Open in IMG/M
3300010045|Ga0126311_11285397Not Available608Open in IMG/M
3300010045|Ga0126311_11591950Not Available549Open in IMG/M
3300010045|Ga0126311_11763717Not Available524Open in IMG/M
3300010166|Ga0126306_10129296All Organisms → cellular organisms → Bacteria1857Open in IMG/M
3300010166|Ga0126306_10197592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1517Open in IMG/M
3300010166|Ga0126306_10237054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae1388Open in IMG/M
3300010166|Ga0126306_10290236Not Available1258Open in IMG/M
3300010166|Ga0126306_10297449Not Available1242Open in IMG/M
3300010166|Ga0126306_10346396Not Available1153Open in IMG/M
3300010166|Ga0126306_10987098Not Available686Open in IMG/M
3300010166|Ga0126306_11717619Not Available524Open in IMG/M
3300012093|Ga0136632_10272614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae764Open in IMG/M
3300018432|Ga0190275_11656229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium718Open in IMG/M
3300018432|Ga0190275_13300558Not Available522Open in IMG/M
3300018465|Ga0190269_10139853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1239Open in IMG/M
3300018469|Ga0190270_12921670Not Available540Open in IMG/M
3300018920|Ga0190273_10228376All Organisms → cellular organisms → Bacteria → Terrabacteria group1189Open in IMG/M
3300018920|Ga0190273_10865506Not Available727Open in IMG/M
3300019377|Ga0190264_10254106Not Available1023Open in IMG/M
3300019377|Ga0190264_11411901Not Available597Open in IMG/M
3300028721|Ga0307315_10226391All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300030513|Ga0268242_1084507Not Available641Open in IMG/M
3300031548|Ga0307408_102032462Not Available553Open in IMG/M
3300031731|Ga0307405_11228663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium649Open in IMG/M
3300031824|Ga0307413_11246188Not Available649Open in IMG/M
3300031852|Ga0307410_10087011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2209Open in IMG/M
3300031901|Ga0307406_11346657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium624Open in IMG/M
3300031995|Ga0307409_101885315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium627Open in IMG/M
3300032159|Ga0268251_10016192All Organisms → cellular organisms → Bacteria → Terrabacteria group2154Open in IMG/M
3300034174|Ga0334932_073769Not Available591Open in IMG/M
3300034221|Ga0334937_031467Not Available1418Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil78.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.03%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil5.47%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere4.69%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave1.56%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.78%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil0.78%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300030513Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M
3300034174Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNSEnvironmentalOpen in IMG/M
