Metagenome / Metatranscriptome Family F064182

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064182
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	65 residues
Representative Sequence	MKPVILKDGAGNPQGVIREIAGGQERLYDRAGNAIATYRRNVNFTYDNNGVRFGSGNRLAGLVEHKE
Number of Associated Samples	81
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.82 %
% of genes near scaffold ends (potentially truncated)	18.60 %
% of genes from short scaffolds (< 2000 bps)	70.54 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.140 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (20.155 % of family members)
Environment Ontology (ENVO)	Unclassified (27.907 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.163 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.37% β-sheet: 33.68% Coil/Unstructured: 58.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
d.23.1.1: Tubby C-terminal domain-like	d1c8za_	1c8z	0.76
d.23.1.1: Tubby C-terminal domain-like	d1c8za_	1c8z	0.76
d.23.1.2: Tubby C-terminal domain-like	d2q4ma_	2q4m	0.72
d.23.1.2: Tubby C-terminal domain-like	d2q4ma_	2q4m	0.72
b.76.1.1: Outer surface protein	d2i5vo_	2i5v	0.61
f.4.1.3: OMPA-like	d3hola2	3hol	0.61
b.76.1.1: Outer surface protein	d2i5vo_	2i5v	0.61
f.4.1.3: OMPA-like	d3hola2	3hol	0.61
d.19.1.1: MHC antigen-recognition domain	d1lqva_	1lqv	0.59
d.19.1.1: MHC antigen-recognition domain	d1lqva_	1lqv	0.59

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00239	Resolvase	14.73
PF14659	Phage_int_SAM_3	7.75
PF00782	DSPc	3.88
PF13280	WYL	1.55
PF13495	Phage_int_SAM_4	1.55
PF01039	Carboxyl_trans	0.78
PF14310	Fn3-like	0.78
PF02899	Phage_int_SAM_1	0.78
PF11074	DUF2779	0.78
PF09339	HTH_IclR	0.78
PF07719	TPR_2	0.78
PF07676	PD40	0.78
PF01965	DJ-1_PfpI	0.78
PF00158	Sigma54_activat	0.78
PF13304	AAA_21	0.78
PF00004	AAA	0.78
PF00754	F5_F8_type_C	0.78
PF01850	PIN	0.78
PF13784	Fic_N	0.78
PF01227	GTP_cyclohydroI	0.78
PF00271	Helicase_C	0.78
PF14559	TPR_19	0.78
PF00221	Lyase_aromatic	0.78
PF11741	AMIN	0.78
PF09721	Exosortase_EpsH	0.78
PF05598	DUF772	0.78
PF12680	SnoaL_2	0.78
PF09903	DUF2130	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	14.73
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	14.73
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.78
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.78
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	0.78
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.78
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.78
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.69 %
Unclassified	root	N/A	40.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.69 %
Unclassified	root	N/A	40.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.14 %
Unclassified	root	N/A	40.31 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.09 %
Unclassified	root	N/A	40.31 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	1.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.53 %
Candidatus Lokiarchaeota	phylum	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	1.55 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.53 %
unclassified Lokiarchaeota	no rank	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota	1.55 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.53 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1.55 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	5.43 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1.55 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.78 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	5.43 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1.55 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.78 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10011521	All Organisms → cellular organisms → Bacteria → Acidobacteria	5839	Open in IMG/M