3300034221Biocrust microbial communities from Mojave Desert, California, United States - 33SMCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058697_1047176123300005562AgaveKKTGLDWPELKVADIEKAMSSVTLFYWCTKKEVGKLGHQKQLELTDEEAESIGV*
Ga0079217_1059245513300006876Agricultural SoilQTGMDWPELQVGEIEKAMSSVTLFYWGTKEEVGKRWHEKQLELTDEEAQHIGV*
Ga0079215_1028392313300006894Agricultural SoilVGEIEKAMSSVTLFYWCTKEDVGKRWLQKQLDLSDEEAESIGV*
Ga0079216_1035497213300006918Agricultural SoilSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGV*
Ga0079216_1048369113300006918Agricultural SoilKKTGVDWPTLMVGDIEKAMSSVTLFYWCTKEDVGKRGHQKQLELTDEEADSIGV*
Ga0079218_1061562523300007004Agricultural SoilVGDIEKAMSSVTLFYWCTKEDVGKRGHQKQLELTDEEADSIGVDR*
Ga0079218_1192206613300007004Agricultural SoilKKTGLDWPELQVGEIEKAMSSVTLFYWCTKKEVGKLGHEKQLELTDEEADSIGI*
Ga0079218_1386212213300007004Agricultural SoilEKAMSSVTLFYWCTKKEVGKLGHQKQLELTDEEAESIGV*
Ga0126307_1014553513300009789Serpentine SoilMDWPELKVGDIQKAMSSVTLFYWCTKEDVGKRGRQKQLELTDEEAESVAIK*
Ga0126307_1020549913300009789Serpentine SoilDWPTLRVGNIEKTMSSATVFYWCTEEDVGKRGHQKQIELTDEEARLLA*
Ga0126307_1021166913300009789Serpentine SoilMDWPELQVANIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESI
Ga0126307_1042039213300009789Serpentine SoilTLQVGDIEKAMSSVTLFYWCTKKEVGKRGHQMQLELTDEEADSIGV*
Ga0126307_1050965613300009789Serpentine SoilDWPELKVGDIQKAMSSVTLFYWCTKEDVGKRGHEKQLELTDEEAESVAIN*
Ga0126307_1054106213300009789Serpentine SoilEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAKSIGV*
Ga0126307_1085555613300009789Serpentine SoilAMSSVTLFYWCTKEDVGKRWLQKQLELTDEEAKSIGA*
Ga0126307_1087122513300009789Serpentine SoilELQVGNIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAKSIGV*
Ga0126313_1016645213300009840Serpentine SoilIQKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGI*
Ga0126313_1039620013300009840Serpentine SoilMDWPELQVGNIEKAMSSVTLFYWCTKKEVGKRWHQKQLELTDEEADSIGV*
Ga0126313_1047867513300009840Serpentine SoilIQKSMSSVTLFYWDTKEEVGKRWHQKQLELTDEEAESIGT*
Ga0126313_1091318413300009840Serpentine SoilHGGDIEKAMSSVTLFYWCTKEHVGKRGHQKQLELTDEEAESIGV*
Ga0126313_1096349613300009840Serpentine SoilIEKSMTSTTVLYWCTEKDVGKRGHEKQLELTDEEAESIGA*
Ga0126313_1118791313300009840Serpentine SoilTGMDWPELKVGDIEKAMSSVTLFYWCTKKEVGKRWHQKQLELTDEEAESIGV*
Ga0126313_1124628113300009840Serpentine SoilSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGV*
Ga0126313_1185452413300009840Serpentine SoilAGVEKSMSSVTLFYWCTKEDVGKRGHEQQLELTDQEAESIEIRHFPDVT*
Ga0126305_1001672513300010036Serpentine SoilKAMSSATLFYWCTKEEVGKRGHQKQLELTYEEAESLLA*
Ga0126305_1003599253300010036Serpentine SoilMDWPELQVGDIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAKSIGV*
Ga0126305_1012668523300010036Serpentine SoilMDWPELKVGDIQKAMSSVTLFYWCTKEDVGKRGRQKQLQLSDEEAESIAIK*
Ga0126305_1015162013300010036Serpentine SoilMDWPELQVANIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGV*
Ga0126305_1022545823300010036Serpentine SoilAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGV*
Ga0126305_1035620413300010036Serpentine SoilLKVGDIEKAMSSVTLFYWCTKKEVGKRGHQKQLELTDEEAESIGV*