3300001100\|JGI12703J13194_107735	Not Available	544	Open in IMG/M
3300001180\|JGI12695J13573_1000179	All Organisms → cellular organisms → Bacteria	8638	Open in IMG/M
3300001593\|JGI12635J15846_10018354	All Organisms → cellular organisms → Bacteria	5789	Open in IMG/M
3300001593\|JGI12635J15846_10500345	Not Available	717	Open in IMG/M
3300004080\|Ga0062385_10784979	Not Available	622	Open in IMG/M
3300004091\|Ga0062387_100122634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1445	Open in IMG/M
3300004091\|Ga0062387_101401856	Not Available	556	Open in IMG/M
3300004092\|Ga0062389_102226885	Not Available	721	Open in IMG/M
3300005177\|Ga0066690_10199899	All Organisms → cellular organisms → Bacteria → Acidobacteria	1330	Open in IMG/M
3300005436\|Ga0070713_100764614	Not Available	925	Open in IMG/M
3300005439\|Ga0070711_101498589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	588	Open in IMG/M
3300005542\|Ga0070732_10000280	All Organisms → cellular organisms → Bacteria	36099	Open in IMG/M
3300005542\|Ga0070732_10785161	Not Available	581	Open in IMG/M
3300006052\|Ga0075029_100116857	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300006052\|Ga0075029_100681208	Not Available	692	Open in IMG/M
3300006102\|Ga0075015_100562957	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300009521\|Ga0116222_1257323	Not Available	753	Open in IMG/M
3300009523\|Ga0116221_1086805	All Organisms → cellular organisms → Bacteria → Acidobacteria	1395	Open in IMG/M
3300009523\|Ga0116221_1296321	Not Available	700	Open in IMG/M
3300009523\|Ga0116221_1467984	Not Available	551	Open in IMG/M
3300009524\|Ga0116225_1047862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2067	Open in IMG/M
3300009645\|Ga0116106_1020345	All Organisms → cellular organisms → Bacteria → Acidobacteria	2333	Open in IMG/M
3300009672\|Ga0116215_1165480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300009683\|Ga0116224_10248366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300009698\|Ga0116216_10159947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1384	Open in IMG/M
3300009824\|Ga0116219_10233507	Not Available	1047	Open in IMG/M
3300009824\|Ga0116219_10237157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300009824\|Ga0116219_10749931	Not Available	533	Open in IMG/M
3300009839\|Ga0116223_10425668	Not Available	779	Open in IMG/M
3300010339\|Ga0074046_10504071	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300010339\|Ga0074046_10869857	Not Available	526	Open in IMG/M
3300010341\|Ga0074045_11069486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	504	Open in IMG/M
3300010343\|Ga0074044_10002634	All Organisms → cellular organisms → Bacteria	15624	Open in IMG/M
3300010343\|Ga0074044_10269535	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300010343\|Ga0074044_10389745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	913	Open in IMG/M
3300010379\|Ga0136449_100127239	All Organisms → cellular organisms → Bacteria	5090	Open in IMG/M
3300010379\|Ga0136449_100225072	All Organisms → cellular organisms → Bacteria	3523	Open in IMG/M
3300010379\|Ga0136449_100248320	All Organisms → cellular organisms → Bacteria	3309	Open in IMG/M
3300010379\|Ga0136449_100582856	All Organisms → cellular organisms → Bacteria → Acidobacteria	1913	Open in IMG/M
3300010379\|Ga0136449_101549474	Not Available	1010	Open in IMG/M
3300010379\|Ga0136449_101948658	Not Available	870	Open in IMG/M
3300014158\|Ga0181521_10003850	All Organisms → cellular organisms → Bacteria	17487	Open in IMG/M
3300014159\|Ga0181530_10047219	Not Available	2854	Open in IMG/M
3300014164\|Ga0181532_10017094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5376	Open in IMG/M
3300014501\|Ga0182024_10047494	Not Available	6883	Open in IMG/M
3300014501\|Ga0182024_10049160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6726	Open in IMG/M