Ga0126305_1043340023300010036Serpentine SoilMDWPTLKVGDVEKSMSSATLFYWGTKEEVGKLGHQMQLELTDEEAESIGV*
Ga0126305_1052582323300010036Serpentine SoilVGEIEKGMSSVTLFYWGTKEEVGKRWHEKQLELTDEEAQYIDV*
Ga0126305_1063548613300010036Serpentine SoilMTSTTVLYWCTEKDVGKRGHEKQLELTDEEAESIGA*
Ga0126305_1118773113300010036Serpentine SoilLKVGDIEKAMSSVTLFYWCTKEDVGKRWLQKQLDLTDEEAESIGV*
Ga0126304_1000362313300010037Serpentine SoilMSTVTLFYWCTETEVGKRWHQKQLELTEEEAESIGL*
Ga0126304_1008490513300010037Serpentine SoilAEIQKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGI*
Ga0126304_1013063213300010037Serpentine SoilMDWPELQVANIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAE
Ga0126304_1019245233300010037Serpentine SoilMDWPELKVANIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAKSIGV*
Ga0126304_1036406023300010037Serpentine SoilMDWPELQVIDVEKAMSSATVFYWCTKEDVGKRGHQMQLQLTDEETESIAIN*
Ga0126304_1052972513300010037Serpentine SoilMSSVTLFYWCTKEEVGKRGYQKQLELTDEEAESIGV*
Ga0126304_1059875823300010037Serpentine SoilMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGV*
Ga0126304_1085177023300010037Serpentine SoilDIEKTMSSVTLFYWCTKEDVGKRWLQKQLELSDEEADSIGI*
Ga0126304_1099084923300010037Serpentine SoilQVANIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGV*
Ga0126304_1102364313300010037Serpentine SoilEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGV*
Ga0126315_1021682013300010038Serpentine SoilKVGDIEKAMSSVTLFYWCTKEDVGKRWLQKQLELTDEEAESIGV*
Ga0126315_1023353423300010038Serpentine SoilVVDIEKAMSSVTLFYWCKKEDVGKRWLQKQVELTDEEAESIAIN*
Ga0126315_1032567113300010038Serpentine SoilMDWPELQVGEIEKAMSSVTLFYWCTKEEVGKRWHQKQLELTDEEADS
Ga0126315_1041620013300010038Serpentine SoilQVGEIEKAMSSVTLFYWCTKEEVGKRWHQKQLELTEEEAEYIGV*
Ga0126315_1094588313300010038Serpentine SoilKKTGLDWPELQVGDIEKAMSSVTLFYWCTKEHVGKRGHQKQLELTDEEAESIGV*
Ga0126315_1115368223300010038Serpentine SoilIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAKSIGV*
Ga0126309_1004997433300010039Serpentine SoilWPELKVGDIEKAMSSVTLFYWCTKEDVGKRGRQKQLELTDEEAESIAIK*
Ga0126309_1032616133300010039Serpentine SoilGVDWPTLKVGDIEKAMSSVTLFYWCTKEDVGKRGHEKSLELTDEEADSVGV*
Ga0126309_1038527923300010039Serpentine SoilDIQKAMSSVTLFYWCTKEDVGKRGHQKQLELTDEETNSIAIN*
Ga0126309_1096987723300010039Serpentine SoilGNIEKAMSSATVFYWCTEEDVGKRGYQKQLELTDEEARLLA*
Ga0126308_1006700213300010040Serpentine SoilIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGV*
Ga0126308_1008638243300010040Serpentine SoilSVTLYYWGKKEEVGKRWHQKQLELTDEEAESIGI*
Ga0126308_1018707433300010040Serpentine SoilGLDWPELEVGDIEKAMSSVTLFYWCTKEDVGKRWLQKQLELSDEEAESIGV*
Ga0126308_1019112823300010040Serpentine SoilMDWPELQVGNIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGV*
Ga0126308_1039885813300010040Serpentine SoilKTGVDWPTLQVGDIEKAMSSATLFYWCTKEDVGKRWLQKQLELTDEEADSIGI*
Ga0126308_1060740023300010040Serpentine SoilDIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAKSIGV*
Ga0126308_1106111723300010040Serpentine SoilDWPELQVGDIEKAMSSVTLFYWCTKEDVGKRGHQKQLELTDEEAESIGV*
Ga0126308_1110141413300010040Serpentine SoilIEKAMSSVTLYYWGKKEEVGKRWHEKQLELTDEEADYIGI*
Ga0126308_1122398823300010040Serpentine SoilEKAMSSVTLFYWCTKEDVGKRWLQKQLELTDEEAESIAID*
Ga0126308_1131031913300010040Serpentine SoilDWPTLQVGDIEKAMSSVTLFYWCTKEDVGKRWLQKQLELTDEEADSIGI*
Ga0126312_1006027533300010041Serpentine SoilSSVTLFYWCTKEDVGKRGHQKRLELTDEEAESIGA*
Ga0126312_1008874543300010041Serpentine SoilGDIERAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGV*
Ga0126312_1030592423300010041Serpentine SoilEKAMSSVTLFYWGTKKEVGKLGHQKQLELTDEEAESIGV*
Ga0126312_1030634513300010041Serpentine SoilMSSVTLFYWCTKEDVGKRGHQKQLQLSDEEAESIGA*
Ga0126312_1045429633300010041Serpentine SoilSVTLFYWGTKEEVGKRWHEKQLELTDEEAEYIGV*
Ga0126312_1050174323300010041Serpentine SoilPELQVGDIQKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAASIGV*
Ga0126312_1079781013300010041Serpentine SoilAEIEKAMSSVTLFYWCTKEDVGKRWLEKQLELTDEEAEYIGV*
Ga0126312_1101159123300010041Serpentine SoilADIEKAMSSVTLFYWCTKEDVGKRWLQKQLELTDEEAESIGV*
Ga0126312_1117356423300010041Serpentine SoilLQIGEIEKAMSSVTLFYWGTKEDVGKRGYQKQLELTDEEAECIGV*
Ga0126312_1133278423300010041Serpentine SoilQKAMSSVTLFYWCTKEDVGKRGHKKQLELTDEEAEAISIN*
Ga0126314_1001468213300010042Serpentine SoilDIEKAMSSVTLFYWCTKEDVGKRWLQKQLDLTDEEADSIGV*
Ga0126314_1022601633300010042Serpentine SoilGMDWPELKVGDIQKSMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGI*
Ga0126314_1038296133300010042Serpentine SoilDIEKAMSSVTLFYWCKKEDVGKRWLQKQVELTDEEAESIAIN*
Ga0126314_1048365413300010042Serpentine SoilTLQVIDIEKAMSSATLFYWCTKEDVGKRGHQKQLELTDEEAESLLT*
Ga0126314_1067660813300010042Serpentine SoilLDWPELEVGDIEKAMSSVTLFYWCTKEHVGKRGHQKQLELTDEEAESIGV*
Ga0126314_1100537323300010042Serpentine SoilDIEKAMSSVTLFYWCKKEDVGKRWLEKQLDLTDEEAESIGV*
Ga0126310_1010462743300010044Serpentine SoilDIEKAMSSVTLFYWCTQEDVGKRWLRKQLDLSDEEAESIGV*
Ga0126310_1027427123300010044Serpentine SoilGMDWPELTVGEIQKAMSSVTLFYWCTEEDVGKRWHQKQLELTDEEAEYIGV*
Ga0126310_1029129433300010044Serpentine SoilMNWSELTVVDVQKSMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAEYIGV*
Ga0126310_1034156423300010044Serpentine SoilKAMSSVTLFYWCKKEDVGKRWLQKQVELTDEEAESIAIN*
Ga0126310_1060347113300010044Serpentine SoilSDIQKSMSSVTLFYWDTKEEVGKRWHQKQLELTDEEAESIGI*
Ga0126310_1064273323300010044Serpentine SoilMSSATVFYWCTKEDVGKRGHEKQLELTDEEAESIAIK*
Ga0126310_1087588523300010044Serpentine SoilMDWPELQVVDVQKSMSSVTLFYWGTKEEVGKRWHQKQLELTDE
Ga0126310_1101425023300010044Serpentine SoilTLKVVGIEKAMSSATVFYWCTKEDVGERGHQQQLQLTDEEAESIAIG*
Ga0126310_1180585713300010044Serpentine SoilVTLFYWCTKEDVGKRGRQKQLELTDEEAESIAIN*
Ga0126311_1000342353300010045Serpentine SoilAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGV*
Ga0126311_1027018523300010045Serpentine SoilMDWPTLKVGDIEKAMSSVTLFYWCTKEDVGKRWLQKQLELTDEEAESIAID*
Ga0126311_1044248423300010045Serpentine SoilKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGV*
Ga0126311_1046805633300010045Serpentine SoilDWPELQVADIEKAMSSVTLFYWCTKEDVGKRGRQKQLQLTDEEAESIAIK*
Ga0126311_1081459213300010045Serpentine SoilNIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGV*