3300016730\|Ga0181515_1353424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	691	Open in IMG/M
3300017822\|Ga0187802_10201841	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300017823\|Ga0187818_10029357	All Organisms → cellular organisms → Bacteria → Acidobacteria	2358	Open in IMG/M
3300017823\|Ga0187818_10113819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1171	Open in IMG/M
3300017823\|Ga0187818_10236880	Not Available	797	Open in IMG/M
3300017823\|Ga0187818_10266429	Not Available	750	Open in IMG/M
3300017823\|Ga0187818_10444906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	578	Open in IMG/M
3300017823\|Ga0187818_10544432	Not Available	523	Open in IMG/M
3300017930\|Ga0187825_10183074	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300017933\|Ga0187801_10078488	Not Available	1231	Open in IMG/M
3300017933\|Ga0187801_10182526	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	827	Open in IMG/M
3300017933\|Ga0187801_10230522	Not Available	740	Open in IMG/M
3300017938\|Ga0187854_10257128	Not Available	756	Open in IMG/M
3300017940\|Ga0187853_10181162	Not Available	994	Open in IMG/M
3300017943\|Ga0187819_10449495	Not Available	738	Open in IMG/M
3300017943\|Ga0187819_10730746	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300017943\|Ga0187819_10741142	Not Available	553	Open in IMG/M
3300017955\|Ga0187817_10145615	All Organisms → cellular organisms → Bacteria → Acidobacteria	1505	Open in IMG/M
3300017955\|Ga0187817_10723405	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300017959\|Ga0187779_10139152	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300017972\|Ga0187781_10577546	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300017975\|Ga0187782_10044085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	3248	Open in IMG/M
3300018006\|Ga0187804_10113634	Not Available	1120	Open in IMG/M
3300018006\|Ga0187804_10147277	Not Available	990	Open in IMG/M
3300018006\|Ga0187804_10253943	Not Available	759	Open in IMG/M
3300018012\|Ga0187810_10049688	Not Available	1579	Open in IMG/M
3300018012\|Ga0187810_10170254	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300018012\|Ga0187810_10335731	Not Available	629	Open in IMG/M
3300018044\|Ga0187890_10000125	All Organisms → cellular organisms → Bacteria	52391	Open in IMG/M
3300018062\|Ga0187784_10199135	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300018062\|Ga0187784_10634828	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300018062\|Ga0187784_10782864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	761	Open in IMG/M
3300018085\|Ga0187772_10797903	Not Available	681	Open in IMG/M
3300018088\|Ga0187771_10013972	All Organisms → cellular organisms → Bacteria	5876	Open in IMG/M
3300018088\|Ga0187771_10657080	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300019786\|Ga0182025_1102248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2313	Open in IMG/M
3300020579\|Ga0210407_10173671	All Organisms → cellular organisms → Bacteria → Acidobacteria	1668	Open in IMG/M
3300020581\|Ga0210399_10000033	All Organisms → cellular organisms → Bacteria	95239	Open in IMG/M
3300021168\|Ga0210406_10955931	Not Available	641	Open in IMG/M
3300021170\|Ga0210400_10984712	Not Available	686	Open in IMG/M
3300021403\|Ga0210397_11523112	Not Available	519	Open in IMG/M
3300022731\|Ga0224563_1010906	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300027394\|Ga0209904_1012880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	624	Open in IMG/M
3300027439\|Ga0209332_1001475	All Organisms → cellular organisms → Bacteria	5128	Open in IMG/M
3300027570\|Ga0208043_1065629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300027783\|Ga0209448_10023719	Not Available	2032	Open in IMG/M
3300027842\|Ga0209580_10000463	All Organisms → cellular organisms → Bacteria	22344	Open in IMG/M
3300027842\|Ga0209580_10272173	Not Available	843	Open in IMG/M
3300027854\|Ga0209517_10060578	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300027854\|Ga0209517_10067213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2569	Open in IMG/M
3300027898\|Ga0209067_10888032	Not Available	523	Open in IMG/M
3300030659\|Ga0316363_10020950	All Organisms → cellular organisms → Bacteria → Acidobacteria	3539	Open in IMG/M
3300030706\|Ga0310039_10291775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300031718\|Ga0307474_11373691	Not Available	557	Open in IMG/M
3300031754\|Ga0307475_10962127	Not Available	672	Open in IMG/M
3300031962\|Ga0307479_10002880	All Organisms → cellular organisms → Bacteria → Acidobacteria	15640	Open in IMG/M
3300031962\|Ga0307479_10507168	Not Available	1190	Open in IMG/M
3300031962\|Ga0307479_11450946	Not Available	644	Open in IMG/M
3300032160\|Ga0311301_10093664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5967	Open in IMG/M
3300032160\|Ga0311301_11028673	Not Available	1084	Open in IMG/M
3300032180\|Ga0307471_100577727	Not Available	1281	Open in IMG/M
3300032205\|Ga0307472_101891665	Not Available	595	Open in IMG/M
3300032770\|Ga0335085_10000798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	79399	Open in IMG/M
3300032770\|Ga0335085_10018811	All Organisms → cellular organisms → Bacteria → Acidobacteria	9910	Open in IMG/M
3300032782\|Ga0335082_10115242	Not Available	2644	Open in IMG/M
3300032782\|Ga0335082_11476941	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300032782\|Ga0335082_11504857	Not Available	544	Open in IMG/M
3300032783\|Ga0335079_10166289	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300032783\|Ga0335079_10359080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1579	Open in IMG/M
3300032783\|Ga0335079_12015756	Not Available	555	Open in IMG/M
3300032805\|Ga0335078_10020372	All Organisms → cellular organisms → Bacteria → Acidobacteria	9856	Open in IMG/M
3300032805\|Ga0335078_11095499	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300032805\|Ga0335078_11455075	Not Available	769	Open in IMG/M
3300032892\|Ga0335081_11697512	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300032893\|Ga0335069_10063888	All Organisms → cellular organisms → Bacteria → Acidobacteria	4764	Open in IMG/M
3300032893\|Ga0335069_10456275	All Organisms → cellular organisms → Bacteria → Acidobacteria	1490	Open in IMG/M
3300032895\|Ga0335074_10022395	All Organisms → cellular organisms → Bacteria	8903	Open in IMG/M
3300032895\|Ga0335074_10274355	Not Available	1956	Open in IMG/M
3300032898\|Ga0335072_10001332	All Organisms → cellular organisms → Bacteria → Acidobacteria	40283	Open in IMG/M
3300032954\|Ga0335083_10000013	All Organisms → cellular organisms → Bacteria → Acidobacteria	540914	Open in IMG/M
3300033134\|Ga0335073_10329106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1820	Open in IMG/M
3300033433\|Ga0326726_10599570	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1059	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.77%
Aquatic	Environmental → Aquatic	30.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.99%
Freshwater	Environmental → Aquatic → Freshwater	27.13%
Sediment	Environmental → Aquatic → Sediment	3.10%
Peat	Environmental → Terrestrial → Peat	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	29.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.13%