Ga0126311_1084621223300010045Serpentine SoilWPTLKVGDIEKAMSSVTLFYWCTKEDVGKLGHQKQLELTDEEAESIGV*
Ga0126311_1098850413300010045Serpentine SoilVADIEKAMSSVTLFYWCKKEDVGKRWLQKQLELTDEEAESLFA*
Ga0126311_1098969913300010045Serpentine SoilMSSVTLFYWCTKEDVGKRWLQKQLELTDEEAESIAIN*
Ga0126311_1128539713300010045Serpentine SoilKAMSSVTLFYWCKKEDVGKRWLQKQVELTDEEAESIIGV*
Ga0126311_1159195023300010045Serpentine SoilLRVVDIEKAMSSVTLFYWCTKEEVGKRWHKKQLELTDQEADSIGI*
Ga0126311_1176371713300010045Serpentine SoilDIEKAMSSATLFYWCTKEDVGKRWLQKQLELTDEEADSIGI*
Ga0126306_1012929633300010166Serpentine SoilMSSVTLFYWCTKEDVGKRWLQKQLELSDEEADSIGV*
Ga0126306_1019759243300010166Serpentine SoilSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGV*
Ga0126306_1023705423300010166Serpentine SoilLQVGDIEKAMSSATLFYWCTKEDVGKRWLQKQLELTDEEADSIGI*
Ga0126306_1029023623300010166Serpentine SoilWPTLKVADIKKAMSSVTLFYWCTKEDVGKRGRQKQLELTDEEAESIGV*
Ga0126306_1029744923300010166Serpentine SoilWPELQVGDIQKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGI*
Ga0126306_1034639623300010166Serpentine SoilLQVADIEKAMSSVTLFYWCTKEDVGKRWLQKQLDLTDEEADSIGV*
Ga0126306_1098709813300010166Serpentine SoilLDWPELQVGEIEKAMSSVTLYYWGKKEEVGKRWHQKQLELTDEEADYIGI*
Ga0126306_1171761923300010166Serpentine SoilSVTLFYWGTKEEVGKRWHQKQLELTDEEAESIGI*
Ga0136632_1027261413300012093Polar Desert SandMDWPTLLVDDIEKAMSSVTLFYWCTKEDVGKRWRQKQLELTDEEAESIAIN*
Ga0190275_1165622923300018432SoilELQVGEIEKAMSSVTLFYWCTKEDVGKRGHQKQLDLTDEEAKSIGV
Ga0190275_1330055813300018432SoilLDWPELQVGEIEKGMNSVTLFYWGTKEEVGKRWHEKQLELTDEEAESIGL
Ga0190269_1013985313300018465SoilKAMSSVTLFYWCTNEDVGKRWLEKQLDLTDEEADSIGV
Ga0190270_1292167013300018469SoilKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEAEYIGV
Ga0190273_1022837633300018920SoilVGGIEKAMTSTTVLYWCTEKDVGKRGHEKQLELTDEEAESIGA
Ga0190273_1086550623300018920SoilKVGGIEKAMTSTTVFYWCTEKEVGRSGHEKQLELTDEEADSIGA
Ga0190264_1025410613300019377SoilAEIQKSMSSVTLFYWGTKEEVGTRWHEKQLELTDEEADSIGV
Ga0190264_1141190113300019377SoilKTGMDWPTLRVGDIQKSMSSATVSYWCTEEDVGKRGHEKQLELTDEEADSIGV
Ga0307315_1022639123300028721SoilKSMSSATVSYWCTEEDVGKRGHQKQLELTDEEAETIGA
Ga0268242_108450723300030513SoilQVAGIEKAMSSATLFYWCTKKDVGKLGHQKQLELTDEEAESIGV
Ga0307408_10203246213300031548RhizosphereNIEKAMSSATLFYWGTKEEVGKRWHQKQLELTDEEAESIGV
Ga0307405_1122866313300031731RhizosphereWPELKVGEIEKAMSSVTLFYWCTKEDVGKRGHQKQLDLTDEEAKSIGV
Ga0307413_1124618813300031824RhizosphereGLDWPELQVGEIEKAMSSVTLFYWGTKEEVGKRWHQKQLELTDEEADSIGV
Ga0307410_1008701113300031852RhizosphereVDWPTLKVGDIEKAMSSVTLFYWCTKEDVGKRGHQKQLELTYEEAESIGV
Ga0307406_1134665723300031901RhizosphereSDIEKAMSSVTLFYWCTKEDVGKRGRQKQLELTDEEAESIAIN
Ga0307409_10188531523300031995RhizosphereKVGDIEKAMSSVTLFYWCTKEDVGKRGHQKQLELTYEEAESIGVL
Ga0268251_1001619233300032159AgaveSSATLFYWCKKEEVGKRWLQQQLELTDEEAESLLA
Ga0334932_073769_185_3373300034174Sub-Biocrust SoilMDWPELQVAEIQKAMSSVTLYYWGTKEEVGKRWHQKQLELTDEEAESIGA
Ga0334937_031467_10_1593300034221BiocrustMDWPTLRVGNIEKAMSSATVFYWCTEEDVGKRGHQKQLELTDEEARLLA


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