Loam	Environmental → Terrestrial → Soil → Loam	5.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	26.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	17.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.10%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	20.16%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	17.05%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	14.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.43%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.10%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.10%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.10%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001100	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1	Environmental	Open in IMG/M
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100115213	3300000567	Peatlands Soil	MEILKDGSGKPQGIIRQIAGRQERLYTPAGEAIATYKSRTRATYDNNGLRIGSGNRLAGMVGEEEE*
JGI12703J13194_1077352	3300001100	Forest Soil	VILKDGAGNPQGVIRELAGNQERLYDLAGNAIATYRRNVNFTYDNNAVRFGSGNRLPGLVGTKP
JGI12695J13573_10001791	3300001180	Forest Soil	VILKDGAGNPQGVIRELAGNQERLYDLAGNAIATYRRNVNFTYDNNGVRFGSGNRLPGLGGQNRND*
JGI12635J15846_100183547	3300001593	Forest Soil	VILKDGAGNPQGVIRELAGNQERLYDLAGNAIATYRRNVNFTYDNNAVRFGSGNRLPGLVGTKPK*
JGI12635J15846_105003452	3300001593	Forest Soil	MEILKDGSGKPQGIIREIAGGQRRLYDRAGCSIATYRPNVNFTYGNDGVRIGSGDRLAGMVGEDEE*
Ga0062385_107849792	3300004080	Bog Forest Soil	VILKDGAGNHQGVIREIAGGQERLYDRAGNAVATYRRNVKFTYDNNGVRFGSGNRLAGMVGEDEE*
Ga0062387_1001226343	3300004091	Bog Forest Soil	MKTVILKDGAGNPQGVIREIAGGQERLYDRAGNAIATYRGDVNFTYDNNGVRFGSGNRLPGLVGTKPR*
Ga0062387_1014018561	3300004091	Bog Forest Soil	MEILKDGSGKPQGIIREIAGGQKRLYTSAGEALATYRPRTRATYDNNGSRIGTGDRLAGLIESEE*
Ga0062389_1022268852	3300004092	Bog Forest Soil	MEILRDKNGRPQGVIREIAGGQERLYDRAGNAIATYKPRTNYTYDNNASRIGSGNRLPGLVGTKPK*
Ga0066690_101998991	3300005177	Soil	KQQGIGRQIAGNEERLYDGSGNAMATYRSNGYTYDNAGVRIGSGNRLAGMVDSNEE*
Ga0070713_1007646141	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKSVILKDGAGNPQGVIREVAGRERLYDRSGASIATYRRNVDFTYDNNGTRFGSGNRLAGLVDDKE*
Ga0070711_1014985892	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LKDGAGNPQGVIREVAGGERLYDRSGASIATYRRNVDFTYDNNGTRFGSGNRLAGLVDDKE*
Ga0070732_1000028020	3300005542	Surface Soil	MEILKDKYGNPQGVIREVAGGRLRLYDRSGNSVATYRPDTDYTYDNNGSRIGSGNRLPGIAGDKK*
Ga0070732_107851611	3300005542	Surface Soil	MKTVILKDGAGNPQGVIRELPGGNERLYDCSGCSIATYRRNVDFTYDKNGVRLGSGNRLAGLVEDEE*
Ga0075029_1001168571	3300006052	Watersheds	MEILGDKHGKPQGTIREIAGDQERLYDRAGHTVATYRPNTNYTYDTNGTRIGSGNRLPGLVKNDK*
Ga0075029_1006812082	3300006052	Watersheds	MEILRDKNGKLQGVIRKIAGGQERLYDGAGNAIATYRPNVNYTYGNDGVRIGSGNRLPGMVDEGEE*
Ga0075015_1005629572	3300006102	Watersheds	MEILRDKNGKPQGTIREIAGGQERLYDRAGSAIATYRPNTNYTYDNNGVRIGSGNRLPGLVKNEK*
Ga0116222_12573232	3300009521	Peatlands Soil	MEILRDKNGRPQGVIREVAGGQERLYDRAGNAIATYRPRTNYTYDNNASRIGSGNRLPGLVGTKPK*
Ga0116221_10868053	3300009523	Peatlands Soil	MEILRDKFGKPQGIVREIAGGQERLYDNAGNAIATYHPNTNYTYDNNGARIGSGNRLPGLVETEKLALPRIQPRRWLG*
Ga0116221_12963212	3300009523	Peatlands Soil	MEILRDKNGRPEGVIREVAGGQERLYDRAGNAIATYRPRTNYTYDNNASRIGSGNRLPGLVGTKPK*
Ga0116221_14679841	3300009523	Peatlands Soil	DRNGKPQGVIREIAGAQQRLYDRAGNAIASYRPRTDYTYDNNGSRIGSGNRLPGLVGAKSK*
Ga0116225_10478624	3300009524	Peatlands Soil	MKTVVLKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLPGLVGTKPK*
Ga0116106_10203451	3300009645	Peatland	MKTVILKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLAGTVGEDEE*
Ga0116215_11654801	3300009672	Peatlands Soil	LMKTVILKDGAGNPQGVIREVAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLPGLVGTKPK*
Ga0116224_102483661	3300009683	Peatlands Soil	MEILRDKNGRPQGVIRKVAGGQERLYDRAGNAIATYRPRTNYTYDNNASRIGSGNRLPGLVGTKPK*
Ga0116216_101599471	3300009698	Peatlands Soil	MKTVVLKDGAGNPQGVIREVAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLPGLVGTKPK*
Ga0116219_102335072	3300009824	Peatlands Soil	MEILKDGSGKPQGIIRQIAGRQERLYTPAGEAIATYKSRTRATYDNNGLRIGSGNRLAG
Ga0116219_102371572	3300009824	Peatlands Soil	MKTVILKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLPGLVGTKPK*
Ga0116219_107499311	3300009824	Peatlands Soil	MEILRDKFGKPQGIVREIAGGQERLYDNAGNAIATYHPNTNCTYDNNGARIGSGNRLPGLVETEN*
Ga0116223_104256681	3300009839	Peatlands Soil	TRHMERLRDRNRAPQGTKREIAGGQERLYDRAGNAIATYRPRTDYTYDNNGSRIGSGNRLPGLVGAKSK*
Ga0074046_105040712	3300010339	Bog Forest Soil	MEILRDKNGKQQGTIREIAGGQERLYDRAGSAIATYRPNTNYTYDNNGVRIGSGNRLPGLVKNEK*
Ga0074046_108698571	3300010339	Bog Forest Soil	MKTVILKDGAGNPQGVIREIAGGQERLYDRAGNAIATYRGDVNFTYDNNGVRFGSGNRLPGLVGAKPR*
Ga0074045_110694862	3300010341	Bog Forest Soil	MKTVILKDGAGNPQGVIREIAGKQERLYDRTGNAIATYRRRTDHTYDNNGTRLGSGNRLAGMIDQDEE*
Ga0074044_100026342	3300010343	Bog Forest Soil	MEILRDKNGKPQGVIREIAGGQERLYDREGNAIATYRPRTDYTYDNNGSRIGSGNRLPGLVGTKPK*
Ga0074044_102695353	3300010343	Bog Forest Soil	EILRDKNGKLQGVIRKIAGGQERLYDGAGNAIATYRPNVNYTYGNDGVRIGSGNRLAGMIDQDGE*
Ga0074044_103897451	3300010343	Bog Forest Soil	MKSVILKDGAGNPQGVIREIAGGQERLYDRAGNAIATYRRDVNFTYDNNGVRFGSGNRLPGLVGTKPK*
Ga0136449_1001272393	3300010379	Peatlands Soil	MERLRDRNRAPQGTKREIAGGQERLYDRAGNAIATYRPRTDYTYDNNGSRIGSGNRLPGLVGAKSK*
Ga0136449_1002250725	3300010379	Peatlands Soil	DRNGKPQGLIRDFSGGQQRLYDRAGNAIASYRPRTDCTYDNNGCRIGSGNRLPGIVGTKPK*
Ga0136449_1002483201	3300010379	Peatlands Soil	MKTVVLKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLP
Ga0136449_1005828563	3300010379	Peatlands Soil	MEILRDKFGKPQGIVREIAGGQERLYDNAGNAIATYHPNTNYTYDNNGARIGSGNRLPGLVETEN*
Ga0136449_1015494742	3300010379	Peatlands Soil	MKTVILKDGAGNPQGVIREVAGDQERLYDRSGNAISTYRRNVNFTYENNGVRFGRAIACLG*
Ga0136449_1019486581	3300010379	Peatlands Soil	MEILRDKYGKQQGIIREIAGGQERLYDRAGRPIATYRPNTDYTYDNNGARTGSGNRLPGLAGDKPK*
Ga0181521_100038509	3300014158	Bog	MKTVILKDGAGNPQGVIRELSGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLPGLVGTKPK*
Ga0181530_100472191	3300014159	Bog	MKTVILKDGAGNPQGVIRELSGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGS
Ga0181532_100170944	3300014164	Bog	MKTVILKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLAGMVNQDEE*
Ga0182024_100474948	3300014501	Permafrost	MEILRDRNGNPQGMIPEIAGKQERLFDRSGNAIATYRRRAYHRYDNNGTRFSSGNRLAGIIDKDDE*
Ga0182024_100491603	3300014501	Permafrost	MEILRDKNGKPQGVIREIAGGQERLYDRAGNAIATYRQRTDYTYDNNGSRIGSGNRLPGLVGTKPK*
Ga0181515_13534241	3300016730	Peatland	MKTVILKDGAGNPQGVIRELSGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLAGMVNQDEE
Ga0187802_102018411	3300017822	Freshwater Sediment	MKTVILKDGAGNPQGVIREVAGGERLYDRSGASIATYRPNVDFTYVNNGTRFGSGNRLAGLVEDED
Ga0187818_100293572	3300017823	Freshwater Sediment	MEILKDKKGNPQGVIREIAGGWQRLYDRSGNAVATYRPRPDYTYDNNGSRIGSGNRLPGMAGNKK
Ga0187818_101138191	3300017823	Freshwater Sediment	MKPVILKDGAGNPQGVIREIAGGQERLYDRAGNAIATYRRNVNFTYDNNGVRFGSGNR
Ga0187818_102368802	3300017823	Freshwater Sediment	MKTVILKDGAGNPQGVIRELPGGDERLYDRSGAAIATFRARTGYTYDNNGARFGSGNRLAGLIDGQD
Ga0187818_102664291	3300017823	Freshwater Sediment	MKTVILKDGAGNPQGVIRELPGDQQRLYDCAGTAIATFRARTSFCYDNNGKRFGSGNRLAGLVDEQD
Ga0187818_104449061	3300017823	Freshwater Sediment	MKTVILKDGAGNPEGVIREIAGRKERLYNRSGNAIATYRRNVNFTYDNNGVRFGSGNRLAGLVEDDE
Ga0187818_105444322	3300017823	Freshwater Sediment	MEILRDKYGKPQGIIREIAGGQERLYDRAGHTIATYRPNTNYTYNNNGARVGSGNRLPGLVKNEK
Ga0187825_101830742	3300017930	Freshwater Sediment	MEILRDKNGKPQGVIREIAGGQKRLYDRTGRAVATYHPNTNYTYNNSGVRTGSGNRLPGLAADKPK
Ga0187801_100784881	3300017933	Freshwater Sediment	MKTLILKDGAGNPEAIILDLPGGQQRLCDRSGSTIATYRGRVDFTYDNNGSRIGSGNRLAGMAGEDAE
Ga0187801_101825262	3300017933	Freshwater Sediment	MKPVILKDGAGNPQGVIREIAGGQERLYDRAGNAIATYRRNVNFTYDNNGVRFGSGNRLAGLVEHKE
Ga0187801_102305222	3300017933	Freshwater Sediment	MKTVILKDAVGNPQAVIREVAGGNERLYDRSGNAIATYRRNVDFCYDNNGVRFGSGNRLAGLIDDSE
Ga0187854_102571282	3300017938	Peatland	MKTVILKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLAGTVGEDEE
Ga0187853_101811621	3300017940	Peatland	MKTVILKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRL
Ga0187819_104494951	3300017943	Freshwater Sediment	MKTMILKDGAGNPEGVIRELPGDQQRLYDCSGRSLATYRGRVDFCYDNNGKRFGSGNRLAGLVQDDE
Ga0187819_107307461	3300017943	Freshwater Sediment	NPKGDEKMEILRDKYGKPQGIIREIAGGQERLYDNAGNAVATYHPNTNYTYDNNGGRVGSGNRLPGLVPGEE
Ga0187819_107411421	3300017943	Freshwater Sediment	VRTVILKDGTGNPQGVIRELPDGNERLYDRSGSGIATYRRNVDFTYDNNGVRFGSGNRLAGLVEGED
Ga0187817_101456153	3300017955	Freshwater Sediment	MEILRDRNGKPQGVIREIAGGQQRLYDRAGYAIASYRPRTDYTYDNNGCRIGSGNRLPGTVGTKPK
Ga0187817_107234052	3300017955	Freshwater Sediment	MKTIILKDGAGNPQGVIREIAGGQERLYDRGGNAIATYRRKVNFTYDNNGVRFGSGNRLAGLVEDEE
Ga0187779_101391522	3300017959	Tropical Peatland	VEILRDKYGKPQGTIREIAGGQERLYDRAGNAIATYHPNTNFTYDNNGARVGSGNRLPGLVEDDK
Ga0187781_105775462	3300017972	Tropical Peatland	MKTVILKDGAGNPQGVIRQLPGDQERLYDRSGNSIATYRGRTNFTYDNNGARFGSGNRLAGLVEDDE
Ga0187782_100440853	3300017975	Tropical Peatland	MEILKDKYGNPQGVIREVAGGRLRLYDRSGNSVATYHPDTDYTYDNNGSRIGSGNRLPGMAGNKK
Ga0187804_101136342	3300018006	Freshwater Sediment	MKTLILKDGAGNPEAIIRDLPGDQQRLCDRSGSTIATYRGRVDFTYDNNGSRIGSGNRLAGMAGEDAE
Ga0187804_101472772	3300018006	Freshwater Sediment	MEILRDRNGKPQGVIREIAGGQQRLYDRAGYAIASYRPRTDYTYDNNGCRIGSGNRLPGIVGTKPK
Ga0187804_102539432	3300018006	Freshwater Sediment	MKTVILKDGAGNPQGVIREVAGGNERLYDRSGASIATWRRNVDYTYDNNGTRFGSGNRLAGLVEDQD
Ga0187810_100496884	3300018012	Freshwater Sediment	MEILKDKNGKPEGIIRGIAGGQDRLYDTAGNAIATHRPRVNFTHDNGGRRIGSGNRLAGMVRNKK
Ga0187810_101702541	3300018012	Freshwater Sediment	MEILKDKYGKPQGILREIAGGLERLYDRGGRSIATYRPQTDYTYDNNGSRMGSGNRLPGLAGTKPE
Ga0187810_103357312	3300018012	Freshwater Sediment	MEILRDKYGKPQGIIREIAGGQERLYDNAGNAIATYHPNTNYTYDNNGARIGSGNRLPGLVPSEK
Ga0187890_1000012536	3300018044	Peatland	MKTVILKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLAGMVNQDEE
Ga0187784_101991351	3300018062	Tropical Peatland	MEVLILKDGAGNPQGVIREVAGGNERLYDRSGASIATYRRDVNFTYDNNGARFGSGNRLAGLVEDD
Ga0187784_106348281	3300018062	Tropical Peatland	QMKTVILKDGAGNPQGVIREIAGGQERLCDRSGNAIATYRRNVNFTYDNNGVRFGNGNRLAGLVEVENNE
Ga0187784_107828642	3300018062	Tropical Peatland	MKTVILKDGAGNPQGVIREIAGGQERLCDRSGNAIATYRRNVNFTYDNNGVRFGNGDRLAGLVEVEDEE
Ga0187772_107979031	3300018085	Tropical Peatland	MKTVILKDGAGNPQGVIREVAGGNERLYDRSGGSIATYRRNVDFTYDNNGARFGSGNRLA
Ga0187771_100139724	3300018088	Tropical Peatland	MKAVILKDGAGNPQGVIRKVAGGNERLYDRSGGSIATYRRNVDFTYDNNGARLGSGNRLAGLVENKD
Ga0187771_106570802	3300018088	Tropical Peatland	MEILKDGVGKPQGIIREIAGGQTRLYTPAGEALATYRSRTRATYAINGTRIGTGDRLAGLVESEDE
Ga0182025_11022483	3300019786	Permafrost	MEILRDKNGKPQGVIREIAGGQERLYDRAGNAIATYRQRTDYTYDNNGSRIGSGNRLPGLVGTKPK
Ga0210407_101736711	3300020579	Soil	MKNVILKDGAGNPQGVIREVAGGNERLYDPSGASLATWRSNVDYTYNNNGARVGSGNRLPGIVSGDED
Ga0210399_1000003338	3300020581	Soil	MEILRDRNGKPQGMFREIAGGQQRRYDRAGNAIASYRPRTDYTYDNNGCRIGSGNRLPGIVGTKPR
Ga0210406_109559311	3300021168	Soil	MEILRDKNGKPQGVIREIAGGQERLYDRAGRPVAIYRPNTDYTYDNNGVRTGSGNRLPGLAGNKPK
Ga0210400_109847121	3300021170	Soil	MEILKDGSGKPQGIIREIAGGQRRLYDRAGCSIATYRPNVNFTYGNDGVRIGSGDRLAGMVGEDEE
Ga0210397_115231121	3300021403	Soil	MEILRDRNGKPQGMFREIAGGLQRRYDRAGNAIASYRPRTDYTYDNNGCRIGSGNRLPGIVGTKPR
Ga0224563_10109062	3300022731	Soil	MEILRDKYGKPQGTIREIAGGQQRLYDNAGQAIATYRPNVNFTYDNNGVRIGSGNRLAGLIEDDE
Ga0209904_10128801	3300027394	Thawing Permafrost	MKPVILKDGAGNPQGVIRELAGDQERLYDRAGNAIATYRRNVNFTYDNNGVRFGSGNRLAGLVEHEE
Ga0209332_10014756	3300027439	Forest Soil	VILKDGAGNPQGVIRELAGNQERLYDLAGNAIATYRRNVNFTYDNNAVRFGSGNRLPGLVGTKPK
Ga0208043_10656291	3300027570	Peatlands Soil	MEILRDKNGRPQGVIREVAGGQERLYDRAGNAIATYRPRTNYTYDNNASRIGSGNRLPGLVGTKPK
Ga0209448_100237191	3300027783	Bog Forest Soil	MEILKDGSGKPQGIIREIAGGQKRLYTSAGEALATYRPRTRATYDNNGSRIGTGDRLAGLIESEE
Ga0209580_1000046313	3300027842	Surface Soil	MEILKDKYGNPQGVIREVAGGRLRLYDRSGNSVATYRPDTDYTYDNNGSRIGSGNRLPGIAGDKK
Ga0209580_102721732	3300027842	Surface Soil	MKTVILKDGAGNPQGVIRELPGGNERLYDCSGCSIATYRRNVDFTYDKNGVRLGSG
Ga0209517_100605785	3300027854	Peatlands Soil	MKTVILKDGAGNPQGVIREVAGDQERLYDRSGNAISTYRRNVNFTYEN
Ga0209517_100672131	3300027854	Peatlands Soil	MKTVVLKDGAGNPQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLPGLVGTKPK
Ga0209067_108880321	3300027898	Watersheds	MEILGDKHGKPQGTIREIAGDQERLYDRAGHTVATYRPNTNYTYDTNGTRIGSGNRLPGLVKNDK
Ga0316363_100209503	3300030659	Peatlands Soil	MEILKDGSGKPQGIIRQIAGRQERLYTPAGEAIATYKSRTRATYDNNGLRIGSGNRLAGMVGEEEE
Ga0310039_102917751	3300030706	Peatlands Soil	PQGVIRELAGDQERLYDRSGNAIATYRRNVNFTYDNNGVRFGSGNRLPGLVGTKPK
Ga0307474_113736912	3300031718	Hardwood Forest Soil	MEILRDKNGKPQGVIREIAGGQERLYDRAGRPIAIYRPNTDYTYDNNGVRTGSGNRLSGLAGNKPK
Ga0307475_109621271	3300031754	Hardwood Forest Soil	LKDGAGNPQGVIRELPGGNERLYDCSGCSIATYRRNVDFTYDKNGVRLGSGNRLAGLVEDEE
Ga0307479_1000288018	3300031962	Hardwood Forest Soil	VQILRDRNGKLQGVIREIAGHEQRLYDGTGNALATYRRNGYTYDNEGVRIGSGNRLAGLVDDEEN
Ga0307479_105071681	3300031962	Hardwood Forest Soil	MKTVILKDGAGNPQGVIRELPGGNERLYDCSGCSIATYRRNVDFTYDKNGVRLGSGNRLAGLVEDEE
Ga0307479_114509462	3300031962	Hardwood Forest Soil	VEILRDKNGKQQGTIREIAGGQERLYDRAGSAIATYRPNTNYTYDNNGVRIGSGNR
Ga0311301_100936648	3300032160	Peatlands Soil	MEILRDKFGKPQGIVREIAGGQERLYDNAGNAIATYHPNTNYTYDNNGARIGSGNRLPGLVETEKLALPRIQPRRWLG
Ga0311301_110286732	3300032160	Peatlands Soil	MKTVILKDGAGNPQGVIREVAGDQERLYDRSGNAISTYRRNVNFTYENNGVRFGRAIACL
Ga0307471_1005777272	3300032180	Hardwood Forest Soil	VEILRDKNGKQQGTIREIAGGQERLYDRAGSAIATYRPNTNYTYDNNGVRIGSGNRLPGLVKDKK
Ga0307472_1018916651	3300032205	Hardwood Forest Soil	MEILKDGSGKPQGIIREIAGEQKRLYDRAGRSIATYRPNVNFTYGNDGVRIGSGNRLADMIGDNEE
Ga0335085_100007984	3300032770	Soil	MKTVILKDGAGNPQGVIREVAGGNERLYDRSGASIATWRRNVDYTYDNNGARFGSGNRLAGLIEHED
Ga0335085_1001881119	3300032770	Soil	MEILRDKNGNQQGIIREIAGGQERLYDRAGHASATYRPNTNYTYDNNGVRIGSGNRLPGLAKDGK
Ga0335082_101152423	3300032782	Soil	MKPVILKDSVGKPQGVIREVAGGNQRLYDRSGSSIATYRRIVDFTYDNGGRRLGTGDRLAGLVDD
Ga0335082_114769412	3300032782	Soil	NGNQQGIIREIAGGQERLYDRAGHASATYRPNTNYTYDNNGVRIGSGNRLPGLAKDGK
Ga0335082_115048571	3300032782	Soil	VQILRDRNGKLEGVVREIAGQEERLYDASGKAMATYRRNGYTYDNAGVRIGSGNRLAGLIGEDEE
Ga0335079_101662894	3300032783	Soil	MKTVILKDGAGNPQGVIRDLPGDQQRLYDRSGNSVATYRGRTNFTYDNNGVRFGSGNRLAGLVDEQD
Ga0335079_103590803	3300032783	Soil	MEILRDKNGKPQGVLREIAGGQQRLYDRAGNAIASYRPRTDYTYDNKGSRIGSGNRLPGLVRDETKMTRI
Ga0335079_120157562	3300032783	Soil	MEILRDKNGKPQGTIREIAGGQERLYDRTGHTIATYRPNTNYTYDNDGARVGSGNRLPGLVKDEK
Ga0335078_1002037219	3300032805	Soil	MKTVILKDGAGNPQGVIRELPDDQQRLSDRSGNSIATYRRRTDFTYDNNGARFGSGNRLAGLLENED
Ga0335078_110954992	3300032805	Soil	MKILRDKNGKPQGVIRDIAGGQERLYDRAGRPIAIYRPNTDYTYDNLGVRTGSGNRLPGLAGNKPK
Ga0335078_114550752	3300032805	Soil	MKTVILKDGAGKPQGVIREVAGGNERLYDRSGASVGTWRRNVDYTYDNNGARFGSGNRLAGQVTGDEE
Ga0335081_116975121	3300032892	Soil	LRDKNGKPQGTIREIAGGQERLYDRTGHTIATYRPNTNYTYDNDGARVGSGNRLPGLVKNEK
Ga0335069_100638885	3300032893	Soil	MKTKTVILKDAVGNPQAVIREVAGGNERLYDRSGNAIATYRRNVDFCYDNNGARFGSGNRLAGLIDDSE
Ga0335069_104562752	3300032893	Soil	MKNVILKDGAGNPQGVIRELPGDQQRLSDRSGNSIATYRRRTDFTYDNNGARFGSGNRLAGLVEDQD
Ga0335074_100223953	3300032895	Soil	MKTVVLKDGAGNPQGVIRDLPGDQQRLYDRSGTSIATYRRRTDFTYDNNGTRFGSGNRLAGLVEDED
Ga0335074_102743553	3300032895	Soil	MKTVILKDGAGNPQGVIRDLPGDQQRLYDRSGSSVATYRGRTNFTYDNNGVRFGSGNRLAGLVDEQD
Ga0335072_100013327	3300032898	Soil	MKTVVLKDGAGNPQGVIRDLPGDQQRLYDRSGNSIATYRRRTDFTYDNNGTRFGSGNRLAGLVEDED
Ga0335083_10000013262	3300032954	Soil	MKPVILKDSVGKPQGVIREVAGGNQRLYDRSGSSIATYRRIVDFTYDNGGRRLGTGDRLAGPVDD
Ga0335073_103291062	3300033134	Soil	MKAVILKDGAGNPQAVVREIAGGNERLYDRSGASIATWRRNVDYTYDNNGARFGSGNRLAGLVDDQD
Ga0326726_105995702	3300033433	Peat Soil	MKPVILKDGAGNPQGVIRELAGDQERLYDRAGNAIATYRRNVNFTYDNNGVRFGSGNRLAGLVEDEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064182

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences